Pregenerated sensors for MORC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031434Ensembl transcript IDs: ENSMUST00000033811.14, ENSMUST00000087401.12, ENSMUST00000136415.9, ENSMUST00000165274.2, ENSMUST00000167664.2, ENSMUST00000171896.2
Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTACAATAACCGCCTGCGCCTGGATACACTCCAGGTAGGTCTGTaGCAGAAGTCCAACGGCGAGAGTATTCCCATTCTTGGTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: WYNNRLRLDTLQVGL*QKSNGESIPILGED Trigger: GTCTTCACCAAGAATGGGAATACTCTCGCCGTTGGACTTCTGTCACAGACCTACCTGGAGTGTATCCAGGCGCAGGCGGTTATTGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR TCA 90 bp | GTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCTaGGTCATACCCGATCTCACGAAGCTCCAAGTGAGGGAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: VICFQHCVQDPIHLF*VIPDLTKLQVREDR Trigger: TCTGTCCTCCCTCACTTGGAGCTTCGTGAGATCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR CCA 90 bp | CACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTaGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: HRHKGEKKATRGYIA*CSVQYVICFQHCVQ Trigger: CTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR GCA 90 bp | AGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTaGTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: RHKGEKKATRGYIAW*SVQYVICFQHCVQD Trigger: ATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR CCA 90 bp | ATCTTTTATGACAATAAAAACACCATGGAACACTTGTGCGGTGGCTaGCAGCTTTCCTTTACTCTAGTCTATTGTTGTTACCAAACACAT | + |
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Preference number: 1 (lower is better) Translates to: IFYDNKNTMEHLCGG*QLSFTLVYCCYQTH Trigger: ATGTGTTTGGTAACAACAATAGACTAGAGTAAAGGAAAGCTGCCAGCCACCGCACAAGTGTTCCATGGTGTTTTTATTGTCATAAAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR TCA 90 bp | AGGAGGAGAAGAGATGACATGAAGTCATTAGCCAACAGAATAAAATaGAGTCCCTTCAAAATGGGCCTACATTTCTTAACAATTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RRRRDDMKSLANRIK*SPFKMGLHFLTILS Trigger: AGACAGAATTGTTAAGAAATGTAGGCCCATTTTGAAGGGACTTCATTTTATTCTGTTGGCTAATGACTTCATGTCATCTCTTCTCCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR TCA 90 bp | GAAATCATTACTTATCCCACCAAGCACATTGGACCCAACATTTGCTaGCTGGTTTCACCTAAATTAATACAAACCATTATCAGGAATATG | + |
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Preference number: 1 (lower is better) Translates to: EIITYPTKHIGPNIC*LVSPKLIQTIIRNM Trigger: CATATTCCTGATAATGGTTTGTATTAATTTAGGTGAAACCAGTCAGCAAATGTTGGGTCCAATGTGCTTGGTGGGATAAGTAATGATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR CAA 90 bp | TTGGTGAAGACAAGAGCATCCTTTCCTAGTCGCATGGAACCCGACTaGAAACCATTACCAAAGACCCCGATGGGACGCTGGCTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LVKTRASFPSRMEPD*KPLPKTPMGRWLFF Trigger: AAAGAAAAGCCAGCGTCCCATCGGGGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGCGACTAGGAAAGGATGCTCTTGTCTTCACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGTCCAACGGCGAGAGTATTCCCATTCTTGGTGAAGACAAGAGCATCCTTGCATGGAACCCGACTTaGAACCATTACCAAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: QKSNGESIPILGEDKSILAWNPT*NHYQRP Trigger: GGGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGC...AAGGATGCTCTTGTCTTCACCAAGAATGGGAATACTCTCGCCGTTGGACTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR CAA 90 bp | AGCTACGAGAGGATATATAGCCTGGTGCTCAGTCCAGTATGTGATTaGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SYERIYSLVLSPVCD*LPALCTGSHPLVLS Trigger: ACTCAGAACAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTATCACGAAGCTCCAAGTaGGGGAGGACAGAAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: NKTREDIQYTGTREKRKLSRSSK*GRTEVR Trigger: CCTTACTTCTGTCCTCCCTCACTTGGAGCTTCGTGA...TAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR-3UTR TCA 90 bp | TTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAGGACACGTAGCCGAGTaGGCCTGGCCAAAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LFGNVRRATRMLEKNCSVGHVAE*AWPKPC Trigger: ACAGGGCTTTGGCCAGGCTCACTCGGCTACGTGTCC...TACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR CAA 90 bp | CCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTTCACTCTaGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PPKHQPSLRVPSCSL*KASFRSHLWCTAFL Trigger: AAGGAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR-3UTR TCA 90 bp | ATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCGGCCAAAGCCCTGTATaGTGGAGTGAAGGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IKIKAFRSPNLVTIAFLFGQSPV*WSEGAG Trigger: TCCTGCCCCTTCACTCCATCATACAGGGCTTTGGCC...GAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGGGATATATAGCCTGGTaGTCAGTCCAGTATGTGATT | + |
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Preference number: 2 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKGYIAW*SVQYVI Trigger: AATCACATACTGGACTGAGCACCAGGCTATATATCC...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR CAA 90 bp | GTCATGCCACATCCGTCATCAGTAAAGGTCAAACACGGTTTCTTCTaGACTTCCTCAACATCTATAAAGACTGTCCTGGCAGATACATCT | + |
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Preference number: 2 (lower is better) Translates to: VMPHPSSVKVKHGFF*TSSTSIKTVLADTS Trigger: AGATGTATCTGCCAGGACAGTCTTTATAGATGTTGAGGAAGTCAAGAAGAAACCGTGTTTGACCTTTACTGATGACGGATGTGGCATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCAAGAGGATATATAGCCTaGTGCTCAGTCCAGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSRGYIA*CSVQYV Trigger: CACATACTGGACTGAGCACCAGGCTATATATCCTCT...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR-3UTR TCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTCCCATCCACTTGTTCTaGGTCATACCCGATCTCACG | + |
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Preference number: 2 (lower is better) Translates to: FIWQCKEGNKNVREKLQCPIHLF*VIPDLT Trigger: CGTGAGATCGGGTATGACTCAGAACAAGTGGATGGG...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGAACTCTGCCAACAGAATAAAATaGAGTCCCTTCAAAATGGGC | + |
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Preference number: 2 (lower is better) Translates to: KAFRSPNLVTIAFLFLNSANRIK*SPFKMG Trigger: GCCCATTTTGAAGGGACTTCATTTTATTCTGTTGGC...AGAGTTCAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR TCA 72 bp | AACCGCCTGCGCCTGGATACACTCCAGGTAGGTCTGTaGCAGAAGTCCAACGGCGAGAGTATTCCCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: NRLRLDTLQVGL*QKSNGESIPIL Trigger: AAGAATGGGAATACTCTCGCCGTTGGACTTCTGTCACAGACCTACCTGGAGTGTATCCAGGCGCAGGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR TCA 72 bp | TTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCTaGGTCATACCCGATCTCACGAAGCTCCAAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: FQHCVQDPIHLF*VIPDLTKLQVR Trigger: CCTCACTTGGAGCTTCGTGAGATCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACAGTGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| 3UTR TCA 72 bp | ACAGAAGTCCAACGGCGAGAGTATTCCCATTCTTGGTaGAGACAAGAGCATCCTTTCCTAGTCGCATGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TEVQRREYSHSW*RQEHPFLVAWN Trigger: GTTCCATGCGACTAGGAAAGGATGCTCTTGTCTTCACCAAGAATGGGAATACTCTCGCCGTTGGACTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| 3UTR GCA 72 bp | GGATATATAGCCTGGTGCTCAGTCCAGTATGTGATTTaGTTCCAGCACTGTGTACAGGATCCCATCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: GYIAWCSVQYVI*FQHCVQDPIHL Trigger: CAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR TCA 72 bp | GTGCTTCCAACTAGATTGCTAGAACCTTGGCAGGGCTaGAATCATTACTTATCCCACCAAGCACATTGGACC | + |
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Preference number: 3 (lower is better) Translates to: VLPTRLLEPWQG*NHYLSHQAHWT Trigger: GGTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAATCTAGTTGGAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCAATCCCACCAAGCACATaGGACCCAACATTTGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSIPPST*DPTFAD Trigger: GTCAGCAAATGTTGGGTCCAATGTGCTTGGTGGGAT...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR GCA 72 bp | GGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTaGTCAGTCCAGTATGTGATTTGCTTCCAGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: GEKKATRGYIAW*SVQYVICFQHC Trigger: ACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR CCA 72 bp | AAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTaGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KGEKKATRGYIA*CSVQYVICFQH Trigger: GTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATTCAGGTCACCTAACTaGGTGACTATTGCTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSFRSPN*VTIAFL Trigger: CAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAA...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR CCA 72 bp | TCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTaGATACCACTCATACACACCATACCCTTCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SFKPLYSIFHVM*IPLIHTIPFSV Trigger: TACAGAGAAGGGTATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| 3UTR TCA 72 bp | AGAGATGACATGAAGTCATTAGCCAACAGAATAAAATaGAGTCCCTTCAAAATGGGCCTACATTTCTTAACA | + |
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Preference number: 3 (lower is better) Translates to: RDDMKSLANRIK*SPFKMGLHFLT Trigger: TGTTAAGAAATGTAGGCCCATTTTGAAGGGACTTCATTTTATTCTGTTGGCTAATGACTTCATGTCATCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR TCA 90 bp | TATATAGCCTGGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGTGCTCAGGCGGATCCTaGAGGCCTGCGGGACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YIAWCSVQYVICFQHCVQCSGGS*RPAGRC Trigger: GCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCA...CTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR TCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTAAPRWH*RVACGC Trigger: GCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGC...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR GCA 90 bp | TGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTGTGGCTGCTGGAGTTaGTCTGGAGGTAGCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: CSVQYVICFQHCVQDPIHCGCWS*SGGSGG Trigger: GCCCCCGCTACCTCCAGAGCAACTCCAGCAGCCACA...GTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR TCA 90 bp | ATTGCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IARTLAGLKSLLIPPSTLAPRWH*RVACGC Trigger: GCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGC...CAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR GCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATTGTGGCTGCTGGAGTTaGTCTGGAGGTAGCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDCGCWS*SGGSGG Trigger: GCCCCCGCTACCTCCAGAGCAACTCCAGCAGCCACA...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR TCA 90 bp | CCATTACCAAAGACCCCGATGGGACGCTGGCTTTTCTTTATTACTTTATCTGTATGCTCAGGCGGATCCTaGAGGCCTGCGGGACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLPKTPMGRWLFFITLSVCSGGS*RPAGRC Trigger: GCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCA...TACAGATAAAGTAATAAAGAAAAGCCAGCGTCCCATCGGGGTCTTTGGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATGGAAGCAGGAACCCCTaGTCTTGGTCCTGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDGSRNP*SWSWDP Trigger: AGGGTCCCAGGACCAAGATCAGGGGTTCCTGCTTCC...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | TCAACCATAATCCTACCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTGGACACGTAGCCGAGTaGGCCTGGCCAAAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: STIILPPKHQPSLRVPSCGHVAE*AWPKPW Trigger: CCAGGGCTTTGGCCAGGCTCACTCGGCTACGTGTCC...ACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGGTAGGATTATGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | GTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCAGGGTCGCGTGTGGCTaGTGGAGTTGCTCTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VQYVICFQHCVQDPIHLFRVACG*WSCSGG Trigger: ACCTCCAGAGCAACTCCAGCAGCCACACGCGACCCT...GAACAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR CCA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGTCGCGTGTGGCTGCTaGAGTTGCTCTGGAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RQGRTFSTQAQGRKESYEVACGC*SCSGGS Trigger: GCTACCTCCAGAGCAACTCCAGCAGCCACACGCGAC...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CCA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACCTGAAGGGTCGCGTGTaGCTGCTGGAGTTGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDLKGRV*LLELLW Trigger: CCAGAGCAACTCCAGCAGCCACACGCGACCCTTCAG...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CCA 90 bp | TGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGGTCCTGGGACCCTaGACAAAGTGCTGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CSVQYVICFQHCVQDPIHLVLGP*TKCWGF Trigger: GAAGCCCCAGCACTTTGTCCAGGGTCCCAGGACCAA...GTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| 3UTR CAA 72 bp | ACAAGAGCATCCTTTCCTAGTCGCATGGAACCCGACTaGAAACCATTACCAAAGACCCCGATGGGACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRASFPSRMEPD*KPLPKTPMGRW Trigger: CCAGCGTCCCATCGGGGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGCGACTAGGAAAGGATGCTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| CDS-3UTR TCA 90 bp | CACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGCTCAGTCCAGCTCCAGGTAGGTCTGTaGCAGAAGTCCAACGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: HKGEKKATRGYIAWCSVQLQVGL*QKSNGE Trigger: CTCGCCGTTGGACTTCTGTCACAGACCTACCTGGAG...CTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR TCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGACACGTAGCCGAGTaGGCCTGGCCAAAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRGHVAE*AWPKPF Trigger: AAAGGGCTTTGGCCAGGCTCACTCGGCTACGTGTCC...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087401.12 |
||
| CDS-3UTR GCA 90 bp | AGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGAGGGTCGCGTGTGGCTaGTGGAGTTGCTCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STQAQGRKESYERIYSLVRVACG*WSCSGG Trigger: ACCTCCAGAGCAACTCCAGCAGCCACACGCGACCCT...CACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CCA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCACTGAAGGGTCGCGTGTaGCTGCTGGAGTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTHHKCEAHRLRARTHSLKGRV*LLELLW Trigger: CCAGAGCAACTCCAGCAGCCACACGCGACCCTTCAG...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR GCA 90 bp | AGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGGGACCCTGGACAAAGTaGTGGGGCTTCCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STQAQGRKESYERIYSLVGPWTK*WGFPVL Trigger: GAGAACAGGGAAGCCCCAGCACTTTGTCCAGGGTCC...CACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGACCCTGGACAAAGTaGTGGGGCTTCCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRGPWTK*WGFPVL Trigger: GAGAACAGGGAAGCCCCAGCACTTTGTCCAGGGTCC...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCACCCTGGACAAAGTGCTaGGGCTTCCCTGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTHHKCEAHRLRARTHSPWTKC*GFPVLL Trigger: GAGGAGAACAGGGAAGCCCCAGCACTTTGTCCAGGG...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATTTCCTTTTCCAGCAGTaGCTGCAGGAGCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDFLFQQ*LQEPQK Trigger: CTTCTGCGGCTCCTGCAGCCACTGCTGGAAAAGGAA...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGTTCCTTTTCCAGCAGTaGCTGCAGGAGCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDKGGHSVHRHKGEKKATFLFQQ*LQEPQK Trigger: CTTCTGCGGCTCCTGCAGCCACTGCTGGAAAAGGAA...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGGCCTGGCCAAAGCCCTaGGCCTTCTGCAATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKAWPKP*AFCNTS Trigger: GGAAGTATTGCAGAAGGCCCAGGGCTTTGGCCAGGC...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACTCACGAAGCTCCAAGTaGGGGAGGACAGAAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDSRSSK*GRTEVR Trigger: CCTTACTTCTGTCCTCCCTCACTTGGAGCTTCGTGA...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATCTTTCCATCGGCTTCTaGTTCTTCTCAGCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDLSIGF*FFSAAS Trigger: CGAGGCTGCTGAGAAGAAGCAGAAGCCGATGGAAAG...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTTTTTCCAGCAGTGGCTaGAGGAGCCGCAGAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPVCDLLPALCTGSHPLFSSSG*RSRRRV Trigger: TACTCTTCTGCGGCTCCTGCAGCCACTGCTGGAAAA...AAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAATGCTCAGGCGGATCCTaGAGGCCTGCGGGACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQCSGGS*RPAGRC Trigger: GCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCA...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGCATGGAACCCGACTTaGAACCATTACCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPVCDLLPALCTGSHPLAWNPT*NHYQRP Trigger: GGGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGC...AAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
||
| CDS-3UTR TCA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACGCATGGAACCCGACTTaGAACCATTACCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDAWNPT*NHYQRP Trigger: GGGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGC...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCACTCCAGGTAGGTCTGTaGCAGAAGTCCAACGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSLQVGL*QKSNGE Trigger: CTCGCCGTTGGACTTCTGTCACAGACCTACCTGGAG...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR TCA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGGAAGCAGGAACCCCTaGTCTTGGTCCTGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNVRRATRMLEKNCSVKRGSRNP*SWSWDP Trigger: AGGGTCCCAGGACCAAGATCAGGGGTTCCTGCTTCC...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGACCCATCCACTTGTTCTaGGTCATACCCGATCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRPIHLF*VIPDLT Trigger: CGTGAGATCGGGTATGACTCAGAACAAGTGGATGGG...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087401.12 |
||
| CDS-3UTR GCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCCTTTCCATCGGCTTCTaGTTCTTCTCAGCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTALSIGF*FFSAAS Trigger: CGAGGCTGCTGAGAAGAAGCAGAAGCCGATGGAAAG...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGATATATAGCCTGGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTCTTTCCATCGGCTTCTaGTTCTTCTCAGCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGYIAWCSVQYVICFQHCLSIGF*FFSAAS Trigger: CGAGGCTGCTGAGAAGAAGCAGAAGCCGATGGAAAG...ACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGTGGGTAGGCGGTAGCTaGTTCTACCCTCCTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTFSTQAQGRKESYEWVGGS*FYPPVK Trigger: TTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCA...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCGAGACCTGGGCCTTCTaGAATACTTCCAGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTAETWAF*NTSRCD Trigger: GTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTC...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CCA 90 bp | AAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGAACTCTGTCGCGTGTGGCTGCTaGAGTTGCTCTGGAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAFRSPNLVTIAFLFLNSVACGC*SCSGGS Trigger: GCTACCTCCAGAGCAACTCCAGCAGCCACACGCGAC...AGAGTTCAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CCA 90 bp | TGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTACCAAAGACCCCGATaGGACGCTGGCTTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSVQYVICFQHCVQDPIHYQRPR*DAGFSL Trigger: TAAAGAAAAGCCAGCGTCCCATCGGGGTCTTTGGTA...GTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR CCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCACCCTGGACAAAGTGCTaGGGCTTCCCTGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSPWTKC*GFPVLL Trigger: GAGGAGAACAGGGAAGCCCCAGCACTTTGTCCAGGG...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCTTGGTCCTGGGACCCTaGACAAAGTGCTGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFLVLGP*TKCWGF Trigger: GAAGCCCCAGCACTTTGTCCAGGGTCCCAGGACCAA...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | AGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGTTCCGGAAGGAGACCTaGGCCTTCTGCAATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STQAQGRKESYERIYSLVFRKET*AFCNTS Trigger: GGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAA...CACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| 3UTR CAA 72 bp | TGTGACAGAAGTCCAACGGCGAGAGTATTCCCATTCTaGGTGAAGACAAGAGCATCCTTTCCTAGTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CDRSPTARVFPF*VKTRASFPSRM Trigger: CATGCGACTAGGAAAGGATGCTCTTGTCTTCACCAAGAATGGGAATACTCTCGCCGTTGGACTTCTGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| CDS-3UTR GCA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGTGGGTAGGCGGTAGCTaGTTCTACCCTCCTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKWVGGS*FYPPVK Trigger: TTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCA...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGGAATACTCTGTTTCTaGCAGCTCAGAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTFSTQAQGRKESYEGILCF*QLRGNT Trigger: GGTGTTACCTCTGAGCTGCCAGAAACAGAGTATTCC...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAATCTTGCAGGTAATGTaGATGGATCCACCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRILQVM*MDPPSR Trigger: CCGGGATGGTGGATCCATCCACATTACCTGCAAGAT...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | TTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATTGGTCCTGGGACCCTaGACAAAGTGCTGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNHSTLSSMSCGYHSYTPLVLGP*TKCWGF Trigger: GAAGCCCCAGCACTTTGTCCAGGGTCCCAGGACCAA...TGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCTTCCTTTTCCAGCAGTaGCTGCAGGAGCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFFLFQQ*LQEPQK Trigger: CTTCTGCGGCTCCTGCAGCCACTGCTGGAAAAGGAA...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCACTGGGTATTCTGGTATaGGATGTGGTGGTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTHHKCEAHRLRARTHSLGILV*DVVVYF Trigger: GAAGTACACCACCACATCTCATACCAGAATACCCAG...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGCTCAGTCCAGAACCCATGTGCTTCTTaGTCCAGTATATGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKGEKKATRGYIAWCSVQNPCAS*SSICLL Trigger: CAGAAGGCATATACTGGAGCAAGAAGCACATGGGTT...CTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGGCTGAATGGAACAATTaGTACAATAACCGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKAEWNN*YNNRLR Trigger: GCGCAGGCGGTTATTGTACCAATTGTTCCATTCAGC...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | GAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCCAGGTTGGCTTTAACTaGCAGCCTGCTTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETRQGRTFSTQAQGRKESQVGFN*QPAFSK Trigger: CTTTGAGAAAGCAGGCTGCCAGTTAAAGCCAACCTG...GCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCAACCATAATCCTACCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTATCTTGCAGGTAATGTaGATGGATCCACCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STIILPPKHQPSLRVPSCILQVM*MDPPSR Trigger: CCGGGATGGTGGATCCATCCACATTACCTGCAAGAT...ACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGGTAGGATTATGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCTGAGGAGGAGTCTTTGGTaGATTACTGAAGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVCDLLPALCTGSHPLVLRRSLW*ITEDLV Trigger: TACCAGGTCTTCAGTAATCCACCAAAGACTCCTCCT...CAGAACAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | GACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAAGGAGGAGTCTTTGGTaGATTACTGAAGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DKGGHSVHRHKGEKKATRRRSLW*ITEDLV Trigger: TACCAGGTCTTCAGTAATCCACCAAAGACTCCTCCT...TCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACAGCGGCATCTCAGTTTaGATCTTCCTTCGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDSGISV*IFLRFS Trigger: AGAGAAACGAAGGAAGATCCAAACTGAGATGCCGCT...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCGCTGTTTTCTCCTTCTaGGTAGGCGGTAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFAVFSF*VGGSCF Trigger: GAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGC...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCAGCTGTTTTCTCCTTCTaGGTAGGCGGTAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSAVFSF*VGGSCF Trigger: GAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGC...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTCTTGCTTCTCCTCTTTaGTTCTTTCTAGCTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPVCDLLPALCTGSHPLLASPL*FFLARL Trigger: AAGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAG...AAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACTTGTTCCTTGCTTCTCCTCTTTaGTTCTTTCTAGCTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQYVICFQHCVQDPIHLFLASPL*FFLARL Trigger: AAGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAG...GAACAAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| 3UTR CAA 72 bp | AGGATATATAGCCTGGTGCTCAGTCCAGTATGTGATTaGCTTCCAGCACTGTGTACAGGATCCCATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIYSLVLSPVCD*LPALCTGSHPL Trigger: AAGTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGATCCGGATATTCCAAATaGGAACTCGGGTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRSGYSK*ELGCLF Trigger: AAAAAGGCACCCGAGTTCTCATTTGGAATATCCGGA...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAAGAGAATCCAAACGTaGTTCTCACCTGCTTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRTFSTQAQGRKESYEKRIQT*FSPAYS Trigger: CGAATAAGCAGGTGAGAATCACGTTTGGATTCTCTT...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCGGAAATTGCACTCAATaGCTCCAATTACTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETRQGRTFSTQAQGRKESGNCTQ*LQLLPH Trigger: GTGTGGGAGTAATTGGAGTCATTGAGTGCAATTTCC...GCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACCTGGGGCTATTGATTTaGTCATATCCAATTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVQYVICFQHCVQDPIHLGLLI*SYPIVL Trigger: CAAGACAATTGGATATGAGCAAATCAATAGCCCCAG...GTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGTCTCTTCCAGGATTCTaGTCTCTTTCTTTTGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QDKGGHSVHRHKGEKKATSLPGF*SLSFAY Trigger: GTAGGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGA...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TCAACCATAATCCTACCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTTCTTGCTCCAGTATATaGCTTCTGTCTCCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: STIILPPKHQPSLRVPSCSCSSI*LLSPGY Trigger: GTACCCAGGAGACAGAAGGCATATACTGGAGCAAGA...ACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGGTAGGATTATGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCAACCCATGTGCTTCTTaGTCCAGTATATGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTANPCAS*SSICLL Trigger: CAGAAGGCATATACTGGAGCAAGAAGCACATGGGTT...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | ATTGCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGCAGGTTGGCTTTAACTaGCAGCCTGCTTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IARTLAGLKSLLIPPSTLQVGFN*QPAFSK Trigger: CTTTGAGAAAGCAGGCTGCCAGTTAAAGCCAACCTG...CAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAAGGAGGAGTCTTTGGTaGATTACTGAAGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRRRSLW*ITEDLV Trigger: TACCAGGTCTTCAGTAATCCACCAAAGACTCCTCCT...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAAGCGGCATCTCAGTTTaGATCTTCCTTCGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRSGISV*IFLRFS Trigger: AGAGAAACGAAGGAAGATCCAAACTGAGATGCCGCT...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATTGGTATGAGATGTGGTaGTGTACTTCTCTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDWYEMW*CTSLRT Trigger: AGTTCTGAGAGAAGTACACCACCACATCTCATACCA...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATTTCTGGTATGAGATGTaGTGGTGTACTTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: REDIQYTGTREKRKLREDFWYEM*WCTSLR Trigger: TCTGAGAGAAGTACACCACCACATCTCATACCAGAA...ATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCCTTGCTTCTCCTCTTTaGTTCTTTCTAGCTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAVEWASFFTPTINVKHTLASPL*FFLARL Trigger: AAGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAG...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGAACTCTTTCCGGAAGGAGACCTaGGCCTTCTGCAATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAFRSPNLVTIAFLFLNSFRKET*AFCNTS Trigger: GGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAA...AGAGTTCAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCTATTCCCATTCTTGGTaGAGACAAGAGCATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAVEWASFFTPTINVKHTYSHSW*RQEHPF Trigger: GAAAGGATGCTCTTGTCTTCACCAAGAATGGGAATA...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGGATCCCATCCACATAAGGCGGTTGTTATaGTACATCATAACTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVQYVICFQHCVQDPIHIRRLL*YIITPN Trigger: GTTTGGAGTTATGATGTATCATAACAACCGCCTTAT...GTGGATGGGATCCTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | GGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATACTTTCTGGAAATCTaGAAAGCACTGGAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRTFSTQAQGRKESYERIYFLEI*KALESR Trigger: TCTGGATTCCAGTGCTTTTCAGATTTCCAGAAAGTA...TATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCCTGGGTATTCTGGTATaGGATGTGGTGGTGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFLGILV*DVVVYF Trigger: GAAGTACACCACCACATCTCATACCAGAATACCCAG...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | CACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGCTCAGTCCAGCTCTGTATGCTTGTTTaGTTCTGGGTATTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HKGEKKATRGYIAWCSVQLCMLV*FWVFWY Trigger: ATACCAGAATACCCAGAATCAAACAAGCATACAGAG...CTGGACTGAGCACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCCAATACTTCCAGGTGTaGCTCTGTCTCTTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTAQYFQV*LCLFQF Trigger: AAACTGAAAGAGACAGAGTCACACCTGGAAGTATTG...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGCAATACTTCCAGGTGTaGCTCTGTCTCTTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKQYFQV*LCLFQF Trigger: AAACTGAAAGAGACAGAGTCACACCTGGAAGTATTG...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACGGTACAATAACCGCCTaGGCCTGGATACACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHGTITA*AWIHSR Trigger: CCTGGAGTGTATCCAGGCGCAGGCGGTTATTGTACC...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR GCA 90 bp | GACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGACTGTTCTCCTCTGTATaGTTGTTTGATTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DKGGHSVHRHKGEKKATRLFSSV*LFDSGY Trigger: ATACCCAGAATCAAACAAGCATACAGAGGAGAACAG...TCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAGGACCCTGGACAAAGTaGTGGGGCTTCCCTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQGPWTK*WGFPVL Trigger: GAGAACAGGGAAGCCCCAGCACTTTGTCCAGGGTCC...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCTCTCTTCCAGGATTCTaGTCTCTTTCTTTTGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KAVEWASFFTPTINVKHTSLPGF*SLSFAY Trigger: GTAGGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGA...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGCTCCTCTACCTTTTaGTGGAACAAATTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QDKGGHSVHRHKGEKKATSSSTF*WNKFLS Trigger: TGAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCT...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | GGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATAAGCTCCTCTACCTTTTaGTGGAACAAATTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTFSTQAQGRKESYERISSSTF*WNKFLS Trigger: TGAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCT...TATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGATCTTGCAGGTAATGTaGATGGATCCACCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNVRRATRMLEKNCSVKRILQVM*MDPPSR Trigger: CCGGGATGGTGGATCCATCCACATTACCTGCAAGAT...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCTGGTATGAGATGTGGTaGTGTACTTCTCTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KAVEWASFFTPTINVKHTWYEMW*CTSLRT Trigger: AGTTCTGAGAGAAGTACACCACCACATCTCATACCA...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATATAGCCTGGTGTTCTGGTATGAGATGTaGTGGTGTACTTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STQAQGRKESYERIYSLVFWYEM*WCTSLR Trigger: TCTGAGAGAAGTACACCACCACATCTCATACCAGAA...CACCAGGCTATATATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAACCCTGGACAAAGTGCTaGGGCTTCCCTGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQPWTKC*GFPVLL Trigger: GAGGAGAACAGGGAAGCCCCAGCACTTTGTCCAGGG...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | GACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGTTCCAATTTTTCCGTaGTTCTCTTCAATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DKGGHSVHRHKGEKKATRVPIFP*FSSILP Trigger: CGGAAGAATTGAAGAGAACCACGGAAAAATTGGAAC...TCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| 3UTR CAA 72 bp | GCAGGGCTGAAATCATTACTTATCCCACCAAGCACATaGGACCCAACATTTGCTGACTGGTTTCACCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKSLLIPPST*DPTFADWFHLN Trigger: ATTTAGGTGAAACCAGTCAGCAAATGTTGGGTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | ATTGCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGTATTCCCATTCTTGGTaGAGACAAGAGCATCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IARTLAGLKSLLIPPSTLYSHSW*RQEHPF Trigger: GAAAGGATGCTCTTGTCTTCACCAAGAATGGGAATA...CAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCGGAAATTGCACTCAATaGCTCCAATTACTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFGNCTQ*LQLLPH Trigger: GTGTGGGAGTAATTGGAGTCATTGAGTGCAATTTCC...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGTCTTGCTCCAGTATATaGCTTCTGTCTCCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNVRRATRMLEKNCSVKRSCSSI*LLSPGY Trigger: GTACCCAGGAGACAGAAGGCATATACTGGAGCAAGA...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACGAGACCTGGGCCTTCTaGAATACTTCCAGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHETWAF*NTSRCD Trigger: GTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTC...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGACTCCAAACTGGTTATaGTATTTGCAAGAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDKGGHSVHRHKGEKKATTPNWL*YLQENP Trigger: TGGATTCTCTTGCAAATACCATAACCAGTTTGGAGT...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATACAGGTTGGCTTTAACTaGCAGCCTGCTTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPLYSIFHVMWIPLIHTIQVGFN*QPAFSK Trigger: CTTTGAGAAAGCAGGCTGCCAGTTAAAGCCAACCTG...TATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACGCTGTTTTCTCCTTCTaGGTAGGCGGTAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHAVFSF*VGGSCF Trigger: GAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGC...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| 3UTR CAA 72 bp | CACCAACCATCATTAAGAGTGCCGTCATGTTCACTCTaGAAAGCTTCATTTAGGTCCCACTTATGGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HQPSLRVPSCSL*KASFRSHLWCT Trigger: AGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGGCACTCTTAATGATGGTTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| 3UTR CAA 72 bp | CGGTGGCTGGCAGCTTTCCTTTACTCTAGTCTATTGTaGTTACCAAACACATTTTTCACATTCTGGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWLAAFLYSSLL*LPNTFFTFWIG Trigger: CCCAATCCAGAATGTGAAAAATGTGTTTGGTAACAACAATAGACTAGAGTAAAGGAAAGCTGCCAGCCACCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTTTGTTTTGCTGGCTaGATGGAACAATTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: PSCSLLKASFRSHLWCTAFCFAG*MEQLVQ Trigger: TTGTACCAATTGTTCCATTCAGCCAGCAAAACAAAA...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGTCCGGATATTCCAAATaGGAACTCGGGTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNVRRATRMLEKNCSVKRSGYSK*ELGCLF Trigger: AAAAAGGCACCCGAGTTCTCATTTGGAATATCCGGA...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTATCACGAAGCTCCAAGTaGGGGAGGACAGAAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGNVRRATRMLEKNCSVSRSSK*GRTEVR Trigger: CCTTACTTCTGTCCTCCCTCACTTGGAGCTTCGTGA...TACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGATAGGAAGGAAATTTTCCAGCAGTGGCTaGAGGAGCCGCAGAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNVREKLQCKEGKKIGRKFSSSG*RSRRRV Trigger: TACTCTTCTGCGGCTCCTGCAGCCACTGCTGGAAAA...TTTCCTTCCTATCTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTTTCCAGCAGTGGCTaGAGGAGCCGCAGAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKFSSSG*RSRRRV Trigger: TACTCTTCTGCGGCTCCTGCAGCCACTGCTGGAAAA...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGGTCCAGTATGTGATTTaGTTCCAGCACTGTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGNKNVREKLQCKEGKKVQYVI*FQHCVQ Trigger: CTGTACACAGTGCTGGAAGCAAATCACATACTGGAC...CTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | TTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCAAGCGGCATCTCAGTTTaGATCTTCCTTCGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNHSTLSSMSCGYHSYTPSGISV*IFLRFS Trigger: AGAGAAACGAAGGAAGATCCAAACTGAGATGCCGCT...TGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCTTCTGGTATGAGATGTaGTGGTGTACTTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFFWYEM*WCTSLR Trigger: TCTGAGAGAAGTACACCACCACATCTCATACCAGAA...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| 3UTR CAA 72 bp | CATATCTTTTATGACAATAAAAACACCATGGAACACTaGTGCGGTGGCTGGCAGCTTTCCTTTACTCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HIFYDNKNTMEH*CGGWQLSFTLV Trigger: GACTAGAGTAAAGGAAAGCTGCCAGCCACCGCACAAGTGTTCCATGGTGTTTTTATTGTCATAAAAGATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
||
| CDS-3UTR TCA 90 bp | CACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATACCCTATAAGGCGGTTGTTATaGTACATCATAACTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSTLSSMSCGYHSYTPYPIRRLL*YIITPN Trigger: GTTTGGAGTTATGATGTATCATAACAACCGCCTTAT...AGGGTATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTATGGGTAGGCGGTAGCTaGTTCTACCCTCCTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFGNVRRATRMLEKNCSVWVGGS*FYPPVK Trigger: TTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCA...TACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCACTGCTCTCTTTCTTTTaGCTACAAATTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNHSTLSSMSCGYHSYTPLLSFF*LQIPPC Trigger: ACAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAG...TGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATATCTCTTCCAGGATTCTaGTCTCTTTCTTTTGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPLYSIFHVMWIPLIHTISLPGF*SLSFAY Trigger: GTAGGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGA...TATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGATTCTTATATTCAGAATaGCAGTGGTTTTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTREDIQYTGTREKRKLRFLYSE*QWFFSC Trigger: ACAGGAGAAAAACCACTGGCATTCTGAATATAAGAA...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCAACCATAATCCTACCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTGTTTTGCTGGCTGAATaGAACAATTGGTACAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: STIILPPKHQPSLRVPSCVLLAE*NNWYNN Trigger: GTTATTGTACCAATTGTTCCATTCAGCCAGCAAAAC...ACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGGTAGGATTATGGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | AACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTAACTCCAAACTGGTTATaGTATTTGCAAGAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKTREDIQYTGTREKRKLTPNWL*YLQENP Trigger: TGGATTCTCTTGCAAATACCATAACCAGTTTGGAGT...TAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCTCAATTTGTACTTTCTaGAAATCTGAAAAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAVEWASFFTPTINVKHTSICTF*KSEKHW Trigger: CCAGTGCTTTTCAGATTTCCAGAAAGTACAAATTGA...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGTATTCAGAATGCCAGTaGTTTTTCTCCTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGNKNVREKLQCKEGKKYSECQ*FFSCSS Trigger: GCTGGAACAGGAGAAAAACCACTGGCATTCTGAATA...CTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACGGAAATTGCACTCAATaGCTCCAATTACTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHGNCTQ*LQLLPH Trigger: GTGTGGGAGTAATTGGAGTCATTGAGTGCAATTTCC...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGTACTTTCTGGAAATCTaGAAAGCACTGGAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNVRRATRMLEKNCSVKRYFLEI*KALESR Trigger: TCTGGATTCCAGTGCTTTTCAGATTTCCAGAAAGTA...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | ATTGCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGTTCTTATATTCAGAATaGCAGTGGTTTTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IARTLAGLKSLLIPPSTLFLYSE*QWFFSC Trigger: ACAGGAGAAAAACCACTGGCATTCTGAATATAAGAA...CAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | ATCATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGGCTGAATGGAACAATTaGTACAATAACCGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IIKIKAFRSPNLVTIAFLAEWNN*YNNRLR Trigger: GCGCAGGCGGTTATTGTACCAATTGTTCCATTCAGC...CAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCAGTTTTGCTGGCTGAATaGAACAATTGGTACAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSVLLAE*NNWYNN Trigger: GTTATTGTACCAATTGTTCCATTCAGCCAGCAAAAC...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACTCGAATAGTTCAAGATaGCTTCTAGGCTGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHSNSSR*LLGWAK Trigger: CTTTGCCCAGCCTAGAAGCCATCTTGAACTATTCGA...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | ATCATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGGGAATACTCTGTTTCTaGCAGCTCAGAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: IIKIKAFRSPNLVTIAFLGILCF*QLRGNT Trigger: GGTGTTACCTCTGAGCTGCCAGAAACAGAGTATTCC...CAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGATAGGAAGGAAAGGAATACTCTGTTTCTaGCAGCTCAGAGGTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: KNVREKLQCKEGKKIGRKGILCF*QLRGNT Trigger: GGTGTTACCTCTGAGCTGCCAGAAACAGAGTATTCC...TTTCCTTCCTATCTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAACCCATGTGCTTCTTaGTCCAGTATATGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIWQCKEGNKNVREKLQCNPCAS*SSICLL Trigger: CAGAAGGCATATACTGGAGCAAGAAGCACATGGGTT...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTTCGAATAGTTCAAGATaGCTTCTAGGCTGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIWQCKEGNKNVREKLQCSNSSR*LLGWAK Trigger: CTTTGCCCAGCCTAGAAGCCATCTTGAACTATTCGA...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATCAACCGGTATTCTTTaGTATACTCAAAGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSSTGIL*YTQSLV Trigger: AACAAGACTTTGAGTATACCAAAGAATACCGGTTGA...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCTCAACCGGTATTCTTTaGTATACTCAAAGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLKASFRSHLWCTAFSTGIL*YTQSLV Trigger: AACAAGACTTTGAGTATACCAAAGAATACCGGTTGA...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACTATTCAGAATGCCAGTaGTTTTTCTCCTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHYSECQ*FFSCSS Trigger: GCTGGAACAGGAGAAAAACCACTGGCATTCTGAATA...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAGAGAATCCAAACGTaGTTCTCACCTGCTTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: FIWQCKEGNKNVREKLQCKRIQT*FSPAYS Trigger: CGAATAAGCAGGTGAGAATCACGTTTGGATTCTCTT...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | ATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCAATACTTCCAGGTGTaGCTCTGTCTCTTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKIKAFRSPNLVTIAFLFQYFQV*LCLFQF Trigger: AAACTGAAAGAGACAGAGTCACACCTGGAAGTATTG...GAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAACTGCTCTCTTTCTTTTaGCTACAAATTCCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKLLSFF*LQIPPC Trigger: ACAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAG...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGTCAACCGGTATTCTTTaGTATACTCAAAGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEGNKNVREKLQCKEGKKSTGIL*YTQSLV Trigger: AACAAGACTTTGAGTATACCAAAGAATACCGGTTGA...CTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | CAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTGGTATGAGATGTGGTaGTGTACTTCTCTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QTIIRNMKRAKYLLDHQNWYEMW*CTSLRT Trigger: AGTTCTGAGAGAAGTACACCACCACATCTCATACCA...ATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATATTCAGAATGCCAGTaGTTTTTCTCCTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKYSECQ*FFSCSS Trigger: GCTGGAACAGGAGAAAAACCACTGGCATTCTGAATA...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | AAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGATAAGGCGGTTGTTATaGTACATCATAACTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KIKAFRSPNLVTIAFLFLIRRLL*YIITPN Trigger: GTTTGGAGTTATGATGTATCATAACAACCGCCTTAT...CAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTTACTTTCTGGAAATCTaGAAAGCACTGGAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIWQCKEGNKNVREKLQCYFLEI*KALESR Trigger: TCTGGATTCCAGTGCTTTTCAGATTTCCAGAAAGTA...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR TCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAACTCTGTATGCTTGTTTaGTTCTGGGTATTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQLCMLV*FWVFWY Trigger: ATACCAGAATACCCAGAATCAAACAAGCATACAGAG...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR TCA 90 bp | ATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTCTGTATGCTTGTTTaGTTCTGGGTATTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IKIKAFRSPNLVTIAFLFLCMLV*FWVFWY Trigger: ATACCAGAATACCCAGAATCAAACAAGCATACAGAG...GAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | CAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATCTGGGGCTATTGATTTaGTCATATCCAATTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTIIRNMKRAKYLLDHQNLGLLI*SYPIVL Trigger: CAAGACAATTGGATATGAGCAAATCAATAGCCCCAG...ATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAACTGGGGCTATTGATTTaGTCATATCCAATTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQLGLLI*SYPIVL Trigger: CAAGACAATTGGATATGAGCAAATCAATAGCCCCAG...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | ATCATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGCTGTTCTCCTCTGTATaGTTGTTTGATTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IIKIKAFRSPNLVTIAFLLFSSV*LFDSGY Trigger: ATACCCAGAATCAAACAAGCATACAGAGGAGAACAG...CAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | AAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGGCAAGAAGATAGGAAGGAAACTGTTCTCCTCTGTATaGTTGTTTGATTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNVREKLQCKEGKKIGRKLFSSV*LFDSGY Trigger: ATACCCAGAATCAAACAAGCATACAGAGGAGAACAG...TTTCCTTCCTATCTTCTTGCCCTCTTTACACTGCAATTTTTCTCTAACATTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR GCA 90 bp | CAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATAGCTCCTCTACCTTTTaGTGGAACAAATTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTIIRNMKRAKYLLDHQNSSSTF*WNKFLS Trigger: TGAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCT...ATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTGTTCCAATTTTTCCGTaGTTCTCTTCAATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FIWQCKEGNKNVREKLQCVPIFP*FSSILP Trigger: CGGAAGAATTGAAGAGAACCACGGAAAAATTGGAAC...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAAGTTCCAATTTTTCCGTaGTTCTCTTCAATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKVPIFP*FSSILP Trigger: CGGAAGAATTGAAGAGAACCACGGAAAAATTGGAAC...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAAACTCCAAACTGGTTATaGTATTTGCAAGAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKTPNWL*YLQENP Trigger: TGGATTCTCTTGCAAATACCATAACCAGTTTGGAGT...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CCA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACTCAATTTGTACTTTCTaGAAATCTGAAAAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YETGQVSTRSSKLKLSGHSICTF*KSEKHW Trigger: CCAGTGCTTTTCAGATTTCCAGAAAGTACAAATTGA...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR GCA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAATTCTTATATTCAGAATaGCAGTGGTTTTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQFLYSE*QWFFSC Trigger: ACAGGAGAAAAACCACTGGCATTCTGAATATAAGAA...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CCA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATCAATTTGTACTTTCTaGAAATCTGAAAAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNHYQEYETGQVSTRSSKSICTF*KSEKHW Trigger: CCAGTGCTTTTCAGATTTCCAGAAAGTACAAATTGA...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | CCGACTTCTACTGTCCTGGCAATCCTTTCCTTTTCCAGCAGTGGCTaGAGGAGCCGCAGAAGAGTAAGGATTTGCTCTCTTCCAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSTVLAILSFSSSG*RSRRRVRICSLPGF Trigger: GAATCCTGGAAGAGAGCAAATCCTTACTCTTCTGCGGCTCCTGCAGCCACTGCTGGAAAAGGAAAGGATTGCCAGGACAGTAGAAGTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 90 bp | TGTTCCGACTTCTACTGTCCTGGCAATCCTTTCCTTTTCCAGCAGTaGCTGCAGGAGCCGCAGAAGAGTAAGGATTTGCTCTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSDFYCPGNPFLFQQ*LQEPQKSKDLLSSR Trigger: CCTGGAAGAGAGCAAATCCTTACTCTTCTGCGGCTCCTGCAGCCACTGCTGGAAAAGGAAAGGATTGCCAGGACAGTAGAAGTCGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 90 bp | AAAGCCCTTTCTAGGTCATCTCCCTCTGGGTTCCGGAAGGAGACCTaGGCCTTCTGCAATACTTCCAGGTGTGACTCTGTCTCTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KALSRSSPSGFRKET*AFCNTSRCDSVSFS Trigger: ACTGAAAGAGACAGAGTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAACCCAGAGGGAGATGACCTAGAAAGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087401.12 |
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| CDS GCA 90 bp | TGGGACCCTGGACAAAGTGCTGGGGCTTCCCTGTTCTCCTCTGTATaGTTGTTTGATTCTGGGTATTCTGGTATGAGATGTGGTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WDPGQSAGASLFSSV*LFDSGYSGMRCGGV Trigger: TACACCACCACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGGAGAACAGGGAAGCCCCAGCACTTTGTCCAGGGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | TCTAGGTCATCTCCCTCTGGGTTCCGGAAGGAGACCTGGGCCTTCTaGAATACTTCCAGGTGTGACTCTGTCTCTTTCAGTTTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSPSGFRKETWAF*NTSRCDSVSFSFSF Trigger: AAAAGAGAAACTGAAAGAGACAGAGTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAACCCAGAGGGAGATGACCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS CCA 90 bp | ATTAACCTTTCTAGGTCATCTCCCTCTGGGTTCCGGAAGGAGACCTaGGCCTTCTGCAATACTTCCAGGTGTGACTCTGTCTCTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: INLSRSSPSGFRKET*AFCNTSRCDSVSFS Trigger: ACTGAAAGAGACAGAGTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAACCCAGAGGGAGATGACCTAGAAAGGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
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| CDS-3UTR CAA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGCTGAAGACCTGGTACTaGTCACTTTCCATCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QDKGGHSVHRHKGEKKATLKTWY*SLSIGF Trigger: GAAGCCGATGGAAAGTGACAAGTACCAGGTCTTCAG...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 90 bp | TGGACAAAGTGCTGGGGCTTCCCTGTTCTCCTCTGTATGCTTGTTTaGTTCTGGGTATTCTGGTATGAGATGTGGTGGTGTACTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WTKCWGFPVLLCMLV*FWVFWYEMWWCTSL Trigger: GAGAGAAGTACACCACCACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGGAGAACAGGGAAGCCCCAGCACTTTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | TCACTTTCCATCGGCTTCTGCTTCTTCTCAGCAGCCTCGACTTGTTaGTTAGCCTTGCTCCGGTGTAAGTCTTCATCAATACGTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSIGFCFFSAASTC*LALLRCKSSSIRSC Trigger: ACAAGAACGTATTGATGAAGACTTACACCGGAGCAAGGCTAAGCAACAAGTCGAGGCTGCTGAGAAGAAGCAGAAGCCGATGGAAAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | ACTGCATTTATCAGGGCTGTTTTCTCCTTCTGGGTAGGCGGTAGCTaGTTCTACCCTCCTGTAAAAACCGGACATGGAGTAATCTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TAFIRAVFSFWVGGS*FYPPVKTGHGVIYR Trigger: CCTATAGATTACTCCATGTCCGGTTTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGCCCTGATAAATGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | TGCAGGAGCCGCAGAAGAGTAAGGATTTGCTCTCTTCCAGGATTCTaGTCTCTTTCTTTTGCCTACAAATTCCTCCCTGTTAAAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CRSRRRVRICSLPGF*SLSFAYKFLPVKGD Trigger: GTCCCCTTTAACAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTGCGGCTCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 90 bp | TGTACTTCTCTCAGAACTGCATTTATCAGGGCTGTTTTCTCCTTCTaGGTAGGCGGTAGCTGCTTCTACCCTCCTGTAAAAACCGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: CTSLRTAFIRAVFSF*VGGSCFYPPVKTGH Trigger: ATGTCCGGTTTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGCCCTGATAAATGCAGTTCTGAGAGAAGTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | GAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCCGCATGGAACCCGACTaGAAACCATTACCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: ETRQGRTFSTQAQGRKESRMEPD*KPLPKT Trigger: GGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGCG...GCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CAA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCACGCATGGAACCCGACTaGAAACCATTACCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LHTHHKCEAHRLRARTHSRMEPD*KPLPKT Trigger: GGTCTTTGGTAATGGTTTCAAGTCGGGTTCCATGCG...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CAA 90 bp | AAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATAAGCAGCCTCGACTTGTaGCTTAGCCTTGCTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KPLYSIFHVMWIPLIHTISSLDL*LSLAPV Trigger: CACCGGAGCAAGGCTAAGCAACAAGTCGAGGCTGCT...TATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGCTGAAGACCTGGTACTaGTCACTTTCCATCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKLKTWY*SLSIGF Trigger: GAAGCCGATGGAAAGTGACAAGTACCAGGTCTTCAG...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCCTGAAGACCTGGTACTaGTCACTTTCCATCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSCSLLKASFRSHLWCTALKTWY*SLSIGF Trigger: GAAGCCGATGGAAAGTGACAAGTACCAGGTCTTCAG...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 90 bp | TCTACAGGCTCCTCGCCTAGAATCAATTTGTACTTTCTGGAAATCTaGAAAGCACTGGAATCCAGAGACTTAAGCCGAGGGGGTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: STGSSPRINLYFLEI*KALESRDLSRGGDL Trigger: CAGATCACCCCCTCGGCTTAAGTCTCTGGATTCCAGTGCTTTTCAGATTTCCAGAAAGTACAAATTGATTCTAGGCGAGGAGCCTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | GGAATTCAGCTTGGCGATAACCCATGTGCTTCTTGCTCCAGTATATaGCTTCTGTCTCCTGGGTACTATAGGTCACCAATTCATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GIQLGDNPCASCSSI*LLSPGYYRSPIHVE Trigger: CTCAACATGAATTGGTGACCTATAGTACCCAGGAGACAGAAGGCATATACTGGAGCAAGAAGCACATGGGTTATCGCCAAGCTGAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | CTTTCAGAATCTGGAATTCAGCTTGGCGATAACCCATGTGCTTCTTaGTCCAGTATATGCCTTCTGTCTCCTGGGTACTATAGGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSESGIQLGDNPCAS*SSICLLSPGYYRSP Trigger: TGGTGACCTATAGTACCCAGGAGACAGAAGGCATATACTGGAGCAAGAAGCACATGGGTTATCGCCAAGCTGAATTCCAGATTCTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TATATAGCCTGGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGAATCTGCAACTCCCTTaGCAACACCGACAACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: YIAWCSVQYVICFQHCVQNLQLP*QHRQQL Trigger: TAGCTGTTGTCGGTGTTGCAAAGGGAGTTGCAGATT...CTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | CAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGCAGAAGAGTAAGGATTaGCTCTCTTCCAGGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDKGGHSVHRHKGEKKATQKSKD*LSSRIL Trigger: CAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTG...CGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | TATATAGCCTGGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTACAGTCTTGCTTCTCCTCTTaGGTTCTTTCTAGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YIAWCSVQYVICFQHCVQSCFSS*VLSSSA Trigger: AGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAGA...CTGTACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
||
| CDS TCA 90 bp | CCCTGTTCTCCTCTGTATGCTTGTTTGATTCTGGGTATTCTGGTATaGGATGTGGTGGTGTACTTCTCTCAGAACTGCATTTATCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSPLYACLILGILV*DVVVYFSQNCIYQG Trigger: GCCCTGATAAATGCAGTTCTGAGAGAAGTACACCACCACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGGAGAACAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCACTATGTAGAAAGAAGTCTGAAAGCACCACGCCATCAAACACTGGGAAGAGTATTCCCATTCTaGGTGAAGACAAGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CLHYVERSLKAPRHQTLGRVFPF*VKTRAS Trigger: GGATGCTCTTGTCTTCACCAAGAATGGGAATACTCT...TCCCAGTGTTTGATGGCGTGGTGCTTTCAGACTTCTTTCTACATAGTGGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033811.14 |
||
| CDS-3UTR CAA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCATCTGCTCTCTTTCTTTaGCCTACAAATTCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTHHKCEAHRLRARTHSSALFL*PTNSSL Trigger: CAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAGA...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCCAGAAGAGTAAGGATTaGCTCTCTTCCAGGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETRQGRTFSTQAQGRKESQKSKD*LSSRIL Trigger: CAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTG...GCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGACAGCTCCTCTACCTTTaGCTGGAACAAATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTREDIQYTGTREKRKLRQLLYL*LEQIPF Trigger: GAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCTG...TCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAAACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGCAGCTCCTCTACCTTTaGCTGGAACAAATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEKQDKGGHSVHRHKGEKQLLYL*LEQIPF Trigger: GAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCTG...CTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTTTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS CCA 90 bp | ACGTTCCAATTTTTCCGTGGTTCTCTTCAATTCTTCCGACTCTTTTaGGGTCTTTATCTTTGGCATGTTCCGACTTCTACTGTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFQFFRGSLQFFRLF*GLYLWHVPTSTVLA Trigger: TGCCAGGACAGTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAGAGAACCACGGAAAAATTGGAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGAGGATATCAGACTTTCCATCTTaGTTTCTCCGGATATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRTFSTQAQGRKESYERISDFPS*FLRIFQ Trigger: TTGGAATATCCGGAGAAACAAAGATGGAAAGTCTGA...TATCCTCTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
||
| CDS-3UTR CAA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACATATCATATTCTACATaGGCCAGGCTCTTAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDISYST*ARLLAI Trigger: GATTGCTAAGAGCCTGGCCAATGTAGAATATGATAT...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGGACGCAGGTTTTAGGAAATaGCACTCAATGACTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: ARTLAGLKSLLIPPSTLDAGFRK*HSMTPI Trigger: AATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGC...GTCCAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGCAGGTTTTAGGAAATaGCACTCAATGACTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RQGRTFSTQAQGRKESYEAGFRK*HSMTPI Trigger: AATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGC...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACGAGGGTATACTCAAAGTCTaGTTTGTTGTAGGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQGRTFSTQAQGRKESYEGILKV*FVVGRF Trigger: AAACCTGCCTACAACAAACAAGACTTTGAGTATACC...CTCGTAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | TTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAGCAGCCTCGACTTGTaGCTTAGCCTTGCTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFGNVRRATRMLEKNCSVSSLDL*LSLAPV Trigger: CACCGGAGCAAGGCTAAGCAACAAGTCGAGGCTGCT...TACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAAAGCAGCCTCGACTTGTaGCTTAGCCTTGCTCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TNHYQEYETGQVSTRSSKSSLDL*LSLAPV Trigger: CACCGGAGCAAGGCTAAGCAACAAGTCGAGGCTGCT...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AGGATATATAGCCTGGTGCTCAGTCCAGTATGTGATTTGCTTCCAGCACTGTGTGCTGGGGCTATTGATTaGCTCATATCCAATTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIYSLVLSPVCDLLPALCAGAID*LISNCL Trigger: AAGACAATTGGATATGAGCAAATCAATAGCCCCAGC...ACACAGTGCTGGAAGCAAATCACATACTGGACTGAGCACCAGGCTATATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | ATTGCTAGAACCTTGGCAGGGCTGAAATCATTACTTATCCCACCAAGCACATTGTCTGCTCTCTTTCTTTaGCCTACAAATTCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IARTLAGLKSLLIPPSTLSALFL*PTNSSL Trigger: CAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAGA...CAATGTGCTTGGTGGGATAAGTAATGATTTCAGCCCTGCCAAGGTTCTAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTACAGAAGAGTAAGGATTaGCTCTCTTCCAGGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NKTREDIQYTGTREKRKLQKSKD*LSSRIL Trigger: CAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTG...TAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 90 bp | ACTTCCAGGTGTGACTCTGTCTCTTTCAGTTTCTCTTTTAGTTCTTaGTTCTCCTCTTTGGTTCTTTCTAGCTCGGCTTTCAGAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRCDSVSFSFSFSS*FSSLVLSSSAFRIW Trigger: CCAGATTCTGAAAGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAGAACTAAAAGAGAAACTGAAAGAGACAGAGTCACACCTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | CCGTCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCATATCATATTCTACATaGGCCAGGCTCTTAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PSCSLLKASFRSHLWCTAISYST*ARLLAI Trigger: GATTGCTAAGAGCCTGGCCAATGTAGAATATGATAT...GGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGACGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCAGGTATACTCAAAGTCTaGTTTGTTGTAGGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHTHHKCEAHRLRARTHSGILKV*FVVGRF Trigger: AAACCTGCCTACAACAAACAAGACTTTGAGTATACC...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | CTTCACACCCACCATAAATGTGAAGCACACCGATTAAGAGCCAGGACTCATTCATTCATCAATACGTTCTaGTTCTTCTGGAACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHTHHKCEAHRLRARTHSFINTF*FFWNRA Trigger: TGCTCTGTTCCAGAAGAACAAGAACGTATTGATGAA...TGAATGAGTCCTGGCTCTTAATCGGTGTGCTTCACATTTATGGTGGGTGTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TCAACCATAATCCTACCACCTAAGCACCAACCATCATTAAGAGTGCCGTCATGTGCTGGGGCTATTGATTaGCTCATATCCAATTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: STIILPPKHQPSLRVPSCAGAID*LISNCL Trigger: AAGACAATTGGATATGAGCAAATCAATAGCCCCAGC...ACATGACGGCACTCTTAATGATGGTTGGTGCTTAGGTGGTAGGATTATGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | TTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCAAATCTGCAACTCCCTTaGCAACACCGACAACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNHSTLSSMSCGYHSYTPNLQLP*QHRQQL Trigger: TAGCTGTTGTCGGTGTTGCAAAGGGAGTTGCAGATT...TGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGTCTTGCTTCTCCTCTTaGGTTCTTTCTAGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GNVRRATRMLEKNCSVKRSCFSS*VLSSSA Trigger: AGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAGA...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 90 bp | CTCAGAGGTAACACCACCAATCTCTTTTTCTTCAGCATCGAAGTCTaGTACCAGGATATCATATTGATCTGTATCGAAGTCCAGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGNTTNLFFFSIEV*YQDIILICIEVQLR Trigger: TCTGAGCTGGACTTCGATACAGATCAATATGATATCCTGGTATCAGACTTCGATGCTGAAGAAAAAGAGATTGGTGGTGTTACCTCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 90 bp | CAAAGTCTTGTTTGTTGTAGGCAGGTTTTAGGAAATTGCACTCAATaGCTCCAATTACTCCCACACCTTCTCCACAGGTTGGCTTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: QSLVCCRQVLGNCTQ*LQLLPHLLHRLALT Trigger: AGTTAAAGCCAACCTGTGGAGAAGGTGTGGGAGTAATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGCCTACAACAAACAAGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS GCA 90 bp | CTGCTTTCTTCTCTAACAGACGGAAGCAGGCTGGGGCTATTGATTTaGTCATATCCAATTGTCTTGTCATTTAGTTCAGCCATATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSLTDGSRLGLLI*SYPIVLSFSSAISC Trigger: ACAAGATATGGCTGAACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCTGCTTCCGTCTGTTAGAGAAGAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 90 bp | ACTCTGTCTCTTTCAGTTTCTCTTTTAGTTCTTGCTTCTCCTCTTTaGTTCTTTCTAGCTCGGCTTTCAGAATCTGGAATTCAGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLSVSLLVLASPL*FFLARLSESGIQLG Trigger: GCCAAGCTGAATTCCAGATTCTGAAAGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAGAACTAAAAGAGAAACTGAAAGAGACAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | AAAGCTGTTGAATGGGCCTCTTTCTTCACACCCACCATAAATGTGAAGCACACCAAACACGGTTTCTTCTaGACTTCCTCAACATCTATA | + |
|
Preference number: 5 (lower is better) Translates to: KAVEWASFFTPTINVKHTKHGFF*TSSTSI Trigger: TATAGATGTTGAGGAAGTCAAGAAGAAACCGTGTTT...GGTGTGCTTCACATTTATGGTGGGTGTGAAGAAAGAGGCCCATTCAACAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CAA 90 bp | AACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTAATATCATATTCTACATaGGCCAGGCTCTTAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: NKTREDIQYTGTREKRKLISYST*ARLLAI Trigger: GATTGCTAAGAGCCTGGCCAATGTAGAATATGATAT...TAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TCATGTTCACTCTTGAAAGCTTCATTTAGGTCCCACTTATGGTGTACTGCCTTCTTGCAAGGGCATTTATaGTCAACCGGTATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSLLKASFRSHLWCTAFLQGHL*STGILW Trigger: CCAAAGAATACCGGTTGACAATAAATGCCCTTGCAA...GAAGGCAGTACACCATAAGTGGGACCTAAATGAAGCTTTCAAGAGTGAACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGCAGCTCCTCTACCTTTaGCTGGAACAAATTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GNVRRATRMLEKNCSVKRQLLYL*LEQIPF Trigger: GAAAGGAATTTGTTCCAGCAAAAGGTAGAGGAGCTG...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | TTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCAAATCTGGAATTCAGCTaGGCGATAACCCATGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LNHSTLSSMSCGYHSYTPNLEFS*AITHVL Trigger: AAGCACATGGGTTATCGCCAAGCTGAATTCCAGATT...TGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATAAGTCCAGTATGTGATTaGCTTCCAGCACTGTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: KPLYSIFHVMWIPLIHTISPVCD*LPALCT Trigger: TGTACACAGTGCTGGAAGCAAATCACATACTGGACT...TATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087401.12 |
||
| CDS-3UTR CAA 90 bp | TGCCTTCCTTTAAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCAGTCAACCGGTATTCTTaGGTATACTCAAAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLPLNHSTLSSMSCGYHSVNRYS*VYSKSC Trigger: ACAAGACTTTGAGTATACCAAAGAATACCGGTTGAC...TGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTTAAAGGAAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGAACTCTTTGCAAGGGCATTTATaGTCAACCGGTATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KAFRSPNLVTIAFLFLNSLQGHL*STGILW Trigger: CCAAAGAATACCGGTTGACAATAAATGCCCTTGCAA...AGAGTTCAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGACAAGGGAGGACATTCAGTACACAGGCACAAGGGAGAAAAGAAAGCTAAATAACAAAACCATCTaGCAGGTAATGTGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKTREDIQYTGTREKRKLNNKTI*QVMWMD Trigger: ATCCATCCACATTACCTGCAAGATGGTTTTGTTATT...TAGCTTTCTTTTCTCCCTTGTGCCTGTGTACTGAATGTCCTCCCTTGTCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGAATCTGCAACTCCCTTaGCAACACCGACAACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KIKAFRSPNLVTIAFLFLNLQLP*QHRQQL Trigger: TAGCTGTTGTCGGTGTTGCAAAGGGAGTTGCAGATT...CAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGTCTTGCTTCTCCTCTTaGGTTCTTTCTAGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KIKAFRSPNLVTIAFLFLSCFSS*VLSSSA Trigger: AGCCGAGCTAGAAAGAACCAAAGAGGAGAAGCAAGA...CAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS TCA 90 bp | AACTGGCAGCCTGCTTTCTCAAAGGCCTTAATAAGGCGGTTGTTATaGTACATCATAACTCCAAACTGGTTATGGTATTTGCAAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NWQPAFSKALIRRLL*YIITPNWLWYLQEN Trigger: ATTCTCTTGCAAATACCATAACCAGTTTGGAGTTATGATGTATCATAACAACCGCCTTATTAAGGCCTTTGAGAAAGCAGGCTGCCAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
||
| CDS-3UTR CAA 90 bp | AAACCACTCTACTCTATCTTCCATGTCATGTGGATACCACTCATACACACCATAGTCAACCGGTATTCTTaGGTATACTCAAAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPLYSIFHVMWIPLIHTIVNRYS*VYSKSC Trigger: ACAAGACTTTGAGTATACCAAAGAATACCGGTTGAC...TATGGTGTGTATGAGTGGTATCCACATGACATGGAAGATAGAGTAGAGTGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | GGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAAAGAGGTTCATCAATACGTTCTaGTTCTTCTGGAACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNVRRATRMLEKNCSVKRFINTF*FFWNRA Trigger: TGCTCTGTTCCAGAAGAACAAGAACGTATTGATGAA...CCTCTTTACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | AAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCCTGTTGCAAGGGCATTTATaGTCAACCGGTATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KIKAFRSPNLVTIAFLFLLQGHL*STGILW Trigger: CCAAAGAATACCGGTTGACAATAAATGCCCTTGCAA...CAGGAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAATCTGCTCTCTTTCTTTaGCCTACAAATTCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQSALFL*PTNSSL Trigger: CAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAGA...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | ATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCAATCTGGAATTCAGCTaGGCGATAACCCATGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IKIKAFRSPNLVTIAFLFNLEFS*AITHVL Trigger: AAGCACATGGGTTATCGCCAAGCTGAATTCCAGATT...GAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAATCTGGAATTCAGCTaGGCGATAACCCATGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIWQCKEGNKNVREKLQCNLEFS*AITHVL Trigger: AAGCACATGGGTTATCGCCAAGCTGAATTCCAGATT...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | ATACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAGCTGGGGCTATTGATTaGCTCATATCCAATTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQTIIRNMKRAKYLLDHQAGAID*LISNCL Trigger: AAGACAATTGGATATGAGCAAATCAATAGCCCCAGC...TTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTAAAGCTTTCAGGTCACAAACACGGTTTCTTCTaGACTTCCTCAACATCTATA | + |
|
Preference number: 5 (lower is better) Translates to: YETGQVSTRSSKLKLSGHKHGFF*TSSTSI Trigger: TATAGATGTTGAGGAAGTCAAGAAGAAACCGTGTTT...GTGACCTGAAAGCTTTAATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CAA 90 bp | CAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAATTCAGACTTTCCATCTTaGTTTCTCCGGATATTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QTIIRNMKRAKYLLDHQNSDFPS*FLRIFQ Trigger: TTGGAATATCCGGAGAAACAAAGATGGAAAGTCTGA...ATTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS-3UTR CAA 90 bp | ACAAACCATTATCAGGAATATGAAACGGGCCAAGTATCTACTAGATCATCAAAAGCAGGTTTTAGGAAATaGCACTCAATGACTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TNHYQEYETGQVSTRSSKAGFRK*HSMTPI Trigger: AATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGC...TTTTGATGATCTAGTAGATACTTGGCCCGTTTCATATTCCTGATAATGGTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | ATCATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGGGTATACTCAAAGTCTaGTTTGTTGTAGGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IIKIKAFRSPNLVTIAFLGILKV*FVVGRF Trigger: AAACCTGCCTACAACAAACAAGACTTTGAGTATACC...CAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
||
| CDS-3UTR CAA 90 bp | ATCAAAATTAAAGCTTTCAGGTCACCTAACTTGGTGACTATTGCTTTTCTGTTCAATAACAAAACCATCTaGCAGGTAATGTGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IKIKAFRSPNLVTIAFLFNNKTI*QVMWMD Trigger: ATCCATCCACATTACCTGCAAGATGGTTTTGTTATT...GAACAGAAAAGCAATAGTCACCAAGTTAGGTGACCTGAAAGCTTTAATTTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTGGCAATGTAAGGAGGGCAACAAGAATGTTAGAGAAAAATTGCAGTGTAATAACAAAACCATCTaGCAGGTAATGTGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FIWQCKEGNKNVREKLQCNNKTI*QVMWMD Trigger: ATCCATCCACATTACCTGCAAGATGGTTTTGTTATT...ACACTGCAATTTTTCTCTAACATTCTTGTTGCCCTCCTTACATTGCCAAATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 72 bp | CGGGGGCTCATCGTGCTCAGGCGGATCCTGAAGGCCTaGGGGACGCTGCCCGCCCGGGCCAGTCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLIVLRRILKA*GTLPARASPPP Trigger: GGGAGGCGGACTGGCCCGGGCGGGCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCACGATGAGCCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS TCA 72 bp | GGAGGTAGCGGGGGCTCATCGTGCTCAGGCGGATCCTaGAGGCCTGCGGGACGCTGCCCGCCCGGGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSGGSSCSGGS*RPAGRCPPGPV Trigger: GACTGGCCCGGGCGGGCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCACGATGAGCCCCCGCTACCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS GCA 72 bp | TACAGCATTATCGTGCTCAGGCGGATCCTGAAGGCCTaGGGGACGCTGCCCGCCCGGGCCAGTCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: YSIIVLRRILKA*GTLPARASPPP Trigger: GGGAGGCGGACTGGCCCGGGCGGGCAGCGTCCCGCAGGCCTTCAGGATCCGCCTGAGCACGATAATGCTGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171896.2 |
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| CDS TCA 72 bp | GATCTACAGCATTATCTAGCAGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGCTGGAGTTGCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLQHYLAAPRWH*RVACGCWSCSG Trigger: TCCAGAGCAACTCCAGCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGCTGCTAGATAATGCTGTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000165274.2 |
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| CDS GCA 72 bp | GAACCCCTGATCTTGGTCCTGGGACCCTGGACAAAGTaGTGGGGCTTCCCTGTTCTCCTCTGTATGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPLILVLGPWTK*WGFPVLLCMLV Trigger: AACAAGCATACAGAGGAGAACAGGGAAGCCCCAGCACTTTGTCCAGGGTCCCAGGACCAAGATCAGGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | TCTAGGTCATCTCCCTCTGGGTTCCGGAAGGAGACCTaGGCCTTCTGCAATACTTCCAGGTGTGACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSPSGFRKET*AFCNTSRCDSV Trigger: GACAGAGTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAACCCAGAGGGAGATGACCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS GCA 72 bp | TCTCCCTCTGGGTTCCGGAAGGAGACCTGGGCCTTCTaGAATACTTCCAGGTGTGACTCTGTCTCTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSGFRKETWAF*NTSRCDSVSFS Trigger: ACTGAAAGAGACAGAGTCACACCTGGAAGTATTGCAGAAGGCCCAGGTCTCCTTCCGGAACCCAGAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 |
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| CDS GCA 72 bp | ATCAGGGCTGTTTTCTCCTTCTGGGTAGGCGGTAGCTaGTTCTACCCTCCTGTAAAAACCGGACATGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IRAVFSFWVGGS*FYPPVKTGHGV Trigger: TACTCCATGTCCGGTTTTTACAGGAGGGTAGAAGCAGCTACCGCCTACCCAGAAGGAGAAAACAGCCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 72 bp | AGCAGTGGCTGCAGGAGCCGCAGAAGAGTAAGGATTTaGTCTCTTCCAGGATTCTGCTCTCTTTCTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCRSRRRVRI*SLPGFCSLSFA Trigger: GGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTGCGGCTCCTGCAGCCACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | CTAACTGGATGGGAGCGCCTGAATCTGCAACTCCCTTaGCAACACCGACAACAGCTACAAACGGCCCTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LTGWERLNLQLP*QHRQQLQTALY Trigger: ATAAAGGGCCGTTTGTAGCTGTTGTCGGTGTTGCAAAGGGAGTTGCAGATTCAGGCGCTCCCATCCAGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | CAGCAGTGGCTGCAGGAGCCGCAGAAGAGTAAGGATTaGCTCTCTTCCAGGATTCTGCTCTCTTTCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QQWLQEPQKSKD*LSSRILLSFFC Trigger: GCAAAAGAAAGAGAGCAGAATCCTGGAAGAGAGCAAATCCTTACTCTTCTGCGGCTCCTGCAGCCACTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 72 bp | AAAAGCACTGGAATCCAGAGACTTAAGCCGAGGGGGTaGTCTGCTTTCTTCTCTAACAGACGGAAGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KSTGIQRLKPRG*SAFFSNRRKQA Trigger: AGCCTGCTTCCGTCTGTTAGAGAAGAAAGCAGATCACCCCCTCGGCTTAAGTCTCTGGATTCCAGTGCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | ATTACTCCCACACCTTCTCCACAGGTTGGCTTTAACTaGCAGCCTGCTTTCTCAAAGGCCTTAATAAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ITPTPSPQVGFN*QPAFSKALIRR Trigger: CCGCCTTATTAAGGCCTTTGAGAAAGCAGGCTGCCAGTTAAAGCCAACCTGTGGAGAAGGTGTGGGAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS TCA 72 bp | TGCTGGGGCTTCCCTGTTCTCCTCTGTATGCTTGTTTaGTTCTGGGTATTCTGGTATGAGATGTGGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CWGFPVLLCMLV*FWVFWYEMWWC Trigger: ACACCACCACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGGAGAACAGGGAAGCCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS GCA 72 bp | ATCGGCTTCTGCTTCTTCTCAGCAGCCTCGACTTGTTaGTTAGCCTTGCTCCGGTGTAAGTCTTCATCAATA | + |
|
Preference number: 6 (lower is better) Translates to: IGFCFFSAASTC*LALLRCKSSSI Trigger: TATTGATGAAGACTTACACCGGAGCAAGGCTAAGCAACAAGTCGAGGCTGCTGAGAAGAAGCAGAAGCCGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | GGGGATTATAATAACAAAACCATCTTGCAGGTAATGTaGATGGATCCACCATCCCGGGAAGCCTCCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GDYNNKTILQVM*MDPPSREASST Trigger: AGTGGAGGAGGCTTCCCGGGATGGTGGATCCATCCACATTACCTGCAAGATGGTTTTGTTATTATAATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS GCA 72 bp | GGACAAAGTGCTGGGGCTTCCCTGTTCTCCTCTGTATaGTTGTTTGATTCTGGGTATTCTGGTATGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GQSAGASLFSSV*LFDSGYSGMRC Trigger: ACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGGAGAACAGGGAAGCCCCAGCACTTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 90 bp | CACGTTCCAATTTTTCCGTGGTTCTCTTCAATTCTTCCGACTCTTTaGGGGTCTTTATCTTTGGCATGTTCCGACTTCTACTGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HVPIFPWFSSILPTL*GSLSLACSDFYCPG Trigger: GCCAGGACAGTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAGAGAACCACGGAAAAATTGGAACGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 90 bp | GACGGAAGCAGGCTGGGGCTATTGATTTGCTCATATCCAATTGTCTaGTCATTTAGTTCAGCCATATCTTGTAGAGGAGGAGTCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DGSRLGLLICSYPIV*SFSSAISCRGGVFG Trigger: ACCAAAGACTCCTCCTCTACAAGATATGGCTGAACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCTGCTTCCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 72 bp | GTTTGTTGTAGGCAGGTTTTAGGAAATTGCACTCAATaGCTCCAATTACTCCCACACCTTCTCCACAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCCRQVLGNCTQ*LQLLPHLLHRL Trigger: CAACCTGTGGAGAAGGTGTGGGAGTAATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGCCTACAACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS GCA 72 bp | TCTCTAACAGACGGAAGCAGGCTGGGGCTATTGATTTaGTCATATCCAATTGTCTTGTCATTTAGTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLTDGSRLGLLI*SYPIVLSFSSA Trigger: GGCTGAACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCTGCTTCCGTCTGTTAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | CTTCAATTCTTCCGACTCTTTTGGGGTCTTTATCTTTaGCATGTTCCGACTTCTACTGTCCTGGCAATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQFFRLFWGLYL*HVPTSTVLAIL Trigger: AAGGATTGCCAGGACAGTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | CAGGCTCTTAGCAATCATCTGCGTAGTCACCTTCTTTaGTCGCAGAAAAATCTTCATCCGGGGCTTCATATA | + |
|
Preference number: 6 (lower is better) Translates to: QALSNHLRSHLL*SQKNLHPGLHI Trigger: TATATGAAGCCCCGGATGAAGATTTTTCTGCGACAAAAGAAGGTGACTACGCAGATGATTGCTAAGAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | GGATTTGCTCTCTTCCAGGATTCTGCTCTCTTTCTTTaGCCTACAAATTCCTCCCTGTTAAAGGGGACTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GFALFQDSALFL*PTNSSLLKGTN Trigger: GTTAGTCCCCTTTAACAGGGAGGAATTTGTAGGCAAAAGAAAGAGAGCAGAATCCTGGAAGAGAGCAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | TCTTCAATTCTTCCGACTCTTTTGGGGTCTTTATCTTaGGCATGTTCCGACTTCTACTGTCCTGGCAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSILPTLLGSLS*ACSDFYCPGNP Trigger: AGGATTGCCAGGACAGTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 90 bp | GGTGATCTGCTTTCTTCTCTAACAGACGGAAGCAGGCTGGGGCTATaGATTTGCTCATATCCAATTGTCTTGTCATTTAGTTCAGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GDLLSSLTDGSRLGL*ICSYPIVLSFSSAI Trigger: TATGGCTGAACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCTGCTTCCGTCTGTTAGAGAAGAAAGCAGATCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 72 bp | CCTCTGTATGCTTGTTTGATTCTGGGTATTCTGGTATaGGATGTGGTGGTGTACTTCTCTCAGAACTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PLYACLILGILV*DVVVYFSQNCI Trigger: AATGCAGTTCTGAGAGAAGTACACCACCACATCTCATACCAGAATACCCAGAATCAAACAAGCATACAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | TTCGTGGAGGTAGGCTTATATATATCATATTCTACATaGGCCAGGCTCTTAGCAATCATCTGCGTAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: FVEVGLYISYST*ARLLAIICVVT Trigger: GGTGACTACGCAGATGATTGCTAAGAGCCTGGCCAATGTAGAATATGATATATATAAGCCTACCTCCACGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | TTTTTCCGTGGTTCTCTTCAATTCTTCCGACTCTTTTaGGGTCTTTATCTTTGGCATGTTCCGACTTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: FFRGSLQFFRLF*GLYLWHVPTST Trigger: AGTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAGAGAACCACGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | AGGCTGGGGCTATTGATTTGCTCATATCCAATTGTCTaGTCATTTAGTTCAGCCATATCTTGTAGAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLGLLICSYPIV*SFSSAISCRGG Trigger: TCCTCCTCTACAAGATATGGCTGAACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | CTTTCTTCTCTAACAGACGGAAGCAGGCTGGGGCTATaGATTTGCTCATATCCAATTGTCTTGTCATTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLTDGSRLGL*ICSYPIVLSFS Trigger: ACTAAATGACAAGACAATTGGATATGAGCAAATCAATAGCCCCAGCCTGCTTCCGTCTGTTAGAGAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 72 bp | ATTTTTCCGTGGTTCTCTTCAATTCTTCCGACTCTTTaGGGGTCTTTATCTTTGGCATGTTCCGACTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: IFPWFSSILPTL*GSLSLACSDFY Trigger: GTAGAAGTCGGAACATGCCAAAGATAAAGACCCCAAAAGAGTCGGAAGAATTGAAGAGAACCACGGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 90 bp | ACCTGCTTATTCGTGGAGGTAGGCTTATATATATCATATTCTACATaGGCCAGGCTCTTAGCAATCATCTGCGTAGTCACCTTCTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TCLFVEVGLYISYST*ARLLAIICVVTFFC Trigger: ACAAAAGAAGGTGACTACGCAGATGATTGCTAAGAGCCTGGCCAATGTAGAATATGATATATATAAGCCTACCTCCACGAATAAGCAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CAA 90 bp | TTTGCAACACCGACAACAGCTACAAACGGCCCTTTATTCATGTCTTaGTCTATGTTCTCACTACTTCTGTTAGACTCTTCTGCTACCAAT | + |
|
Preference number: 6 (lower is better) Translates to: FATPTTATNGPLFMS*SMFSLLLLDSSATN Trigger: ATTGGTAGCAGAAGAGTCTAACAGAAGTAGTGAGAACATAGACAAAGACATGAATAAAGGGCCGTTTGTAGCTGTTGTCGGTGTTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS CCA 72 bp | TCCTTGCAAGGGCATTTATTGTCAACCGGTATTCTTTaGTATACTCAAAGTCTTGTTTGTTGTAGGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLQGHLLSTGIL*YTQSLVCCRQV Trigger: AACCTGCCTACAACAAACAAGACTTTGAGTATACCAAAGAATACCGGTTGACAATAAATGCCCTTGCAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS TCA 72 bp | AACACCACCAATCTCTTTTTCTTCAGCATCGAAGTCTaGTACCAGGATATCATATTGATCTGTATCGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NTTNLFFFSIEV*YQDIILICIEV Trigger: GACTTCGATACAGATCAATATGATATCCTGGTATCAGACTTCGATGCTGAAGAAAAAGAGATTGGTGGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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| CDS TCA 72 bp | CCTGCTTTCTCAAAGGCCTTAATAAGGCGGTTGTTATaGTACATCATAACTCCAAACTGGTTATGGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: PAFSKALIRRLL*YIITPNWLWYL Trigger: CAAATACCATAACCAGTTTGGAGTTATGATGTATCATAACAACCGCCTTATTAAGGCCTTTGAGAAAGCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 ENSMUST00000167664.2 |
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| CDS GCA 72 bp | TGGTATTTGCAAGAGAATCCAAACGTGATTCTCACCTaGTTATTCGTGGAGGTAGGCTTATATATATCATAT | + |
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Preference number: 6 (lower is better) Translates to: WYLQENPNVILT*LFVEVGLYISY Trigger: ATATGATATATATAAGCCTACCTCCACGAATAAGCAGGTGAGAATCACGTTTGGATTCTCTTGCAAATACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033811.14 ENSMUST00000087401.12 ENSMUST00000136415.9 |
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