Pregenerated sensors for MOS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078365Ensembl transcript IDs: ENSMUST00000105158.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATCTGCACCCGGCCTCTaGAGGGCGCGGGCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLSAPGL*RARASQ Trigger: CTGGGAGGCCCGCGCCCTGCAGAGGCCGGGTGCAGA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACAGTCAGGGAGGCGGTaGACACCGCCCCTGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLQSGRR*TPPLPV Trigger: CACTGGCAGGGGCGGTGTTCACCGCCTCCCTGACTG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGCTGAGAGGCTCCGGTaGGCGGGTGGCACCGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLAERLR*AGGTVD Trigger: ATCTACGGTGCCACCCGCTCACCGGAGCCTCTCAGC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACTTCGGGCGTGCGCGTaGTGGCAGCCACAACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLLRACA*WQPQPE Trigger: TTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGAAG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACGGCACCGCAGATCCTaGAGCTTCTGGGAGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLRHRRS*SFWEQP Trigger: CGGCTGCTCCCAGAAGCTGCAGGATCTGCGGTGCCG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACGGGCGTGCGCGTGCTaGCAGCCACAACCCGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLRACAC*QPQPEL Trigger: TAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGTTGTTCTCTGCAGCTaGGAGGCTCCGGTGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLVVLCS*EAPVSG Trigger: CCCGCTCACCGGAGCCTCTCAGCTGCAGAGAACAAC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATGGAGTCTTCGGGCGTaGGCGTGCTGGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLWSLRA*ACWQPQ Trigger: TTGTGGCTGCCAGCACGCGCACGCCCGAAGACTCCA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACCTTTGGAGCAGTTCTaGACCCGGCCTCTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLPLEQF*TRPLQG Trigger: GCCCTGCAGAGGCCGGGTGCAGAACTGCTCCAAAGG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACAGGAAGAGCTTCCCTaGCTTCCTCGGGGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLQEELP*LPRGHQ Trigger: TTGGTGGCCCCGAGGAAGGCAGGGAAGCTCTTCCTG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACTTGGTGCGTGTACGTaGCCCCTATGTGGTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLLGACT*PLCGEG Trigger: CCCCTCACCACATAGGGGGCACGTACACGCACCAAG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACCTGTTCCCAGTCTATaGAGAACCAGGCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLPVPSL*RTRPAG Trigger: GCCGGCTGGCCTGGTTCTCCATAGACTGGGAACAGG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATGGTACCTAGGCTGTTaGAGTCTTCGGGCGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLWYLGC*SLRACA Trigger: CGCGCACGCCCGAAGACTCCAACAGCCTAGGTACCA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACCCCTCGGAAAGCCTTaGGGTCCCTTTGGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLPLGKP*GPFGAV Trigger: AACTGCTCCAAAGGGACCTCAAGGCTTTCCGAGGGG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGCCCAGAAACTCCGCTaGGATGCACGTAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLAQKLR*DARRSL Trigger: CAAGGACCTACGTGCATCCCAGCGGAGTTTCTGGGC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAAGTAAGGCACCTCCCTaGTGGTCATCTGCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLSKAPP*WSSATG Trigger: CCCTGTGGCAGATGACCACCAGGGAGGTGCCTTACT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGGGTGGCACCGTAGATaGCTTGGTGTAGAGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLGWHRR*LGVESR Trigger: ACGTGACTCTACACCAAGTCATCTACGGTGCCACCC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGCCTCCCAGCAGCTCTaGATGATGTTCTGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLASQQL*MMFCSV Trigger: GACACTGCAGAACATCATCCAGAGCTGCTGGGAGGC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACCAGAGCCCAGCCTATaGATCAGACATACCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLPEPSL*IRHTCS Trigger: GGAACAGGTATGTCTGATGCATAGGCTGGGCTCTGG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATGCCCCCAAACTCCATaGTTATGGTACCTAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLCPQTP*LWYLGC Trigger: ACAGCCTAGGTACCATAATCATGGAGTTTGGGGGCA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAACTTGTTTACTTGCTTaGTGGCCACAGGAACACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLTCLLA*WPQEHR Trigger: ACGGTGTTCCTGTGGCCATCAAGCAAGTAAACAAGT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGTGCAAAATGCTTTGTaGGTGGAGAAAAAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLVQNAL*VEKKQA Trigger: GGCCTGCTTTTTCTCCACTCACAAAGCATTTTGCAC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAAGCAGCCGAAGTCACTaGTCTTACAAACGTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLSSRSH*SYKRLA Trigger: AGCAAGACGTTTGTAAGATCAGTGACTTCGGCTGCT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGGCTTCAGGTCCAAGTaGAAAATGCTTTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLGFRSK*KMLCEW Trigger: CCACTCACAAAGCATTTTGCACTTGGACCTGAAGCC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAATTGTAGGCAACCACTaGATACTGCACGTACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLIVGNH*ILHVLR Trigger: CCTCAGTACGTGCAGTATGCAGTGGTTGCCTACAAT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGAACACCGTGGTAAGTaGCTTTATACACCGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLEHRGK*LYTPSQ Trigger: TTGGCTCGGTGTATAAAGCCACTTACCACGGTGTTC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAAGTAGATGTCAGCTTTaGGCGTGGCAATCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLSRCQL*AWQSLL Trigger: AAGGAGAGATTGCCACGCCCAAAGCTGACATCTACT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAAAACGTCTTGCTCACTaGTCAAAATGTTCGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLKRLAH*SKCSLA Trigger: AGCCAGCGAACATTTTGATCAGTGAGCAAGACGTTT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGTGCACTTGTTTACTTaGTTGATGGCCACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLVHLFT*LMATGT Trigger: TGTTCCTGTGGCCATCAAGCAAGTAAACAAGTGCAC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGATCAAAATGTTCGCTaGCTTCAGGTCCAAGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLDQNVR*LQVQVQ Trigger: TTGCACTTGGACCTGAAGCCAGCGAACATTTTGATC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAATCTTACAAACGTCTTaGTCACTGATCAAAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: LYFLKICPSGMFSSTPSLILQTS*SLIKMF Trigger: GAACATTTTGATCAGTGAGCAAGACGTTTGTAAGAT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 90 bp | AGAACCAGGCCAGCCGGCGTGGCAGTCCGGGAGCCCGAGGAGGAGTaGTCCCCAGGAAGAGCTTCCCTGCCTTCCTCGGGGCCACCAAAG | + |
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Preference number: 5 (lower is better) Translates to: RTRPAGVAVREPEEE*SPGRASLPSSGPPK Trigger: CTTTGGTGGCCCCGAGGAAGGCAGGGAAGCTCTTCCTGGGGACCACTCCTCCTCGGGCTCCCGGACTGCCACGCCGGCTGGCCTGGTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 90 bp | CCAGGAAGAGCTTCCCTGCCTTCCTCGGGGCCACCAAAGGAATGCTaGAGGACCGCGAGTCCACCGATGGCGACAGCTCACGAGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PGRASLPSSGPPKEC*RTASPPMATAHEGG Trigger: ACCTCCCTCGTGAGCTGTCGCCATCGGTGGACTCGCGGTCCTGCAGCATTCCTTTGGTGGCCCCGAGGAAGGCAGGGAAGCTCTTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 90 bp | TCCCCAGGAAGAGCTTCCCTGCCTTCCTCGGGGCCACCAAAGGAATaGTGCAGGACCGCGAGTCCACCGATGGCGACAGCTCACGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPGRASLPSSGPPKE*CRTASPPMATAHEG Trigger: TCCCTCGTGAGCTGTCGCCATCGGTGGACTCGCGGTCCTGCAGCATTCCTTTGGTGGCCCCGAGGAAGGCAGGGAAGCTCTTCCTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 90 bp | CGGAAAGCCTTGAGGTCCCTTTGGAGCAGTTCTGCACCCGGCCTCTaGAGGGCGCGGGCCTCCCAGCAGCTCTGGATGATGTTCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RKALRSLWSSSAPGL*RARASQQLWMMFCS Trigger: ACTGCAGAACATCATCCAGAGCTGCTGGGAGGCCCGCGCCCTGCAGAGGCCGGGTGCAGAACTGCTCCAAAGGGACCTCAAGGCTTTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 90 bp | CAGACATACCTGTTCCCAGTCTATGGAGAACCAGGCCAGCCGGCGTaGCAGTCCGGGAGCCCGAGGAGGAGTGGTCCCCAGGAAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QTYLFPVYGEPGQPA*QSGSPRRSGPQEEL Trigger: AAGCTCTTCCTGGGGACCACTCCTCCTCGGGCTCCCGGACTGCCACGCCGGCTGGCCTGGTTCTCCATAGACTGGGAACAGGTATGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 90 bp | CTCCAGAGCCCAGCCTATGCATCAGACATACCTGTTCCCAGTCTATaGAGAACCAGGCCAGCCGGCGTGGCAGTCCGGGAGCCCGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LQSPAYASDIPVPSL*RTRPAGVAVREPEE Trigger: CTCCTCGGGCTCCCGGACTGCCACGCCGGCTGGCCTGGTTCTCCATAGACTGGGAACAGGTATGTCTGATGCATAGGCTGGGCTCTGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 90 bp | TGGCAATCTCTCCTTTCAGGATCTCCGGAGCTTGGTGCGTGTACGTaGCCCCTATGTGGTGAGGGGACGCCTGCCGGCACCGCAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: WQSLLSGSPELGACT*PLCGEGTPAGTADP Trigger: AGGATCTGCGGTGCCGGCAGGCGTCCCCTCACCACATAGGGGGCACGTACACGCACCAAGCTCCGGAGATCCTGAAAGGAGAGATTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 90 bp | TCGGGCGTGCGCGTGCTGGCAGCCACAACCCGAACTATGTTGTCGTaGCGTAGTCTTGCAATGTTCAGTTCAGCCCAGAAACTCCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SGVRVLAATTRTMLS*RSLAMFSSAQKLRW Trigger: CCAGCGGAGTTTCTGGGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS TCA 90 bp | GTTCGCCGGAGTAAGGCACCTCCCTGGTGGTCATCTGCCACAGGGTaGTTCCAAAAGAGTAGATGTCAGCTTTGGGCGTGGCAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VRRSKAPPWWSSATG*FQKSRCQLWAWQSL Trigger: GAGAGATTGCCACGCCCAAAGCTGACATCTACTCTTTTGGAATCACCCTGTGGCAGATGACCACCAGGGAGGTGCCTTACTCCGGCGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS TCA 90 bp | TCCGCTGGGATGCACGTAGGTCCTTGGTGCACTTGTTTACTTGCTTaGTGGCCACAGGAACACCGTGGTAAGTGGCTTTATACACCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SAGMHVGPWCTCLLA*WPQEHRGKWLYTPS Trigger: GCTCGGTGTATAAAGCCACTTACCACGGTGTTCCTGTGGCCATCAAGCAAGTAAACAAGTGCACCAAGGACCTACGTGCATCCCAGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAATGGTACCTAGGCTGTaGGAGTCTTCGGGCGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLMVPRL*ESSGVR Trigger: GCGCACGCCCGAAGACTCCAACAGCCTAGGTACCAT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATGTCGTGGCGTAGTCTaGCAATGTTCAGTTCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLCRGVV*QCSVQP Trigger: GGGCTGAACTGAACATTGCAAGACTACGCCACGACA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACTTCCCCAAACTCAGTaGTTCTCTGCAGCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLLPQTQ*FSAAER Trigger: CCTCTCAGCTGCAGAGAACAACTGAGTTTGGGGAAG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTACACTTGTTTACTTGCTaGATGGCCACAGGAACACCG | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLHLFTC*MATGTP Trigger: CGGTGTTCCTGTGGCCATCAAGCAAGTAAACAAGTG...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGGTGCACTTGTTTACTaGCTTGATGGCCACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLGALVY*LDGHRN Trigger: GTTCCTGTGGCCATCAAGCAAGTAAACAAGTGCACC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAAGGTCCTTGGTGCACTaGTTTACTTGCTTGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLRSLVH*FTCLMA Trigger: GGCCATCAAGCAAGTAAACAAGTGCACCAAGGACCT...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGATGCACGTAGGTCCTaGGTGCACTTGTTTACTTGC | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLDARRS*VHLFTC Trigger: GCAAGTAAACAAGTGCACCAAGGACCTACGTGCATC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTATGGTGTAGAGTCACGTaGCCCCCAAACTCCATGATT | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLWCRVT*PPNSMI Trigger: AATCATGGAGTTTGGGGGCAACGTGACTCTACACCA...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCTAAAAATATGCCCTAGTGGTATGTTTTCTTCCACACCATCCTTAGATCTTACAAACGTCTaGCTCACTGATCAAAATGTT | + |
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Preference number: 5 (lower is better) Translates to: LYFLKICPSGMFSSTPSLDLTNV*LTDQNV Trigger: AACATTTTGATCAGTGAGCAAGACGTTTGTAAGATC...TAAGGATGGTGTGGAAGAAAACATACCACTAGGGCATATTTTTAGGAAATAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | CCAGCCGGCGTGGCAGTCCGGGAGCCCGAGGAGGAGTaGTCCCCAGGAAGAGCTTCCCTGCCTTCCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PAGVAVREPEEE*SPGRASLPSSG Trigger: CCCCGAGGAAGGCAGGGAAGCTCTTCCTGGGGACCACTCCTCCTCGGGCTCCCGGACTGCCACGCCGGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | CCCTCGGAAAGCCTTGAGGTCCCTTTGGAGCAGTTCTaGACCCGGCCTCTGCAGGGCGCGGGCCTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PSESLEVPLEQF*TRPLQGAGLPA Trigger: TGCTGGGAGGCCCGCGCCCTGCAGAGGCCGGGTGCAGAACTGCTCCAAAGGGACCTCAAGGCTTTCCGAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | CTGTTCCCAGTCTATGGAGAACCAGGCCAGCCGGCGTaGCAGTCCGGGAGCCCGAGGAGGAGTGGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFPVYGEPGQPA*QSGSPRRSGPQ Trigger: CTGGGGACCACTCCTCCTCGGGCTCCCGGACTGCCACGCCGGCTGGCCTGGTTCTCCATAGACTGGGAACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | CAGCCTAGTGCCCCTCGGAAAGCCTTGAGGTCCCTTTaGAGCAGTTCTGCACCCGGCCTCTGCAGGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QPSAPRKALRSL*SSSAPGLCRAR Trigger: CCGCGCCCTGCAGAGGCCGGGTGCAGAACTGCTCCAAAGGGACCTCAAGGCTTTCCGAGGGGCACTAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS TCA 72 bp | GCCTCTGCAGGGCGCGGGCCTCCCAGCAGCTCTGGATaGTGTTCTGCAGTGTCTTTCCAGTCAGGGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ASAGRGPPSSSG*CSAVSFQSGRR Trigger: CCGCCTCCCTGACTGGAAAGACACTGCAGAACATCATCCAGAGCTGCTGGGAGGCCCGCGCCCTGCAGAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | GCTTCCCTGCCTTCCTCGGGGCCACCAAAGGAATGCTaGAGGACCGCGAGTCCACCGATGGCGACAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ASLPSSGPPKEC*RTASPPMATAH Trigger: GTGAGCTGTCGCCATCGGTGGACTCGCGGTCCTGCAGCATTCCTTTGGTGGCCCCGAGGAAGGCAGGGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | CTCCTTTCAGGATCTCCGGAGCTTGGTGCGTGTACGTaGCCCCTATGTGGTGAGGGGACGCCTGCCGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LLSGSPELGACT*PLCGEGTPAGT Trigger: GGTGCCGGCAGGCGTCCCCTCACCACATAGGGGGCACGTACACGCACCAAGCTCCGGAGATCCTGAAAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | TTGAGGTCCCTTTGGAGCAGTTCTGCACCCGGCCTCTaGAGGGCGCGGGCCTCCCAGCAGCTCTGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: LRSLWSSSAPGL*RARASQQLWMM Trigger: CATCATCCAGAGCTGCTGGGAGGCCCGCGCCCTGCAGAGGCCGGGTGCAGAACTGCTCCAAAGGGACCTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | CCCGGCCTCTGCAGGGCGCGGGCCTCCCAGCAGCTCTaGATGATGTTCTGCAGTGTCTTTCCAGTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PGLCRARASQQL*MMFCSVFPVRE Trigger: CTCCCTGACTGGAAAGACACTGCAGAACATCATCCAGAGCTGCTGGGAGGCCCGCGCCCTGCAGAGGCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | AGAGCTTCCCTGCCTTCCTCGGGGCCACCAAAGGAATaGTGCAGGACCGCGAGTCCACCGATGGCGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: RASLPSSGPPKE*CRTASPPMATA Trigger: AGCTGTCGCCATCGGTGGACTCGCGGTCCTGCAGCATTCCTTTGGTGGCCCCGAGGAAGGCAGGGAAGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | AGCCCGAGGAGGAGTGGTCCCCAGGAAGAGCTTCCCTaGCTTCCTCGGGGCCACCAAAGGAATGCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPRRSGPQEELP*LPRGHQRNAAG Trigger: TCCTGCAGCATTCCTTTGGTGGCCCCGAGGAAGGCAGGGAAGCTCTTCCTGGGGACCACTCCTCCTCGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | GTCAGCTTTGGGCGTGGCAATCTCTCCTTTCAGGATCTCCGGAGCTaGGTGCGTGTACGTGCCCCCTATGTGGTGAGGGGACGCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: VSFGRGNLSFQDLRS*VRVRAPYVVRGRLP Trigger: CGGCAGGCGTCCCCTCACCACATAGGGGGCACGTACACGCACCAAGCTCCGGAGATCCTGAAAGGAGAGATTGCCACGCCCAAAGCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | AGGGCGCGGGCCTCCCAGCAGCTCTGGATGATGTTCTaGAGTGTCTTTCCAGTCAGGGAGGCGGTGAACACC | + |
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Preference number: 6 (lower is better) Translates to: RARASQQLWMMF*SVFPVREAVNT Trigger: GGTGTTCACCGCCTCCCTGACTGGAAAGACACTGCAGAACATCATCCAGAGCTGCTGGGAGGCCCGCGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | TGGTACCTAGGCTGTTGGAGTCTTCGGGCGTGCGCGTaGTGGCAGCCACAACCCGAACTATGTTGTCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WYLGCWSLRACA*WQPQPELCCRG Trigger: GCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGAAGACTCCAACAGCCTAGGTACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | GGGGACGCCTGCCGGCACCGCAGATCCTGCAGCTTCTaGGAGCAGCCGAAGTCACTGATCTTACAAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: GDACRHRRSCSF*EQPKSLILQTS Trigger: AGACGTTTGTAAGATCAGTGACTTCGGCTGCTCCCAGAAGCTGCAGGATCTGCGGTGCCGGCAGGCGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 72 bp | GGGCGTGGCAATCTCTCCTTTCAGGATCTCCGGAGCTaGGTGCGTGTACGTGCCCCCTATGTGGTGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GRGNLSFQDLRS*VRVRAPYVVRG Trigger: TCCCCTCACCACATAGGGGGCACGTACACGCACCAAGCTCCGGAGATCCTGAAAGGAGAGATTGCCACGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | TACCTAGGCTGTTGGAGTCTTCGGGCGTGCGCGTGCTaGCAGCCACAACCCGAACTATGTTGTCGTGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: YLGCWSLRACAC*QPQPELCCRGV Trigger: TACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGAAGACTCCAACAGCCTAGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | AGAGTCACGTTGCCCCCAAACTCCATGATTATGGTACCTAGGCTGTaGGAGTCTTCGGGCGTGCGCGTGCTGGCAGCCACAACCCGAACT | + |
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Preference number: 6 (lower is better) Translates to: RVTLPPNSMIMVPRL*ESSGVRVLAATTRT Trigger: AGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGAAGACTCCAACAGCCTAGGTACCATAATCATGGAGTTTGGGGGCAACGTGACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 72 bp | GGCGTGCGCGTGCTGGCAGCCACAACCCGAACTATGTaGTCGTGGCGTAGTCTTGCAATGTTCAGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVRVLAATTRTM*SWRSLAMFSSA Trigger: GGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | GAGTCTTCGGGCGTGCGCGTGCTGGCAGCCACAACCCGAACTATGTaGTCGTGGCGTAGTCTTGCAATGTTCAGTTCAGCCCAGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: ESSGVRVLAATTRTM*SWRSLAMFSSAQKL Trigger: GAGTTTCTGGGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCGCACGCCCGAAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | GCGTGCTGGCAGCCACAACCCGAACTATGTTGTCGTGGCGTAGTCTaGCAATGTTCAGTTCAGCCCAGAAACTCCGCTGGGATGCACGTA | + |
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Preference number: 6 (lower is better) Translates to: ACWQPQPELCCRGVV*QCSVQPRNSAGMHV Trigger: TACGTGCATCCCAGCGGAGTTTCTGGGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | CGCGTGCTGGCAGCCACAACCCGAACTATGTTGTCGTaGCGTAGTCTTGCAATGTTCAGTTCAGCCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVLAATTRTMLS*RSLAMFSSAQK Trigger: TTTCTGGGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTGCCAGCACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 72 bp | AAACTCCGCTGGGATGCACGTAGGTCCTTGGTGCACTaGTTTACTTGCTTGATGGCCACAGGAACACCGTGG | + |
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Preference number: 6 (lower is better) Translates to: KLRWDARRSLVH*FTCLMATGTPW Trigger: CCACGGTGTTCCTGTGGCCATCAAGCAAGTAAACAAGTGCACCAAGGACCTACGTGCATCCCAGCGGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 72 bp | TCAGCCCAGAAACTCCGCTGGGATGCACGTAGGTCCTaGGTGCACTTGTTTACTTGCTTGATGGCCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SAQKLRWDARRS*VHLFTCLMATG Trigger: TCCTGTGGCCATCAAGCAAGTAAACAAGTGCACCAAGGACCTACGTGCATCCCAGCGGAGTTTCTGGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 72 bp | CAGCCACAACCCGAACTATGTTGTCGTGGCGTAGTCTaGCAATGTTCAGTTCAGCCCAGAAACTCCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPQPELCCRGVV*QCSVQPRNSAG Trigger: CCCAGCGGAGTTTCTGGGCTGAACTGAACATTGCAAGACTACGCCACGACAACATAGTTCGGGTTGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | ATGTTCAGTTCAGCCCAGAAACTCCGCTGGGATGCACGTAGGTCCTaGGTGCACTTGTTTACTTGCTTGATGGCCACAGGAACACCGTGG | + |
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Preference number: 6 (lower is better) Translates to: MFSSAQKLRWDARRS*VHLFTCLMATGTPW Trigger: CCACGGTGTTCCTGTGGCCATCAAGCAAGTAAACAAGTGCACCAAGGACCTACGTGCATCCCAGCGGAGTTTCTGGGCTGAACTGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS GCA 72 bp | TTATACACCGAGCCAAACCCTCCAGAGCCCAGCCTATaGATCAGACATACCTGTTCCCAGTCTATGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LYTEPNPPEPSL*IRHTCSQSMEN Trigger: GTTCTCCATAGACTGGGAACAGGTATGTCTGATGCATAGGCTGGGCTCTGGAGGGTTTGGCTCGGTGTATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CCA 72 bp | AGTCTTGCAATGTTCAGTTCAGCCCAGAAACTCCGCTaGGATGCACGTAGGTCCTTGGTGCACTTGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: SLAMFSSAQKLR*DARRSLVHLFT Trigger: AGTAAACAAGTGCACCAAGGACCTACGTGCATCCCAGCGGAGTTTCTGGGCTGAACTGAACATTGCAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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| CDS CAA 90 bp | TGTGAGTGGAGAAAAAGCAGGCCGTTAACAACATCTAGGGAATACTaGAGGCACTTCCCCAAACTCAGTTGTTCTCTGCAGCTGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CEWRKSRPLTTSREY*RHFPKLSCSLQLRG Trigger: GCCTCTCAGCTGCAGAGAACAACTGAGTTTGGGGAAGTGCCTCAAGTATTCCCTAGATGTTGTTAACGGCCTGCTTTTTCTCCACTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105158.2 |
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