Pregenerated sensors for MORN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029049Ensembl transcript IDs: ENSMUST00000030915.11, ENSMUST00000127457.2, ENSMUST00000132367.8, ENSMUST00000155775.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCTATGACCCGCTCACCTGGCAGGATGCTGAGGGTGTCTCCCTaGCCATGGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: AAMTRSPGRMLRVSP*PWKAPESSTGSESL Trigger: GAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGGTGAGCGGGTCATAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 90 bp | ATGACCCGCTCACCTGGCAGGATGCTGAGGGTGTCTCCCTGGCCATaGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: MTRSPGRMLRVSPWP*KAPESSTGSESLLE Trigger: CTCCAAGAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGGTGAGCGGGTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR TCA 90 bp | ACCAACACACATGAAGTGACACTGACCGGAAAGCAAGGCAGCCTGTaGCCAGACAGGGCCACGAACCCACAGCCATCTGTACTGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: TNTHEVTLTGKQGSL*PDRATNPQPSVLLS Trigger: GCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCCCTGTCTGGTCACAGGCTGCCTTGCTTTCCGGTCAGTGTCACTTCATGTGTGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 90 bp | GGACATGGGCACAGACAGGGGGTAGGAAATGCACTGGAACCCAAATaGGGTCTGGATGGGTGTCTCCATGTAGTCTTCATCCATCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: GHGHRQGVGNALEPK*GLDGCLHVVFIHLE Trigger: TTCAAGATGGATGAAGACTACATGGAGACACCCATCCAGACCCCATTTGGGTTCCAGTGCATTTCCTACCCCCTGTCTGTGCCCATGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR TCA 90 bp | AGGTCCTTCCTGGCTGAGAACCAGGACATACATCTCAGTGAAATGTaGACCAACACACATGAAGTGACACTGACCGGAAAGCAAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RSFLAENQDIHLSEM*TNTHEVTLTGKQGS Trigger: GCTGCCTTGCTTTCCGGTCAGTGTCACTTCATGTGTGTTGGTTCACATTTCACTGAGATGTATGTCCTGGTTCTCAGCCAGGAAGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 90 bp | ATTCTCAAACAACTCAAAGGAAATCTGGCTTTGAACTGGTGGACCTaGCCAGGGTACAGGTCCTTCCTGGCTGAGAACCAGGACATACAT | + |
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Preference number: 1 (lower is better) Translates to: ILKQLKGNLALNWWT*PGYRSFLAENQDIH Trigger: ATGTATGTCCTGGTTCTCAGCCAGGAAGGACCTGTACCCTGGCCAGGTCCACCAGTTCAAAGCCAGATTTCCTTTGAGTTGTTTGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTTGTGTGGTAAGGATGCAGGCCACAGGATCACCCAGGATGGGAAGCCCTCACCTGGCAGGATGCTaGGGGTGTCTCCCTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: WGCVVRMQATGSPRMGSPHLAGC*GCLPGH Trigger: ATGGCCAGGGAGACACCCTCAGCATCCTGCCAGGTG...AGGGCTTCCCATCCTGGGTGATCCTGTGGCCTGCATCCTTACCACACAACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTCTCTTGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTAGACCCACTGGCCCCCAGGACATaGGCACAGACAGGGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: ESLLESSRSALALSTVDPLAPRT*AQTGGR Trigger: CCTACCCCCTGTCTGTGCCCATGTCCTGGGGGCCAG...TGGGTCTACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGACAGGGCCACGAACCCACAGCCATCTGTACTGCTGAGCTTAGGCTGGGTGCACTGGAACCCAAATaGGGTCTGGATGGGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TRQGHEPTAICTAELRLGALEPK*GLDGCL Trigger: GAGACACCCATCCAGACCCCATTTGGGTTCCAGTGC...ACCCAGCCTAAGCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCCCTGTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CAA 90 bp | TGGCCATGGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTCTaGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: WPWKAPESSTGSESL*ESSRSALALSTVDP Trigger: TGGGTCTACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CAA 90 bp | ACGTCAGTAGCTGTGGGGCTCACGTGGGCAGTCCTAACGCTCAGGTaGTTTAGGAATAGAGAGGATGTGGTCCCTGGGAGAAGCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TSVAVGLTWAVLTLR*FRNREDVVPGRSSI Trigger: GATGCTGCTTCTCCCAGGGACCACATCCTCTCTATTCCTAAACAACCTGAGCGTTAGGACTGCCCACGTGAGCCCCACAGCTACTGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| 3UTR-3UTR CCA 90 bp | GTAAAGGCAGCTGGCTATACTTTCTCTGCTGATGGCCGCTCAGGCCTGTATGTAGCTCTGAGTCTCTCTTaGAGAGTAGCAGGTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VKAAGYTFSADGRSGLYVALSLS*RVAGQL Trigger: GAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGC...TACATACAGGCCTGAGCGGCCATCAGCAGAGAAAGTATAGCCAGCTGCCTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGGGGTAGGAAATGCACTGGAACCCAAATGGGGTCTGGATGGGTGTCTCGAGTATTCTGGGAGTTaGACATATCTGACTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RQGVGNALEPKWGLDGCLEYSGS*TYLTPA Trigger: AGCAGGAGTCAGATATGTGCAACTCCCAGAATACTC...GAGACACCCATCCAGACCCCATTTGGGTTCCAGTGCATTTCCTACCCCCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 72 bp | GTCAGCTCTGGCACTTTCCACAGTAGACCCAGGCTCTaGCCCCCAGGACATGGGCACAGACAGGGGGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: VSSGTFHSRPRL*PPGHGHRQGVG Trigger: TCCTACCCCCTGTCTGTGCCCATGTCCTGGGGGCCAGAGCCTGGGTCTACTGTGGAAAGTGCCAGAGCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 72 bp | TCACCTGGCAGGATGCTGAGGGTGTCTCCCTGGCCATaGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SPGRMLRVSPWP*KAPESSTGSES Trigger: AGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGACAGGGCCACGAACCCACAGCCATCTGTACTGCTGAGCTTAGGCTGGGTCAGGGCCACCGTGCCTaGTCACTGACACACTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: TRQGHEPTAICTAELRLGQGHRA*SLTHSG Trigger: ACCTGAGTGTGTCAGTGACAAGGCACGGTGGCCCTG...ACCCAGCCTAAGCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCCCTGTCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR GCA 72 bp | TCCGAGGTCTCTGTTCCCTTGGATACCCCTGACTGCTaGTATGACCCGCTCACCTGGCAGGATGCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SEVSVPLDTPDC*YDPLTWQDAEG Trigger: ACCCTCAGCATCCTGCCAGGTGAGCGGGTCATAGCAGCAGTCAGGGGTATCCAAGGGAACAGAGACCTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR GCA 72 bp | GGTTCCGAGGTCTCTGTTCCCTTGGATACCCCTGACTaGTGCTATGACCCGCTCACCTGGCAGGATGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GSEVSVPLDTPD*CYDPLTWQDAE Trigger: CTCAGCATCCTGCCAGGTGAGCGGGTCATAGCAGCAGTCAGGGGTATCCAAGGGAACAGAGACCTCGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCACGAACCCACAGCCATCTGTACTGCTGAGCTTAGGCTGGGTCCCATGGCTGGCTCTGAGTCTCTCTaGGAGAGTAGCAGGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GHEPTAICTAELRLGPMAGSESL*ESSRSA Trigger: AGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCC...AGCCATGGGACCCAGCCTAAGCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 72 bp | CAACTCAAAGGAAATCTGGCTTTGAACTGGTGGACCTaGCCAGGGTACAGGTCCTTCCTGGCTGAGAACCAG | + |
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Preference number: 3 (lower is better) Translates to: QLKGNLALNWWT*PGYRSFLAENQ Trigger: CTGGTTCTCAGCCAGGAAGGACCTGTACCCTGGCCAGGTCCACCAGTTCAAAGCCAGATTTCCTTTGAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR TCA 72 bp | GCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATaGGGGTATTGCTGGCTCCTTTATGTCCAACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ASISIQGRLAFP*GYCWLLYVQQP Trigger: TGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| 3UTR CCA 72 bp | TGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTaGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATG | + |
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Preference number: 3 (lower is better) Translates to: WEKQHQSPFREG*PSHEGIAGSFM Trigger: CATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| 3UTR CCA 72 bp | CACAGACAGGGGGTAGGAAATGCACTGGAACCCAAATaGGGTCTGGATGGGTGTCTCCATGTAGTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: HRQGVGNALEPK*GLDGCLHVVFI Trigger: GATGAAGACTACATGGAGACACCCATCCAGACCCCATTTGGGTTCCAGTGCATTTCCTACCCCCTGTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR CCA 72 bp | ATTCTCAAACAACTCAAAGGAAATCTGGCTTTGAACTaGTGGACCTGGCCAGGGTACAGGTCCTTCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ILKQLKGNLALN*WTWPGYRSFLA Trigger: AGCCAGGAAGGACCTGTACCCTGGCCAGGTCCACCAGTTCAAAGCCAGATTTCCTTTGAGTTGTTTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR TCA 72 bp | CTGGCTGAGAACCAGGACATACATCTCAGTGAAATGTaGACCAACACACATGAAGTGACACTGACCGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LAENQDIHLSEM*TNTHEVTLTGK Trigger: CTTTCCGGTCAGTGTCACTTCATGTGTGTTGGTTCACATTTCACTGAGATGTATGTCCTGGTTCTCAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| 3UTR TCA 72 bp | AGAGAACATAATGCCACCAGGCACAACAGACTGCAGTaGTTAAACTTCAATTGCATGAATAATTCTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: REHNATRHNRLQ*LNFNCMNNSQT Trigger: TGTTTGAGAATTATTCATGCAATTGAAGTTTAATCACTGCAGTCTGTTGTGCCTGGTGGCATTATGTTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR TCA 90 bp | CCCTGCAGACCCCATAGCTGCTGGGGTTGTGTGGTAAGGATGCAGGCCACAGGAAGCACCCCGTGTCCCTaGCGCTGGTCTCGAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: PCRPHSCWGCVVRMQATGSTPCP*RWSRTQ Trigger: TTGGGTTCGAGACCAGCGTCAGGGACACGGGGTGCT...TCCTGTGGCCTGCATCCTTACCACACAACCCCAGCAGCTATGGGGTCTGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR CCA 90 bp | AGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCGTGGTGGGCAGCCTGTaGCCCAGGAAGGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RMWSLGEAASISIQGRLAVVGSL*PRKGGL Trigger: CAGCCCTCCCTTCCTGGGCCACAGGCTGCCCACCAC...GGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR GCA 90 bp | GACAGGGCCACGAACCCACAGCCATCTGTACTGCTGAGCTTAGGCTGGGTCCCATCCTCCAGAAACCCCTaGCCTTCCCTCAGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DRATNPQPSVLLSLGWVPSSRNP*PSLRPW Trigger: CCAAGGCCTGAGGGAAGGGCAGGGGTTTCTGGAGGA...TGGGACCCAGCCTAAGCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR CCA 90 bp | TGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCTGGCCCCCAGGACATaGGCACAGACAGGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CGPWEKQHQSPFREGWPSLAPRT*AQTGGR Trigger: CCTACCCCCTGTCTGTGCCCATGTCCTGGGGGCCAG...GGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CCA 90 bp | GAGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCGAGGTTCCTGGGCAGTaGGCAGCACCTCTGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: EDVVPGRSSINLHSGKAGEVPGQ*AAPLGN Trigger: GTTCCCCAGAGGTGCTGCCCACTGCCCAGGAACCTC...GCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CCA 90 bp | GGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGGGACATGGGGCCAGTaGGTGTCCCCCTTGGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: GPWEKQHQSPFREGWPSHGTWGQ*VSPLAK Trigger: CTTAGCCAAGGGGGACACCCACTGGCCCCATGTCCC...ATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | TTGAACTGGTGGACCTGGCCAGGGTACAGGTCCTTCCTGGCTGAGAACCAGGACAGAGTAGGTGTTTCCTaGCCAGGCCCAGTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LNWWTWPGYRSFLAENQDRVGVS*PGPVLA Trigger: TGCCAGCACTGGGCCTGGTCAGGAAACACCTACTCT...GTCCTGGTTCTCAGCCAGGAAGGACCTGTACCCTGGCCAGGTCCACCAGTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR TCA 90 bp | GGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTAAGCACCCCGTGTCCCTaGCGCTGGTCTCGAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRSSINLHSGKAGLPMRVSTPCP*RWSRTQ Trigger: TTGGGTTCGAGACCAGCGTCAGGGACACGGGGTGCT...TACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | TGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTTGGCTGGCAGGATGCTaGGGGTGTCTCCCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WEKQHQSPFREGWPSHEGWLAGC*GCLPGH Trigger: ATGGCCAGGGAGACACCCTCAGCATCCTGCCAGCCA...ACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | CTGGCACTTTCCACAGTAGACCCAGGCTCTGGCCCCCAGGACATGGGCACAGACAACAATAGCTTCCCATaGCCGTGTTTCTTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LALSTVDPGSGPQDMGTDNNSFP*PCFLPP Trigger: GGGAGGCAAGAAACACGGTCATGGGAAGCTATTGTT...GTCTGTGCCCATGTCCTGGGGGCCAGAGCCTGGGTCTACTGTGGAAAGTGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR TCA 90 bp | GGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATAGAGTAGGTGTTTCCTaGCCAGGCCCAGTGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GPWEKQHQSPFREGWPSHRVGVS*PGPVLA Trigger: TGCCAGCACTGGGCCTGGTCAGGAAACACCTACTCT...ATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | GAGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCGGCTTTGTACTTCATaGCGCCGTGCCCTTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EDVVPGRSSINLHSGKAGRLCTS*RRALEA Trigger: AGCCTCAAGGGCACGGCGTCATGAAGTACAAAGCCG...GCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | GTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGTATACCTGCCCGTCCTaGTCCTCCAGAAACCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPGRSSINLHSGKAGLPMYTCPS*SSRNPC Trigger: GCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATA...CATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | GGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATATATCTGACTCCTGCTaGGATCTTCAGGACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPWEKQHQSPFREGWPSHISDSC*DLQDPA Trigger: GGCCGGGTCCTGAAGATCTCAGCAGGAGTCAGATAT...ATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | TGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTCCGTGGTCCACTTGCTaGCAGCAGGGTTTGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: WEKQHQSPFREGWPSHEGPWSTC*QQGLCL Trigger: GAGACACAAACCCTGCTGTCAGCAAGTGGACCACGG...ACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | ATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCAGATCCGCAGGTGTTTaGAGGTGGTGGGCAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: MWSLGEAASISIQGRLAFRSAGV*RWWAAC Trigger: ACAGGCTGCCCACCACCTTCAAACACCTGCGGATCT...GAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR GCA 90 bp | AGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTTCCTCCAGAAACCCCTaGCCTTCCCTCAGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SINLHSGKAGLPMRVLLASSRNP*PSLRPW Trigger: CCAAGGCCTGAGGGAAGGGCAGGGGTTTCTGGAGGA...AGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CCA 90 bp | TGCTGGGGTTGTGTGGTAAGGATGCAGGCCACAGGATCACCCAGGATGGGAAGCGTGAAGGGAGACCCTTaGACCACTTCCAGTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: CWGCVVRMQATGSPRMGSVKGDP*TTSSTS Trigger: AGAGGTACTGGAAGTGGTCCAAGGGTCTCCCTTCAC...GCTTCCCATCCTGGGTGATCCTGTGGCCTGCATCCTTACCACACAACCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR CCA 90 bp | GGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATCCTTTTAGAGGTTCCTaGGCAGTGGGCAGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPWEKQHQSPFREGWPSHPFRGS*AVGSTS Trigger: AGAGGTGCTGCCCACTGCCCAGGAACCTCTAAAAGG...ATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR TCA 90 bp | GAGTCTCTCTTGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTAGACCCATATACCTGCCCGTCCTaGTCCTCCAGAAACCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ESLLESSRSALALSTVDPYTCPS*SSRNPC Trigger: GCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATA...TGGGTCTACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR TCA 90 bp | CCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCACATCCCACAGTAGGTaGCTCCTGAGCAGTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: PFREGWPSHEGIAGSFMSTSHSR*LLSSGP Trigger: TGGTCCACTGCTCAGGAGTCACCTACTGTGGGATGT...GGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CCA 90 bp | CCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCACTGTCCCTTGTATGTaGAGCCGTCGGCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PFREGWPSHEGIAGSFMSTVPCM*SRRHST Trigger: TGTGCTGTGCCGACGGCTCCACATACAAGGGACAGT...GGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | AGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTGTGACTCCTGAGCAGTaGACCAAGCTGCCGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SINLHSGKAGLPMRVLLAVTPEQ*TKLPSP Trigger: TGGACTCGGCAGCTTGGTCCACTGCTCAGGAGTCAC...AGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAGTCTCTCTTGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTAGTGACTCCTGAGCAGTaGACCAAGCTGCCGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSESLLESSRSALALSTVVTPEQ*TKLPSP Trigger: TGGACTCGGCAGCTTGGTCCACTGCTCAGGAGTCAC...TACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGAGTGGGCAGCACCTCTaGGGAACTTGGGCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLPMRVLLAPLCPTAKSGQHL*GTWATF Trigger: AAAGGTGGCCCAAGTTCCCCAGAGGTGCTGCCCACT...CTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| 3UTR CAA 72 bp | AAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTCTaGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KAPESSTGSESL*ESSRSALALST Trigger: TGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR TCA 90 bp | GAGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCAACAATAGCTTCCCATaGCCGTGTTTCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDVVPGRSSINLHSGKAGNNSFP*PCFLPP Trigger: GGGAGGCAAGAAACACGGTCATGGGAAGCTATTGTT...GCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTCTTGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTAGACCCAACATCCCACAGTAGGTaGCTCCTGAGCAGTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLLESSRSALALSTVDPTSHSR*LLSSGP Trigger: TGGTCCACTGCTCAGGAGTCACCTACTGTGGGATGT...TGGGTCTACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGGTTGTGTGGTAAGGATGCAGGCCACAGGATCACCCAGGATGGGAAGCCATGACCGTGTTTCTTaGCTCCCTTCCATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWGCVVRMQATGSPRMGSHDRVS*LPSILL Trigger: AAGGAGAATGGAAGGGAGGCAAGAAACACGGTCATG...GCTTCCCATCCTGGGTGATCCTGTGGCCTGCATCCTTACCACACAACCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTAGTGAAGGGAGACCCTTaGACCACTTCCAGTACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSSINLHSGKAGLPMRVVKGDP*TTSSTS Trigger: AGAGGTACTGGAAGTGGTCCAAGGGTCTCCCTTCAC...TACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCGGCCACTCTCACTTTTaGCAACTTCCCCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVPGRSSINLHSGKAGLPGHSHF*QLPHHL Trigger: AAGATGATGGGGAAGTTGCCAAAAGTGAGAGTGGCC...GGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGAGTAGCGCACTGGAACCCAAATaGGGTCTGGATGGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPMRVLLAPLCPTAKSSALEPK*GLDGCL Trigger: GAGACACCCATCCAGACCCCATTTGGGTTCCAGTGC...GCTACTCTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | TGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTGCTCTGAGTCTCTCTTaGAGAGTAGCAGGTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEKQHQSPFREGWPSHEGALSLS*RVAGQL Trigger: GAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGC...ACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | AGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTTTTGTGTCTCCTGGCTaGCAGGATGCTGAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SINLHSGKAGLPMRVLLAFVSPG*QDAEGV Trigger: GACACCCTCAGCATCCTGCCAGCCAGGAGACACAAA...AGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| 3UTR CAA 72 bp | CTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATaGCTGGCTCCTTTATGTCCAACAGCCAAGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSGKAGLPMRV*LAPLCPTAKSS Trigger: GCTACTCTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGCATCAGGCCTGTTGGTaGCTTTTAGAGGTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGLPMRVLLAPLCPTAKHQACW*LLEVPG Trigger: CCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATG...CTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAGACCCCATAGCTGCTGGGGTTGTGTGGTAAGGATGCAGGCCACAGGACACTTCCAGTACCTCTaGACCCAGAATCACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCRPHSCWGCVVRMQATGHFQYL*TQNHNF Trigger: AAAATTGTGATTCTGGGTCCAGAGGTACTGGAAGTG...TCCTGTGGCCTGCATCCTTACCACACAACCCCAGCAGCTATGGGGTCTGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCTCCCATCAGGCCTGTTaGTGCCTTTTAGAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFREGWPSHEGIAGSFMSSHQAC*CLLEVP Trigger: AGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGA...GGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGGGTACATGACCGTGTTTCTTaGCTCCCTTCCATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSSINLHSGKAGLPMRVHDRVS*LPSILL Trigger: AAGGAGAATGGAAGGGAGGCAAGAAACACGGTCATG...TACCCTCATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCCACTTCCAGTACCTCTaGACCCAGAATCACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVPGRSSINLHSGKAGLPHFQYL*TQNHNF Trigger: AAAATTGTGATTCTGGGTCCAGAGGTACTGGAAGTG...GGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR TCA 90 bp | GGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGAGTAGCGGAGTTGCACATATCTaGCTCCTGCTGAGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPMRVLLAPLCPTAKSSGVAHI*LLLRSS Trigger: TGAAGATCTCAGCAGGAGTCAGATATGTGCAACTCC...GCTACTCTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR GCA 90 bp | GGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGAGTAGCCTGAAGACATCACTGTaGCACTGTCCCTTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLPMRVLLAPLCPTAKSSLKTSL*HCPLYV Trigger: CACATACAAGGGACAGTGGCACAGTGATGTCTTCAG...GCTACTCTTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCTGTCTCTTGTTGTCATaGAAGGAACCCTGGTATACC | + |
|
Preference number: 4 (lower is better) Translates to: REGWPSHEGIAGSFMSNSCLLLS*KEPWYT Trigger: GGTATACCAGGGTTCCTTCCATGACAACAAGAGACA...GCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCTGCTGATGGCCGCTCAGGCCTGTATGTACCCAAGCTTCATGTCTCACCGGCCACTCTCATTTTaGCAACTTCCCCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLMAAQACMYPSFMSHRPLSF*QLPHHL Trigger: AAGATGATGGGGAAGTTGCCAAAATGAGAGTGGCCG...GTGAGACATGAAGCTTGGGTACATACAGGCCTGAGCGGCCATCAGCAGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCAAGAGTATTCTGGGAGTTaGACATATCTGACTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGWPSHEGIAGSFMSNSQEYSGS*TYLTPA Trigger: AGCAGGAGTCAGATATGTGCAACTCCCAGAATACTC...TTGGCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | GGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGCGGAAGAAAGAATTTaGGTATACATATACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GPWEKQHQSPFREGWPSHAEERI*VYIYAI Trigger: TATGGCGTATATGTATACCCAAATTCTTTCTTCCGC...ATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAGACAGGGGGTAGGAAATGCACTGGAACCCAAATGGGGTCTGGATGGGCGGAAGAAAGAATTTaGGTATACATATACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: WAQTGGRKCTGTQMGSGWAEERI*VYIYAI Trigger: TATGGCGTATATGTATACCCAAATTCTTTCTTCCGC...CCATCCAGACCCCATTTGGGTTCCAGTGCATTTCCTACCCCCTGTCTGTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CCA 90 bp | GCTATACTTTCTCTGCTGATGGCCGCTCAGGCCTGTATGTACCCAAGCTTCATGTGTCTCTTGTTGTCATaGAAGGAACCCTGGTATACC | + |
|
Preference number: 4 (lower is better) Translates to: AILSLLMAAQACMYPSFMCLLLS*KEPWYT Trigger: GGTATACCAGGGTTCCTTCCATGACAACAAGAGACA...CATGAAGCTTGGGTACATACAGGCCTGAGCGGCCATCAGCAGAGAAAGTATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS TCA 90 bp | CATGGGGCCAGTGGGTGTCCCCCTTGGCTAAGATCCGCAGGTGTTTaGAGGTGGTGGGCAGCCTGTGGCCCAGGAAGGGAGGGCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGASGCPPWLRSAGV*RWWAACGPGREGWS Trigger: TGACCAGCCCTCCCTTCCTGGGCCACAGGCTGCCCACCACCTTCAAACACCTGCGGATCTTAGCCAAGGGGGACACCCACTGGCCCCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS TCA 90 bp | CCACTTGCTGACAGCAGGGTTTGTGTCTCCTGGCTGGCAGGATGCTaGGGGTGTCTCCCTGGCCATGGAAGGCTCCTGAGTCCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLADSRVCVSWLAGC*GCLPGHGRLLSPAQ Trigger: CTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGCCAGGAGACACAAACCCTGCTGTCAGCAAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS CCA 90 bp | CAGGGTTTGTGTCTCCTGGCTGGCAGGATGCTGAGGGTGTCTCCCTaGCCATGGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGLCLLAGRMLRVSP*PWKAPESSTGSESL Trigger: GAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGCCAGGAGACACAAACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS TCA 90 bp | ACCCTGGTATACCTGCCCGTCCTGATCCTCCAGAAACCCCTGCCCTaGCCAGGCCCAGTGCTGGCAGCCTTCCCCAGTAATTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLVYLPVLILQKPLP*PGPVLAAFPSNFSI Trigger: GATGGAGAAATTACTGGGGAAGGCTGCCAGCACTGGGCCTGGTCAGGGCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATACCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155775.8 |
||
| CDS CCA 90 bp | TTGTGTCTCCTGGCTGGCAGGATGCTGAGGGTGTCTCCCTGGCCATaGAAGGCTCCTGAGTCCAGCACAGGCTCTGAGTCTCTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLAGRMLRVSPWP*KAPESSTGSESLLE Trigger: CTCCAAGAGAGACTCAGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGCCAGGAGACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS TCA 90 bp | CCCTTGTATGTGGAGCCGTCGGCACAGCACAGCACCCCGTGTCCCTaGCGCTGGTCTCGAACCCAATCACCTTCGTACTTGTCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PLYVEPSAQHSTPCP*RWSRTQSPSYLSPF Trigger: GAATGGTGACAAGTACGAAGGTGATTGGGTTCGAGACCAGCGTCAGGGACACGGGGTGCTGTGCTGTGCCGACGGCTCCACATACAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
||
| CDS CCA 90 bp | TCTACTGTGGTCCCATCAGGCCTGTTGGTGCCTTTTAGAGGTTCCTaGGCAGTGGGCAGCACCTCTGGGGAACTTGGGCCACCTTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: STVVPSGLLVPFRGS*AVGSTSGELGPPLG Trigger: GCCTAAAGGTGGCCCAAGTTCCCCAGAGGTGCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGACCACAGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CAA 90 bp | AGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCCTGTGCCACTGTCCCTaGTATGTGGAGCCGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMWSLGEAASISIQGRLALCHCP*YVEPSA Trigger: TGCCGACGGCTCCACATACAAGGGACAGTGGCACAG...GGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS TCA 90 bp | TGTCTCTTGTTGTCATGGAAGGAACCCTGGTATACCTGCCCGTCCTaGTCCTCCAGAAACCCCTGCCCTTCCCTCAGGCCTTGGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLLLSWKEPWYTCPS*SSRNPCPSLRPWES Trigger: GCTCTCCCAAGGCCTGAGGGAAGGGCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATACCAGGGTTCCTTCCATGACAACAAGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 |
||
| CDS TCA 90 bp | CTCTTGTATGTGGAGCCGTCGGCACAGCACAGCACCCCGTGTCCCTaGCGCTGGTCTCGAACCCAATCACCTTCGTACTTGTCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LLYVEPSAQHSTPCP*RWSRTQSPSYLSPF Trigger: GAATGGTGACAAGTACGAAGGTGATTGGGTTCGAGACCAGCGTCAGGGACACGGGGTGCTGTGCTGTGCCGACGGCTCCACATACAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127457.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACAGCCCCTTCCCTCAGGCCTaGGGAGAGCTCCCCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: REGWPSHEGIAGSFMSNSPFPQA*GELPFI Trigger: TATGAAGGGGAGCTCTCCCAAGGCCTGAGGGAAGGG...GCTGTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCCGGCCATGTCTCTTGTaGTCATGGAAGGAACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVPGRSSINLHSGKAGLPRPCLL*SWKEPW Trigger: CCAGGGTTCCTTCCATGACAACAAGAGACATGGCCG...GGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGCCACGAACCCACAGCCATCTGTACTGCTGAGCTTAGGCTGGGTCCCCCGGCCACTCTCATTTaGGCAACTTCCCCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RQGHEPTAICTAELRLGPPATLI*ATSPSS Trigger: AGATGATGGGGAAGTTGCCAAAATGAGAGTGGCCGG...GGGACCCAGCCTAAGCTCAGCAGTACAGATGGCTGTGGGTTCGTGGCCCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAGTCTCTCTTGGAGAGTAGCAGGTCAGCTCTGGCACTTTCCACAGTACCCTTCCCTCAGGCCTaGGGAGAGCTCCCCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GSESLLESSRSALALSTVPFPQA*GELPFI Trigger: TATGAAGGGGAGCTCTCCCAAGGCCTGAGGGAAGGG...TACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
||
| CDS-3UTR CAA 90 bp | GAGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCGGCTCTGAGTCTCTCTaGGAGAGTAGCAGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EDVVPGRSSINLHSGKAGGSESL*ESSRSA Trigger: AGCTGACCTGCTACTCTCCAAGAGAGACTCAGAGCC...GCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCAAGATCCGCAGGTGTTaGAAGGTGGTGGGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MWSLGEAASISIQGRLAFKIRRC*KVVGSL Trigger: CAGGCTGCCCACCACCTTCAAACACCTGCGGATCTT...GAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
||
| CDS TCA 90 bp | CTTGGGAGAGCTCCCCTTCATAGCGACCTCCGGCTTTGTACTTCATaGCGCCGTGCCCTTGAGGCTCTCCTAAAACAAACTGTCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGRAPLHSDLRLCTS*RRALEALLKQTVQS Trigger: ACTCTGGACAGTTTGTTTTAGGAGAGCCTCAAGGGCACGGCGTCATGAAGTACAAAGCCGGAGGTCGCTATGAAGGGGAGCTCTCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 |
||
| CDS TCA 90 bp | TTCTGCTGGGTGGCCGTTAATGAACATCCCACAGTAGGTGACTCCTaGGCAGTGGACCAAGCTGCCGAGTCCACTGAAGACATCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCWVAVNEHPTVGDS*AVDQAAESTEDITV Trigger: CACAGTGATGTCTTCAGTGGACTCGGCAGCTTGGTCCACTGCTCAGGAGTCACCTACTGTGGGATGTTCATTAACGGCCACCCAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
||
| CDS GCA 90 bp | TTCAGGACCCGGCCACTCTCACTTTTGGCAACTTCCCCATCATCTTaGTGCAGCTGTACACTCAACGTGAAGGGAGACCCTTGGACCACT | + |
|
Preference number: 5 (lower is better) Translates to: FRTRPLSLLATSPSS*CSCTLNVKGDPWTT Trigger: AGTGGTCCAAGGGTCTCCCTTCACGTTGAGTGTACAGCTGCAGCAAGATGATGGGGAAGTTGCCAAAAGTGAGAGTGGCCGGGTCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CAA 90 bp | TGGGGTTGTGTGGTAAGGATGCAGGCCACAGGATCACCCAGGATGGGAAGCCCTAACTTCCCCATCATCTaGCTGCAGCTGTACACTCAA | + |
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Preference number: 5 (lower is better) Translates to: WGCVVRMQATGSPRMGSPNFPII*LQLYTQ Trigger: TTGAGTGTACAGCTGCAGCAAGATGATGGGGAAGTT...AGGGCTTCCCATCCTGGGTGATCCTGTGGCCTGCATCCTTACCACACAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS TCA 90 bp | GCTGACCTCAGAGTATTCTGGGAGTTGCACATATCTGACTCCTGCTaGGATCTTCAGGACCCGGCCACTCTCACTTTTGGCAACTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: ADLRVFWELHISDSC*DLQDPATLTFGNFP Trigger: GGGGAAGTTGCCAAAAGTGAGAGTGGCCGGGTCCTGAAGATCTCAGCAGGAGTCAGATATGTGCAACTCCCAGAATACTCTGAGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CAA 90 bp | ACAGGTCCTTCCTGGCTGAGAACCAGGACATACATCTCAGTGAAATGTGAACCACTGTGCCACTGTCCCTaGTATGTGGAGCCGTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: TGPSWLRTRTYISVKCEPLCHCP*YVEPSA Trigger: TGCCGACGGCTCCACATACAAGGGACAGTGGCACAG...TGGTTCACATTTCACTGAGATGTATGTCCTGGTTCTCAGCCAGGAAGGACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS-3UTR CAA 90 bp | TTCAGGGAAGGCTGGCCTTCCCATGAGGGTATTGCTGGCTCCTTTATGTCCAACCGGCCACTCTCACTTTaGGCAACTTCCCCATCATCT | + |
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Preference number: 5 (lower is better) Translates to: FREGWPSHEGIAGSFMSNRPLSL*ATSPSS Trigger: AGATGATGGGGAAGTTGCCAAAAGTGAGAGTGGCCG...GTTGGACATAAAGGAGCCAGCAATACCCTCATGGGAAGGCCAGCCTTCCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CCA 90 bp | TACACTCAACGTGAAGGGAGACCCTTGGACCACTTCCAGTACCTCTaGACCCAGAATCACAATTTTCTTAGCCTGTTCTGCTGGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: YTQREGRPLDHFQYL*TQNHNFLSLFCWVA Trigger: GGCCACCCAGCAGAACAGGCTAAGAAAATTGTGATTCTGGGTCCAGAGGTACTGGAAGTGGTCCAAGGGTCTCCCTTCACGTTGAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
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| CDS CCA 90 bp | TTTCTTGCCTCCCTTCCATTCTCCTTCATAGCGGAAGAAAGAATTTaGGTATACATATACGCCATAGCCGTTTCGCGGCGGCAGTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: FLASLPFSFIAEERI*VYIYAIAVSRRQSR Trigger: CCGAGACTGCCGCCGCGAAACGGCTATGGCGTATATGTATACCCAAATTCTTTCTTCCGCTATGAAGGAGAATGGAAGGGAGGCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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| CDS-3UTR CAA 90 bp | GTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGCTGGCCTTCCCATGAGCGGAAGAAAGAATTaGGGTATACATATACGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VPGRSSINLHSGKAGLPMSGRKN*GIHIRH Trigger: ATGGCGTATATGTATACCCAAATTCTTTCTTCCGCT...CATGGGAAGGCCAGCCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS-3UTR CAA 90 bp | ATAGAGAGGATGTGGTCCCTGGGAGAAGCAGCATCAATCTCCATTCAGGGAAGGAACTTCCCCATCATCTaGCTGCAGCTGTACACTCAA | + |
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Preference number: 5 (lower is better) Translates to: IERMWSLGEAASISIQGRNFPII*LQLYTQ Trigger: TTGAGTGTACAGCTGCAGCAAGATGATGGGGAAGTT...CCTTCCCTGAATGGAGATTGATGCTGCTTCTCCCAGGGACCACATCCTCTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS GCA 90 bp | CGAACCCAATCACCTTCGTACTTGTCACCATTCTTAAAGATCATCTaGCCACGGCCATGTCTCTTGTTGTCATGGAAGGAACCCTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: RTQSPSYLSPFLKII*PRPCLLLSWKEPWY Trigger: ATACCAGGGTTCCTTCCATGACAACAAGAGACATGGCCGTGGGCAGATGATCTTTAAGAATGGTGACAAGTACGAAGGTGATTGGGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGACCTCAGAGTATTCTGGGAGTTGCACATATCTGACTCCTGCTGAGATCAGCGGAAGAAAGAATTaGGGTATACATATACGCCAT | + |
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Preference number: 5 (lower is better) Translates to: KLTSEYSGSCTYLTPAEISGRKN*GIHIRH Trigger: ATGGCGTATATGTATACCCAAATTCTTTCTTCCGCT...GATCTCAGCAGGAGTCAGATATGTGCAACTCCCAGAATACTCTGAGGTCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132367.8 |
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| CDS GCA 72 bp | TCTCCAGCGTGCCGGGCAGGAACAGGTAAGGCTGCATaGCAGGCGGAGGGGCTCCGAGGAGGATGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: SPACRAGTGKAA*QAEGLRGGCPQ Trigger: TTGTGGACATCCTCCTCGGAGCCCCTCCGCCTGGCATGCAGCCTTACCTGTTCCTGCCCGGCACGCTGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CAA 90 bp | ACATGGGGCCAGTGGGTGTCCCCCTTGGCTAAGATCCGCAGGTGTTaGAAGGTGGTGGGCAGCCTGTGGCCCAGGAAGGGAGGGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TWGQWVSPLAKIRRC*KVVGSLWPRKGGLV Trigger: GACCAGCCCTCCCTTCCTGGGCCACAGGCTGCCCACCACCTTCAAACACCTGCGGATCTTAGCCAAGGGGGACACCCACTGGCCCCATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS TCA 72 bp | GTGGAGCCGTCGGCACAGCACAGCACCCCGTGTCCCTaGCGCTGGTCTCGAACCCAATCACCTTCGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: VEPSAQHSTPCP*RWSRTQSPSYL Trigger: CAAGTACGAAGGTGATTGGGTTCGAGACCAGCGTCAGGGACACGGGGTGCTGTGCTGTGCCGACGGCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 |
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| CDS CCA 72 bp | AGGTTCCTGGGCAGTGGGCAGCACCTCTGGGGAACTTaGGCCACCTTTAGGCCTGCCGAGAGTCTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RFLGSGQHLWGT*ATFRPAESLLQ Trigger: CTGGAGAAGACTCTCGGCAGGCCTAAAGGTGGCCCAAGTTCCCCAGAGGTGCTGCCCACTGCCCAGGAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CCA 72 bp | GTCCCATCAGGCCTGTTGGTGCCTTTTAGAGGTTCCTaGGCAGTGGGCAGCACCTCTGGGGAACTTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VPSGLLVPFRGS*AVGSTSGELGP Trigger: TGGCCCAAGTTCCCCAGAGGTGCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CAA 72 bp | GCTGTCGGTGGCTCTACTGTGGTCCCATCAGGCCTGTaGGTGCCTTTTAGAGGTTCCTGGGCAGTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AVGGSTVVPSGL*VPFRGSWAVGS Trigger: GCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGACCACAGTAGAGCCACCGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS GCA 72 bp | TCGGTGGCTCTACTGTGGTCCCATCAGGCCTGTTGGTaGCTTTTAGAGGTTCCTGGGCAGTGGGCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: SVALLWSHQACW*LLEVPGQWAAP Trigger: AGGTGCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGACCACAGTAGAGCCACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CCA 72 bp | CTGTCGGTGGCTCTACTGTGGTCCCATCAGGCCTGTTaGTGCCTTTTAGAGGTTCCTGGGCAGTGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSVALLWSHQAC*CLLEVPGQWAA Trigger: TGCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGACCACAGTAGAGCCACCGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CCA 72 bp | AATAAGGAAAGTCAGCCTCTGGGGCGCTCTTGTATGTaGAGCCGTCGGCACAGCACAGCACCCCGTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NKESQPLGRSCM*SRRHSTAPRVP Trigger: AGGGACACGGGGTGCTGTGCTGTGCCGACGGCTCCACATACAAGAGCGCCCCAGAGGCTGACTTTCCTTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127457.2 |
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| CDS TCA 72 bp | TTGTCATGGAAGGAACCCTGGTATACCTGCCCGTCCTaGTCCTCCAGAAACCCCTGCCCTTCCCTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSWKEPWYTCPS*SSRNPCPSLRP Trigger: AGGCCTGAGGGAAGGGCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATACCAGGGTTCCTTCCATGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 |
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| CDS TCA 72 bp | GGCCCAGGAAGGGAGGGCTGGTCACATCACAGACCATaGGCACATACTCCCCTAGATATGCAGCTGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPGREGWSHHRP*AHTPLDMQLSV Trigger: CACCGACAGCTGCATATCTAGGGGAGTATGTGCTCATGGTCTGTGATGTGACCAGCCCTCCCTTCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS TCA 72 bp | GTGGCCGTTAATGAACATCCCACAGTAGGTGACTCCTaGGCAGTGGACCAAGCTGCCGAGTCCACTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VAVNEHPTVGDS*AVDQAAESTED Trigger: GTCTTCAGTGGACTCGGCAGCTTGGTCCACTGCTCAGGAGTCACCTACTGTGGGATGTTCATTAACGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
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| CDS TCA 72 bp | GCTCCCCTTCATAGCGACCTCCGGCTTTGTACTTCATaGCGCCGTGCCCTTGAGGCTCTCCTAAAACAAACT | + |
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Preference number: 6 (lower is better) Translates to: APLHSDLRLCTS*RRALEALLKQT Trigger: AGTTTGTTTTAGGAGAGCCTCAAGGGCACGGCGTCATGAAGTACAAAGCCGGAGGTCGCTATGAAGGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 |
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| CDS TCA 72 bp | AGAGTATTCTGGGAGTTGCACATATCTGACTCCTGCTaGGATCTTCAGGACCCGGCCACTCTCACTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: RVFWELHISDSC*DLQDPATLTFG Trigger: GCCAAAAGTGAGAGTGGCCGGGTCCTGAAGATCTCAGCAGGAGTCAGATATGTGCAACTCCCAGAATACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030915.11 |
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| CDS CAA 72 bp | TTCTTAAAGATCATCTGCCCACGGCCATGTCTCTTGTaGTCATGGAAGGAACCCTGGTATACCTGCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: FLKIICPRPCLL*SWKEPWYTCPS Trigger: GGACGGGCAGGTATACCAGGGTTCCTTCCATGACAACAAGAGACATGGCCGTGGGCAGATGATCTTTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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| CDS CAA 90 bp | GTTTCTTGCCTCCCTTCCATTCTCCTTCATAGCGGAAGAAAGAATTaGGGTATACATATACGCCATAGCCGTTTCGCGGCGGCAGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: VSCLPSILLHSGRKN*GIHIRHSRFAAAVS Trigger: CGAGACTGCCGCCGCGAAACGGCTATGGCGTATATGTATACCCAAATTCTTTCTTCCGCTATGAAGGAGAATGGAAGGGAGGCAAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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| CDS GCA 72 bp | CTCTGGACCCAGAATCACAATTTTCTTAGCCTGTTCTaGTGGGTGGCCGTTAATGAACATCCCACAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: LWTQNHNFLSLF*WVAVNEHPTVG Trigger: ACCTACTGTGGGATGTTCATTAACGGCCACCCAGCAGAACAGGCTAAGAAAATTGTGATTCTGGGTCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
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| CDS CCA 72 bp | TGGACCCAGAATCACAATTTTCTTAGCCTGTTCTGCTaGGTGGCCGTTAATGAACATCCCACAGTAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: WTQNHNFLSLFC*VAVNEHPTVGD Trigger: GTCACCTACTGTGGGATGTTCATTAACGGCCACCCAGCAGAACAGGCTAAGAAAATTGTGATTCTGGGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030915.11 ENSMUST00000132367.8 |
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| CDS CAA 72 bp | CTCCCTTCCATTCTCCTTCATAGCGGAAGAAAGAATTaGGGTATACATATACGCCATAGCCGTTTCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPSILLHSGRKN*GIHIRHSRFAA Trigger: CGCCGCGAAACGGCTATGGCGTATATGTATACCCAAATTCTTTCTTCCGCTATGAAGGAGAATGGAAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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| CDS GCA 72 bp | TCACCTTCGTACTTGTCACCATTCTTAAAGATCATCTaGCCACGGCCATGTCTCTTGTTGTCATGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPSYLSPFLKII*PRPCLLLSWKE Trigger: TTCCTTCCATGACAACAAGAGACATGGCCGTGGGCAGATGATCTTTAAGAATGGTGACAAGTACGAAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030915.11 ENSMUST00000127457.2 ENSMUST00000132367.8 ENSMUST00000155775.8 |
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