Pregenerated sensors for MORN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029477Ensembl transcript IDs: ENSMUST00000031437.14, ENSMUST00000045843.15, ENSMUST00000129934.2, ENSMUST00000132775.8, ENSMUST00000137490.2, ENSMUST00000145257.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACACCATCTGGGTCTAGAATCTCCACCTTAGGTATGGGGAACTaGGTGGGTTCAGGGGCCTCATCACGGCCAAAGTCGATCATGGTG | + |
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Preference number: 1 (lower is better) Translates to: STPSGSRISTLGMGN*VGSGASSRPKSIMV Trigger: CACCATGATCGACTTTGGCCGTGATGAGGCCCCTGAACCCACCCAGTTCCCCATACCTAAGGTGGAGATTCTAGACCCAGATGGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| 3UTR CAA 90 bp | CTCTGGTCATGCCCGGCGCCCGTTAGTGATACCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGGCTTCGGCTGACCTCAGCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LWSCPAPVSDTRRSA*FRGTERLRLTSALL Trigger: GAGGAGGGCTGAGGTCAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGTATCACTAACGGGCGCCGGGCATGACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045843.15 |
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| 3UTR-3UTR GCA 90 bp | GTACTCGGGCCTGAGGCCAGACTGGGGTCAAACCTTTGGACTCTCTTCTCTCCACTAGATGTGAGCCAGTaGTGCGCCTCACTAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VLGPEARLGSNLWTLFSPLDVSQ*CASLSW Trigger: CCAACTTAGTGAGGCGCAGCACTGGCTCACATCTAG...TGGAGAGAAGAGAGTCCAAAGGTTTGACCCCAGTCTGGCCTCAGGCCCGAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR CAA 90 bp | AAAGACTTGGAATTGAGTCATTCCTTTGTAGCCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGGCTTCGGCTGACCTCAGCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KDLELSHSFVARRSA*FRGTERLRLTSALL Trigger: GAGGAGGGCTGAGGTCAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGCTACAAAGGAATGACTCAATTCCAAGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| 3UTR-3UTR GCA 90 bp | GTACTCGGGCCTGAGGCCAGACTGGGGTCAAACCTTTGGACTCTCTTCTCTCCATCTCCATCTCCAGAATaGTGGAATGCTAGATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLGPEARLGSNLWTLFSPSPSPE*WNARCE Trigger: CTCACATCTAGCATTCCAGCATTCTGGAGATGGAGA...TGGAGAGAAGAGAGTCCAAAGGTTTGACCCCAGTCTGGCCTCAGGCCCGAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTGAGATTTGCCCTCTCTaGTCATGCCCGGCGCCCGTT | + |
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Preference number: 2 (lower is better) Translates to: GVTKKEKLDYKEARDLPSEICPL*SCPAPV Trigger: AACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTC...AGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAGAGGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATGAGATTTGCCCTCTCTaGTCATGCCCGGCGCCCGTT | + |
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Preference number: 2 (lower is better) Translates to: FQRGVTKKEKLDYKEARDEICPL*SCPAPV Trigger: AACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTC...ATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCCTCTCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAGACTGGGGTCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTTGCTGAGAGGTTTGTaGAAAGACTTGGAATTGAGT | + |
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Preference number: 2 (lower is better) Translates to: EARLGSNLWTLFSPSPECLLRGL*KDLELS Trigger: ACTCAATTCCAAGTCTTTCCACAAACCTCTCAGCAA...GCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGACCCCAGTCTGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTTTGCTGAGAGGTTTGTaGAAAGACTTGGAATTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPSPECWNARCEPVLRLTLLRGL*KDLELS Trigger: ACTCAATTCCAAGTCTTTCCACAAACCTCTCAGCAA...AGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR GCA 72 bp | GTTCAGGGGCCTCATCACGGCCAAAGTCGATCATGGTaGCACACTTGGCCACGTTGTCCACCCAGTAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: VQGPHHGQSRSW*HTWPRCPPSSL Trigger: AAGGCTACTGGGTGGACAACGTGGCCAAGTGTGGCACCATGATCGACTTTGGCCGTGATGAGGCCCCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| 3UTR CCA 72 bp | TCTGGGTCTAGAATCTCCACCTTAGGTATGGGGAACTaGGTGGGTTCAGGGGCCTCATCACGGCCAAAGTCG | + |
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Preference number: 3 (lower is better) Translates to: SGSRISTLGMGN*VGSGASSRPKS Trigger: CGACTTTGGCCGTGATGAGGCCCCTGAACCCACCCAGTTCCCCATACCTAAGGTGGAGATTCTAGACCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGTCCTTTGTACTCGGGCCTGAGGCCAGACTGGGGTCAAACCTTTGGACTCTGCGCCTCACTAAGTaGGAGTGTTTGCTGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: RLSFVLGPEARLGSNLWTLRLTK*ECLLRG Trigger: ACCTCTCAGCAAACACTCCAACTTAGTGAGGCGCAG...AGTCCAAAGGTTTGACCCCAGTCTGGCCTCAGGCCCGAGTACAAAGGACAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR GCA 72 bp | ACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATaGCCGGCGCCCGTTAGTGATACCAGAAGGTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: TIRRQEICPLWS*PAPVSDTRRSA Trigger: TGCTGACCTTCTGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR-3UTR CAA 90 bp | AAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGACCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KKSWTIRRQEICPLWSCPTRRSA*FRGTER Trigger: CCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGT...CGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTAAGCTGCGCCTCACTAAGTaGGAGTGTTTGCTGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: PSPECWNARCEPVLRLTKLRLTK*ECLLRG Trigger: ACCTCTCAGCAAACACTCCAACTTAGTGAGGCGCAG...CTTAGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGGTCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTGGAATGCTAGCCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: WGQTFGLSSLHLQNAGMLARRSA*FRGTER Trigger: CCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGC...TAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| 3UTR TCA 72 bp | TATTGGTTTGGTAAGGCTGTCCTTTGTACTCGGGCCTaGGGCCAGACTGGGGTCAAACCTTTGGACTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: YWFGKAVLCTRA*GQTGVKPLDSL Trigger: AAGAGAGTCCAAAGGTTTGACCCCAGTCTGGCCTCAGGCCCGAGTACAAAGGACAGCCTTACCAAACCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR GCA 72 bp | TCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATaGTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SNLWTLFSPSPE*WNARCEPVLRL Trigger: GAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR CCA 72 bp | AACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTaGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: NLWTLFSPSPEC*NARCEPVLRLT Trigger: AGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTACCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GVTKKEKLDYKEARDLPSTRRSA*FRGTER Trigger: CCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGT...AGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR-3UTR CAA 90 bp | CCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTAAGTTGGAGTGGAAAGACTTGGAATaGAGTCATTCCTTTGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: PECWNARCEPVLRLTKLEWKDLE*SHSFVA Trigger: GGCTACAAAGGAATGACTCAATTCCAAGTCTTTCCA...CTCCAACTTAGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTAAGACTAAGTTGGAGTGTTaGCTGAGAGGTTTGTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: PSPECWNARCEPVLRLTKTKLEC*LRGLWK Trigger: TTTCCACAAACCTCTCAGCAAACACTCCAACTTAGT...CTTAGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTGGTTTGTGGAAAGACTaGGAATTGAGTCATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: SPSPECWNARCEPVLRLTGLWKD*ELSHSF Trigger: AAAGGAATGACTCAATTCCAAGTCTTTCCACAAACC...AGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGTCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTGGAATGCTTGGAAAGACTTGGAATaGAGTCATTCCTTTGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: LGSNLWTLFSPSPECWNAWKDLE*SHSFVA Trigger: GGCTACAAAGGAATGACTCAATTCCAAGTCTTTCCA...AGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGACCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTTCTCTCCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGGTTTGTGGAAAGACTaGGAATTGAGTCATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSSLHLQNAGMLDVSQCCGLWKD*ELSHSF Trigger: AAAGGAATGACTCAATTCCAAGTCTTTCCACAAACC...GCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTGGAATTGAGTCATTCCTTTGTAGCCAGAAGGTCAGCATTGTTCAGGGGCGGTTTGTGGAAAGACTaGGAATTGAGTCATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DLELSHSFVARRSALFRGGLWKD*ELSHSF Trigger: AAAGGAATGACTCAATTCCAAGTCTTTCCACAAACC...GCCCCTGAACAATGCTGACCTTCTGGCTACAAAGGAATGACTCAATTCCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTGGAATGCTAGATGTTGGAAAGACTTGGAATaGAGTCATTCCTTTGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: SNLWTLFSPSPECWNARCWKDLE*SHSFVA Trigger: GGCTACAAAGGAATGACTCAATTCCAAGTCTTTCCA...ACATCTAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129934.2 ENSMUST00000132775.8 |
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| CDS-3UTR CCA 90 bp | AGCATTGTTCAGGGGCACGGAGAGGCTTCGGCTGACCTCAGCCCTCCTCTTCCTCCCCACCCGCTGCGCTaGTTGTTACACCACTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SIVQGHGEASADLSPPLPPHPLR*LLHHSP Trigger: GGGTGAGTGGTGTAACAACCAGCGCAGCGGGTGGGG...AGGAAGAGGAGGGCTGAGGTCAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| 3UTR CAA 72 bp | TGCCCGGCGCCCGTTAGTGATACCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGGCTTCGGCTGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: CPAPVSDTRRSA*FRGTERLRLTS Trigger: TGAGGTCAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGTATCACTAACGGGCGCCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | GGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATACCATGCGTCCCCACCCGCTaGGCTGGTTGTTACACCACT | + |
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Preference number: 4 (lower is better) Translates to: GGKRFALSGHARRPLVIPCVPTR*AGCYTT Trigger: AGTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCA...TGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | TGGGGAACTGGGTGGGTTCAGGGGCCTCATCACGGCCAAAGTCGATCATGGTGCTGCCTCTCTCCCAGATaGCCTCATACCGGTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: WGTGWVQGPHHGQSRSWCCLSPR*PHTGSR Trigger: ACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCA...GCACCATGATCGACTTTGGCCGTGATGAGGCCCCTGAACCCACCCAGTTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| CDS-3UTR GCA 90 bp | TGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTTGCGTCCCCACCCGCTaGGCTGGTTGTTACACCACT | + |
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Preference number: 4 (lower is better) Translates to: WTIRRQEICPLWSCPAPVCVPTR*AGCYTT Trigger: AGTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCA...AACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | ATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATCGTTGTTGTAGTACATaGGTCCCCACCCGCTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: IRRQEICPLWSCPAPVSDRCCST*VPTRCA Trigger: AGCGCAGCGGGTGGGGACGCATGTACTACAACAACG...ATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | ATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATTGCCTCTCTCCCAGATaGCCTCATACCGGTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: IRRQEICPLWSCPAPVSDCLSPR*PHTGSR Trigger: ACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCA...ATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR GCA 90 bp | AAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCATGCCCGTTCTTCATaGCTCTCTCCCAGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KLDYKEARDLPSLVMPGAHARSS*LSPRCP Trigger: AGGGCATCTGGGAGAGAGGCATGAAGAACGGGCATG...GGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR CCA 90 bp | GGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATACCAGAGTTTTCCGGTCTCTaGGTCAGGATGACTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGKRFALSGHARRPLVIPEFSGL*VRMTEG Trigger: TCCCTCAGTCATCCTGACCCAGAGACCGGAAAACTC...TGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | CCAGACTGGGGTCAAACCTTTGGACTCTCTTCTCTCCATCTCCAGAATGCTGGACCCCACCCGCTGCGCTaGTTGTTACACCACTCACCC | + |
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Preference number: 4 (lower is better) Translates to: PDWGQTFGLSSLHLQNAGPHPLR*LLHHSP Trigger: GGGTGAGTGGTGTAACAACCAGCGCAGCGGGTGGGG...TCCAGCATTCTGGAGATGGAGAGAAGAGAGTCCAAAGGTTTGACCCCAGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR CCA 90 bp | TGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTGGCCAAAGTCGATCATaGTGCCACACTTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: WTIRRQEICPLWSCPAPVGQSRS*CHTWPR Trigger: ACGTGGCCAAGTGTGGCACCATGATCGACTTTGGCC...AACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR GCA 90 bp | GAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCCGTTGTTGTAGTACATaGGTCCCCACCCGCTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EKLDYKEARDLPSLVMPGRCCST*VPTRCA Trigger: AGCGCAGCGGGTGGGGACGCATGTACTACAACAACG...GCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | AAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCTGGAAGAAACGGCCATaGCCGTTCTTCATGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KLDYKEARDLPSLVMPGAWKKRP*PFFMPL Trigger: GAGAGGCATGAAGAACGGGCATGGCCGTTTCTTCCA...GGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR TCA 90 bp | TCCTTTGTAGCCAGAAGGTCAGCATTGTTCAGGGGCACGGAGAGGCTTCGGCTGCTGAATACACTCTCCTaGGTTTTCCGGTCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFVARRSALFRGTERLRLLNTLS*VFRSLG Trigger: ACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAG...CAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGCTACAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR TCA 90 bp | CTTAGGTATGGGGAACTGGGTGGGTTCAGGGGCCTCATCACGGCCAAAGTCGATCTGAATACACTCTCCTaGGTTTTCCGGTCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LRYGELGGFRGLITAKVDLNTLS*VFRSLG Trigger: ACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAG...ATCGACTTTGGCCGTGATGAGGCCCCTGAACCCACCCAGTTCCCCATACCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATACCAGAAGGGCCTTTCCACCAGCCTaGATACACTCTCCTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QEICPLWSCPAPVSDTRRAFPPA*IHSPEF Trigger: AAACTCAGGAGAGTGTATTCAGGCTGGTGGAAAGGC...CCTTCTGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR GCA 90 bp | AATGCTGGAATGCTAGATGTGAGCCAGTGCTGCGCCTCACTAAGTTGGAGTGTTTGCGTCCCCACCCGCTaGGCTGGTTGTTACACCACT | + |
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Preference number: 4 (lower is better) Translates to: NAGMLDVSQCCASLSWSVCVPTR*AGCYTT Trigger: AGTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCA...AACACTCCAACTTAGTGAGGCGCAGCACTGGCTCACATCTAGCATTCCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR CCA 90 bp | CAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATACCAGAAGGCGGCTCTACTTTCCTTaGACACTTAGTGACCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: QEICPLWSCPAPVSDTRRRLYFP*TLSDRH Trigger: ATGCCGGTCACTAAGTGTCCAAGGAAAGTAGAGCCG...CCTTCTGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | AGGCTGTCCTTTGTACTCGGGCCTGAGGCCAGACTGGGGTCAAACCTTTGGACTCGGCTCTACTTTCCTTaGACACTTAGTGACCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RLSFVLGPEARLGSNLWTRLYFP*TLSDRH Trigger: ATGCCGGTCACTAAGTGTCCAAGGAAAGTAGAGCCG...AGTCCAAAGGTTTGACCCCAGTCTGGCCTCAGGCCCGAGTACAAAGGACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCGTTAGTGATACCACCTCGTAATACTCCTTaGGTCCGAAAAACTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GGKRFALSGHARRPLVIPPRNTP*VRKTGS Trigger: GGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGG...TGGTATCACTAACGGGCGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCTCTCCATCTCCAGAATGCTGGAATGCTAGATGTGAGCCAGTGCTGCTTAGGTATGGGGAACTaGGTGGGTTCAGGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSSLHLQNAGMLDVSQCCLGMGN*VGSGAS Trigger: TGAGGCCCCTGAACCCACCCAGTTCCCCATACCTAA...GCAGCACTGGCTCACATCTAGCATTCCAGCATTCTGGAGATGGAGAGAAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137490.2 |
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| 3UTR CAA 72 bp | GAATTGAGTCATTCCTTTGTAGCCAGAAGGTCAGCATaGTTCAGGGGCACGGAGAGGCTTCGGCTGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: ELSHSFVARRSA*FRGTERLRLTS Trigger: TGAGGTCAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGCTACAAAGGAATGACTCAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCCTGAATACACTCTCCTaGGTTTTCCGGTCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: EKLDYKEARDLPSLVMPGLNTLS*VFRSLG Trigger: ACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAG...GCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | AGAGGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCCCCCACCCGCTGCGCTaGTTGTTACACCACTCACCC | + |
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Preference number: 4 (lower is better) Translates to: RGVTKKEKLDYKEARDLPPHPLR*LLHHSP Trigger: GGGTGAGTGGTGTAACAACCAGCGCAGCGGGTGGGG...GGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCCTCT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | GAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCCCTCGTAATACTCCTTaGGTCCGAAAAACTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: EKLDYKEARDLPSLVMPGPRNTP*VRKTGS Trigger: GGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGG...GCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | AAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCTTAGGTATGGGGAACTaGGTGGGTTCAGGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KEKLDYKEARDLPSLVMPLGMGN*VGSGAS Trigger: TGAGGCCCCTGAACCCACCCAGTTCCCCATACCTAA...GGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR CCA 90 bp | AGCTTTATTGGTTTGGTAAGGCTGTCCTTTGTACTCGGGCCTGAGGCCAGACTGCCTCGTAATACTCCTTaGGTCCGAAAAACTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SFIGLVRLSFVLGPEARLPRNTP*VRKTGS Trigger: GGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGG...CAGTCTGGCCTCAGGCCCGAGTACAAAGGACAGCCTTACCAAACCAATAAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS-3UTR CCA 90 bp | TTCATCAGCTTATCCAACGCTTCCTTCAGCACACCATCTGGGTCTAGAATCTCCCGGCTCTACTTTCCTTaGACACTTAGTGACCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FISLSNASFSTPSGSRISRLYFP*TLSDRH Trigger: ATGCCGGTCACTAAGTGTCCAAGGAAAGTAGAGCCG...GGAGATTCTAGACCCAGATGGTGTGCTGAAGGAAGCGTTGGATAAGCTGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCCGGCTCTACTTTCCTTaGACACTTAGTGACCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TKKEKLDYKEARDLPSLVRLYFP*TLSDRH Trigger: ATGCCGGTCACTAAGTGTCCAAGGAAAGTAGAGCCG...GACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CCA 90 bp | TTTCAGAGAGGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATGTATGGGGAACTGGGTaGGTTCAGGGGCCTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: FQRGVTKKEKLDYKEARDVWGTG*VQGPHH Trigger: GTGATGAGGCCCCTGAACCCACCCAGTTCCCCATAC...ATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCCTCTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR TCA 90 bp | AGAGGAGTAACCAAGAAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCCTGAATACACTCTCCTaGGTTTTCCGGTCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RGVTKKEKLDYKEARDLPLNTLS*VFRSLG Trigger: ACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAG...GGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTTCTTGGTTACTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| 3UTR CAA 72 bp | GAGTGTTTGCTGAGAGGTTTGTGGAAAGACTTGGAATaGAGTCATTCCTTTGTAGCCAGAAGGTCAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: ECLLRGLWKDLE*SHSFVARRSAL Trigger: CAATGCTGACCTTCTGGCTACAAAGGAATGACTCAATTCCAAGTCTTTCCACAAACCTCTCAGCAAACACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132775.8 ENSMUST00000137490.2 |
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| CDS-3UTR CAA 90 bp | GGCACGGAGAGGCTTCGGCTGACCTCAGCCCTCCTCTTCCTCGGGCTTCATCAGCACCCGCTGCGCTGGTaGTTACACCACTCACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GTERLRLTSALLFLGLHQHPLRW*LHHSPS Trigger: CGAGGGTGAGTGGTGTAACAACCAGCGCAGCGGGTG...CTGATGAAGCCCGAGGAAGAGGAGGGCTGAGGTCAGCCGAAGCCTCTCCGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| CDS GCA 90 bp | CGTTCTGCCACTGGCCCTCGTAGATGTCGCCGTTGTTGTAGTACATaGGTCCCCACCCGCTGCGCTGGTTGTTACACCACTCACCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: RSATGPRRCRRCCST*VPTRCAGCYTTHPR Trigger: ACGAGGGTGAGTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCATGTACTACAACAACGGCGACATCTACGAGGGCCAGTGGCAGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| CDS GCA 90 bp | GGTGGAAGAAACGGCCATGCCCGTTCTTCATGCCTCTCTCCCAGATaGCCTCATACCGGTTCCCGTTCTTCAGCCGCAACATGCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GGRNGHARSSCLSPR*PHTGSRSSAATCPP Trigger: GGGAGGGCATGTTGCGGCTGAAGAACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCATGAAGAACGGGCATGGCCGTTTCTTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR CAA 90 bp | TCCTTTGTAGCCAGAAGGTCAGCATTGTTCAGGGGCACGGAGAGGCTTCGGCTGCACCCGCTGCGCTGGTaGTTACACCACTCACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: SFVARRSALFRGTERLRLHPLRW*LHHSPS Trigger: CGAGGGTGAGTGGTGTAACAACCAGCGCAGCGGGTG...CAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGCTACAAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132775.8 |
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| CDS GCA 90 bp | GCTGACCATGGTCCAGGTGGAAGAAACGGCCATGCCCGTTCTTCATaGCTCTCTCCCAGATGCCCTCATACCGGTTCCCGTTCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: ADHGPGGRNGHARSS*LSPRCPHTGSRSSA Trigger: GGCTGAAGAACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCATGAAGAACGGGCATGGCCGTTTCTTCCACCTGGACCATGGTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS-3UTR CAA 90 bp | AAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGGCGCCCTCCCCTTCAGGCTaGTCGTTCTGCCACTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KSWTIRRQEICPLWSCPAPSPSG*SFCHWP Trigger: GGGCCAGTGGCAGAACGACAAGCCTGAAGGGGAGGG...CGCCGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CAA 90 bp | AAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCGCCCTCCCCTTCAGGCTaGTCGTTCTGCCACTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: KKSWTIRRQEICPLWSCPPSPSG*SFCHWP Trigger: GGGCCAGTGGCAGAACGACAAGCCTGAAGGGGAGGG...CGGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS-3UTR CAA 90 bp | AAAGAAAAGCTGGACTATAAGGAGGCAAGAGATTTGCCCTCTCTGGTCATGCCCCACCCGCTGCGCTGGTaGTTACACCACTCACCCTCG | + |
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Preference number: 5 (lower is better) Translates to: KEKLDYKEARDLPSLVMPHPLRW*LHHSPS Trigger: CGAGGGTGAGTGGTGTAACAACCAGCGCAGCGGGTG...GGGCATGACCAGAGAGGGCAAATCTCTTGCCTCCTTATAGTCCAGCTTTTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 |
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| CDS GCA 90 bp | CACCACTCTTCTTCCAGACCTGTGTTCCTTTCCCGTGTTTCAAGTTaGCCTTCCATTCGCCCACGTAGTGATCGCCGTTCACAGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: HHSSSRPVFLSRVSS*PSIRPRSDRRSQQT Trigger: TGTTTGCTGTGAACGGCGATCACTACGTGGGCGAATGGAAGGGCAACTTGAAACACGGGAAAGGAACACAGGTCTGGAAGAAGAGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 ENSMUST00000145257.2 |
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| CDS CCA 90 bp | ACCCGCTGCGCTGGTTGTTACACCACTCACCCTCGTAATACTCCTTaGGTCCGAAAAACTGGATCCCATAGCCCGATTTCTTATCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TRCAGCYTTHPRNTP*VRKTGSHSPISYRL Trigger: AAGGCGATAAGAAATCGGGCTATGGGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGGGTGAGTGGTGTAACAACCAGCGCAGCGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| CDS TCA 90 bp | CATACCGGTTCCCGTTCTCGATTTCTTATCGCCTTTCCACCAGCCTaGATACACTCTCCTGAGTTTTCCGGTCTCTGGGTCAGGATGACT | + |
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Preference number: 5 (lower is better) Translates to: HTGSRSRFLIAFPPA*IHSPEFSGLWVRMT Trigger: AGTCATCCTGACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAGGCTGGTGGAAAGGCGATAAGAAATCGAGAACGGGAACCGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145257.2 |
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| CDS TCA 90 bp | AAACTGGATCCCATAGCCCGATTTCTTATCGCCTTTCCACCAGCCTaGATACACTCTCCTGAGTTTTCCGGTCTCTGGGTCAGGATGACT | + |
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Preference number: 5 (lower is better) Translates to: KLDPIARFLIAFPPA*IHSPEFSGLWVRMT Trigger: AGTCATCCTGACCCAGAGACCGGAAAACTCAGGAGAGTGTATTCAGGCTGGTGGAAAGGCGATAAGAAATCGGGCTATGGGATCCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| CDS GCA 72 bp | TGCCCTCATACCGGTTCCCGTTCTTCAGCCGCAACATaGCCTCCCCTTCAGGCTTGTCGTTCTGCCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: CPHTGSRSSAAT*PPLQACRSATG Trigger: GCCAGTGGCAGAACGACAAGCCTGAAGGGGAGGGCATGTTGCGGCTGAAGAACGGGAACCGGTATGAGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS GCA 72 bp | GGTCCAGGTGGAAGAAACGGCCATGCCCGTTCTTCATaGCTCTCTCCCAGATGCCCTCATACCGGTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: GPGGRNGHARSS*LSPRCPHTGSR Trigger: ACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCATGAAGAACGGGCATGGCCGTTTCTTCCACCTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS GCA 72 bp | ACTGGCCCTCGTAGATGTCGCCGTTGTTGTAGTACATaGGTCCCCACCCGCTGCGCTGGTTGTTACACCACT | + |
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Preference number: 6 (lower is better) Translates to: TGPRRCRRCCST*VPTRCAGCYTT Trigger: AGTGGTGTAACAACCAGCGCAGCGGGTGGGGACGCATGTACTACAACAACGGCGACATCTACGAGGGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 |
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| CDS GCA 72 bp | AACGGCCATGCCCGTTCTTCATGCCTCTCTCCCAGATaGCCTCATACCGGTTCCCGTTCTTCAGCCGCAACA | + |
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Preference number: 6 (lower is better) Translates to: NGHARSSCLSPR*PHTGSRSSAAT Trigger: TGTTGCGGCTGAAGAACGGGAACCGGTATGAGGGCATCTGGGAGAGAGGCATGAAGAACGGGCATGGCCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031437.14 |
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| CDS CAA 90 bp | GCCCTTCCATTCGCCCACGTAGTGATCGCCGTTCACAGCAAACACTaGGTGTCTCAGTCCGTTCTTCTGGGCTTTCCGGTCCCACCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALPFAHVVIAVHSKH*VSQSVLLGFPVPPF Trigger: AAAGGGTGGGACCGGAAAGCCCAGAAGAACGGACTGAGACACCAAGTGTTTGCTGTGAACGGCGATCACTACGTGGGCGAATGGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 ENSMUST00000145257.2 |
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| CDS CCA 72 bp | TTCACAGCAAACACTTGGTGTCTCAGTCCGTTCTTCTaGGCTTTCCGGTCCCACCCTTTCCACGGCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FTANTWCLSPFF*AFRSHPFHGGS Trigger: AGAGCCGCCGTGGAAAGGGTGGGACCGGAAAGCCCAGAAGAACGGACTGAGACACCAAGTGTTTGCTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 ENSMUST00000145257.2 |
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| CDS CCA 72 bp | GCTGGTTGTTACACCACTCACCCTCGTAATACTCCTTaGGTCCGAAAAACTGGATCCCATAGCCCGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGCYTTHPRNTP*VRKTGSHSPIS Trigger: AGAAATCGGGCTATGGGATCCAGTTTTTCGGACCCAAGGAGTATTACGAGGGTGAGTGGTGTAACAACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031437.14 ENSMUST00000045843.15 ENSMUST00000132775.8 |
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