Pregenerated sensors for MORC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039456Ensembl transcript IDs: ENSMUST00000044068.10, ENSMUST00000201097.3, ENSMUST00000201754.4, ENSMUST00000202261.5, ENSMUST00000232639.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCAGCAGTTCACAGGTTATGTCAAGAGTTGTGTGTCCACAGTGCCTaGGACACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAG | + |
Preference number: 1 (lower is better) Translates to: PAVHRLCQELCVHSA*DTRMHRIQKDAALQ Trigger: CTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAACTCTTGACATAACCTGTGAACTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR TCA 90 bp | ACCAAGTTTCCGCTTCATGCTACTGTTCTCAGGTTCAGACGCTGGTaGAGCAAGGTTGAGATTTATAATCCTTGCTGCAAAGGGACTCGT | + |
Preference number: 1 (lower is better) Translates to: TKFPLHATVLRFRRW*SKVEIYNPCCKGTR Trigger: ACGAGTCCCTTTGCAGCAAGGATTATAAATCTCAACCTTGCTTCACCAGCGTCTGAACCTGAGAACAGTAGCATGAAGCGGAAACTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR TCA 90 bp | ATTTTTGGTAAAAACCATTGCATCTTTGCCCAGTCGCATAGAACCTaGCTTGAAGCCATTCCCGTACAATCCAACTGGGACATGACCATT | + |
Preference number: 1 (lower is better) Translates to: IFGKNHCIFAQSHRT*LEAIPVQSNWDMTI Trigger: AATGGTCATGTCCCAGTTGGATTGTACGGGAATGGCTTCAAGTCAGGTTCTATGCGACTGGGCAAAGATGCAATGGTTTTTACCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 90 bp | AGAATTGCTGCTAGGCTTGCTTTTGATTCTGTTAAATTAATCATCTaGCGGTGTTTGTTGAACGTCACGATCGGGACAACAACGTGCTCC | + |
Preference number: 1 (lower is better) Translates to: RIAARLAFDSVKLII*RCLLNVTIGTTTCS Trigger: GGAGCACGTTGTTGTCCCGATCGTGACGTTCAACAAACACCGTCAGATGATTAATTTAACAGAATCAAAAGCAAGCCTAGCAGCAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 90 bp | GGAGGATTACTTAATCTCCGAGTCTTTGCATTCAGAATTGATGAGTaGACACCAAGTTTCCGCTTCATGCTACTGTTCTCAGGTTCAGAC | + |
Preference number: 1 (lower is better) Translates to: GGLLNLRVFAFRIDE*TPSFRFMLLFSGSD Trigger: GTCTGAACCTGAGAACAGTAGCATGAAGCGGAAACTTGGTGTTCACTCATCAATTCTGAATGCAAAGACTCGGAGATTAAGTAATCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR TCA 90 bp | TGTACCCTTTCCTCCCTGCAGTCTCATCTAAATCCTCAGGAATTCTaGTGTCGTATTTATCCTTTTCAAAATCAAATTCTGTTGCATTTT | + |
Preference number: 1 (lower is better) Translates to: CTLSSLQSHLNPQEF*CRIYPFQNQILLHF Trigger: AAAATGCAACAGAATTTGATTTTGAAAAGGATAAATACGACATCAGAATTCCTGAGGATTTAGATGAGACTGCAGGGAGGAAAGGGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR TCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCCGCTCTTCAGTCTGTaGCCTGGCACGCGTTACGTG | + |
Preference number: 2 (lower is better) Translates to: ANSASFGFPLYEQNHVRDPLFSL*PGTRYV Trigger: CACGTAACGCGTGCCAGGTCACAGACTGAAGAGCGG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 90 bp | CTATTACGCTGCTCAACCCCAGCAGTTCACAGGTTATGTCAAGAGTaGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAG | + |
Preference number: 2 (lower is better) Translates to: LLRCSTPAVHRLCQE*CVHSAWDTRMHRIQ Trigger: CTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAACTCTTGACATAACCTGTGAACTGCTGGGGTTGAGCAGCGTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 90 bp | CGCTTCATGCTACTGTTCTCAGGTTCAGACGCTGGTGAAGCAAGGTaGAGATTTATAATCCTTGCTGCAAAGGGACTCGTGACTTCAGAA | + |
Preference number: 2 (lower is better) Translates to: RFMLLFSGSDAGEAR*RFIILAAKGLVTSE Trigger: TTCTGAAGTCACGAGTCCCTTTGCAGCAAGGATTATAAATCTCAACCTTGCTTCACCAGCGTCTGAACCTGAGAACAGTAGCATGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR GCA 90 bp | GAGATTCCAAATGATGATTCTTGTCCCCTTCTTACCCATGATAGCATTGAGTTCATCGGGACAACAACGTaGTCCGCCTTTATGACTTCC | + |
Preference number: 2 (lower is better) Translates to: EIPNDDSCPLLTHDSIEFIGTTT*SAFMTS Trigger: GGAAGTCATAAAGGCGGAGCACGTTGTTGTCCCGAT...GAACTCAATGCTATCATGGGTAAGAAGGGGACAAGAATCATCATTTGGAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR GCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACCTGGGACACTCGAATaGATAGAATACAGAAAGATG | + |
Preference number: 2 (lower is better) Translates to: TTRKSQANSASFGFPLYEPGTLE*IEYRKM Trigger: CATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGG...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR TCA 90 bp | TTAAGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCCAGTCGCATAGAACCTaGCTTGAAGCCATTCCCGTA | + |
Preference number: 2 (lower is better) Translates to: LRKLHSIIPTTPTPMLFAQSHRT*LEAIPV Trigger: TACGGGAATGGCTTCAAGTCAGGTTCTATGCGACTG...GGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CCA 90 bp | ACTTCTGAGATTCCAAATGATGATTCTTGTCCCCTTCTTACCCATGATAGCATTCCCGTACAATCCAACTaGGACATGACCATTCATGGT | + |
Preference number: 2 (lower is better) Translates to: TSEIPNDDSCPLLTHDSIPVQSN*DMTIHG Trigger: ACCATGAATGGTCATGTCCCAGTTGGATTGTACGGG...AATGCTATCATGGGTAAGAAGGGGACAAGAATCATCATTTGGAATCTCAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR CAA 90 bp | TTTCAACTGGAGGATTACTTAATCTCCGAGTCTTTGCATTCAGAATaGATGAGTGAACACCAAGTTTCCGCTTCATGCTACTGTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: FQLEDYLISESLHSE*MSEHQVSASCYCSQ Trigger: CTGAGAACAGTAGCATGAAGCGGAAACTTGGTGTTCACTCATCAATTCTGAATGCAAAGACTCGGAGATTAAGTAATCCTCCAGTTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR TCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCTGAAAAGCTCTTGGTaGAAAACACCAGTCTCTAGG | + |
Preference number: 2 (lower is better) Translates to: LTISNLTTRKSQANSASFLKSSW*KTPVSR Trigger: CCTAGAGACTGGTGTTTTTCACCAAGAGCTTTTCAG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR TCA 90 bp | TTAAGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCAATCCAACTGGGACATaGCCATTCATGGTGACTTTG | + |
Preference number: 2 (lower is better) Translates to: LRKLHSIIPTTPTPMLFANPTGT*PFMVTL Trigger: CAAAGTCACCATGAATGGTCATGTCCCAGTTGGATT...GGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR CAA 90 bp | AGATTCCAAATGATGATTCTTGTCCCCTTCTTACCCATGATAGCATaGAGTTCTGCCAGTAATTTCTGTTCCGTAGAAAACAGAGAATGT | + |
Preference number: 2 (lower is better) Translates to: RFQMMILVPFLPMIA*SSASNFCSVENREC Trigger: ACATTCTCTGTTTTCTACGGAACAGAAATTACTGGCAGAACTCAATGCTATCATGGGTAAGAAGGGGACAAGAATCATCATTTGGAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR GCA 90 bp | AGTAATTTCTGTTCCGTAGAAAACAGAGAATGTTCCAGAATTGCTGCTAGGCTTTTTGGTAAAAACCATTaGATCTTTGCCCAGTCGCAT | + |
Preference number: 2 (lower is better) Translates to: SNFCSVENRECSRIAARLFGKNH*IFAQSH Trigger: ATGCGACTGGGCAAAGATGCAATGGTTTTTACCAAA...AAGCCTAGCAGCAATTCTGGAACATTCTCTGTTTTCTACGGAACAGAAATTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CCA 90 bp | TTAAGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCCTCTCAGGGGCAATTTaGTCCATTCTTTCTTGTTTC | + |
Preference number: 2 (lower is better) Translates to: LRKLHSIIPTTPTPMLFALSGAI*SILSCF Trigger: GAAACAAGAAAGAATGGACCAAATTGCCCCTGAGAG...GGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR CCA 72 bp | CCTTGCTGCAAAGGGACTCGTGACTTCAGAAAGATGTaGTCTTGGAACGCTCTCCTTCACAGGGGAGAAGCT | + |
Preference number: 3 (lower is better) Translates to: PCCKGTRDFRKM*SWNALLHRGEA Trigger: AGCTTCTCCCCTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCTGAAGTCACGAGTCCCTTTGCAGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR GCA 72 bp | AAGAGTTGTGTGTCCACAGTGCCTGGGACACTCGAATaGATAGAATACAGAAAGATGCCGCTCTTCAGTCTG | + |
Preference number: 3 (lower is better) Translates to: KSCVSTVPGTLE*IEYRKMPLFSL Trigger: CAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR CAA 90 bp | GGTTCAGACGCTGGTGAAGCAAGGTTGAGATTTATAATCCTTGCTGCAAAGGGACAGAAAGATGTGGTCTaGGAACGCTCTCCTTCACAG | + |
Preference number: 3 (lower is better) Translates to: GSDAGEARLRFIILAAKGQKDVV*ERSPSQ Trigger: CTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCTG...TCCCTTTGCAGCAAGGATTATAAATCTCAACCTTGCTTCACCAGCGTCTGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACAGGTTATGTCAAGAGTaGTGTGTCCACAGTGCCTGG | + |
Preference number: 3 (lower is better) Translates to: ANSASFGFPLYEQNHVRDRLCQE*CVHSAW Trigger: CCAGGCACTGTGGACACACAACTCTTGACATAACCT...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR TCA 72 bp | GACTTGAAGCCATTCCCGTACAATCCAACTGGGACATaGCCATTCATGGTGACTTTGTCACTGAAGCCAAAG | + |
Preference number: 3 (lower is better) Translates to: DLKPFPYNPTGT*PFMVTLSLKPK Trigger: CTTTGGCTTCAGTGACAAAGTCACCATGAATGGTCATGTCCCAGTTGGATTGTACGGGAATGGCTTCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 72 bp | AAAAACCATTGCATCTTTGCCCAGTCGCATAGAACCTaGCTTGAAGCCATTCCCGTACAATCCAACTGGGAC | + |
Preference number: 3 (lower is better) Translates to: KNHCIFAQSHRT*LEAIPVQSNWD Trigger: GTCCCAGTTGGATTGTACGGGAATGGCTTCAAGTCAGGTTCTATGCGACTGGGCAAAGATGCAATGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CAA 90 bp | ATTTATAATCCTTGCTGCAAAGGGACTCGTGACTTCAGAAAGATGTGGTCTTGGAGGGAGGATTTCCGGTaGTCTGATCCTGAATCTCTC | + |
Preference number: 3 (lower is better) Translates to: IYNPCCKGTRDFRKMWSWREDFR*SDPESL Trigger: GAGAGATTCAGGATCAGACAACCGGAAATCCTCCCT...CCAAGACCACATCTTTCTGAAGTCACGAGTCCCTTTGCAGCAAGGATTATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCAACCTGAAAAGCTCTaGGTGAAAAACACCAGTCTC | + |
Preference number: 3 (lower is better) Translates to: ANSASFGFPLYEQNHVRDQPEKL*VKNTSL Trigger: GAGACTGGTGTTTTTCACCAAGAGCTTTTCAGGTTG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR CAA 90 bp | GGTTCAGACGCTGGTGAAGCAAGGTTGAGATTTATAATCCTTGCTGCAAAGGGATCTGACTTGAAACACTaGTCTGATACAATAGCTCAG | + |
Preference number: 3 (lower is better) Translates to: GSDAGEARLRFIILAAKGSDLKH*SDTIAQ Trigger: CTGAGCTATTGTATCAGACAAGTGTTTCAAGTCAGA...TCCCTTTGCAGCAAGGATTATAAATCTCAACCTTGCTTCACCAGCGTCTGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR CAA 90 bp | AGTCACTCTCAGGGGCAATTTGGTCCATTCTTTCTTGTTTCTTGTACCCTTTCCTTACCCATGATAGCATaGAGTTCTGCCAGTAATTTC | + |
Preference number: 3 (lower is better) Translates to: SHSQGQFGPFFLVSCTLSLPMIA*SSASNF Trigger: GAAATTACTGGCAGAACTCAATGCTATCATGGGTAA...GGAAAGGGTACAAGAAACAAGAAAGAATGGACCAAATTGCCCCTGAGAGTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 72 bp | CTTAATCTCCGAGTCTTTGCATTCAGAATTGATGAGTaGACACCAAGTTTCCGCTTCATGCTACTGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: LNLRVFAFRIDE*TPSFRFMLLFS Trigger: TGAGAACAGTAGCATGAAGCGGAAACTTGGTGTTCACTCATCAATTCTGAATGCAAAGACTCGGAGATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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3UTR-3UTR CAA 90 bp | ATGAGTTGGCTTAAGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATCGCATAGAACCTGACTaGAAGCCATTCCCGTACAAT | + |
Preference number: 3 (lower is better) Translates to: MSWLKEITFYNSNHSNTHRIEPD*KPFPYN Trigger: ATTGTACGGGAATGGCTTCAAGTCAGGTTCTATGCG...ATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCTTAAGCCAACTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CAA 90 bp | AGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCTTTAAAACCATTGCATCTTaGCCCAGTCGCATAGAACCT | + |
Preference number: 3 (lower is better) Translates to: RKLHSIIPTTPTPMLFAFKTIAS*PSRIEP Trigger: AGGTTCTATGCGACTGGGCAAAGATGCAATGGTTTT...AAAGGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CAA 90 bp | TTAAGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCGAGAATGTTCCAGAATaGCTGCTAGGCTTGCTTTTG | + |
Preference number: 3 (lower is better) Translates to: LRKLHSIIPTTPTPMLFAENVPE*LLGLLL Trigger: CAAAAGCAAGCCTAGCAGCAATTCTGGAACATTCTC...GGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 72 bp | AGCCAGAAAAATTGCACAAACTGTATTGTAACAACCTaGAAAGCTCTTGGTGAAAAACACCAGTCTCTAGGG | + |
Preference number: 3 (lower is better) Translates to: SQKNCTNCIVTT*KALGEKHQSLG Trigger: CCCTAGAGACTGGTGTTTTTCACCAAGAGCTTTTCAGGTTGTTACAATACAGTTTGTGCAATTTTTCTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAACCTGAAAAGCTCTaGGTGAAAAACACCAGTCTC | + |
Preference number: 3 (lower is better) Translates to: CSFKETTVATYPFTYTMAQPEKL*VKNTSL Trigger: GAGACTGGTGTTTTTCACCAAGAGCTTTTCAGGTTG...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR-3UTR CAA 90 bp | CTGCAGTTGAATCCAAAAGTAATTCTCACTGTTCTAGTTAAAAATTTAGGTCGGCCATTCATGGTGACTTaGTCACTGAAGCCAAAGCAA | + |
Preference number: 3 (lower is better) Translates to: LQLNPKVILTVLVKNLGRPFMVT*SLKPKQ Trigger: TTGCTTTGGCTTCAGTGACAAAGTCACCATGAATGG...CCGACCTAAATTTTTAACTAGAACAGTGAGAATTACTTTTGGATTCAACTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR TCA 72 bp | TCCTCCCTGCAGTCTCATCTAAATCCTCAGGAATTCTaGTGTCGTATTTATCCTTTTCAAAATCAAATTCTG | + |
Preference number: 3 (lower is better) Translates to: SSLQSHLNPQEF*CRIYPFQNQIL Trigger: CAGAATTTGATTTTGAAAAGGATAAATACGACATCAGAATTCCTGAGGATTTAGATGAGACTGCAGGGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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3UTR-3UTR CAA 90 bp | AGGAAATTACATTCTATAATTCCAACCACTCCAACACCCATGTTGTTTGCCTTTGAATTGCTGCTAGGCTaGCTTTTGATTCTGTTAAAT | + |
Preference number: 3 (lower is better) Translates to: RKLHSIIPTTPTPMLFAFELLLG*LLILLN Trigger: ATTTAACAGAATCAAAAGCAAGCCTAGCAGCAATTC...AAAGGCAAACAACATGGGTGTTGGAGTGGTTGGAATTATAGAATGTAATTTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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CDS-3UTR CCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCTCGGCCGCTGCCTGTTaGCCTGTGGACTTCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDASAAAC*PVDFSC Trigger: GCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGA...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACCCCCGTCCACATAACTaGCAGGCTCCTCGGCATTGC | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHPRPHN*QAPRHC Trigger: GCAATGCCGAGGAGCCTGTCAGTTATGTGGACGGGG...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTACCCCGTCCACATAACTaGCAGGCTCCTCGGCATTGC | + |
Preference number: 4 (lower is better) Translates to: MHRIQKDAALQSVTWHALPRPHN*QAPRHC Trigger: GCAATGCCGAGGAGCCTGTCAGTTATGTGGACGGGG...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAATCGGCCGCTGCCTGTTaGCCTGTGGACTTCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYESAAAC*PVDFSC Trigger: GCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGA...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCCTGCTGCAGCGCGCTaGACTGTCTCTTCAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDPAAAR*TVSSAF Trigger: AAAGGCTGAAGAGACAGTGCAGCGCGCTGCAGCAGG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACCAGTCGCATAGAACCTaGCTTGAAGCCATTCCCGTA | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHQSHRT*LEAIPV Trigger: TACGGGAATGGCTTCAAGTCAGGTTCTATGCGACTG...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTACTTACAAGGTCAACATaGATGCCGCTCTGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: MHRIQKDAALQSVTWHALLTRST*MPLCSV Trigger: CACTGAGCAGAGCGGCATTCATGTTGACCTTGTAAG...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACCTTACAAGGTCAACATaGATGCCGCTCTGCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHLTRST*MPLCSV Trigger: CACTGAGCAGAGCGGCATTCATGTTGACCTTGTAAG...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACACTTGTCCAGCTGCCTaGACACATCATCAAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHTCPAA*THHQAA Trigger: TGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGT...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCGCAGCTGTCCTACGTTaGCTCGAAGAGAACGAAGTT | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAAAVLR*LEENEV Trigger: AACTTCGTTCTCTTCGAGTCAACGTAGGACAGCTGC...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCATCGGGACAACAACGTaGTCCGCCTTTATGACTTCC | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAIGTTT*SAFMTS Trigger: GGAAGTCATAAAGGCGGAGCACGTTGTTGTCCCGAT...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTAATCGGGACAACAACGTaGTCCGCCTTTATGACTTCC | + |
Preference number: 4 (lower is better) Translates to: MHRIQKDAALQSVTWHALIGTTT*SAFMTS Trigger: GGAAGTCATAAAGGCGGAGCACGTTGTTGTCCCGAT...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAATGCAGGAAGCCTGGCTaGACTCACTCTTCACCTGCT | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYECRKPG*THSSPA Trigger: AGCAGGTGAAGAGTGAGTGCAGCCAGGCTTCCTGCA...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTGCAGGAAGCCTGGCTaGACTCACTCTTCACCTGCT | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDCRKPG*THSSPA Trigger: AGCAGGTGAAGAGTGAGTGCAGCCAGGCTTCCTGCA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCCTGTGGACTTCAGCTaGTCCACTTCAGTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDPVDFS*STSVCS Trigger: GCTGCAGACTGAAGTGGAGCAGCTGAAGTCCACAGG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTCAGTGCAGGAAGCCTaGCTGCACTCACTCTTCACC | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDSVQEA*LHSLFT Trigger: GGTGAAGAGTGAGTGCAGCCAGGCTTCCTGCACTGA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACACTGGTCCCTCTCAATaGTGCACTTGTCCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDTGPSQ*CTCPAA Trigger: GGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGT...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCCGTCCACGTCATAATTaGCCTGCTGAAGATCCAGAT | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDARPRHN*PAEDPD Trigger: ATCTGGATCTTCAGCAGGTCAATTATGACGTGGACG...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | GTGCTCCGCCTTTATGACTTCCAGGTAGGTCTGAGACAAGAAGCCCACACTCATTACTGTGACCTCCCTTaGTGTCTTTTCACATCTCTT | + |
Preference number: 4 (lower is better) Translates to: VLRLYDFQVGLRQEAHTHYCDLP*CLFTSL Trigger: AAGAGATGTGAAAAGACATCAAGGGAGGTCACAGTA...ATGAGTGTGGGCTTCTTGTCTCAGACCTACCTGGAAGTCATAAAGGCGGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
||
CDS-3UTR GCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCCTGCTGCAGCGCGCTaGACTGTCTCTTCAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILPAAAR*TVSSAF Trigger: AAAGGCTGAAGAGACAGTGCAGCGCGCTGCAGCAGG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCCCCGTACAATCCAACTaGGACATGACCATTCATGGT | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAPVQSN*DMTIHG Trigger: ACCATGAATGGTCATGTCCCAGTTGGATTGTACGGG...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACCGCTCTGCTCAGTGTaGCTCTGTTCTGACTTGACT | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYEPLCSV*LCSDLT Trigger: AGTCAAGTCAGAACAGAGCCACACTGAGCAGAGCGG...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCCGCTCTGCTCAGTGTaGCTCTGTTCTGACTTGACT | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDPLCSV*LCSDLT Trigger: AGTCAAGTCAGAACAGAGCCACACTGAGCAGAGCGG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | GTGCTCCGCCTTTATGACTTCCAGGTAGGTCTGAGACAAGAAGCCCACACTCATCGTTGCCATTATCAGTaGATGTCAAGCATATATGGT | + |
Preference number: 4 (lower is better) Translates to: VLRLYDFQVGLRQEAHTHRCHYQ*MSSIYG Trigger: ACCATATATGCTTGACATTCACTGATAATGGCAACG...ATGAGTGTGGGCTTCTTGTCTCAGACCTACCTGGAAGTCATAAAGGCGGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
||
CDS-3UTR TCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCAGTCGCATAGAACCTaGCTTGAAGCCATTCCCGTA | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDQSHRT*LEAIPV Trigger: TACGGGAATGGCTTCAAGTCAGGTTCTATGCGACTG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACACTTGTCCAGCTGCCTaGACACATCATCAAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDTCPAA*THHQAA Trigger: TGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGT...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAAGAAGAGAACGAAGTTTaGGGCTTTCCCCGTCCACAT | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYEEENEV*GFPRPH Trigger: ATGTGGACGGGGAAAGCCTCAAACTTCGTTCTCTTC...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCGTCCACCTCGCTTTTaGTCTCAGTGCAGGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILRPPRF*SQCRKP Trigger: AGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCTGCCTGTTGGCCTGTaGACTTCAGCTGCTCCACTT | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILLPVGL*TSAAPL Trigger: AAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 72 bp | CTACTGTTCTCAGGTTCAGACGCTGGTGAAGCAAGGTaGAGATTTATAATCCTTGCTGCAAAGGGACTCGTG | + |
Preference number: 4 (lower is better) Translates to: LLFSGSDAGEAR*RFIILAAKGLV Trigger: CACGAGTCCCTTTGCAGCAAGGATTATAAATCTCAACCTTGCTTCACCAGCGTCTGAACCTGAGAACAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
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CDS-3UTR TCA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTACTGAACGGCCAGGTATaGCTAGTAGAATTTGTATGT | + |
Preference number: 4 (lower is better) Translates to: MHRIQKDAALQSVTWHALLNGQV*LVEFVC Trigger: ACATACAAATTCTACTAGTCATACCTGGCCGTTCAG...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCTCAGTTCTTGTAACTaGTGGCTAGTGGCATCTACC | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDLSSCN*WLVAST Trigger: GGTAGATGCCACTAGCCATCAGTTACAAGAACTGAG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGTCCAGGCTCTCAGCCTaGCCGTTAACACTGTCAAGT | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILSRLSA*PLTLSS Trigger: ACTTGACAGTGTTAACGGTCAGGCTGAGAGCCTGGA...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCGTCCACCTCGCTTTTaGTCTCAGTGCAGGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFRPPRF*SQCRKP Trigger: AGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCCTGTGGACTTCAGCTaGTCCACTTCAGTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFPVDFS*STSVCS Trigger: GCTGCAGACTGAAGTGGAGCAGCTGAAGTCCACAGG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTACTCTCAGGGGCAATTTaGTCCATTCTTTCTTGTTTC | + |
Preference number: 4 (lower is better) Translates to: MHRIQKDAALQSVTWHALLSGAI*SILSCF Trigger: GAAACAAGAAAGAATGGACCAAATTGCCCCTGAGAG...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCGTGGGTCAGGGTTATTaGAGCAATACCATTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAVGQGY*SNTIFL Trigger: CAGAAAAATGGTATTGCTCCAATAACCCTGACCCAC...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTACTGGTCCCTCTCAATaGTGCACTTGTCCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFTGPSQ*CTCPAA Trigger: GGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGT...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 72 bp | CTCTCAGGGGCAATTTGGTCCATTCTTTCTTGTTTCTaGTACCCTTTCCTCCCTGCAGTCTCATCTAAATCC | + |
Preference number: 4 (lower is better) Translates to: LSGAIWSILSCF*YPFLPAVSSKS Trigger: GGATTTAGATGAGACTGCAGGGAGGAAAGGGTACAAGAAACAAGAAAGAATGGACCAAATTGCCCCTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACCGTTGCCATTATCAGTaGATGTCAAGCATATATGGT | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHRCHYQ*MSSIYG Trigger: ACCATATATGCTTGACATTCACTGATAATGGCAACG...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAAAATCCAACTGGGACATaGCCATTCATGGTGACTTTG | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYENPTGT*PFMVTL Trigger: CAAAGTCACCATGAATGGTCATGTCCCAGTTGGATT...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACTTTGGTAAAAACCATTaGATCTTTGCCCAGTCGCAT | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHFGKNH*IFAQSH Trigger: ATGCGACTGGGCAAAGATGCAATGGTTTTTACCAAA...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAAGACTTCAGAAAGATGTaGTCTTGGAACGCTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYEDFRKM*SWNALL Trigger: AAGGAGAGCGTTCCAAGACCACATCTTTCTGAAGTC...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTCAGTTTCAGTAGACTaGTGGCACTTCTCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDSVSVD*WHFSFF Trigger: GAAGAAGGAGAAGTGCCACCAGTCTACTGAAACTGA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACCTGAGAATGAATGTGTaGCTTCTCTATTTCCAACAA | + |
Preference number: 4 (lower is better) Translates to: TRMHRIQKDAALQSVTWHLRMNV*LLYFQQ Trigger: TTGTTGGAAATAGAGAAGTCACACATTCATTCTCAG...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCGTCCACGTCATAATTaGCCTGCTGAAGATCCAGAT | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILRPRHN*PAEDPD Trigger: ATCTGGATCTTCAGCAGGTCAATTATGACGTGGACG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAAAACTTCAAGATCTACTaGAGGCTTGGGGGTACTATT | + |
Preference number: 4 (lower is better) Translates to: TTRKSQANSASFGFPLYENFKIY*RLGGTI Trigger: AATAGTACCCCCAAGCCTGCAGTAGATCTTGAAGTT...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGTCCTGGAGGTGGAAGTaGTTGTGGAACTGGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMSWRWK*LWNWPG Trigger: TCCAGGCCAGTTCCACAAGCACTTCCACCTCCAGGA...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTATCCTGGAGGTGGAAGTaGTTGTGGAACTGGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVSWRWK*LWNWPG Trigger: TCCAGGCCAGTTCCACAAGCACTTCCACCTCCAGGA...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTACCTCGTTCTTGTACTaGTCCCTCTCAATGGTGCAC | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFTSFLY*SLSMVH Trigger: GTGCACCATTGAGAGGGACCAGTACAAGAACGAGGT...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCACTGCCTGTTGGCCTGTaGACTTCAGCTGCTCCACTT | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMALPVGL*TSAAPL Trigger: AAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAG...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 72 bp | TTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTaGGCTTTCCTCTCTATGAACAGAATCATGTCAGAG | + |
Preference number: 4 (lower is better) Translates to: LPQEKARQTQLA*AFLSMNRIMSE Trigger: CTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | TTCCTCCCTGCAGTCTCATCTAAATCCTCAGGAATTCTGATGTCGTATTTATCCCTGAACGGCCAGGTATaGCTAGTAGAATTTGTATGT | + |
Preference number: 4 (lower is better) Translates to: FLPAVSSKSSGILMSYLSLNGQV*LVEFVC Trigger: ACATACAAATTCTACTAGTCATACCTGGCCGTTCAG...GGATAAATACGACATCAGAATTCCTGAGGATTTAGATGAGACTGCAGGGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
||
CDS-3UTR TCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCTCAGTTCTTGTAACTaGTGGCTAGTGGCATCTACC | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFLSSCN*WLVAST Trigger: GGTAGATGCCACTAGCCATCAGTTACAAGAACTGAG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCATCCAGGCTCTCAGCCTaGCCGTTAACACTGTCAAGT | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMASRLSA*PLTLSS Trigger: ACTTGACAGTGTTAACGGTCAGGCTGAGAGCCTGGA...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTTTGGTAAAAACCATTaGATCTTTGCCCAGTCGCAT | + |
Preference number: 4 (lower is better) Translates to: ANSASFGFPLYEQNHVRDFGKNH*IFAQSH Trigger: ATGCGACTGGGCAAAGATGCAATGGTTTTTACCAAA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 72 bp | GAGGATTACTTAATCTCCGAGTCTTTGCATTCAGAATaGATGAGTGAACACCAAGTTTCCGCTTCATGCTAC | + |
Preference number: 4 (lower is better) Translates to: EDYLISESLHSE*MSEHQVSASCY Trigger: GTAGCATGAAGCGGAAACTTGGTGTTCACTCATCAATTCTGAATGCAAAGACTCGGAGATTAAGTAATCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232639.2 |
||
CDS-3UTR TCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCAGAAGAGAACGAAGTTTaGGGCTTTCCCCGTCCACAT | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMAEENEV*GFPRPH Trigger: ATGTGGACGGGGAAAGCCTCAAACTTCGTTCTCTTC...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR TCA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAGCAGCTGTCCTACGTTaGCTCGAAGAGAACGAAGTT | + |
Preference number: 4 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVAAVLR*LEENEV Trigger: AACTTCGTTCTCTTCGAGTCAACGTAGGACAGCTGC...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR GCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGGAGATTTATAATCCTTaGTGCAAAGGGACTCGTGAC | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILEIYNP*CKGTRD Trigger: GTCACGAGTCCCTTTGCAGCAAGGATTATAAATCTC...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGGATCTACTGCAGGCTTaGGGGTACTATTTTCTTCTA | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILDLLQA*GYYFLL Trigger: TAGAAGAAAATAGTACCCCCAAGCCTGCAGTAGATC...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTTCAGTTTCAGTAGACTaGTGGCACTTCTCCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFSVSVD*WHFSFF Trigger: GAAGAAGGAGAAGTGCCACCAGTCTACTGAAACTGA...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAACCTCGTTCTTGTACTaGTCCCTCTCAATGGTGCAC | + |
Preference number: 4 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVTSFLY*SLSMVH Trigger: GTGCACCATTGAGAGGGACCAGTACAAGAACGAGGT...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGATTTATAATCCTTGCTaGAAAGGGACTCGTGACTTC | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILIYNPC*KGTRDF Trigger: GAAGTCACGAGTCCCTTTGCAGCAAGGATTATAAAT...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGCCCGTACAATCCAACTaGGACATGACCATTCATGGT | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMPVQSN*DMTIHG Trigger: ACCATGAATGGTCATGTCCCAGTTGGATTGTACGGG...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCAAGAAAGATGTGGTCTTaGAACGCTCTCCTTCACAGG | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMARKMWS*NALLHR Trigger: CCTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCT...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGAGAAAGATGTGGTCTTaGAACGCTCTCCTTCACAGG | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMRKMWS*NALLHR Trigger: CCTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCT...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGATCTACTGCAGGCTTaGGGGTACTATTTTCTTCTA | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFDLLQA*GYYFLL Trigger: TAGAAGAAAATAGTACCCCCAAGCCTGCAGTAGATC...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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3UTR CAA 72 bp | ATGATGATTCTTGTCCCCTTCTTACCCATGATAGCATaGAGTTCTGCCAGTAATTTCTGTTCCGTAGAAAAC | + |
Preference number: 4 (lower is better) Translates to: MMILVPFLPMIA*SSASNFCSVEN Trigger: GTTTTCTACGGAACAGAAATTACTGGCAGAACTCAATGCTATCATGGGTAAGAAGGGGACAAGAATCATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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CDS-3UTR TCA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCGTTGCCATTATCAGTaGATGTCAAGCATATATGGT | + |
Preference number: 4 (lower is better) Translates to: LTISNLTTRKSQANSASFRCHYQ*MSSIYG Trigger: ACCATATATGCTTGACATTCACTGATAATGGCAACG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGAATCCAACTGGGACATaGCCATTCATGGTGACTTTG | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMNPTGT*PFMVTL Trigger: CAAAGTCACCATGAATGGTCATGTCCCAGTTGGATT...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR TCA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCTGAGAATGAATGTGTaGCTTCTCTATTTCCAACAA | + |
Preference number: 4 (lower is better) Translates to: TTVATYPFTYTMAQPSILLRMNV*LLYFQQ Trigger: TTGTTGGAAATAGAGAAGTCACACATTCATTCTCAG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGACAGTTTCTGAACTGTaGGTCAGGGTTATTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMTVSEL*VRVIGA Trigger: TGCTCCAATAACCCTGACCCACAGTTCAGAAACTGT...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCAACAGTTTCTGAACTGTaGGTCAGGGTTATTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMATVSEL*VRVIGA Trigger: TGCTCCAATAACCCTGACCCACAGTTCAGAAACTGT...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAGACTTCAGAAAGATGTaGTCTTGGAACGCTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVDFRKM*SWNALL Trigger: AAGGAGAGCGTTCCAAGACCACATCTTTCTGAAGTC...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGGAGATTTATAATCCTTaGTGCAAAGGGACTCGTGAC | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMEIYNP*CKGTRD Trigger: GTCACGAGTCCCTTTGCAGCAAGGATTATAAATCTC...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR GCA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAAACTTCAAGATCTACTaGAGGCTTGGGGGTACTATT | + |
Preference number: 4 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVNFKIY*RLGGTI Trigger: AATAGTACCCCCAAGCCTGCAGTAGATCTTGAAGTT...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCACTCTCAGGGGCAATTTaGTCCATTCTTTCTTGTTTC | + |
Preference number: 4 (lower is better) Translates to: CSFKETTVATYPFTYTMALSGAI*SILSCF Trigger: GAAACAAGAAAGAATGGACCAAATTGCCCCTGAGAG...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGGTGGGTCAGGGTTATTaGAGCAATACCATTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMVGQGY*SNTIFL Trigger: CAGAAAAATGGTATTGCTCCAATAACCCTGACCCAC...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CCA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGGCAATACCATTTTTCTaGAAGCTGATCTATCCCATC | + |
Preference number: 4 (lower is better) Translates to: EISNNYCTHFMLNQQPKMAIPFF*KLIYPI Trigger: GATGGGATAGATCAGCTTCCAGAAAAATGGTATTGC...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | CACGGTCAGGCCTGGTGCATCGGTCTGAGTGGAGACCGTAATGCCTaGGTCACTCCTGGAGGTGGAAGTGCTTGTGGAACTGGCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: HGQAWCIGLSGDRNA*VTPGGGSACGTGLD Trigger: GTCCAGGCCAGTTCCACAAGCACTTCCACCTCCAGGAGTGACCCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGCCTGACCGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | ACGGCCATCTCGTCCACCTCGCTTTTGCTCTCAGTGCAGGAAGCCTaGCTGCACTCACTCTTCACCTGCTGCAGCGCGCTGCACTGTCTC | + |
Preference number: 5 (lower is better) Translates to: TAISSTSLLLSVQEA*LHSLFTCCSALHCL Trigger: GAGACAGTGCAGCGCGCTGCAGCAGGTGAAGAGTGAGTGCAGCCAGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGAGATGGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | GGCTCCTCGGCATTGCTTGCAGTGGACCCATCGGCCGCTGCCTGTTaGCCTGTGGACTTCAGCTGCTCCACTTCAGTCTGCAGCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: GSSALLAVDPSAAAC*PVDFSCSTSVCSSS Trigger: TGAAGAGCTGCAGACTGAAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGATGGGTCCACTGCAAGCAATGCCGAGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | CGGCATTGCTTGCAGTGGACCCATCGGCCGCTGCCTGTTGGCCTGTaGACTTCAGCTGCTCCACTTCAGTCTGCAGCTCTTCACACTGAG | + |
Preference number: 5 (lower is better) Translates to: RHCLQWTHRPLPVGL*TSAAPLQSAALHTE Trigger: CTCAGTGTGAAGAGCTGCAGACTGAAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGATGGGTCCACTGCAAGCAATGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 90 bp | ACCTCGTTCTTGTACTGGTCCCTCTCAATGGTGCACTTGTCCAGCTaGCTGAACACATCATCAAGCTGCACGGCCATCTCGTCCACCTCG | + |
Preference number: 5 (lower is better) Translates to: TSFLYWSLSMVHLSS*LNTSSSCTAISSTS Trigger: CGAGGTGGACGAGATGGCCGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGTACAAGAACGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 90 bp | CGTTCTTGTACTGGTCCCTCTCAATGGTGCACTTGTCCAGCTGCCTaGACACATCATCAAGCTGCACGGCCATCTCGTCCACCTCGCTTT | + |
Preference number: 5 (lower is better) Translates to: RSCTGPSQWCTCPAA*THHQAARPSRPPRF Trigger: AAAGCGAGGTGGACGAGATGGCCGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGTACAAGAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 90 bp | CTCTCAATGGTGCACTTGTCCAGCTGCCTGAACACATCATCAAGCTaGACGGCCATCTCGTCCACCTCGCTTTTGCTCTCAGTGCAGGAA | + |
Preference number: 5 (lower is better) Translates to: LSMVHLSSCLNTSSS*TAISSTSLLLSVQE Trigger: TTCCTGCACTGAGAGCAAAAGCGAGGTGGACGAGATGGCCGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 90 bp | CATGTCCTCTTCCATACTTTCTTCCTTTTTCACGGTCAGGCCTGGTaGATCGGTCTGAGTGGAGACCGTAATGCCTGGGTCACTCCTGGA | + |
Preference number: 5 (lower is better) Translates to: HVLFHTFFLFHGQAW*IGLSGDRNAWVTPG Trigger: TCCAGGAGTGACCCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGCCTGACCGTGAAAAAGGAAGAAAGTATGGAAGAGGACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | ACCCATGTCCTCTTCCATACTTTCTTCCTTTTTCACGGTCAGGCCTaGTGCATCGGTCTGAGTGGAGACCGTAATGCCTGGGTCACTCCT | + |
Preference number: 5 (lower is better) Translates to: THVLFHTFFLFHGQA*CIGLSGDRNAWVTP Trigger: AGGAGTGACCCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGCCTGACCGTGAAAAAGGAAGAAAGTATGGAAGAGGACATGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 90 bp | TCTCCTGCACTTTTGCCTCAGTACCGACACAGGACAGGGTGGCTGTaGCGTTCCTCACACCCATGTCCTCTTCCATACTTTCTTCCTTTT | + |
Preference number: 5 (lower is better) Translates to: SPALLPQYRHRTGWL*RSSHPCPLPYFLPF Trigger: AAAAGGAAGAAAGTATGGAAGAGGACATGGGTGTGAGGAACGGCACAGCCACCCTGTCCTGTGTCGGTACTGAGGCAAAAGTGCAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTATGGAGGTGGAAGTGCTaGTGGAACTGGCCTGGACAC | + |
Preference number: 5 (lower is better) Translates to: MHRIQKDAALQSVTWHALWRWKC*WNWPGH Trigger: GTGTCCAGGCCAGTTCCACAAGCACTTCCACCTCCA...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 90 bp | GAACTGGCCTGGACACAAGGCTTAGGACTGCTTACAAGGTCAACATaGATGCCGCTCTGCTCAGTGTGGCTCTGTTCTGACTTGACTTCA | + |
Preference number: 5 (lower is better) Translates to: ELAWTQGLGLLTRST*MPLCSVWLCSDLTS Trigger: TGAAGTCAAGTCAGAACAGAGCCACACTGAGCAGAGCGGCATTCATGTTGACCTTGTAAGCAGTCCTAAGCCTTGTGTCCAGGCCAGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAATCGTCCACCTCGCTTTaGCTCTCAGTGCAGGAAGCC | + |
Preference number: 5 (lower is better) Translates to: TTRKSQANSASFGFPLYESSTSL*LSVQEA Trigger: GGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGA...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCAGGGAGGATTTCCGGTaGTCTGATCCTGAATCTCTC | + |
Preference number: 5 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAREDFR*SDPESL Trigger: GAGAGATTCAGGATCAGACAACCGGAAATCCTCCCT...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACAGCAGCTGTCCTACGTaGACTCGAAGAGAACGAAGT | + |
Preference number: 5 (lower is better) Translates to: TRMHRIQKDAALQSVTWHSSCPT*TRRERS Trigger: ACTTCGTTCTCTTCGAGTCAACGTAGGACAGCTGCT...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCCCATTCATGGTGACTTaGTCACTGAAGCCAAAGCTT | + |
Preference number: 5 (lower is better) Translates to: LCVHSAWDTRMHRIQKDAPFMVT*SLKPKL Trigger: AAGCTTTGGCTTCAGTGACAAAGTCACCATGAATGG...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCAGAAAGATGTGGTCTaGGAACGCTCTCCTTCACAG | + |
Preference number: 5 (lower is better) Translates to: ANSASFGFPLYEQNHVRDQKDVV*ERSPSQ Trigger: CTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCTG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CAA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTAAGATCTACTGCAGGCTaGGGGGTACTATTTTCTTCT | + |
Preference number: 5 (lower is better) Translates to: MHRIQKDAALQSVTWHALRSTAG*GVLFSS Trigger: AGAAGAAAATAGTACCCCCAAGCCTGCAGTAGATCT...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
||
CDS-3UTR CAA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGATCGGCCGCTGCCTGTaGGCCTGTGGACTTCAGCTG | + |
Preference number: 5 (lower is better) Translates to: EISNNYCTHFMLNQQPKMIGRCL*ACGLQL Trigger: CAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGAT...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 90 bp | CTGCTCCACTTCAGTCTGCAGCTCTTCACACTGAGAATGAATGTGTaGCTTCTCTATTTCCAACAACTGAACCTCGTTCTTGTACTGGTC | + |
Preference number: 5 (lower is better) Translates to: LLHFSLQLFTLRMNV*LLYFQQLNLVLVLV Trigger: GACCAGTACAAGAACGAGGTTCAGTTGTTGGAAATAGAGAAGTCACACATTCATTCTCAGTGTGAAGAGCTGCAGACTGAAGTGGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACCGCATAGAACCTGACTaGAAGCCATTCCCGTACAAT | + |
Preference number: 5 (lower is better) Translates to: ANSASFGFPLYEQNHVRDRIEPD*KPFPYN Trigger: ATTGTACGGGAATGGCTTCAAGTCAGGTTCTATGCG...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTAACTCTCAGGGGCAATTaGGTCCATTCTTTCTTGTTT | + |
Preference number: 5 (lower is better) Translates to: MHRIQKDAALQSVTWHALTLRGN*VHSFLF Trigger: AAACAAGAAAGAATGGACCAAATTGCCCCTGAGAGT...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCACTCTCAGGGGCAATTaGGTCCATTCTTTCTTGTTT | + |
Preference number: 5 (lower is better) Translates to: LCVHSAWDTRMHRIQKDATLRGN*VHSFLF Trigger: AAACAAGAAAGAATGGACCAAATTGCCCCTGAGAGT...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTATGTGGGTCAGGGTTATaGGAGCAATACCATTTTTCT | + |
Preference number: 5 (lower is better) Translates to: MHRIQKDAALQSVTWHALCGSGL*EQYHFS Trigger: AGAAAAATGGTATTGCTCCAATAACCCTGACCCACA...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTAGGTCTCCTGCACTTTaGCCTCAGTACCGACACAGG | + |
Preference number: 5 (lower is better) Translates to: LTISNLTTRKSQANSASFRSPAL*PQYRHR Trigger: CCTGTGTCGGTACTGAGGCAAAAGTGCAGGAGACCT...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 90 bp | AACTGTGGGTCAGGGTTATTGGAGCAATACCATTTTTCTGGAAGCTaGTCTATCCCATCTGGTAACTTTCGCCACTTTAGACAAGCGTCA | + |
Preference number: 5 (lower is better) Translates to: NCGSGLLEQYHFSGS*SIPSGNFRHFRQAS Trigger: TGACGCTTGTCTAAAGTGGCGAAAGTTACCAGATGGGATAGATCAGCTTCCAGAAAAATGGTATTGCTCCAATAACCCTGACCCACAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044068.10 ENSMUST00000201097.3 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGTGTGTCCACAGTGCCTGGGACACTCGAATGCATAGAATACAGAAAGATGCCTTACCCATGATAGCATaGAGTTCTGCCAGTAATTTC | + |
Preference number: 5 (lower is better) Translates to: LCVHSAWDTRMHRIQKDALPMIA*SSASNF Trigger: GAAATTACTGGCAGAACTCAATGCTATCATGGGTAA...GGCATCTTTCTGTATTCTATGCATTCGAGTGTCCCAGGCACTGTGGACACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACTCGAATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACTGTAGGCAAGACTCTTaGAAACTAGTTGTGTCTTCA | + |
Preference number: 5 (lower is better) Translates to: TRMHRIQKDAALQSVTWHCRQDS*KLVVSS Trigger: TGAAGACACAACTAGTTTCAAAGAGTCTTGCCTACA...GTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCATTCGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGCAGAAAGATGTGGTCTaGGAACGCTCTCCTTCACAG | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILQKDVV*ERSPSQ Trigger: CTGTGAAGGAGAGCGTTCCAAGACCACATCTTTCTG...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGTGGAGGTGGAAGTGCTaGTGGAACTGGCCTGGACAC | + |
Preference number: 5 (lower is better) Translates to: EISNNYCTHFMLNQQPKMWRWKC*WNWPGH Trigger: GTGTCCAGGCCAGTTCCACAAGCACTTCCACCTCCA...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCATCGTCCACCTCGCTTTaGCTCTCAGTGCAGGAAGCC | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMASSTSL*LSVQEA Trigger: GGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGA...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGAGCAGCTGTCCTACGTaGACTCGAAGAGAACGAAGT | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILSSCPT*TRRERS Trigger: ACTTCGTTCTCTTCGAGTCAACGTAGGACAGCTGCT...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAATGTGGGTCAGGGTTATaGGAGCAATACCATTTTTCT | + |
Preference number: 5 (lower is better) Translates to: TTRKSQANSASFGFPLYECGSGL*EQYHFS Trigger: AGAAAAATGGTATTGCTCCAATAACCCTGACCCACA...TTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ATGCATAGAATACAGAAAGATGCCGCTCTTCAGTCTGTGACCTGGCACGCGTTATTAATCTCCGAGTCTTaGCATTCAGAATTGATGAGT | + |
Preference number: 5 (lower is better) Translates to: MHRIQKDAALQSVTWHALLISES*HSELMS Trigger: ACTCATCAATTCTGAATGCAAAGACTCGGAGATTAA...TAACGCGTGCCAGGTCACAGACTGAAGAGCGGCATCTTTCTGTATTCTATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | AGTAATTTCTGTTCCGTAGAAAACAGAGAATGTTCCAGAATTGCTGCTAGGCTTTCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTC | + |
Preference number: 5 (lower is better) Translates to: SNFCSVENRECSRIAARLSAVIP*PLSVNV Trigger: GACATTCACTGATAATGGCAACGGGATGACAGCAGA...AAGCCTAGCAGCAATTCTGGAACATTCTCTGTTTTCTACGGAACAGAAATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGAAAACCATTGCATCTTaGCCCAGTCGCATAGAACCT | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILKTIAS*PSRIEP Trigger: AGGTTCTATGCGACTGGGCAAAGATGCAATGGTTTT...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGGAGAATGTTCCAGAATaGCTGCTAGGCTTGCTTTTG | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILENVPE*LLGLLL Trigger: CAAAAGCAAGCCTAGCAGCAATTCTGGAACATTCTC...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTGTAGGCAAGACTCTTaGAAACTAGTTGTGTCTTCA | + |
Preference number: 5 (lower is better) Translates to: ANSASFGFPLYEQNHVRDCRQDS*KLVVSS Trigger: TGAAGACACAACTAGTTTCAAAGAGTCTTGCCTACA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGAGATCTACTGCAGGCTaGGGGGTACTATTTTCTTCT | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILRSTAG*GVLFSS Trigger: AGAAGAAAATAGTACCCCCAAGCCTGCAGTAGATCT...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTAAAACCATTGCATCTTaGCCCAGTCGCATAGAACCT | + |
Preference number: 5 (lower is better) Translates to: LTISNLTTRKSQANSASFKTIAS*PSRIEP Trigger: AGGTTCTATGCGACTGGGCAAAGATGCAATGGTTTT...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | ACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAGCCCTCGATTTTGATTCTTTCTTGTTTCTaGTACCCTTTCCTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: TTVATYPFTYTMAQPSILILSCF*YPFLPA Trigger: TGCAGGGAGGAAAGGGTACAAGAAACAAGAAAGAAT...CAAAATCGAGGGCTGTGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCAAGGGAGGATTTCCGGTaGTCTGATCCTGAATCTCTC | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMAREDFR*SDPESL Trigger: GAGAGATTCAGGATCAGACAACCGGAAATCCTCCCT...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GCAAACTCAGCTAGCTTTGGCTTTCCTCTCTATGAACAGAATCATGTCAGAGACTCTTTGCATTCAGAATaGATGAGTGAACACCAAGTT | + |
Preference number: 5 (lower is better) Translates to: ANSASFGFPLYEQNHVRDSLHSE*MSEHQV Trigger: AACTTGGTGTTCACTCATCAATTCTGAATGCAAAGA...GTCTCTGACATGATTCTGTTCATAGAGAGGAAAGCCAAAGCTAGCTGAGTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 90 bp | TCTGCTGTCATCCCGTTGCCATTATCAGTGAATGTCAAGCATATATaGTCACTAATCACTGTTTTATCGATCCAGATCTGTTTAGCATTC | + |
Preference number: 5 (lower is better) Translates to: SAVIPLPLSVNVKHI*SLITVLSIQICLAF Trigger: GAATGCTAAACAGATCTGGATCGATAAAACAGTGATTAGTGACCATATATGCTTGACATTCACTGATAATGGCAACGGGATGACAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044068.10 ENSMUST00000201754.4 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTATCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTC | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVSAVIP*PLSVNV Trigger: GACATTCACTGATAATGGCAACGGGATGACAGCAGA...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCATCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTC | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMASAVIP*PLSVNV Trigger: GACATTCACTGATAATGGCAACGGGATGACAGCAGA...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGCGCATAGAACCTGACTaGAAGCCATTCCCGTACAAT | + |
Preference number: 5 (lower is better) Translates to: EISNNYCTHFMLNQQPKMRIEPD*KPFPYN Trigger: ATTGTACGGGAATGGCTTCAAGTCAGGTTCTATGCG...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTGACAATTAGCAATCTTACCACAAGAAAAAGCCAGGCAAACTCAGCTAGCTTTCAACACCCATGTTGTTaGCCTTTAACTGACATCCTA | + |
Preference number: 5 (lower is better) Translates to: LTISNLTTRKSQANSASFQHPCC*PLTDIL Trigger: TAGGATGTCAGTTAAAGGCAAACAACATGGGTGTTG...AAAGCTAGCTGAGTTTGCCTGGCTTTTTCTTGTGGTAAGATTGCTAATTGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTACCATTCATGGTGACTTaGTCACTGAAGCCAAAGCTT | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVPFMVT*SLKPKL Trigger: AAGCTTTGGCTTCAGTGACAAAGTCACCATGAATGG...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAGAGAATGTTCCAGAATaGCTGCTAGGCTTGCTTTTG | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVENVPE*LLGLLL Trigger: CAAAAGCAAGCCTAGCAGCAATTCTGGAACATTCTC...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCAATTCTTTCTTGTTTCTaGTACCCTTTCCTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMAILSCF*YPFLPA Trigger: TGCAGGGAGGAAAGGGTACAAGAAACAAGAAAGAAT...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCACAACACCCATGTTGTTaGCCTTTAACTGACATCCTA | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMAQHPCC*PLTDIL Trigger: TAGGATGTCAGTTAAAGGCAAACAACATGGGTGTTG...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | GAAATCTCAAATAATTATTGCACCCACTTCATGCTGAATCAACAGCCAAAAATGTCTGACTTGAAACACTaGTCTGATACAATAGCTCAG | + |
Preference number: 5 (lower is better) Translates to: EISNNYCTHFMLNQQPKMSDLKH*SDTIAQ Trigger: CTGAGCTATTGTATCAGACAAGTGTTTCAAGTCAGA...CATTTTTGGCTGTTGATTCAGCATGAAGTGGGTGCAATAATTATTTGAGATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTATCTGACTTGAAACACTaGTCTGATACAATAGCTCAG | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVSDLKH*SDTIAQ Trigger: CTGAGCTATTGTATCAGACAAGTGTTTCAAGTCAGA...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTAGAATTGCTGCTAGGCTaGCTTTTGATTCTGTTAAAT | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVELLLG*LLILLN Trigger: ATTTAACAGAATCAAAAGCAAGCCTAGCAGCAATTC...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TGCTCATTTAAGGAAACAACAGTAGCAACTTATCCATTTACATACACTATGGCATCTTTGCATTCAGAATaGATGAGTGAACACCAAGTT | + |
Preference number: 5 (lower is better) Translates to: CSFKETTVATYPFTYTMASLHSE*MSEHQV Trigger: AACTTGGTGTTCACTCATCAATTCTGAATGCAAAGA...TGCCATAGTGTATGTAAATGGATAAGTTGCTACTGTTGTTTCCTTAAATGAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTATTAATCTCCGAGTCTTaGCATTCAGAATTGATGAGT | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVLISES*HSELMS Trigger: ACTCATCAATTCTGAATGCAAAGACTCGGAGATTAA...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS-3UTR CAA 90 bp | TTCAACTTCGTATACAACAGATGTGTAGTTAACCACACACACAATGAGTATGTATGGCTCTGTTCTGACTaGACTTCAATATCTGATTTA | + |
Preference number: 5 (lower is better) Translates to: FNFVYNRCVVNHTHNEYVWLCSD*TSISDL Trigger: TAAATCAGATATTGAAGTCAAGTCAGAACAGAGCCA...TACATACTCATTGTGTGTGTGGTTAACTACACATCTGTTGTATACGAAGTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | GGCATCTACCGACTCAGCCGAGGTCTCCTGCACTTTTaGCTCAGTACCGACACAGGACAGGGTGGCTGTGCC | + |
Preference number: 6 (lower is better) Translates to: GIYRLSRGLLHF*LSTDTGQGGCA Trigger: GGCACAGCCACCCTGTCCTGTGTCGGTACTGAGGCAAAAGTGCAGGAGACCTCGGCTGAGTCGGTAGATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 72 bp | GCATTGCTTGCAGTGGACCCATCGGCCGCTGCCTGTTaGCCTGTGGACTTCAGCTGCTCCACTTCAGTCTGC | + |
Preference number: 6 (lower is better) Translates to: ALLAVDPSAAAC*PVDFSCSTSVC Trigger: GCAGACTGAAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGATGGGTCCACTGCAAGCAATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | GCACGGCCATCTCGTCCACCTCGCTTTTGCTCTCAGTaGAGGAAGCCTGGCTGCACTCACTCTTCACCTGCT | + |
Preference number: 6 (lower is better) Translates to: ARPSRPPRFCSQ*RKPGCTHSSPA Trigger: AGCAGGTGAAGAGTGAGTGCAGCCAGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGAGATGGCCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 72 bp | TTGCAGTGGACCCATCGGCCGCTGCCTGTTGGCCTGTaGACTTCAGCTGCTCCACTTCAGTCTGCAGCTCTT | + |
Preference number: 6 (lower is better) Translates to: LQWTHRPLPVGL*TSAAPLQSAAL Trigger: AAGAGCTGCAGACTGAAGTGGAGCAGCTGAAGTCCACAGGCCAACAGGCAGCGGCCGATGGGTCCACTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | TGGCATCTACCGACTCAGCCGAGGTCTCCTGCACTTTaGCCTCAGTACCGACACAGGACAGGGTGGCTGTGC | + |
Preference number: 6 (lower is better) Translates to: WHLPTQPRSPAL*PQYRHRTGWLC Trigger: GCACAGCCACCCTGTCCTGTGTCGGTACTGAGGCAAAAGTGCAGGAGACCTCGGCTGAGTCGGTAGATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | CATCAAGCTGCACGGCCATCTCGTCCACCTCGCTTTTaGTCTCAGTGCAGGAAGCCTGGCTGCACTCACTCT | + |
Preference number: 6 (lower is better) Translates to: HQAARPSRPPRF*SQCRKPGCTHS Trigger: AGAGTGAGTGCAGCCAGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGAGATGGCCGTGCAGCTTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 72 bp | GCCTGGTGCATCGGTCTGAGTGGAGACCGTAATGCCTaGGTCACTCCTGGAGGTGGAAGTGCTTGTGGAACT | + |
Preference number: 6 (lower is better) Translates to: AWCIGLSGDRNA*VTPGGGSACGT Trigger: AGTTCCACAAGCACTTCCACCTCCAGGAGTGACCCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | TCATCAAGCTGCACGGCCATCTCGTCCACCTCGCTTTaGCTCTCAGTGCAGGAAGCCTGGCTGCACTCACTC | + |
Preference number: 6 (lower is better) Translates to: SSSCTAISSTSL*LSVQEAWLHSL Trigger: GAGTGAGTGCAGCCAGGCTTCCTGCACTGAGAGCAAAAGCGAGGTGGACGAGATGGCCGTGCAGCTTGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 72 bp | ACTGGTCCCTCTCAATGGTGCACTTGTCCAGCTGCCTaGACACATCATCAAGCTGCACGGCCATCTCGTCCA | + |
Preference number: 6 (lower is better) Translates to: TGPSQWCTCPAA*THHQAARPSRP Trigger: TGGACGAGATGGCCGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | GCTGCACTGTCTCTTCAGCCTTTCTATCTCCTGCAGTaGTTGCTGGTACTGAGACCCCAAGTGGTCCAGGCT | + |
Preference number: 6 (lower is better) Translates to: AALSLQPFYLLQ*LLVLRPQVVQA Trigger: AGCCTGGACCACTTGGGGTCTCAGTACCAGCAAGCACTGCAGGAGATAGAAAGGCTGAAGAGACAGTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | GCACTGTCTCTTCAGCCTTTCTATCTCCTGCAGTGCTaGCTGGTACTGAGACCCCAAGTGGTCCAGGCTCTC | + |
Preference number: 6 (lower is better) Translates to: ALSLQPFYLLQC*LVLRPQVVQAL Trigger: GAGAGCCTGGACCACTTGGGGTCTCAGTACCAGCAAGCACTGCAGGAGATAGAAAGGCTGAAGAGACAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | CTTTTGCCTCAGTACCGACACAGGACAGGGTGGCTGTaGCGTTCCTCACACCCATGTCCTCTTCCATACTTT | + |
Preference number: 6 (lower is better) Translates to: LLPQYRHRTGWL*RSSHPCPLPYF Trigger: AAAGTATGGAAGAGGACATGGGTGTGAGGAACGGCACAGCCACCCTGTCCTGTGTCGGTACTGAGGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | TTGTACTGGTCCCTCTCAATGGTGCACTTGTCCAGCTaGCTGAACACATCATCAAGCTGCACGGCCATCTCG | + |
Preference number: 6 (lower is better) Translates to: LYWSLSMVHLSS*LNTSSSCTAIS Trigger: CGAGATGGCCGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGTACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS GCA 72 bp | TTCCATACTTTCTTCCTTTTTCACGGTCAGGCCTGGTaGATCGGTCTGAGTGGAGACCGTAATGCCTGGGTC | + |
Preference number: 6 (lower is better) Translates to: FHTFFLFHGQAW*IGLSGDRNAWV Trigger: GACCCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGCCTGACCGTGAAAAAGGAAGAAAGTATGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CCA 72 bp | CTCTTCCATACTTTCTTCCTTTTTCACGGTCAGGCCTaGTGCATCGGTCTGAGTGGAGACCGTAATGCCTGG | + |
Preference number: 6 (lower is better) Translates to: LFHTFFLFHGQA*CIGLSGDRNAW Trigger: CCAGGCATTACGGTCTCCACTCAGACCGATGCACCAGGCCTGACCGTGAAAAAGGAAGAAAGTATGGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | ACCTCGTTCTTGTACTGGTCCCTCTCAATGGTGCACTaGTCCAGCTGCCTGAACACATCATCAAGCTGCACG | + |
Preference number: 6 (lower is better) Translates to: TSFLYWSLSMVH*SSCLNTSSSCT Trigger: CGTGCAGCTTGATGATGTGTTCAGGCAGCTGGACAAGTGCACCATTGAGAGGGACCAGTACAAGAACGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | AGATCAGGCACGATCATAGCCAGCAGCTGTCCTACGTaGACTCGAAGAGAACGAAGTTTGAGGCTTTCCCCG | + |
Preference number: 6 (lower is better) Translates to: RSGTIIASSCPT*TRRERSLRLSP Trigger: CGGGGAAAGCCTCAAACTTCGTTCTCTTCGAGTCAACGTAGGACAGCTGCTGGCTATGATCGTGCCTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 72 bp | TGGACACAAGGCTTAGGACTGCTTACAAGGTCAACATaGATGCCGCTCTGCTCAGTGTGGCTCTGTTCTGAC | + |
Preference number: 6 (lower is better) Translates to: WTQGLGLLTRST*MPLCSVWLCSD Trigger: GTCAGAACAGAGCCACACTGAGCAGAGCGGCATTCATGTTGACCTTGTAAGCAGTCCTAAGCCTTGTGTCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | TCAGTAGACTGGTGGCACTTCTCCTTCTTCACGCACTaGTCGTTCATCTCCAATAGTCTTTGCTGTAACACC | + |
Preference number: 6 (lower is better) Translates to: SVDWWHFSFFTH*SFISNSLCCNT Trigger: GGTGTTACAGCAAAGACTATTGGAGATGAACGACAAGTGCGTGAAGAAGGAGAAGTGCCACCAGTCTACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS TCA 72 bp | TCAGGGTTATTGGAGCAATACCATTTTTCTGGAAGCTaGTCTATCCCATCTGGTAACTTTCGCCACTTTAGA | + |
Preference number: 6 (lower is better) Translates to: SGLLEQYHFSGS*SIPSGNFRHFR Trigger: TCTAAAGTGGCGAAAGTTACCAGATGGGATAGATCAGCTTCCAGAAAAATGGTATTGCTCCAATAACCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044068.10 ENSMUST00000201097.3 ENSMUST00000202261.5 |
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CDS TCA 72 bp | TTCAGTCTGCAGCTCTTCACACTGAGAATGAATGTGTaGCTTCTCTATTTCCAACAACTGAACCTCGTTCTT | + |
Preference number: 6 (lower is better) Translates to: FSLQLFTLRMNV*LLYFQQLNLVL Trigger: AAGAACGAGGTTCAGTTGTTGGAAATAGAGAAGTCACACATTCATTCTCAGTGTGAAGAGCTGCAGACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 90 bp | AAGCCAAAGCTTAGCATTTTATGTAACTTATCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTCAAGCATATATGGTCACTAATCACT | + |
Preference number: 6 (lower is better) Translates to: KPKLSILCNLSAVIP*PLSVNVKHIWSLIT Trigger: AGTGATTAGTGACCATATATGCTTGACATTCACTGATAATGGCAACGGGATGACAGCAGATAAGTTACATAAAATGCTAAGCTTTGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044068.10 ENSMUST00000202261.5 |
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CDS CAA 72 bp | CTTAGCATTTTATGTAACTTATCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTCAAGCATATATGGTCA | + |
Preference number: 6 (lower is better) Translates to: LSILCNLSAVIP*PLSVNVKHIWS Trigger: TGACCATATATGCTTGACATTCACTGATAATGGCAACGGGATGACAGCAGATAAGTTACATAAAATGCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044068.10 ENSMUST00000201754.4 ENSMUST00000202261.5 |
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CDS CAA 90 bp | TTCACATCTCTTAGCATTTTATGTAACTTATCTGCTGTCATCCCGTaGCCATTATCAGTGAATGTCAAGCATATATGGTCACTAATCACT | + |
Preference number: 6 (lower is better) Translates to: FTSLSILCNLSAVIP*PLSVNVKHIWSLIT Trigger: AGTGATTAGTGACCATATATGCTTGACATTCACTGATAATGGCAACGGGATGACAGCAGATAAGTTACATAAAATGCTAAGAGATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201754.4 |