Pregenerated sensors for MORN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026894Ensembl transcript IDs: ENSMUST00000028256.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | GACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTGAGACGAATCGGCTCCCACTaGGGAAGAACAGGGTTCCTT | + |
Preference number: 4 (lower is better) Translates to: DYSQFPRPAVGRRKSLVRRIGSH*GRTGFL Trigger: AAGGAACCCTGTTCTTCCCCAGTGGGAGCCGATTCG...TCTCACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR GCA 90 bp | CTAGGACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTTGTTTGTCCTCATACTaGAGCCCATCATTGAAGGTA | + |
Preference number: 4 (lower is better) Translates to: LGLQPVSQASSGQKEVPGCLSSY*SPSLKV Trigger: TACCTTCAATGATGGGCTGCAGTATGAGGACAAACA...ACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR TCA 90 bp | ATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCAGCAGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCA | + |
Preference number: 4 (lower is better) Translates to: ILKLKSKLGLQPVSQASSELRDT*GLQAIA Trigger: TGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTC...ACTGCTGGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR CCA 90 bp | ACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCATCCCTTCTTCCAGATaGCGTCGAATCGGCTCCCAC | + |
Preference number: 4 (lower is better) Translates to: TFILKLKSKLGLQPVSQAIPSSR*RRIGSH Trigger: GTGGGAGCCGATTCGACGCCATCTGGAAGAAGGGAT...GGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR GCA 90 bp | GGCTGTTCAGTGCAGAAAACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTAGGATGTACTCGGCACTaGCCTCCATCCTCCCGTTTA | + |
Preference number: 4 (lower is better) Translates to: GCSVQKTFILKLKSKLGLGCTRH*PPSSRL Trigger: TAAACGGGAGGATGGAGGGCAGTGCCGAGTACATCC...TAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGTTTTCTGCACTGAACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR CAA 90 bp | GACTACAGCCAGTTTCCCAGGCCAGCAGTGGGCAGAAGGAAGTCCCTGGTGAGAACTTCTGTTTGGGCATaGGCAACCAGCCCTTGCGGC | + |
Preference number: 5 (lower is better) Translates to: DYSQFPRPAVGRRKSLVRTSVWA*ATSPCG Trigger: GCCGCAAGGGCTGGTTGCCAATGCCCAAACAGAAGT...TCTCACCAGGGACTTCCTTCTGCCCACTGCTGGCCTGGGAAACTGGCTGTAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 90 bp | GGGAATTCTTCTGGGTGGGTCCATGTTGGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCAGATCTCGGTGTAGAACCTCCGGTC | + |
Preference number: 5 (lower is better) Translates to: GNSSGWVHVGELRDT*GLQAIADLGVEPPV Trigger: GACCGGAGGTTCTACACCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 90 bp | AGTCATAGTAGCCCAGGGGAATTCTTCTGGGTGGGTCCATGTTGGTaGGCTGAGAGATACCTGAGGGCTTCAGGCCATAGCAGATCTCGG | + |
Preference number: 5 (lower is better) Translates to: SHSSPGEFFWVGPCW*AERYLRASGHSRSR Trigger: CCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCCCTGGGCTACTATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 90 bp | AGGACTTCTGTTTGGGCATTGGCAACCAGCCCTTGCGGCAGGTCCTaGCAATCCACTCATGTTCGTCATCATCAGCATTTCTCAGAAAGC | + |
Preference number: 5 (lower is better) Translates to: RTSVWALATSPCGRS*QSTHVRHHQHFSES Trigger: GCTTTCTGAGAAATGCTGATGATGACGAACATGAGTGGATTGTCAGGACCTGCCGCAAGGGCTGGTTGCCAATGCCCAAACAGAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 90 bp | TGTCACAGTAGTGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTaGAGGTATACTTGCCCTTCACCACCAATCCCTTCTTCCAGATGG | + |
Preference number: 5 (lower is better) Translates to: CHSSASVCPHTAAHH*RYTCPSPPIPSSRW Trigger: CCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCACTACTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS-3UTR CAA 90 bp | ACCTTTATTCTGAAACTTAAGTCGAAGCTAGGACTACAGCCAGTTTCCCAGGCCTACTGCAGCCCATCATaGAAGGTATACTTGCCCTTC | + |
Preference number: 5 (lower is better) Translates to: TFILKLKSKLGLQPVSQAYCSPS*KVYLPF Trigger: GAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTA...GGCCTGGGAAACTGGCTGTAGTCCTAGCTTCGACTTAAGTTTCAGAATAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS CCA 72 bp | CGGCTCCCACTGGGGAAGAACAGGGTTCCTTCTCCGTaGAACATGCCGTCCTTCATCTCCCCGATGTATCTC | + |
Preference number: 6 (lower is better) Translates to: RLPLGKNRVPSP*NMPSFISPMYL Trigger: GAGATACATCGGGGAGATGAAGGACGGCATGTTCCACGGAGAAGGAACCCTGTTCTTCCCCAGTGGGAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 72 bp | AGCCCAGGGGAATTCTTCTGGGTGGGTCCATGTTGGTaGGCTGAGAGATACCTGAGGGCTTCAGGCCATAGC | + |
Preference number: 6 (lower is better) Translates to: SPGEFFWVGPCW*AERYLRASGHS Trigger: GCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGAAGAATTCCCCTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS CCA 72 bp | TATACTTGCCCTTCACCACCAATCCCTTCTTCCAGATaGCGTCGAATCGGCTCCCACTGGGGAAGAACAGGG | + |
Preference number: 6 (lower is better) Translates to: YTCPSPPIPSSR*RRIGSHWGRTG Trigger: CCCTGTTCTTCCCCAGTGGGAGCCGATTCGACGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 72 bp | TCTGGGTGGGTCCATGTTGGTGAGCTGAGAGATACCTaGGGGCTTCAGGCCATAGCAGATCTCGGTGTAGAA | + |
Preference number: 6 (lower is better) Translates to: SGWVHVGELRDT*GLQAIADLGVE Trigger: TTCTACACCGAGATCTGCTATGGCCTGAAGCCCTCAGGTATCTCTCAGCTCACCAACATGGACCCACCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 72 bp | GTTTGGGCATTGGCAACCAGCCCTTGCGGCAGGTCCTaGCAATCCACTCATGTTCGTCATCATCAGCATTTC | + |
Preference number: 6 (lower is better) Translates to: VWALATSPCGRS*QSTHVRHHQHF Trigger: GAAATGCTGATGATGACGAACATGAGTGGATTGTCAGGACCTGCCGCAAGGGCTGGTTGCCAATGCCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS CAA 90 bp | TGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTGAAGGTATACTaGCCCTTCACCACCAATCCCTTCTTCCAGATGGCGTCGAATCGG | + |
Preference number: 6 (lower is better) Translates to: CQCLSSYCSPSLKVY*PFTTNPFFQMASNR Trigger: CCGATTCGACGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS CAA 72 bp | TTGTCCTCATACTGCAGCCCATCATTGAAGGTATACTaGCCCTTCACCACCAATCCCTTCTTCCAGATGGCG | + |
Preference number: 6 (lower is better) Translates to: LSSYCSPSLKVY*PFTTNPFFQMA Trigger: CGCCATCTGGAAGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |
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CDS TCA 72 bp | AGTGCCAGTGTTTGTCCTCATACTGCAGCCCATCATTaGAGGTATACTTGCCCTTCACCACCAATCCCTTCT | + |
Preference number: 6 (lower is better) Translates to: SASVCPHTAAHH*RYTCPSPPIPS Trigger: AGAAGGGATTGGTGGTGAAGGGCAAGTATACCTTCAATGATGGGCTGCAGTATGAGGACAAACACTGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028256.5 |