RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045257

Ensembl transcript IDs: ENSMUST00000061703.10, ENSMUST00000227729.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGCACCACTGCAGGCCTTaGGTGTCAGTGTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGHHCRP*VSVYSP
Trigger: GGGAGAATACACTGACACCCAAGGCCTGCAGTGGTG...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CCA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGGTACTTTGCCCCAGTTaGGAATGTGTAAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGVLCPS*ECVSPQ
Trigger: CTGGGGACTTACACATTCCCAACTGGGGCAAAGTAC...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CCA 90 bp ACTTACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGCACCACTGCAGGCCTTaGGTGTCAGTGTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: TYGRGQVTLAEGSVALPKHHCRP*VSVYSP
Trigger: GGGAGAATACACTGACACCCAAGGCCTGCAGTGGTG...CTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CCA 90 bp ACTTACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGTACTTTGCCCCAGTTaGGAATGTGTAAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TYGRGQVTLAEGSVALPKVLCPS*ECVSPQ
Trigger: CTGGGGACTTACACATTCCCAACTGGGGCAAAGTAC...CTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR GCA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGATTTCCAGTGTACTTTaGCCCAGTTGGGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGISSVL*PSWECV
Trigger: TACACATTCCCAACTGGGGCAAAGTACACTGGAAAT...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS CCA 90 bp CCGGGGGCAGCTGTGAAGTGGAAGTTACCACACCACTGCAGGCCTTaGGTGTCAGTGTATTCTCCCTCACCTTCTACCCTATTTTCATTG +
Preference number: 5 (lower is better)
Translates to: PGAAVKWKLPHHCRP*VSVYSPSPSTLFSL
Trigger: CAATGAAAATAGGGTAGAAGGTGAGGGAGAATACACTGACACCCAAGGCCTGCAGTGGTGTGGTAACTTCCACTTCACAGCTGCCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGTGTACTTTGCCCCAGTaGGGAATGTGTAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGCTLPQ*GMCKSP
Trigger: TGGGGACTTACACATTCCCAACTGGGGCAAAGTACA...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp ACTTACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGACACCACTGCAGGCCTaGGGTGTCAGTGTATTCTCC +
Preference number: 5 (lower is better)
Translates to: TYGRGQVTLAEGSVALPKTPLQA*GVSVFS
Trigger: GGAGAATACACTGACACCCAAGGCCTGCAGTGGTGT...CTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp ACTTACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGTGTACTTTGCCCCAGTaGGGAATGTGTAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: TYGRGQVTLAEGSVALPKCTLPQ*GMCKSP
Trigger: TGGGGACTTACACATTCCCAACTGGGGCAAAGTACA...CTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGAATTTCCAGTGTACTTaGCCCCAGTTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGNFQCT*PQLGMC
Trigger: ACACATTCCCAACTGGGGCAAAGTACACTGGAAATT...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp TACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGGGGCCAAAGCCATTCATCTaGTCATCTTTCCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: YGRGQVTLAEGSVALPKGPKPFI*SSFQLP
Trigger: AGGAAGCTGGAAAGATGACAAGATGAATGGCTTTGG...CCCCTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227729.2
CDS-3UTR CAA 90 bp ACTTACGGAAGAGGGCAGGTCACTTTAGCAGAAGGTTCAGTTGCTTTGCCTAAGAATTTCCAGTGTACTTaGCCCCAGTTGGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: TYGRGQVTLAEGSVALPKNFQCT*PQLGMC
Trigger: ACACATTCCCAACTGGGGCAAAGTACACTGGAAATT...CTTAGGCAAAGCAACTGAACCTTCTGCTAAAGTGACCTGCCCTCTTCCGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS GCA 72 bp CCGGGGGCAGCTGTGAAGTGGAAGTTACCACACCACTaGAGGCCTTGGGTGTCAGTGTATTCTCCCTCACCT +
Preference number: 6 (lower is better)
Translates to: PGAAVKWKLPHH*RPWVSVYSPSP
Trigger: AGGTGAGGGAGAATACACTGACACCCAAGGCCTGCAGTGGTGTGGTAACTTCCACTTCACAGCTGCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS CCA 72 bp CTTTCCAGCTTCCTGTGTAGACAATCCCGTTCGGCGTaGTGTGCGTGCCTGTCCCGTTTCTCTCACAGATCC +
Preference number: 6 (lower is better)
Translates to: LSSFLCRQSRSA*CACLSRFSHRS
Trigger: GGATCTGTGAGAGAAACGGGACAGGCACGCACACCACGCCGAACGGGATTGTCTACACAGGAAGCTGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227729.2
CDS CAA 90 bp GCCGGGGGCAGCTGTGAAGTGGAAGTTACCACACCACTGCAGGCCTaGGGTGTCAGTGTATTCTCCCTCACCTTCTACCCTATTTTCATT +
Preference number: 6 (lower is better)
Translates to: AGGSCEVEVTTPLQA*GVSVFSLTFYPIFI
Trigger: AATGAAAATAGGGTAGAAGGTGAGGGAGAATACACTGACACCCAAGGCCTGCAGTGGTGTGGTAACTTCCACTTCACAGCTGCCCCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS CCA 72 bp GCTGTGAAGTGGAAGTTACCACACCACTGCAGGCCTTaGGTGTCAGTGTATTCTCCCTCACCTTCTACCCTA +
Preference number: 6 (lower is better)
Translates to: AVKWKLPHHCRP*VSVYSPSPSTL
Trigger: TAGGGTAGAAGGTGAGGGAGAATACACTGACACCCAAGGCCTGCAGTGGTGTGGTAACTTCCACTTCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS CAA 72 bp AGCTGTGAAGTGGAAGTTACCACACCACTGCAGGCCTaGGGTGTCAGTGTATTCTCCCTCACCTTCTACCCT +
Preference number: 6 (lower is better)
Translates to: SCEVEVTTPLQA*GVSVFSLTFYP
Trigger: AGGGTAGAAGGTGAGGGAGAATACACTGACACCCAAGGCCTGCAGTGGTGTGGTAACTTCCACTTCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2
CDS TCA 72 bp CAGTGTATTCTCCCTCACCTTCTACCCTATTTTCATTaGAATTTCCAGTGTACTTTGCCCCAGTTGGGAATG +
Preference number: 6 (lower is better)
Translates to: QCILPHLLPYFH*NFQCTLPQLGM
Trigger: CATTCCCAACTGGGGCAAAGTACACTGGAAATTTCAATGAAAATAGGGTAGAAGGTGAGGGAGAATACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061703.10
ENSMUST00000227729.2