RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORC2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048602

Ensembl transcript IDs: ENSMUST00000053896.8, ENSMUST00000131954.2

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCAGGTGCTCCCCCATTaGCCGCAGAAGGTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESQVLPH*PQKVAV
Trigger: TACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCAGTACTGTGCCAGGTaGTCCCCCATTGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESQYCAR*SPIARR
Trigger: TCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCAGTACTGTGCCAGGTaGTCCCCCATTGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLQYCAR*SPIARR
Trigger: TCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGGAGGTCTGCTGCAGTaGCAAAGCCTGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFGGLLQ*QSLLDH
Trigger: GTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCCTGGAGTCCCGGGTaGTGTCTCCACCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPWSPG*CLHPCV
Trigger: TACACATGGGTGGAGACATCACCCGGGACTCCAGGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLAVFWT*RNITLE
Trigger: CTCCAGGGTGATGTTGCGTCAGGTCCAGAATACAGC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTACGGGCTTTGCTCTCTaGTTCCCGGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFTGFAL*FPGLLF
Trigger: GAAGAGAAGGCCCGGGAAGCAGAGAGCAAAGCCCGT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCTAATGTACGGGCTTTaGTCTCTGCTTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLLMYGL*SLLPGP
Trigger: AGGCCCGGGAAGCAGAGAGCAAAGCCCGTACATTAG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACAGGTGCTCCCCCATTaGCCGCAGAAGGTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTQVLPH*PQKVAV
Trigger: TACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTGCAGTGCCAAAGCCTaGTGGACCACAGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFCSAKA*WTTVSS
Trigger: GGAGGACACTGTGGTCCAGCAGGCTTTGGCACTGCA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGCGAGCTGTGCTACCTaGTCTGCCTTCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLASCAT*SAFFTS
Trigger: AGAGGTGAAGAAGGCAGACCAGGTAGCACAGCTCGC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGGGTGTCTCGGGTGGCTaGAGCAGCACAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEGVSGG*SSTASV
Trigger: AACAGAGGCTGTGCTGCTCCAGCCACCCGAGACACC...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAGTGCCAAAGCCTGCTaGACCACAGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSAKAC*TTVSSS
Trigger: GGAGGAGGACACTGTGGTCCAGCAGGCTTTGGCACT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCCTGGAGTCCCGGGTaGTGTCTCCACCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTPWSPG*CLHPCV
Trigger: TACACATGGGTGGAGACATCACCCGGGACTCCAGGG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNAVFWT*RNITLE
Trigger: CTCCAGGGTGATGTTGCGTCAGGTCCAGAATACAGC...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCAGTAGGGCACATCAATaGCTCCAACAACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSRAHQ*LQQPHH
Trigger: GTGGTGGGGTTGTTGGAGTCATTGATGTGCCCTACT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCATGTTTATGCCCTGCTaGGCCATTTGCAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESMFMPC*AICRSV
Trigger: GACGCTCCTGCAAATGGCTCAGCAGGGCATAAACAT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGCTCATCATCTGCCCTaGTGTTTATGCCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESAHHLP*CLCPAE
Trigger: CTCAGCAGGGCATAAACATCAGGGCAGATGATGAGC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACACGGGCTTTGCTCTCTaGTTCCCGGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHTGFAL*FPGLLF
Trigger: GAAGAGAAGGCCCGGGAAGCAGAGAGCAAAGCCCGT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTCTACAGCACTTAACTaGAAGGGGAGGGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSTALN*KGRVLH
Trigger: GTGGAGGACCCTCCCCTTCCAGTTAAGTGCTGTAGA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAGGTGTCTCGGGTGGCTaGAGCAGCACAGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTGVSGG*SSTASV
Trigger: AACAGAGGCTGTGCTGCTCCAGCCACCCGAGACACC...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCACCAGAGGTGGGGGTTaGGGTATAGTTTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLTRGGG*GIVLTR
Trigger: CCTGGTCAAAACTATACCCCAACCCCCACCTCTGGT...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCTTCTCTTCGGAGAGTaGTGGCTGTATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESLLFGE*WLYSGP
Trigger: AGGTCCAGAATACAGCCATCACTCTCCGAAGAGAAG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGTAGGGCACATCAATaGCTCCAACAACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSRAHQ*LQQPHH
Trigger: GTGGTGGGGTTGTTGGAGTCATTGATGTGCCCTACT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTCCCCAGAGCTGTCTaGGAGCTCACTTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLFPRAV*ELTCLN
Trigger: ATTCAAGCAAGTGAGCTCTCAGACAGCTCTGGGGAA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCATTTGCAGGAGCGTCTaGATGTTGGTCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLICRSV*MLVLSF
Trigger: GAAGCTGAGGACCAACATTCAGACGCTCCTGCAAAT...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCTAATGTACGGGCTTTaGTCTCTGCTTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEELMYGL*SLLPGP
Trigger: AGGCCCGGGAAGCAGAGAGCAAAGCCCGTACATTAG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGCAGCAGAGCTTTTTaGTCTGCACCTTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSSRAF*SAPCAR
Trigger: ACGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAGCAGCAGAGCTTTTTaGTCTGCACCTTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSSRAF*SAPCAR
Trigger: ACGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGGCGAGCTGTGCTACCTaGTCTGCCTTCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEASCAT*SAFFTS
Trigger: AGAGGTGAAGAAGGCAGACCAGGTAGCACAGCTCGC...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGCCCTTTTCCAGCTGTaGGCCCACTTTCTCATACAT +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLALFQL*AHFLIH
Trigger: ATGTATGAGAAAGTGGGCCCACAGCTGGAAAAGGGC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTCAAAAGCCTCACACTaGTCCTGTTCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSKASH*SCSGSG
Trigger: CCCTGATCCTGAACAGGACCAGTGTGAGGCTTTTGA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTACCAGAGGTGGGGGTTaGGGTATAGTTTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFTRGGG*GIVLTR
Trigger: CCTGGTCAAAACTATACCCCAACCCCCACCTCTGGT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAAGTGCCAAAGCCTGCTaGACCACAGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTSAKAC*TTVSSS
Trigger: GGAGGAGGACACTGTGGTCCAGCAGGCTTTGGCACT...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGAGCGGCAGAGATTCTaGAGTCCGACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLERQRF*SPTSYC
Trigger: GCAATATGAAGTCGGACTCCAGAATCTCTGCCGCTC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGAGCGGCAGAGATTCTaGAGTCCGACTTCATATTGC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESERQRF*SPTSYC
Trigger: GCAATATGAAGTCGGACTCCAGAATCTCTGCCGCTC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTGCACCTTGTGCCCGTaGATAAAAATCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLCTLCP*IKILIR
Trigger: TCGGATGAGGATTTTTATTCACGGGCACAAGGTGCA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCTTCTCTTCGGAGAGTaGTGGCTGTATTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFLLFGE*WLYSGP
Trigger: AGGTCCAGAATACAGCCATCACTCTCCGAAGAGAAG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTTCCTCTGCTCCTGTTaGATTTTCTCTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESFLCSC*IFSVSC
Trigger: GCAGCTGACAGAGAAAATTCAACAGGAGCAGAGGAA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTTCCCCAGAGCTGTCTaGGAGCTCACTTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFFPRAV*ELTCLN
Trigger: ATTCAAGCAAGTGAGCTCTCAGACAGCTCTGGGGAA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGTTTATGCCCTGCTaGGCCATTTGCAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHMFMPC*AICRSV
Trigger: GACGCTCCTGCAAATGGCTCAGCAGGGCATAAACAT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCTGTGCTACCTGGTCTaGCTTCTTCACCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFLCYLV*LLHLLF
Trigger: GAACAAGAGGTGAAGAAGGCAGACCAGGTAGCACAG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCTTAGGTTCTTTGAGTaGTTGCTGCTTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESLRFFE*LLLGVS
Trigger: AGAGACGCCAAGCAGCAAGCACTCAAAGAACCTAAG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCTTGCTGTTCATCAGTaGTCTGGTACTCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLLAVHQ*SGTLEM
Trigger: CATCTCCAGAGTACCAGAGCACTGATGAACAGCAAG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATGCCCTTTTCCAGCTGTaGGCCCACTTTCTCATACAT +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNALFQL*AHFLIH
Trigger: ATGTATGAGAAAGTGGGCCCACAGCTGGAAAAGGGC...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGGGTGGCGGTACTCCTTaGCATCAGCAAAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEGGGTP*HQQSLA
Trigger: AGCAAGACTTTGCTGATGCCAAGGAGTACCGCCACC...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCATGCAACTCATCAGATaGGGGTCTGTTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLMQLIR*GSVPVS
Trigger: GCTAACTGGAACAGACCCCCATCTGATGAGTTGCAT...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTCTACAGCACTTAACTaGAAGGGGAGGGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEESTALN*KGRVLH
Trigger: GTGGAGGACCCTCCCCTTCCAGTTAAGTGCTGTAGA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTCAAAAGCCTCACACTaGTCCTGTTCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSKASH*SCSGSG
Trigger: CCCTGATCCTGAACAGGACCAGTGTGAGGCTTTTGA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGTCTTGAGGTCAACTaGATTCTCTTCCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESCLEVN*ILFPRA
Trigger: AGCTCTGGGGAAGAGAATCCAGTTGACCTCAAGACA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGGAGCGTCTGAATGTTaGTCCTCAGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFGASEC*SSASGV
Trigger: AACTCCAGAAGCTGAGGACCAACATTCAGACGCTCC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCCAGAAAACAAAGCATaGATCCTCCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESPENKA*ILLEGP
Trigger: AGGACCTTCAAGGAGGATTCATGCTTTGTTTTCTGG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATATGCCTTCTTCCTCATaGAAGGTTCGAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNMPSSS*KVRDRK
Trigger: CTTCCTGTCTCGAACCTTTCATGAGGAAGAAGGCAT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTTCCTCTGCTCCTGTTaGATTTTCTCTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFFLCSC*IFSVSC
Trigger: GCAGCTGACAGAGAAAATTCAACAGGAGCAGAGGAA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCTTTCTGAGCTGTCTTaGGGTCAACTGGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESLSELS*GQLDSL
Trigger: AAGAGAATCCAGTTGACCTCAAGACAGCTCAGAAAG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATTTGCAGGAGCGTCTaGATGTTGGTCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHICRSV*MLVLSF
Trigger: GAAGCTGAGGACCAACATTCAGACGCTCCTGCAAAT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGCAGTCTCTTGGTGTaGTATCCTTGGGCATATCCT +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSSLLV*YPWAYP
Trigger: AGGATATGCCCAAGGATAGCACACCAAGAGACTGCT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAGCAGTCTCTTGGTGTaGTATCCTTGGGCATATCCT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSSLLV*YPWAYP
Trigger: AGGATATGCCCAAGGATAGCACACCAAGAGACTGCT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAAATATCTATCCGGGTaGCATCAGCATCCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFKYLSG*HQHPSH
Trigger: ATGCGAGGGATGCTGATGCCACCCGGATAGATATTT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCACTCTGGTGTTCGTTTaGCTGATTTCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESTLVFV*LISQTG
Trigger: TCCAGTTTGGGAAATCAGCCAAACGAACACCAGAGT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAGGTGGCGGTACTCCTTaGCATCAGCAAAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTGGGTP*HQQSLA
Trigger: AGCAAGACTTTGCTGATGCCAAGGAGTACCGCCACC...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATATGCAACTCATCAGATaGGGGTCTGTTCCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNMQLIR*GSVPVS
Trigger: GCTAACTGGAACAGACCCCCATCTGATGAGTTGCAT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGGATTGTACCAGAGGTaGGGGTTGGGGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFGLYQR*GLGYSF
Trigger: AAAACTATACCCCAACCCCCACCTCTGGTACAATCC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGGAGTGTTCATGATTTaGGGAGTTTCGACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLGVFMI*GVSTFQ
Trigger: TTGGAAGGTCGAAACTCCCCAAATCATGAACACTCC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCACCTAGCTCCTTCTTaGATATGGGAAAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLHLAPS*IWENSE
Trigger: CTCTGAGTTTTCCCATATCCAAGAAGGAGCTAGGTG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCATGAATCCTCCTTaGAGGTCCTCTCGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEESMNPP*RSSRFS
Trigger: TGAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTGGTGTTCGTTTGGCTaGTTTCCCAAACTGGATCAC +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEWCSFG*FPKLDH
Trigger: GTGATCCAGTTTGGGAAATCAGCCAAACGAACACCA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGATGCCTTCTTCCTCATaGAAGGTTCGAGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEMPSSS*KVRDRK
Trigger: CTTCCTGTCTCGAACCTTTCATGAGGAAGAAGGCAT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGAGAATACTTGTAGATaGGCTCTGTCTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESENTCR*ALSQWQ
Trigger: TTGCCATTGAGACAGAGCTCATCTACAAGTATTCTC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTGCACCTTGTGCCCGTaGATAAAAATCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEECTLCP*IKILIR
Trigger: TCGGATGAGGATTTTTATTCACGGGCACAAGGTGCA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCTTTCTCATACATTTTaGTCAGGCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESLSHTF*SGGYSC
Trigger: ACAACTGTAGCCGCCTGATCAAAATGTATGAGAAAG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTCAGGACTCCGCTTATaGTCACAAATCACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSGLRL*SQITSE
Trigger: TTCACTGGTGATTTGTGATCATAAGCGGAGTCCTGA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAGCCCTTTATCTTTCTaGGCTGTCTTGAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSPLSF*AVLRST
Trigger: AGTTGACCTCAAGACAGCTCAGAAAGATAAAGGGCT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGAAAACTCAGAGGCATaGAATAATGTAGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLENSEA*NNVGSS
Trigger: GGAACTGCCTACATTATTTCATGCCTCTGAGTTTTC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGAAAACTCAGAGGCATaGAATAATGTAGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESENSEA*NNVGSS
Trigger: GGAACTGCCTACATTATTTCATGCCTCTGAGTTTTC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATCGACTTCATATTGCTTaGAGCACTCTTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNRLHIA*STLSEG
Trigger: TCCCTCTGAAAGAGTGCTTCAAGCAATATGAAGTCG...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCGACTTCATATTGCTTaGAGCACTCTTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFRLHIA*STLSEG
Trigger: TCCCTCTGAAAGAGTGCTTCAAGCAATATGAAGTCG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCTTAGGTTCTTTGAGTaGTTGCTGCTTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHLRFFE*LLLGVS
Trigger: AGAGACGCCAAGCAGCAAGCACTCAAAGAACCTAAG...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCTCTTGCGTTTGAAATaGAACTCATCAGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFLLRLK*NSSDGG
Trigger: ACCCCCATCTGATGAGTTGCATTTCAAACGCAAGAG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCCCAGAGGAATCTTCTaGTTCAGTTCAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFPRGIF*FSSKAS
Trigger: TGAGGCTTTTGAACTGAAGCAGAAGATTCCTCTGGG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACAAATATCTATCCGGGTaGCATCAGCATCCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHKYLSG*HQHPSH
Trigger: ATGCGAGGGATGCTGATGCCACCCGGATAGATATTT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGGGATTGTACCAGAGGTaGGGGTTGGGGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEGLYQR*GLGYSF
Trigger: AAAACTATACCCCAACCCCCACCTCTGGTACAATCC...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCAGTTCCAGAGAATTTaGACCAAGAGGTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFQFQRI*TKRSMV
Trigger: GACCATTGACCTCTTGGTCCAAATTCTCTGGAACTG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCACCTAGCTCCTTCTTaGATATGGGAAAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFHLAPS*IWENSE
Trigger: CTCTGAGTTTTCCCATATCCAAGAAGGAGCTAGGTG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAAGCATGAATCCTCCTTaGAGGTCCTCTCGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTSMNPP*RSSRFS
Trigger: TGAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCT...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATGAGAATACTTGTAGATaGGCTCTGTCTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNENTCR*ALSQWQ
Trigger: TTGCCATTGAGACAGAGCTCATCTACAAGTATTCTC...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTCAGGACTCCGCTTATaGTCACAAATCACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEESGLRL*SQITSE
Trigger: TTCACTGGTGATTTGTGATCATAAGCGGAGTCCTGA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCTTTCTGAGCTGTCTTaGGGTCAACTGGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEELSELS*GQLDSL
Trigger: AAGAGAATCCAGTTGACCTCAAGACAGCTCAGAAAG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGCATCAGCAAAGTCTTaGTTGTTATGTGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFASAKS*LLCVGS
Trigger: GGAACCTACACATAACAAGCAAGACTTTGCTGATGC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCCAGAGGAATCTTCTaGTTCAGTTCAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPRGIF*FSSKAS
Trigger: TGAGGCTTTTGAACTGAAGCAGAAGATTCCTCTGGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCAGTCCGACTTCATATTaGTTGAAGCACTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSPTSY*LKHSFR
Trigger: TCTGAAAGAGTGCTTCAAGCAATATGAAGTCGGACT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGACTCTGGTGTTCGTTTaGCTGATTTCCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEETLVFV*LISQTG
Trigger: TCCAGTTTGGGAAATCAGCCAAACGAACACCAGAGT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCATAAACATGCCATCATaGTCACGGTGTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESINMPS*SRCSML
Trigger: CAACATTGAACACCGTGACCATGATGGCATGTTTAT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTATTTGGAGAAAGGTCTaGAAGTCACTTCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFIWRKV*KSLPRV
Trigger: TACCCTTGGAAGTGACTTCCAGACCTTTCTCCAAAT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACATGTCTTGAGGTCAACTaGATTCTCTTCCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTCLEVN*ILFPRA
Trigger: AGCTCTGGGGAAGAGAATCCAGTTGACCTCAAGACA...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTATTCTTCTGAATTCATaGCACCTAGCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFILLNS*HLAPSW
Trigger: CCAAGAAGGAGCTAGGTGCCATGAATTCAGAAGAAT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCAGAAAACAAAGCATaGATCCTCCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTPENKA*ILLEGP
Trigger: AGGACCTTCAAGGAGGATTCATGCTTTGTTTTCTGG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATCACGGTGTTCAATGTTaGCACCAAAAACAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNHGVQC*HQKQKS
Trigger: TGACTTTTGTTTTTGGTGTCAACATTGAACACCGTG...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCTTTCTCATACATTTTaGTCAGGCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEELSHTF*SGGYSC
Trigger: ACAACTGTAGCCGCCTGATCAAAATGTATGAGAAAG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACGCATCAGCAAAGTCTTaGTTGTTATGTGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHASAKS*LLCVGS
Trigger: GGAACCTACACATAACAAGCAAGACTTTGCTGATGC...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACTCTTGCGTTTGAAATaGAACTCATCAGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTLLRLK*NSSDGG
Trigger: ACCCCCATCTGATGAGTTGCATTTCAAACGCAAGAG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGTCCGACTTCATATTaGTTGAAGCACTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSPTSY*LKHSFR
Trigger: TCTGAAAGAGTGCTTCAAGCAATATGAAGTCGGACT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGGCTGATTTCCCAAACTaGATCACATTGATGACATCG +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEADFPN*ITLMTS
Trigger: CGATGTCATCAATGTGATCCAGTTTGGGAAATCAGC...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGAAATCTTTGTAAACTaGGTCATCACTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESEIFVN*VITSSS
Trigger: TGAGGAAGAAGTGATGACCCAGTTTACAAAGATTTC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTATGAGCAGGATATTTaGAGAAAGGTCTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFYEQDI*RKVWKS
Trigger: TGACTTCCAGACCTTTCTCCAAATATCCTGCTCATA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGATGATAGAAGACCTTTaGAGCTGTCTGAATGGAGCA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEMIEDL*SCLNGA
Trigger: TGCTCCATTCAGACAGCTCCAAAGGTCTTCTATCAT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACAGTTCCAGAGAATTTaGACCAAGAGGTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTQFQRI*TKRSMV
Trigger: GACCATTGACCTCTTGGTCCAAATTCTCTGGAACTG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGATTCTTCTGAATTCATaGCACCTAGCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEILLNS*HLAPSW
Trigger: CCAAGAAGGAGCTAGGTGCCATGAATTCAGAAGAAT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR TCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCACGGTGTTCAATGTTaGCACCAAAAACAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEHGVQC*HQKQKS
Trigger: TGACTTTTGTTTTTGGTGTCAACATTGAACACCGTG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR GCA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCAACTTAATAATTCCATaGTGGGCAATTTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: HMNETSLHRDCGSFEEESNLIIP*WAISMS
Trigger: GGACATAGAAATTGCCCAGCATGGAATTATTAAGTT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGAAATCTTTGTAAACTaGGTCATCACTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFEIFVN*VITSSS
Trigger: TGAGGAAGAAGTGATGACCCAGTTTACAAAGATTTC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTAATAATTCCATGCTaGGCAATTTCTATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: MKLPSTETVEVLRRRADLLIIPC*AISMSF
Trigger: GAAGGACATAGAAATTGCCCAGCATGGAATTATTAA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACAGGTCGCTTTGTGAATaGATAGGCTTGATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHRSLCE*IGLIFL
Trigger: CAAGAAAATCAAGCCTATCCATTCACAAAGCGACCT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGGTCGCTTTGTGAATaGATAGGCTTGATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEERSLCE*IGLIFL
Trigger: CAAGAAAATCAAGCCTATCCATTCACAAAGCGACCT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAATTTGGAGAAAGGTCTaGAAGTCACTTCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTIWRKV*KSLPRV
Trigger: TACCCTTGGAAGTGACTTCCAGACCTTTCTCCAAAT...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR GCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAACTTAATAATTCCATaGTGGGCAATTTCTATGTCC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFNLIIP*WAISMS
Trigger: GGACATAGAAATTGCCCAGCATGGAATTATTAAGTT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAATAAACATGCCATCATaGTCACGGTGTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTINMPS*SRCSML
Trigger: CAACATTGAACACCGTGACCATGATGGCATGTTTAT...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CCA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTTAATAATTCCATGCTaGGCAATTTCTATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLPSTETVEVLRRRADLFLIIPC*AISMSF
Trigger: GAAGGACATAGAAATTGCCCAGCATGGAATTATTAA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCAAACAAAAATGCATaGGTAGTTGAATTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPNKNA*VVEFVC
Trigger: ACACACAAATTCAACTACCCATGCATTTTTGTTTGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CCA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCAAACAAAAATGCATaGGTAGTTGAATTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTPNKNA*VVEFVC
Trigger: ACACACAAATTCAACTACCCATGCATTTTTGTTTGG...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCCAGGTGCTCCCCCATaGCCCGCAGAAGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESPGAPP*PAEGGG
Trigger: ACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 90 bp GGCAATTTCTATGTCCTTCCAGTACTGTGCCAGGTGCTCCCCCATTaGCCGCAGAAGGTGGCGGTACTCCTTGGCATCAGCAAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GNFYVLPVLCQVLPH*PQKVAVLLGISKVL
Trigger: CAAGACTTTGCTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAGAAATTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 90 bp ATTCCATGCTGGGCAATTTCTATGTCCTTCCAGTACTGTGCCAGGTaGTCCCCCATTGCCCGCAGAAGGTGGCGGTACTCCTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: IPCWAISMSFQYCAR*SPIARRRWRYSLAS
Trigger: TGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAGAAATTGCCCAGCATGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 90 bp CAGAAGCATTCAGAGGTGGAGGTCTGCTGCAGTGCCAAAGCCTGCTaGACCACAGTGTCCTCCTCCCCCTTTCTATCCTCTTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: QKHSEVEVCCSAKAC*TTVSSSPFLSSCCS
Trigger: TGAACAGCAAGAGGATAGAAAGGGGGAGGAGGACACTGTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCCACCTCTGAATGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCAGGTGCTCCCCCATaGCCCGCAGAAGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPGAPP*PAEGGG
Trigger: ACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 90 bp ATCGATATACAGCACAGCAGCGTAGGCACAGAAGGAGTGCCGCTCTaGCTTCACGCCTTCTTGGGAGATCTCTGCCATCCGGATATCTTT +
Preference number: 5 (lower is better)
Translates to: IDIQHSSVGTEGVPL*LHAFLGDLCHPDIF
Trigger: AAAGATATCCGGATGGCAGAGATCTCCCAAGAAGGCGTGAAGCCAGAGCGGCACTCCTTCTGTGCCTACGCTGCTGTGCTGTATATCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 90 bp CTTAATAATTCCATGCTGGGCAATTTCTATGTCCTTCCAGTACTGTaGCAGGTGCTCCCCCATTGCCCGCAGAAGGTGGCGGTACTCCTT +
Preference number: 5 (lower is better)
Translates to: LNNSMLGNFYVLPVL*QVLPHCPQKVAVLL
Trigger: AAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAGAAATTGCCCAGCATGGAATTATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCAGCAGCAGAGCTTTTaGGTCTGCACCTTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESQQQSF*VCTLCP
Trigger: CGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCTG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTCTAATGTACGGGCTTaGCTCTCTGCTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLSNVRA*LSASRA
Trigger: GGCCCGGGAAGCAGAGAGCAAAGCCCGTACATTAGA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTCTAATGTACGGGCTTaGCTCTCTGCTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSNVRA*LSASRA
Trigger: GGCCCGGGAAGCAGAGAGCAAAGCCCGTACATTAGA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGTAAACCTGCCCCGCTaGCACATCCTCTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLVNLPR*HILFLL
Trigger: CAGGAGGAAGAGGATGTGCAAGCGGGGCAGGTTTAC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCCACCCAGCAGTCTCTaGGTGTGCTATCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESPPSSL*VCYPWA
Trigger: TGCCCAAGGATAGCACACCAAGAGACTGCTGGGTGG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCCACCCAGCAGTCTCTaGGTGTGCTATCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLPPSSL*VCYPWA
Trigger: TGCCCAAGGATAGCACACCAAGAGACTGCTGGGTGG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp GTCTGCCTTCTTCACCTCTTGTTCTGCCCTGGTCTTAAAACGGTGTaGCGTGAAGGTGTACTTCCTGGGTTTATACAGGCAGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: VCLLHLLFCPGLKTV*REGVLPGFIQAAAE
Trigger: CTCTGCTGCTGCCTGTATAAACCCAGGAAGTACACCTTCACGTCACACCGTTTTAAGACCAGGGCAGAACAAGAGGTGAAGAAGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp CACACTGGTCCTGTTCAGGATCAGGGTTCATGGAACAAACCCAGTTaGTGGGGTAACCTTCTTCTACAGCACTTAACTGGAAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: HTGPVQDQGSWNKPS*WGNLLLQHLTGRGG
Trigger: CCCTCCCCTTCCAGTTAAGTGCTGTAGAAGAAGGTTACCCCATCAACTGGGTTTGTTCCATGAACCCTGATCCTGAACAGGACCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 90 bp CCACAGTGTCCTCCTCCCCCTTTCTATCCTCTTGCTGTTCATCAGTaGTCTGGTACTCTGGAGATGGCTTCACTAGCCATACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: PQCPPPPFYPLAVHQ*SGTLEMASLAIHFH
Trigger: GTGAAAATGTATGGCTAGTGAAGCCATCTCCAGAGTACCAGAGCACTGATGAACAGCAAGAGGATAGAAAGGGGGAGGAGGACACTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 90 bp TGTAGGCAGTTCCAGAGAATTTGGACCAAGAGGTCAATGGTCTTGTaGTTGGCTGTTGAGGCAGTAGTGTCGGGTTCAGTGCAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: CRQFQRIWTKRSMVL*LAVEAVVSGSVQKH
Trigger: ATGCTTCTGCACTGAACCCGACACTACTGCCTCAACAGCCAACCACAAGACCATTGACCTCTTGGTCCAAATTCTCTGGAACTGCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCAGCAGCAGAGCTTTTaGGTCTGCACCTTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHQQQSF*VCTLCP
Trigger: CGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCTG...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGGTGGCGGTACTCCTaGGCATCAGCAAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNRWRYS*ASAKSC
Trigger: GCAAGACTTTGCTGATGCCAAGGAGTACCGCCACCT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGGTTGGGGTATAGTTTaGACCAGGAGGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLGWGIV*TRRLTD
Trigger: GTCAGTGAGCCTCCTGGTCAAAACTATACCCCAACC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGGTTGGGGTATAGTTTaGACCAGGAGGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESGWGIV*TRRLTD
Trigger: GTCAGTGAGCCTCCTGGTCAAAACTATACCCCAACC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCAAGGGTTGTTGGACTaGGGGACTACAGATGGTGAC +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESQGLLD*GTTDGD
Trigger: GTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp TTATACAGGCAGCAGCAGAGCTTTTTGGTCTGCACCTTGTGCCCGTaGATAAAAATCCTCATCCGAGGATCGATATACAGCACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: LYRQQQSFLVCTLCP*IKILIRGSIYSTAA
Trigger: CGCTGCTGTGCTGTATATCGATCCTCGGATGAGGATTTTTATTCACGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCTGCCTGTATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 90 bp GCATTGAGCCTGATTTTAGTCCATTCCCGTACCGCCCAATCTGTGTaGACTCTGGTGTTCGTTTGGCTGATTTCCCAAACTGGATCACAT +
Preference number: 5 (lower is better)
Translates to: ALSLILVHSRTAQSV*TLVFVWLISQTGSH
Trigger: ATGTGATCCAGTTTGGGAAATCAGCCAAACGAACACCAGAGTCCACACAGATTGGGCGGTACGGGAATGGACTAAAATCAGGCTCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGACTCTGGTGTTCGTTaGGCTGATTTCCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESDSGVR*ADFPNW
Trigger: CCAGTTTGGGAAATCAGCCAAACGAACACCAGAGTC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCAGTTCGGGTTCTCCGTaGTCCGTGAGTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLSSGSP*SVSLRL
Trigger: CAATCTCAAACTCACGGACAACGGAGAACCCGAACT...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCAGGTTCTTTGAGTGCTaGCTGCTTGGCGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLRFFEC*LLGVSD
Trigger: ATCAGAGACGCCAAGCAGCAAGCACTCAAAGAACCT...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCAGGTTCTTTGAGTGCTaGCTGCTTGGCGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESRFFEC*LLGVSD
Trigger: ATCAGAGACGCCAAGCAGCAAGCACTCAAAGAACCT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGGTGGCGGTACTCCTaGGCATCAGCAAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEERWRYS*ASAKSC
Trigger: GCAAGACTTTGCTGATGCCAAGGAGTACCGCCACCT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTCAATGGTCTTGTGGTaGGCTGTTGAGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLSMVLW*AVEAVV
Trigger: CACTACTGCCTCAACAGCCAACCACAAGACCATTGA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp ATTCCCGTACCGCCCAATCTGTGTGGACTCTGGTGTTCGTTTGGCTaGTTTCCCAAACTGGATCACATTGATGACATCGTTTGGATCCAT +
Preference number: 5 (lower is better)
Translates to: IPVPPNLCGLWCSFG*FPKLDHIDDIVWIH
Trigger: ATGGATCCAAACGATGTCATCAATGTGATCCAGTTTGGGAAATCAGCCAAACGAACACCAGAGTCCACACAGATTGGGCGGTACGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 90 bp TTTTGGATTGGTGCAGATGATAGAAGACCTTTGGAGCTGTCTGAATaGAGCATGCCTGGACTGAGGTCTTCGTCGGGCATTCGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: FWIGADDRRPLELSE*SMPGLRSSSGIRFY
Trigger: GTAAAAACGAATGCCCGACGAAGACCTCAGTCCAGGCATGCTCCATTCAGACAGCTCCAAAGGTCTTCTATCATCTGCACCAATCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGCCTTCTTCACCTCTaGTTCTGCCCTGGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESCLLHL*FCPGLK
Trigger: TTTAAGACCAGGGCAGAACAAGAGGTGAAGAAGGCA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCTTCCTCTGCTCCTGTaGAATTTTCTCTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLLPLLL*NFLCQL
Trigger: CAGCTGACAGAGAAAATTCAACAGGAGCAGAGGAAG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCCTTGGTGTGCTATCCTaGGGCATATCCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESLGVLS*GISSNL
Trigger: CAAGTTTGAGGATATGCCCAAGGATAGCACACCAAG...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCTTGGTGTGCTATCCTaGGGCATATCCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLLGVLS*GISSNL
Trigger: CAAGTTTGAGGATATGCCCAAGGATAGCACACCAAG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTCCCCTTTCTATCCTCTaGCTGTTCATCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFPLSIL*LFISAL
Trigger: CAGAGCACTGATGAACAGCAAGAGGATAGAAAGGGG...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAAGAGGTCAATGGTCTaGTGGTTGGCTGTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFKRSMV*WLAVEA
Trigger: TGCCTCAACAGCCAACCACAAGACCATTGACCTCTT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGCAGTTCCAGAGAATTaGGACCAAGAGGTCAATGGT +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLAVPEN*DQEVNG
Trigger: ACCATTGACCTCTTGGTCCAAATTCTCTGGAACTGC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCGCACCTAGCTCCTTCTaGGATATGGGAAAACTCAGA +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLAPSSF*DMGKLR
Trigger: TCTGAGTTTTCCCATATCCAAGAAGGAGCTAGGTGC...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp TTCATCAGAGACCTCAGGACTCCGCTTATGATCACAAATCACCAGTaGAGGATTAACAGGTACATATGGCATCTCGGCCACTGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: FIRDLRTPLMITNHQ*RINRYIWHLGHWSV
Trigger: AACACTCCAGTGGCCGAGATGCCATATGTACCTGTTAATCCTTCACTGGTGATTTGTGATCATAAGCGGAGTCCTGAGGTCTCTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAAGCATGAATCCTCCTaGAAGGTCCTCTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFKHESS*KVLSLF
Trigger: GAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCTT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCCAAACTGGATCACATaGATGACATCGTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLPNWIT*MTSFGS
Trigger: GGATCCAAACGATGTCATCAATGTGATCCAGTTTGG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCCCTTCCCAATACGCATaGAGCCTGATTTTAGTCCAT +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLPSQYA*SLILVH
Trigger: ATGGACTAAAATCAGGCTCAATGCGTATTGGGAAGG...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGTTCGGGTTCTCCGTaGTCCGTGAGTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEESSGSP*SVSLRL
Trigger: CAATCTCAAACTCACGGACAACGGAGAACCCGAACT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTCTCTGATCCTTTTCTaGACATCAGCTTCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSLILF*TSASLR
Trigger: CCGAAGAGAAGCTGATGTCAAGAAAAGGATCAGAGA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTCAGCAAAGTCTTGCTaGTTATGTGTAGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESSAKSC*LCVGSR
Trigger: CCTGGAACCTACACATAACAAGCAAGACTTTGCTGA...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCATAGGCTTGATTTTCTaGAGGGCCTTAAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESIGLIF*RALSFL
Trigger: GAGGAAGCTTAAGGCCCTCAAGAAAATCAAGCCTAT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATAGCACAGCCTCTGTTTaGTCTACCAGAAAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSTASV*STRKGG
Trigger: ACCTCCTTTTCTGGTAGACAAAACAGAGGCTGTGCT...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCCCTTTCTATCCTCTaGCTGTTCATCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPLSIL*LFISAL
Trigger: CAGAGCACTGATGAACAGCAAGAGGATAGAAAGGGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACAAGAGGTCAATGGTCTaGTGGTTGGCTGTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHKRSMV*WLAVEA
Trigger: TGCCTCAACAGCCAACCACAAGACCATTGACCTCTT...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS TCA 90 bp CAAGTAGGCAAAGGGACTATCACCTCATCAATGCCTTCTTCCTCATaGAAGGTTCGAGACAGGAAGAGGCAACTCATGGTGTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QVGKGTITSSMPSSS*KVRDRKRQLMVFSF
Trigger: GAAAGAAAACACCATGAGTTGCCTCTTCCTGTCTCGAACCTTTCATGAGGAAGAAGGCATTGATGAGGTGATAGTCCCTTTGCCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAAGCATGAATCCTCCTaGAAGGTCCTCTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEKHESS*KVLSLF
Trigger: GAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCTT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTCCGTGAGTTTGAGATaGAAAATGACGACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSVSLR*KMTTRV
Trigger: AACCCTGGTCGTCATTTTCAATCTCAAACTCACGGA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCGGATATCTTTTGGATTaGAGGTTACGTCTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESGYLLD*RLRLVR
Trigger: CCGAACTAGACGTAACCTCAAATCCAAAAGATATCC...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTGCCTTCTTCACCTCTaGTTCTGCCCTGGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEECLLHL*FCPGLK
Trigger: TTTAAGACCAGGGCAGAACAAGAGGTGAAGAAGGCA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACATGAATTCTCTGATCCTTTTCTaGACATCAGCTTCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: NSGRKIQRTRVPLPKHMNSLILF*TSASLR
Trigger: CCGAAGAGAAGCTGATGTCAAGAAAAGGATCAGAGA...ATTCATGTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGGCATCAGCAAAGTCTaGCTTGTTATGTGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFGISKV*LVMCRF
Trigger: GAACCTACACATAACAAGCAAGACTTTGCTGATGCC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCTTCCTCTGCTCCTGTaGAATTTTCTCTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHLPLLL*NFLCQL
Trigger: CAGCTGACAGAGAAAATTCAACAGGAGCAGAGGAAG...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp CACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCAAAGGAGGTTTTGGATaGGTGCAGATGATAGAAGAC +
Preference number: 5 (lower is better)
Translates to: HMNETSLHRDCGSFEEESKGGFG*VQMIED
Trigger: GTCTTCTATCATCTGCACCAATCCAAAACCTCCTTT...GCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCACAGCCTCTGTTTaGTCTACCAGAAAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEESTASV*STRKGG
Trigger: ACCTCCTTTTCTGGTAGACAAAACAGAGGCTGTGCT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp GCGTTTGAAATGCAACTCATCAGATGGGGGTCTGTTCCAGTTAGCTaGAAGGTAGCCAAACTCATCCCAGAACTTAATAATTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: AFEMQLIRWGSVPVS*KVAKLIPELNNSML
Trigger: CAGCATGGAATTATTAAGTTCTGGGATGAGTTTGGCTACCTTTCAGCTAACTGGAACAGACCCCCATCTGATGAGTTGCATTTCAAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp TCATGGCACCTAGCTCCTTCTTGGATATGGGAAAACTCAGAGGCATaGAATAATGTAGGCAGTTCCAGAGAATTTGGACCAAGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: SWHLAPSWIWENSEA*NNVGSSREFGPRGQ
Trigger: TTGACCTCTTGGTCCAAATTCTCTGGAACTGCCTACATTATTTCATGCCTCTGAGTTTTCCCATATCCAAGAAGGAGCTAGGTGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp TTTGGTAGGAGCGGCAGAGATTCTGGAGTCCGACTTCATATTGCTTaGAGCACTCTTTCAGAGGGAGAGACAGTAATTCTTCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: FGRSGRDSGVRLHIA*STLSEGETVILLNS
Trigger: TGAATTCAGAAGAATTACTGTCTCTCCCTCTGAAAGAGTGCTTCAAGCAATATGAAGTCGGACTCCAGAATCTCTGCCGCTCCTACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGCCAAACTGGATCACATaGATGACATCGTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEEPNWIT*MTSFGS
Trigger: GGATCCAAACGATGTCATCAATGTGATCCAGTTTGG...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACCCTTCCCAATACGCATaGAGCCTGATTTTAGTCCAT +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHPSQYA*SLILVH
Trigger: ATGGACTAAAATCAGGCTCAATGCGTATTGGGAAGG...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACTCCGTGAGTTTGAGATaGAAAATGACGACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHSVSLR*KMTTRV
Trigger: AACCCTGGTCGTCATTTTCAATCTCAAACTCACGGA...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTGGATATCTTTTGGATTaGAGGTTACGTCTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFGYLLD*RLRLVR
Trigger: CCGAACTAGACGTAACCTCAAATCCAAAAGATATCC...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTACTTTCTCATACATTTaGATCAGGCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFTFSYI*IRRLQL
Trigger: CAACTGTAGCCGCCTGATCAAAATGTATGAGAAAGT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACGGCATCAGCAAAGTCTaGCTTGTTATGTGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHGISKV*LVMCRF
Trigger: GAACCTACACATAACAAGCAAGACTTTGCTGATGCC...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTATAGCCCTCTTGCGTTaGAAATGCAACTCATCAGAT +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFIALLR*KCNSSD
Trigger: ATCTGATGAGTTGCATTTCAAACGCAAGAGGGCTAT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTAAAGGAGGTTTTGGATaGGTGCAGATGATAGAAGAC +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFKGGFG*VQMIED
Trigger: GTCTTCTATCATCTGCACCAATCCAAAACCTCCTTT...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAGCAGTTCCAGAGAATTaGGACCAAGAGGTCAATGGT +
Preference number: 5 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTAVPEN*DQEVNG
Trigger: ACCATTGACCTCTTGGTCCAAATTCTCTGGAACTGC...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACAGCACCTAGCTCCTTCTaGGATATGGGAAAACTCAGA +
Preference number: 5 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTAPSSF*DMGKLR
Trigger: TCTGAGTTTTCCCATATCCAAGAAGGAGCTAGGTGC...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTTTTCACGGTGTTCAATGTaGACACCAAAAACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KLPSTETVEVLRRRADLFSRCSM*TPKTKV
Trigger: GACTTTTGTTTTTGGTGTCAACATTGAACACCGTGA...AAAGAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGACTTTCTCATACATTTaGATCAGGCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEETFSYI*IRRLQL
Trigger: CAACTGTAGCCGCCTGATCAAAATGTATGAGAAAGT...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp ATTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACATCAGCAAAGTCTTGCTaGTTATGTGTAGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: IYKFREEDSKDQSPPPKTSAKSC*LCVGSR
Trigger: CCTGGAACCTACACATAACAAGCAAGACTTTGCTGA...TGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp ATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGAGCTGATCTCTGTCTGAGAGCTCACTaGCTTGAATCTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: MKLPSTETVEVLRRRADLCLRAH*LESFLF
Trigger: AAAAAGAAAAGATTCAAGCAAGTGAGCTCTCAGACA...GAGATCAGCTCTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 90 bp CATCGTTTGGATCCATTCCGACTCCATTATCCAGAAAACAAAGCATaGATCCTCCTTGAAGGTCCTCTCGCTTTTCAGCGTAAATATCTA +
Preference number: 5 (lower is better)
Translates to: HRLDPFRLHYPENKA*ILLEGPLAFQRKYL
Trigger: TAGATATTTACGCTGAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCTTTGTTTTCTGGATAATGGAGTCGGAATGGATCCAAACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS-3UTR CAA 90 bp TTTATAAATTCAGGGAGGAAGATTCAAAGGACCAGAGTCCCCCTCCCAAAACACTCACGGTGTTCAATGTaGACACCAAAAACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: FINSGRKIQRTRVPLPKHSRCSM*TPKTKV
Trigger: GACTTTTGTTTTTGGTGTCAACATTGAACACCGTGA...GTGTTTTGGGAGGGGGACTCTGGTCCTTTGAATCTTCCTCCCTGAATTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000053896.8
CDS-3UTR CAA 90 bp AAACACATGAATGAAACTTCCCTCCACAGAGACTGTGGAAGTTTTGAGGAGGAGTGTCTGAGAGCTCACTaGCTTGAATCTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: KHMNETSLHRDCGSFEEECLRAH*LESFLF
Trigger: AAAAAGAAAAGATTCAAGCAAGTGAGCTCTCAGACA...CTCCTCCTCAAAACTTCCACAGTCTCTGTGGAGGGAAGTTTCATTCATGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp TATGTCCTTCCAGTACTGTGCCAGGTGCTCCCCCATTaGCCGCAGAAGGTGGCGGTACTCCTTGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: YVLPVLCQVLPH*PQKVAVLLGIS
Trigger: GCTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp AGTGCAGAAGCATTCAGAGGTGGAGGTCTGCTGCAGTaGCAAAGCCTGCTGGACCACAGTGTCCTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: SAEAFRGGGLLQ*QSLLDHSVLLP
Trigger: GGGGAGGAGGACACTGTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCCACCTCTGAATGCTTCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CTATGTCCTTCCAGTACTGTGCCAGGTGCTCCCCCATaGCCCGCAGAAGGTGGCGGTACTCCTTGGCATCAG +
Preference number: 6 (lower is better)
Translates to: LCPSSTVPGAPP*PAEGGGTPWHQ
Trigger: CTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp TGGGCAATTTCTATGTCCTTCCAGTACTGTGCCAGGTaGTCCCCCATTGCCCGCAGAAGGTGGCGGTACTCC +
Preference number: 6 (lower is better)
Translates to: WAISMSFQYCAR*SPIARRRWRYS
Trigger: GGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAGAAATTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp CATTCAGAGGTGGAGGTCTGCTGCAGTGCCAAAGCCTaGTGGACCACAGTGTCCTCCTCCCCCTTTCTATCC +
Preference number: 6 (lower is better)
Translates to: HSEVEVCCSAKA*WTTVSSSPFLS
Trigger: GGATAGAAAGGGGGAGGAGGACACTGTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCCACCTCTGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp GGTTCAGTGCAGAAGCATTCAGAGGTGGAGGTCTGCTaGAGTGCCAAAGCCTGCTGGACCACAGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSVQKHSEVEVC*SAKACWTTVSS
Trigger: GGAGGACACTGTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCCACCTCTGAATGCTTCTGCACTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp TCGGGTTCAGTGCAGAAGCATTCAGAGGTGGAGGTCTaGTGCAGTGCCAAAGCCTGCTGGACCACAGTGTCC +
Preference number: 6 (lower is better)
Translates to: SGSVQKHSEVEV*CSAKACWTTVS
Trigger: GGACACTGTGGTCCAGCAGGCTTTGGCACTGCAGCAGACCTCCACCTCTGAATGCTTCTGCACTGAACCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp TCCCGGGTGATGTCTCCACCCATGTGTATTTCTAATGTACGGGCTTaGCTCTCTGCTTCCCGGGCCTTCTCTTCCGCGAGCTGTGCTACC +
Preference number: 6 (lower is better)
Translates to: SRVMSPPMCISNVRA*LSASRAFSSASCAT
Trigger: GGTAGCACAGCTCGCGGAAGAGAAGGCCCGGGAAGCAGAGAGCAAAGCCCGTACATTAGAAATACACATGGGTGGAGACATCACCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp TGTGCCAGGTGCTCCCCCATTGCCCGCAGAAGGTGGCGGTACTCCTaGGCATCAGCAAAGTCTTGCTTGTTATGTGTAGGTTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: CARCSPIARRRWRYS*ASAKSCLLCVGSRT
Trigger: GGTCCTGGAACCTACACATAACAAGCAAGACTTTGCTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp GGGCAATTTCTATGTCCTTCCAGTACTGTGCCAGGTGCTCCCCCATaGCCCGCAGAAGGTGGCGGTACTCCTTGGCATCAGCAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: GQFLCPSSTVPGAPP*PAEGGGTPWHQQSL
Trigger: AAGACTTTGCTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCACCTGGCACAGTACTGGAAGGACATAGAAATTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp GCTTCTCTTCGGAGAGTGATGGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAGTCCCGGGTGATGTCT +
Preference number: 6 (lower is better)
Translates to: ASLRRVMAVFWT*RNITLESRVMS
Trigger: AGACATCACCCGGGACTCCAGGGTGATGTTGCGTCAGGTCCAGAATACAGCCATCACTCTCCGAAGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp TCTGGACCTGACGCAACATCACCCTGGAGTCCCGGGTaGTGTCTCCACCCATGTGTATTTCTAATGTACGGG +
Preference number: 6 (lower is better)
Translates to: SGPDATSPWSPG*CLHPCVFLMYG
Trigger: CCCGTACATTAGAAATACACATGGGTGGAGACATCACCCGGGACTCCAGGGTGATGTTGCGTCAGGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp GGAGATGCGCAGGCTTTCCTCAGAGACCTTGGCTTGTaGGTCAGCACATCTTTGGTAGGAGCGGCAGAGATT +
Preference number: 6 (lower is better)
Translates to: GDAQAFLRDLGL*VSTSLVGAAEI
Trigger: AATCTCTGCCGCTCCTACCAAAGATGTGCTGACTCACAAGCCAAGGTCTCTGAGGAAAGCCTGCGCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TGCTCCCCCATTGCCCGCAGAAGGTGGCGGTACTCCTaGGCATCAGCAAAGTCTTGCTTGTTATGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: CSPIARRRWRYS*ASAKSCLLCVG
Trigger: ACCTACACATAACAAGCAAGACTTTGCTGATGCCAAGGAGTACCGCCACCTTCTGCGGGCAATGGGGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp GGTGTCTCGGGTGGCTGGAGCAGCACAGCCTCTGTTTaGTCTACCAGAAAAGGAGGTTTTGGATTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GVSGGWSSTASV*STRKGGFGLVQ
Trigger: CTGCACCAATCCAAAACCTCCTTTTCTGGTAGACAAAACAGAGGCTGTGCTGCTCCAGCCACCCGAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CTGGACCACAGTGTCCTCCTCCCCCTTTCTATCCTCTaGCTGTTCATCAGTGCTCTGGTACTCTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: LDHSVLLPLSIL*LFISALVLWRW
Trigger: CCATCTCCAGAGTACCAGAGCACTGATGAACAGCAAGAGGATAGAAAGGGGGAGGAGGACACTGTGGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp GCACAGAAGGAGTGCCGCTCTGGCTTCACGCCTTCTTaGGAGATCTCTGCCATCCGGATATCTTTTGGATTT +
Preference number: 6 (lower is better)
Translates to: AQKECRSGFTPS*EISAIRISFGF
Trigger: AAATCCAAAAGATATCCGGATGGCAGAGATCTCCCAAGAAGGCGTGAAGCCAGAGCGGCACTCCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp GCCACTGGAGTGTTCATGATTTGGGGAGTTTCGACCTTCCAAGGGTaGTTGGACTTGGGGACTACAGATGGTGACAGGGATTGTACCAGA +
Preference number: 6 (lower is better)
Translates to: ATGVFMIWGVSTFQG*LDLGTTDGDRDCTR
Trigger: TCTGGTACAATCCCTGTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTGGAAGGTCGAAACTCCCCAAATCATGAACACTCCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp ACCCAGCAGTCTCTTGGTGTGCTATCCTTGGGCATATCCTCAAACTaGACCTTCCACCATACCACATTATCACCCACCTCCACAGCTGTG +
Preference number: 6 (lower is better)
Translates to: TQQSLGVLSLGISSN*TFHHTTLSPTSTAV
Trigger: CACAGCTGTGGAGGTGGGTGATAATGTGGTATGGTGGAAGGTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAGACTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp TCCACCATACCACATTATCACCCACCTCCACAGCTGTaGCATGGCCCTTGTAGCACTCTCCCATCATACGTA +
Preference number: 6 (lower is better)
Translates to: STIPHYHPPPQL*HGPCSTLPSYV
Trigger: TACGTATGATGGGAGAGTGCTACAAGGGCCATGTCACAGCTGTGGAGGTGGGTGATAATGTGGTATGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp ACAGATGGTGACAGGGATTGTACCAGAGGTGGGGGTTaGGGTATAGTTTTGACCAGGAGGCTCACTGACTTT +
Preference number: 6 (lower is better)
Translates to: TDGDRDCTRGGG*GIVLTRRLTDF
Trigger: AAAGTCAGTGAGCCTCCTGGTCAAAACTATACCCCAACCCCCACCTCTGGTACAATCCCTGTCACCATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp TTTGGGGAGTTTCGACCTTCCAAGGGTTGTTGGACTTaGGGACTACAGATGGTGACAGGGATTGTACCAGAG +
Preference number: 6 (lower is better)
Translates to: FGEFRPSKGCWT*GLQMVTGIVPE
Trigger: CTCTGGTACAATCCCTGTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTGGAAGGTCGAAACTCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CCCTTTTCCACCCAGCAGTCTCTTGGTGTGCTATCCTaGGGCATATCCTCAAACTTGACCTTCCACCATACC +
Preference number: 6 (lower is better)
Translates to: PFSTQQSLGVLS*GISSNLTFHHT
Trigger: GGTATGGTGGAAGGTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAGACTGCTGGGTGGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp ACTGGAGTGTTCATGATTTGGGGAGTTTCGACCTTCCAAGGGTTGTaGGACTTGGGGACTACAGATGGTGACAGGGATTGTACCAGAGGT +
Preference number: 6 (lower is better)
Translates to: TGVFMIWGVSTFQGL*DLGTTDGDRDCTRG
Trigger: ACCTCTGGTACAATCCCTGTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTGGAAGGTCGAAACTCCCCAAATCATGAACACTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp AGGCAGTTCCAGAGAATTTGGACCAAGAGGTCAATGGTCTTGTGGTaGGCTGTTGAGGCAGTAGTGTCGGGTTCAGTGCAGAAGCATTCA +
Preference number: 6 (lower is better)
Translates to: RQFQRIWTKRSMVLW*AVEAVVSGSVQKHS
Trigger: TGAATGCTTCTGCACTGAACCCGACACTACTGCCTCAACAGCCAACCACAAGACCATTGACCTCTTGGTCCAAATTCTCTGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS GCA 72 bp GTGGTTGGGACTTGCATAGCCCTCTTGCGTTTGAAATaGAACTCATCAGATGGGGGTCTGTTCCAGTTAGCT +
Preference number: 6 (lower is better)
Translates to: VVGTCIALLRLK*NSSDGGLFQLA
Trigger: AGCTAACTGGAACAGACCCCCATCTGATGAGTTGCATTTCAAACGCAAGAGGGCTATGCAAGTCCCAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CTTGGGAGATCTCTGCCATCCGGATATCTTTTGGATTaGAGGTTACGTCTAGTTCGGGTTCTCCGTTGTCCG +
Preference number: 6 (lower is better)
Translates to: LGRSLPSGYLLD*RLRLVRVLRCP
Trigger: CGGACAACGGAGAACCCGAACTAGACGTAACCTCAAATCCAAAAGATATCCGGATGGCAGAGATCTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CGCCTTCTTGGGAGATCTCTGCCATCCGGATATCTTTaGGATTTGAGGTTACGTCTAGTTCGGGTTCTCCGT +
Preference number: 6 (lower is better)
Translates to: RLLGRSLPSGYL*DLRLRLVRVLR
Trigger: ACGGAGAACCCGAACTAGACGTAACCTCAAATCCAAAAGATATCCGGATGGCAGAGATCTCCCAAGAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp GTGTTCATGATTTGGGGAGTTTCGACCTTCCAAGGGTaGTTGGACTTGGGGACTACAGATGGTGACAGGGAT +
Preference number: 6 (lower is better)
Translates to: VFMIWGVSTFQG*LDLGTTDGDRD
Trigger: ATCCCTGTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTGGAAGGTCGAAACTCCCCAAATCATGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp CAGTTCCAGAGAATTTGGACCAAGAGGTCAATGGTCTaGTGGTTGGCTGTTGAGGCAGTAGTGTCGGGTTCA +
Preference number: 6 (lower is better)
Translates to: QFQRIWTKRSMV*WLAVEAVVSGS
Trigger: TGAACCCGACACTACTGCCTCAACAGCCAACCACAAGACCATTGACCTCTTGGTCCAAATTCTCTGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp CCGCCCAATCTGTGTGGACTCTGGTGTTCGTTTGGCTaGTTTCCCAAACTGGATCACATTGATGACATCGTT +
Preference number: 6 (lower is better)
Translates to: PPNLCGLWCSFG*FPKLDHIDDIV
Trigger: AACGATGTCATCAATGTGATCCAGTTTGGGAAATCAGCCAAACGAACACCAGAGTCCACACAGATTGGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp CAGCAGCAGAGCTTTTTGGTCTGCACCTTGTGCCCGTaGATAAAAATCCTCATCCGAGGATCGATATACAGC +
Preference number: 6 (lower is better)
Translates to: QQQSFLVCTLCP*IKILIRGSIYS
Trigger: GCTGTATATCGATCCTCGGATGAGGATTTTTATTCACGGGCACAAGGTGCAGACCAAAAAGCTCTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp GACCTCAGGACTCCGCTTATGATCACAAATCACCAGTaGAGGATTAACAGGTACATATGGCATCTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: DLRTPLMITNHQ*RINRYIWHLGH
Trigger: GTGGCCGAGATGCCATATGTACCTGTTAATCCTTCACTGGTGATTTGTGATCATAAGCGGAGTCCTGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp CTCTTGGTGTGCTATCCTTGGGCATATCCTCAAACTTaGCCTTCCACCATACCACATTATCACCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: LLVCYPWAYPQT*PSTIPHYHPPP
Trigger: TGGAGGTGGGTGATAATGTGGTATGGTGGAAGGTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp GGTCCTCTCGCTTTTCAGCGTAAATATCTATCCGGGTaGCATCAGCATCCCTCGCATTATCAATCAGTTCAG +
Preference number: 6 (lower is better)
Translates to: GPLAFQRKYLSG*HQHPSHYQSVQ
Trigger: CTGAACTGATTGATAATGCGAGGGATGCTGATGCCACCCGGATAGATATTTACGCTGAAAAGCGAGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp CTGATTTTAGTCCATTCCCGTACCGCCCAATCTGTGTaGACTCTGGTGTTCGTTTGGCTGATTTCCCAAACT +
Preference number: 6 (lower is better)
Translates to: LILVHSRTAQSV*TLVFVWLISQT
Trigger: AGTTTGGGAAATCAGCCAAACGAACACCAGAGTCCACACAGATTGGGCGGTACGGGAATGGACTAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TCTAGTTCGGGTTCTCCGTTGTCCGTGAGTTTGAGATaGAAAATGACGACCAGGGTTCCACTAGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SSSGSPLSVSLR*KMTTRVPLVPE
Trigger: TTCTGGGACTAGTGGAACCCTGGTCGTCATTTTCAATCTCAAACTCACGGACAACGGAGAACCCGAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp GTTACGTCTAGTTCGGGTTCTCCGTTGTCCGTGAGTTaGAGATTGAAAATGACGACCAGGGTTCCACTAGTC +
Preference number: 6 (lower is better)
Translates to: VTSSSGSPLSVS*RLKMTTRVPLV
Trigger: GACTAGTGGAACCCTGGTCGTCATTTTCAATCTCAAACTCACGGACAACGGAGAACCCGAACTAGACGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TGTATAGTGGTTGGGACTTGCATAGCCCTCTTGCGTTaGAAATGCAACTCATCAGATGGGGGTCTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: CIVVGTCIALLR*KCNSSDGGLFQ
Trigger: CTGGAACAGACCCCCATCTGATGAGTTGCATTTCAAACGCAAGAGGGCTATGCAAGTCCCAACCACTATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TTCATGATTTGGGGAGTTTCGACCTTCCAAGGGTTGTaGGACTTGGGGACTACAGATGGTGACAGGGATTGT +
Preference number: 6 (lower is better)
Translates to: FMIWGVSTFQGL*DLGTTDGDRDC
Trigger: ACAATCCCTGTCACCATCTGTAGTCCCCAAGTCCAACAACCCTTGGAAGGTCGAAACTCCCCAAATCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TCTCTTGGTGTGCTATCCTTGGGCATATCCTCAAACTaGACCTTCCACCATACCACATTATCACCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SLGVLSLGISSN*TFHHTTLSPTS
Trigger: GGAGGTGGGTGATAATGTGGTATGGTGGAAGGTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp GGATTTGAGGTTACGTCTAGTTCGGGTTCTCCGTTGTCCGTGAGTTaGAGATTGAAAATGACGACCAGGGTTCCACTAGTCCCAGAAATC +
Preference number: 6 (lower is better)
Translates to: GFEVTSSSGSPLSVS*RLKMTTRVPLVPEI
Trigger: GATTTCTGGGACTAGTGGAACCCTGGTCGTCATTTTCAATCTCAAACTCACGGACAACGGAGAACCCGAACTAGACGTAACCTCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp TTTTCACTGCCCTTTTCCACCCAGCAGTCTCTTGGTGTGCTATCCTaGGGCATATCCTCAAACTTGACCTTCCACCATACCACATTATCA +
Preference number: 6 (lower is better)
Translates to: FSLPFSTQQSLGVLS*GISSNLTFHHTTLS
Trigger: TGATAATGTGGTATGGTGGAAGGTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAGACTGCTGGGTGGAAAAGGGCAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp AAAGGGACTATCACCTCATCAATGCCTTCTTCCTCATaGAAGGTTCGAGACAGGAAGAGGCAACTCATGGTG +
Preference number: 6 (lower is better)
Translates to: KGTITSSMPSSS*KVRDRKRQLMV
Trigger: CACCATGAGTTGCCTCTTCCTGTCTCGAACCTTTCATGAGGAAGAAGGCATTGATGAGGTGATAGTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp TACATTTTCACTGCCCTTTTCCACCCAGCAGTCTCTTaGTGTGCTATCCTTGGGCATATCCTCAAACTTGAC +
Preference number: 6 (lower is better)
Translates to: YIFTALFHPAVS*CAILGHILKLD
Trigger: GTCAAGTTTGAGGATATGCCCAAGGATAGCACACCAAGAGACTGCTGGGTGGAAAAGGGCAGTGAAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp TCCCCCTTTCTATCCTCTTGCTGTTCATCAGTGCTCTaGTACTCTGGAGATGGCTTCACTAGCCATACATTT +
Preference number: 6 (lower is better)
Translates to: SPFLSSCCSSVL*YSGDGFTSHTF
Trigger: AAATGTATGGCTAGTGAAGCCATCTCCAGAGTACCAGAGCACTGATGAACAGCAAGAGGATAGAAAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp ATCCATTCCGACTCCATTATCCAGAAAACAAAGCATGAATCCTCCTaGAAGGTCCTCTCGCTTTTCAGCGTAAATATCTATCCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: IHSDSIIQKTKHESS*KVLSLFSVNIYPGG
Trigger: GCCACCCGGATAGATATTTACGCTGAAAAGCGAGAGGACCTTCAAGGAGGATTCATGCTTTGTTTTCTGGATAATGGAGTCGGAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 90 bp CGGATATCTTTTGGATTTGAGGTTACGTCTAGTTCGGGTTCTCCGTaGTCCGTGAGTTTGAGATTGAAAATGACGACCAGGGTTCCACTA +
Preference number: 6 (lower is better)
Translates to: RISFGFEVTSSSGSP*SVSLRLKMTTRVPL
Trigger: TAGTGGAACCCTGGTCGTCATTTTCAATCTCAAACTCACGGACAACGGAGAACCCGAACTAGACGTAACCTCAAATCCAAAAGATATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp TTTGGATTTGAGGTTACGTCTAGTTCGGGTTCTCCGTaGTCCGTGAGTTTGAGATTGAAAATGACGACCAGG +
Preference number: 6 (lower is better)
Translates to: FGFEVTSSSGSP*SVSLRLKMTTR
Trigger: CCTGGTCGTCATTTTCAATCTCAAACTCACGGACAACGGAGAACCCGAACTAGACGTAACCTCAAATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CAA 72 bp GGTGTTCGTTTGGCTGATTTCCCAAACTGGATCACATaGATGACATCGTTTGGATCCATTCCGACTCCATTA +
Preference number: 6 (lower is better)
Translates to: GVRLADFPNWIT*MTSFGSIPTPL
Trigger: TAATGGAGTCGGAATGGATCCAAACGATGTCATCAATGTGATCCAGTTTGGGAAATCAGCCAAACGAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp CTTCTTCCTCAGTGTGGAAGGGAGAATACTTGTAGATaGGCTCTGTCTCAATGGCAAACTTCTCCATGTTAT +
Preference number: 6 (lower is better)
Translates to: LLPQCGRENTCR*ALSQWQTSPCY
Trigger: ATAACATGGAGAAGTTTGCCATTGAGACAGAGCTCATCTACAAGTATTCTCCCTTCCACACTGAGGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS TCA 72 bp ATGCAACTCATCAGATGGGGGTCTGTTCCAGTTAGCTaGAAGGTAGCCAAACTCATCCCAGAACTTAATAAT +
Preference number: 6 (lower is better)
Translates to: MQLIRWGSVPVS*KVAKLIPELNN
Trigger: ATTATTAAGTTCTGGGATGAGTTTGGCTACCTTTCAGCTAACTGGAACAGACCCCCATCTGATGAGTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2
CDS CCA 72 bp CTTTCAGAGGGAGAGACAGTAATTCTTCTGAATTCATaGCACCTAGCTCCTTCTTGGATATGGGAAAACTCA +
Preference number: 6 (lower is better)
Translates to: LSEGETVILLNS*HLAPSWIWENS
Trigger: TGAGTTTTCCCATATCCAAGAAGGAGCTAGGTGCCATGAATTCAGAAGAATTACTGTCTCTCCCTCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053896.8
ENSMUST00000131954.2