Pregenerated sensors for MORN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049670Ensembl transcript IDs: ENSMUST00000051772.10
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CACAGAGGCCAGTCTGGAGCCAGGCCTCCAATTGCAGTGAATGAGTaGGTAACCCCCAGAAGAGCTCTGGCCTGGACTTCACAGAGCTGC | + |
Preference number: 1 (lower is better) Translates to: HRGQSGARPPIAVNE*VTPRRALAWTSQSC Trigger: GCAGCTCTGTGAAGTCCAGGCCAGAGCTCTTCTGGGGGTTACCCACTCATTCACTGCAATTGGAGGCCTGGCTCCAGACTGGCCTCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CCA 90 bp | GTCTGTGAACACCCAGGGGACAGTGAGCCTGATCCAATGGTACGCTaGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTCCAGGCCA | + |
Preference number: 1 (lower is better) Translates to: VCEHPGDSEPDPMVR*EGALSAGLSWDSRP Trigger: TGGCCTGGAATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGGCTCACTGTCCCCTGGGTGTTCACAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CCA 90 bp | GGACCCAAGTCTGTGAACACCCAGGGGACAGTGAGCCTGATCCAATaGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATT | + |
Preference number: 1 (lower is better) Translates to: GPKSVNTQGTVSLIQ*YAGKELSVQAFPGI Trigger: AATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGGCTCACTGTCCCCTGGGTGTTCACAGACTTGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR TCA 90 bp | AAGACACAGAGGCCAGTCTGGAGCCAGGCCTCCAATTGCAGTGAATaGGTGGGTAACCCCCAGAAGAGCTCTGGCCTGGACTTCACAGAG | + |
Preference number: 1 (lower is better) Translates to: KTQRPVWSQASNCSE*VGNPQKSSGLDFTE Trigger: CTCTGTGAAGTCCAGGCCAGAGCTCTTCTGGGGGTTACCCACTCATTCACTGCAATTGGAGGCCTGGCTCCAGACTGGCCTCTGTGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR TCA 90 bp | GCCATTCCACAGAAAGCCTGGATAGGTCTGCCCTTCACCCTGGAGTaGGTCAGGAGTGCAGGTCATAAGTTACTTTTACACTGGTTTCTT | + |
Preference number: 1 (lower is better) Translates to: AIPQKAWIGLPFTLE*VRSAGHKLLLHWFL Trigger: AAGAAACCAGTGTAAAAGTAACTTATGACCTGCACTCCTGACTCACTCCAGGGTGAAGGGCAGACCTATCCAGGCTTTCTGTGGAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR GCA 90 bp | GGCATCAAGGTCATTCTCATCTCATATCCGTTTCATTTGTTCACCTaGACGCATACAAGGGAAGCCACTGCTCTACGGATCCTTTCCAGC | + |
Preference number: 1 (lower is better) Translates to: GIKVILISYPFHLFT*THTREATALRILSS Trigger: GCTGGAAAGGATCCGTAGAGCAGTGGCTTCCCTTGTATGCGTGCAGGTGAACAAATGAAACGGATATGAGATGAGAATGACCTTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CCA 90 bp | CCAGGGGACAGTGAGCCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAACTGCCGCAGGGCCTTaGGGCCAAACCCCTCCACAC | + |
Preference number: 2 (lower is better) Translates to: PGDSEPDPMVRWEGALSATAAGP*GQTPPH Trigger: GTGTGGAGGGGTTTGGCCCCAAGGCCCTGCGGCAGT...TGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGGCTCACTGTCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CCA 90 bp | GAGCCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGACACAGAGGCCAGTCTaGAGCCAGGCCTCCAATTGC | + |
Preference number: 2 (lower is better) Translates to: EPDPMVRWEGALSAGLSWTQRPV*SQASNC Trigger: GCAATTGGAGGCCTGGCTCCAGACTGGCCTCTGTGT...CCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR GCA 90 bp | CTGGTCGGCAGGGGACGGAGCACCTCCCAGGCTGTGGCATCAAGGTCATTCTCATTTCATTTGTTCACCTaGACGCATACAAGGGAAGCC | + |
Preference number: 2 (lower is better) Translates to: LVGRGRSTSQAVASRSFSFHLFT*THTREA Trigger: GGCTTCCCTTGTATGCGTGCAGGTGAACAAATGAAA...TGAGAATGACCTTGATGCCACAGCCTGGGAGGTGCTCCGTCCCCTGCCGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CCA 90 bp | CTGGGATTCCAGGCCATTCCACAGAAAGCCTGGATAGGTCTGCCCTTCACCCTGAGAAGAGCTCTGGCCTaGACTTCACAGAGCTGCTGT | + |
Preference number: 2 (lower is better) Translates to: LGFQAIPQKAWIGLPFTLRRALA*TSQSCC Trigger: ACAGCAGCTCTGTGAAGTCCAGGCCAGAGCTCTTCT...CAGGGTGAAGGGCAGACCTATCCAGGCTTTCTGTGGAATGGCCTGGAATCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CAA 90 bp | TCTGCGGTAAGTAAGGGTGGGCAGAATGAAGAGAGTCTGTATGGTTaGACAGCAGGCGGAGAGAAGGCCACAGCACTGGGTAACCCAAGG | + |
Preference number: 2 (lower is better) Translates to: SAVSKGGQNEESLYG*TAGGEKATALGNPR Trigger: CCTTGGGTTACCCAGTGCTGTGGCCTTCTCTCCGCCTGCTGTCAAACCATACAGACTCTCTTCATTCTGCCCACCCTTACTTACCGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR TCA 90 bp | CCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTCCAATTGCAGTGAATaGGTGGGTAACCCCCAGAAG | + |
Preference number: 2 (lower is better) Translates to: PDPMVRWEGALSAGLSWDSNCSE*VGNPQK Trigger: CTTCTGGGGGTTACCCACTCATTCACTGCAATTGGA...ATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR GCA 90 bp | CTGGGATTCCAGGCCATTCCACAGAAAGCCTGGATAGGTCTGCCCTTCACCCTGTACAAGGGAAGCCACTaGTCTACGGATCCTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: LGFQAIPQKAWIGLPFTLYKGSH*STDPFQ Trigger: CTGGAAAGGATCCGTAGAGCAGTGGCTTCCCTTGTA...CAGGGTGAAGGGCAGACCTATCCAGGCTTTCTGTGGAATGGCCTGGAATCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CCA 90 bp | GCTGAGGGAGAAGAAAACCACACTCTTACACCGAGGAGGGATAAGAAGACACAGAGAAGGCCACAGCACTaGGTAACCCAAGGTCTTGGG | + |
Preference number: 2 (lower is better) Translates to: AEGEENHTLTPRRDKKTQRRPQH*VTQGLG Trigger: CCCAAGACCTTGGGTTACCCAGTGCTGTGGCCTTCT...CTGTGTCTTCTTATCCCTCCTCGGTGTAAGAGTGTGGTTTTCTTCTCCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CAA 90 bp | CCAGGCTGTGGCATCAAGGTCATTCTCATCTCATATCCGTTTCATTaGTTCACCTGCACGCATACAAGGGAAGCCACTGCTCTACGGATC | + |
Preference number: 2 (lower is better) Translates to: PGCGIKVILISYPFH*FTCTHTREATALRI Trigger: GATCCGTAGAGCAGTGGCTTCCCTTGTATGCGTGCAGGTGAACAAATGAAACGGATATGAGATGAGAATGACCTTGATGCCACAGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CCA 90 bp | CCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATCACTGGTTTCTTACTTaGCTATTCTATAAAGGGATC | + |
Preference number: 2 (lower is better) Translates to: PDPMVRWEGALSAGLSWDHWFLT*LFYKGI Trigger: GATCCCTTTATAGAATAGCCAAGTAAGAAACCAGTG...ATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR-3UTR CAA 90 bp | CCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATGAGAGTCTGTATGGTTaGACAGCAGGCGGAGAGAAG | + |
Preference number: 3 (lower is better) Translates to: PDPMVRWEGALSAGLSWDESLYG*TAGGEK Trigger: CTTCTCTCCGCCTGCTGTCAAACCATACAGACTCTC...ATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CCA 90 bp | CTGGTCGGCAGGGGACGGAGCACCTCCCAGGCTGTGGCATCAAGGTCATTCTCAGGTTCCTGGCTGACTTaGAGGCGCTCTGAGCCCGCT | + |
Preference number: 4 (lower is better) Translates to: LVGRGRSTSQAVASRSFSGSWLT*RRSEPA Trigger: AGCGGGCTCAGAGCGCCTCCAAGTCAGCCAGGAACC...TGAGAATGACCTTGATGCCACAGCCTGGGAGGTGCTCCGTCCCCTGCCGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR TCA 90 bp | TACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTCCAGGCCATTCCAGTGAGGTTCCTGGCTaGCTTGGAGGCGCTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: YAGKELSVQAFPGIPGHSSEVPG*LGGALS Trigger: GCTCAGAGCGCCTCCAAGTCAGCCAGGAACCTCACT...GGAATGGCCTGGAATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR TCA 90 bp | CAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTCCAGGCAGACTCCGACGCCATTaGACTTGCCCTGGGAAAACT | + |
Preference number: 4 (lower is better) Translates to: QWYAGKELSVQAFPGIPGRLRRH*TCPGKT Trigger: AGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCT...GCCTGGAATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR TCA 90 bp | CCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTTGCGGGGTATTCCATaGGAACCATCTGGGAAAGTC | + |
Preference number: 4 (lower is better) Translates to: PDPMVRWEGALSAGLSWDLRGIP*EPSGKV Trigger: GACTTTCCCAGATGGTTCTCATGGAATACCCCGCAA...ATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CAA 72 bp | AGTAAGGGTGGGCAGAATGAAGAGAGTCTGTATGGTTaGACAGCAGGCGGAGAGAAGGCCACAGCACTGGGT | + |
Preference number: 4 (lower is better) Translates to: SKGGQNEESLYG*TAGGEKATALG Trigger: ACCCAGTGCTGTGGCCTTCTCTCCGCCTGCTGTCAAACCATACAGACTCTCTTCATTCTGCCCACCCTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CCA 90 bp | GGATGGACCCAAGTCTGTGAACACCCAGGGGACAGTGAGCCTGATCCAATGGTATCCATGAGAACCATCTaGGAAAGTCAGCAGGCCAAA | + |
Preference number: 4 (lower is better) Translates to: GWTQVCEHPGDSEPDPMVSMRTI*ESQQAK Trigger: TTTGGCCTGCTGACTTTCCCAGATGGTTCTCATGGA...TACCATTGGATCAGGCTCACTGTCCCCTGGGTGTTCACAGACTTGGGTCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR GCA 90 bp | GCTGAGGGAGAAGAAAACCACACTCTTACACCGAGGAGGGATAAGAAGACACAGGTAGGTGCCACCGTCTaGAAACACCAATTGACCAAA | + |
Preference number: 4 (lower is better) Translates to: AEGEENHTLTPRRDKKTQVGATV*KHQLTK Trigger: TTTGGTCAATTGGTGTTTGCAGACGGTGGCACCTAC...CTGTGTCTTCTTATCCCTCCTCGGTGTAAGAGTGTGGTTTTCTTCTCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR GCA 90 bp | CCTTCACCCTGGAGTGAGTCAGGAGTGCAGGTCATAAGTTACTTTTACACTGGTCGAACAGACCTTCGTTaGGGGGTATTCCATGAGAAC | + |
Preference number: 4 (lower is better) Translates to: PSPWSESGVQVISYFYTGRTDLR*GVFHEN Trigger: GTTCTCATGGAATACCCCGCAACGAAGGTCTGTTCG...ACCAGTGTAAAAGTAACTTATGACCTGCACTCCTGACTCACTCCAGGGTGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
3UTR CAA 72 bp | GGCATCAAGGTCATTCTCATCTCATATCCGTTTCATTaGTTCACCTGCACGCATACAAGGGAAGCCACTGCT | + |
Preference number: 4 (lower is better) Translates to: GIKVILISYPFH*FTCTHTREATA Trigger: AGCAGTGGCTTCCCTTGTATGCGTGCAGGTGAACAAATGAAACGGATATGAGATGAGAATGACCTTGATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR GCA 90 bp | TACTTTTACACTGGTTTCTTACTTGGCTATTCTATAAAGGGATCCTGTCTGATGAGTGACCCAGGTAGGTaGCACCGTCTGCAAACACCA | + |
Preference number: 4 (lower is better) Translates to: YFYTGFLLGYSIKGSCLMSDPGR*HRLQTP Trigger: TGGTGTTTGCAGACGGTGGCACCTACCTGGGTCACT...CATCAGACAGGATCCCTTTATAGAATAGCCAAGTAAGAAACCAGTGTAAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CCA 90 bp | TACTTTTACACTGGTTTCTTACTTGGCTATTCTATAAAGGGATCCTGTCTGATGCCATTGAACTTGCCCTaGGAAAACTCCCCCTCATAC | + |
Preference number: 4 (lower is better) Translates to: YFYTGFLLGYSIKGSCLMPLNLP*ENSPSY Trigger: GTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGG...CATCAGACAGGATCCCTTTATAGAATAGCCAAGTAAGAAACCAGTGTAAAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CAA 90 bp | CAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGATTCCAGGCACTCCCCCTCATACCTaGAGCCATCTGAGAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: QWYAGKELSVQAFPGIPGTPPHT*SHLRRS Trigger: TGACCTTCTCAGATGGCTCAAGGTATGAGGGGGAGT...GCCTGGAATCCCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CAA 90 bp | GAGCCTGATCCAATGGTACGCTGGGAAGGAGCTCTCAGTGCAGGCCTTTCCTGGGTCTGCAAACACCAATaGACCAAAGCCATGTCTCCG | + |
Preference number: 5 (lower is better) Translates to: EPDPMVRWEGALSAGLSWVCKHQ*TKAMSP Trigger: CGGAGACATGGCTTTGGTCAATTGGTGTTTGCAGAC...CCAGGAAAGGCCTGCACTGAGAGCTCCTTCCCAGCGTACCATTGGATCAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CAA 90 bp | CTGGGATTCCAGGCCATTCCACAGAAAGCCTGGATAGGTCTGCCCTTCACCCTGAAGACTCCGACGCCATaGAACTTGCCCTGGGAAAAC | + |
Preference number: 5 (lower is better) Translates to: LGFQAIPQKAWIGLPFTLKTPTP*NLPWEN Trigger: GTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTT...CAGGGTGAAGGGCAGACCTATCCAGGCTTTCTGTGGAATGGCCTGGAATCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CAA 90 bp | CCTTCACCCTGGAGTGAGTCAGGAGTGCAGGTCATAAGTTACTTTTACACTGGTCCGACGCCATTGAACTaGCCCTGGGAAAACTCCCCC | + |
Preference number: 5 (lower is better) Translates to: PSPWSESGVQVISYFYTGPTPLN*PWENSP Trigger: GGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGG...ACCAGTGTAAAAGTAACTTATGACCTGCACTCCTGACTCACTCCAGGGTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS GCA 90 bp | ACTTCTCACGCCGCAGTAGCTTGTTGTTCTCGAACAGACCTTCGTTaGGGGGTATTCCATGAGAACCATCTGGGAAAGTCAGCAGGCCAA | + |
Preference number: 5 (lower is better) Translates to: TSHAAVACCSRTDLR*GVFHENHLGKSAGQ Trigger: TTGGCCTGCTGACTTTCCCAGATGGTTCTCATGGAATACCCCGCAACGAAGGTCTGTTCGAGAACAACAAGCTACTGCGGCGTGAGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS GCA 90 bp | ATTAAAAAGCCCATTCTCGAAGTGACCCAGGTAGGTGCCACCGTCTaGAAACACCAATTGACCAAAGCCATGTCTCCGGCCCTCTTTCCA | + |
Preference number: 5 (lower is better) Translates to: IKKPILEVTQVGATV*KHQLTKAMSPALFP Trigger: TGGAAAGAGGGCCGGAGACATGGCTTTGGTCAATTGGTGTTTGCAGACGGTGGCACCTACCTGGGTCACTTCGAGAATGGGCTTTTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS TCA 90 bp | AGTAGCTTGTTGTTCTCGAACAGACCTTCGTTGCGGGGTATTCCATaGGAACCATCTGGGAAAGTCAGCAGGCCAAAACCGTCTACTCTG | + |
Preference number: 5 (lower is better) Translates to: SSLLFSNRPSLRGIP*EPSGKVSRPKPSTL Trigger: CAGAGTAGACGGTTTTGGCCTGCTGACTTTCCCAGATGGTTCTCATGGAATACCCCGCAACGAAGGTCTGTTCGAGAACAACAAGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CCA 90 bp | ATGTTGTCATATCGAATGAAGACTCCGACGCCATTGAACTTGCCCTaGGAAAACTCCCCCTCATACCTTGAGCCATCTGAGAAGGTCAGG | + |
Preference number: 5 (lower is better) Translates to: MLSYRMKTPTPLNLP*ENSPSYLEPSEKVR Trigger: CCTGACCTTCTCAGATGGCTCAAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATATGACAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS-3UTR CAA 90 bp | AAGTCTGTGAACACCCAGGGGACAGTGAGCCTGATCCAATGGTACGCTGGGAAGCCCTCAAAGGTCATGTaGTCATATCGAATGAAGACT | + |
Preference number: 5 (lower is better) Translates to: KSVNTQGTVSLIQWYAGKPSKVM*SYRMKT Trigger: AGTCTTCATTCGATATGACAACATGACCTTTGAGGG...CTTCCCAGCGTACCATTGGATCAGGCTCACTGTCCCCTGGGTGTTCACAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 90 bp | ATTCTCGAAGTGACCCAGGTAGGTGCCACCGTCTGCAAACACCAATaGACCAAAGCCATGTCTCCGGCCCTCTTTCCACTCGCCGCGGTA | + |
Preference number: 6 (lower is better) Translates to: ILEVTQVGATVCKHQ*TKAMSPALFPLAAV Trigger: TACCGCGGCGAGTGGAAAGAGGGCCGGAGACATGGCTTTGGTCAATTGGTGTTTGCAGACGGTGGCACCTACCTGGGTCACTTCGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS GCA 72 bp | CCCATTCTCGAAGTGACCCAGGTAGGTGCCACCGTCTaGAAACACCAATTGACCAAAGCCATGTCTCCGGCC | + |
Preference number: 6 (lower is better) Translates to: PILEVTQVGATV*KHQLTKAMSPA Trigger: GGCCGGAGACATGGCTTTGGTCAATTGGTGTTTGCAGACGGTGGCACCTACCTGGGTCACTTCGAGAATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 72 bp | GTGACCCAGGTAGGTGCCACCGTCTGCAAACACCAATaGACCAAAGCCATGTCTCCGGCCCTCTTTCCACTC | + |
Preference number: 6 (lower is better) Translates to: VTQVGATVCKHQ*TKAMSPALFPL Trigger: GAGTGGAAAGAGGGCCGGAGACATGGCTTTGGTCAATTGGTGTTTGCAGACGGTGGCACCTACCTGGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 72 bp | ACCACGGCGGAACACTTCTCACGCCGCAGTAGCTTGTaGTTCTCGAACAGACCTTCGTTGCGGGGTATTCCA | + |
Preference number: 6 (lower is better) Translates to: TTAEHFSRRSSL*FSNRPSLRGIP Trigger: TGGAATACCCCGCAACGAAGGTCTGTTCGAGAACAACAAGCTACTGCGGCGTGAGAAGTGTTCCGCCGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CCA 72 bp | CAGACCTTCGTTGCGGGGTATTCCATGAGAACCATCTaGGAAAGTCAGCAGGCCAAAACCGTCTACTCTGCC | + |
Preference number: 6 (lower is better) Translates to: QTFVAGYSMRTI*ESQQAKTVYSA Trigger: GGCAGAGTAGACGGTTTTGGCCTGCTGACTTTCCCAGATGGTTCTCATGGAATACCCCGCAACGAAGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS TCA 72 bp | TTGTTCTCGAACAGACCTTCGTTGCGGGGTATTCCATaGGAACCATCTGGGAAAGTCAGCAGGCCAAAACCG | + |
Preference number: 6 (lower is better) Translates to: LFSNRPSLRGIP*EPSGKVSRPKP Trigger: CGGTTTTGGCCTGCTGACTTTCCCAGATGGTTCTCATGGAATACCCCGCAACGAAGGTCTGTTCGAGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS GCA 72 bp | GCCGCAGTAGCTTGTTGTTCTCGAACAGACCTTCGTTaGGGGGTATTCCATGAGAACCATCTGGGAAAGTCA | + |
Preference number: 6 (lower is better) Translates to: AAVACCSRTDLR*GVFHENHLGKS Trigger: TGACTTTCCCAGATGGTTCTCATGGAATACCCCGCAACGAAGGTCTGTTCGAGAACAACAAGCTACTGCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CCA 72 bp | TATCGAATGAAGACTCCGACGCCATTGAACTTGCCCTaGGAAAACTCCCCCTCATACCTTGAGCCATCTGAG | + |
Preference number: 6 (lower is better) Translates to: YRMKTPTPLNLP*ENSPSYLEPSE Trigger: CTCAGATGGCTCAAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 90 bp | CCCTCAAAGGTCATGTTGTCATATCGAATGAAGACTCCGACGCCATaGAACTTGCCCTGGGAAAACTCCCCCTCATACCTTGAGCCATCT | + |
Preference number: 6 (lower is better) Translates to: PSKVMLSYRMKTPTP*NLPWENSPSYLEPS Trigger: AGATGGCTCAAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATATGACAACATGACCTTTGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 72 bp | TTGTCATATCGAATGAAGACTCCGACGCCATTGAACTaGCCCTGGGAAAACTCCCCCTCATACCTTGAGCCA | + |
Preference number: 6 (lower is better) Translates to: LSYRMKTPTPLN*PWENSPSYLEP Trigger: TGGCTCAAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATATGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 90 bp | AAGGTCATGTTGTCATATCGAATGAAGACTCCGACGCCATTGAACTaGCCCTGGGAAAACTCCCCCTCATACCTTGAGCCATCTGAGAAG | + |
Preference number: 6 (lower is better) Translates to: KVMLSYRMKTPTPLN*PWENSPSYLEPSEK Trigger: CTTCTCAGATGGCTCAAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATATGACAACATGACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |
||
CDS CAA 72 bp | GTCATGTTGTCATATCGAATGAAGACTCCGACGCCATaGAACTTGCCCTGGGAAAACTCCCCCTCATACCTT | + |
Preference number: 6 (lower is better) Translates to: VMLSYRMKTPTP*NLPWENSPSYL Trigger: AAGGTATGAGGGGGAGTTTTCCCAGGGCAAGTTCAATGGCGTCGGAGTCTTCATTCGATATGACAACATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051772.10 |