RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORN5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026894

Ensembl transcript IDs: ENSMUST00000028256.5

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp GACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTGAGACGAATCGGCTCCCACTaGGGAAGAACAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DYSQFPRPAVGRRKSLVRRIGSH*GRTGFL
Trigger: AAGGAACCCTGTTCTTCCCCAGTGGGAGCCGATTCG...TCTCACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR GCA 90 bp CTAGGACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTTGTTTGTCCTCATACTaGAGCCCATCATTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LGLQPVSQASSGQKEVPGCLSSY*SPSLKV
Trigger: TACCTTCAATGATGGGCTGCAGTATGAGGACAAACA...ACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR TCA 90 bp ATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCAGCAGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCA +
Preference number: 4 (lower is better)
Translates to: ILKLKSKLGLQPVSQASSELRDT*GLQAIA
Trigger: TGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTC...ACTGCTGGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR CCA 90 bp ACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCATCCCTTCTTCCAGATaGCGTCGAATCGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TFILKLKSKLGLQPVSQAIPSSR*RRIGSH
Trigger: GTGGGAGCCGATTCGACGCCATCTGGAAGAAGGGAT...GGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR GCA 90 bp GGCTGTTCAGTGCAGAAAACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTAGGATGTACTCGGCACTaGCCTCCATCCTCCCGTTTA +
Preference number: 4 (lower is better)
Translates to: GCSVQKTFILKLKSKLGLGCTRH*PPSSRL
Trigger: TAAACGGGAGGATGGAGGGCAGTGCCGAGTACATCC...TAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGTTTTCTGCACTGAACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR CAA 90 bp GACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTGAGAACTTCTGTTTGGGCATaGGCAACCAGCCCTTGCGGC +
Preference number: 5 (lower is better)
Translates to: DYSQFPRPAVGRRKSLVRTSVWA*ATSPCG
Trigger: GCCGCAAGGGCTGGTTGCCAATGCCCAAACAGAAGT...TCTCACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 90 bp GGGAATTCTTCTGGGTGGGTCCATGTTGGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCAGATCTCGGTGTAGAACCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: GNSSGWVHVGELRDT*GLQAIADLGVEPPV
Trigger: GACCGGAGGTTCTACACCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 90 bp AGTCATAGTAGCCCAGGGGAATTCTTCTGGGTGGGTCCATGTTGGTaGGCTGAGAGATACCTGAGGGCTTCAGGCCATAGCAGATCTCGG +
Preference number: 5 (lower is better)
Translates to: SHSSPGEFFWVGPCW*AERYLRASGHSRSR
Trigger: CCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCCCTGGGCTACTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 90 bp AGGACTTCTGTTTGGGCATTGGCAACCAGCCCTTGCGGCAGGTCCTaGCAATCCACTCATGTTCGTCATCATCAGCATTTCTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: RTSVWALATSPCGRS*QSTHVRHHQHFSES
Trigger: GCTTTCTGAGAAATGCTGATGATGACGAACATGAGTGGATTGTCAGGACCTGCCGCAAGGGCTGGTTGCCAATGCCCAAACAGAAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 90 bp TGTCACAGTAGTGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTaGAGGTATACTTGCCCTTCACCACCAATCCCTTCTTCCAGATGG +
Preference number: 5 (lower is better)
Translates to: CHSSASVCPHTAAHH*RYTCPSPPIPSSRW
Trigger: CCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCACTACTGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS-3UTR CAA 90 bp ACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCTACTGCAGCCCATCATaGAAGGTATACTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: TFILKLKSKLGLQPVSQAYCSPS*KVYLPF
Trigger: GAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTA...GGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS CCA 72 bp CGGCTCCCACTGGGGAAGAACAGGGTTCCTTCTCCGTaGAACATGCCGTCCTTCATCTCCCCGATGTATCTC +
Preference number: 6 (lower is better)
Translates to: RLPLGKNRVPSP*NMPSFISPMYL
Trigger: GAGATACATCGGGGAGATGAAGGACGGCATGTTCCACGGAGAAGGAACCCTGTTCTTCCCCAGTGGGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 72 bp AGCCCAGGGGAATTCTTCTGGGTGGGTCCATGTTGGTaGGCTGAGAGATACCTGAGGGCTTCAGGCCATAGC +
Preference number: 6 (lower is better)
Translates to: SPGEFFWVGPCW*AERYLRASGHS
Trigger: GCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCCCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS CCA 72 bp TATACTTGCCCTTCACCACCAATCCCTTCTTCCAGATaGCGTCGAATCGGCTCCCACTGGGGAAGAACAGGG +
Preference number: 6 (lower is better)
Translates to: YTCPSPPIPSSR*RRIGSHWGRTG
Trigger: CCCTGTTCTTCCCCAGTGGGAGCCGATTCGACGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 72 bp TCTGGGTGGGTCCATGTTGGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCAGATCTCGGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: SGWVHVGELRDT*GLQAIADLGVE
Trigger: TTCTACACCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 72 bp GTTTGGGCATTGGCAACCAGCCCTTGCGGCAGGTCCTaGCAATCCACTCATGTTCGTCATCATCAGCATTTC +
Preference number: 6 (lower is better)
Translates to: VWALATSPCGRS*QSTHVRHHQHF
Trigger: GAAATGCTGATGATGACGAACATGAGTGGATTGTCAGGACCTGCCGCAAGGGCTGGTTGCCAATGCCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS CAA 90 bp TGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTGAAGGTATACTaGCCCTTCACCACCAATCCCTTCTTCCAGATGGCGTCGAATCGG +
Preference number: 6 (lower is better)
Translates to: CQCLSSYCSPSLKVY*PFTTNPFFQMASNR
Trigger: CCGATTCGACGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS CAA 72 bp TTGTCCTCATACTGCAGCCCATCATTGAAGGTATACTaGCCCTTCACCACCAATCCCTTCTTCCAGATGGCG +
Preference number: 6 (lower is better)
Translates to: LSSYCSPSLKVY*PFTTNPFFQMA
Trigger: CGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5
CDS TCA 72 bp AGTGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTaGAGGTATACTTGCCCTTCACCACCAATCCCTTCT +
Preference number: 6 (lower is better)
Translates to: SASVCPHTAAHH*RYTCPSPPIPS
Trigger: AGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028256.5