RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORC2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034543

Ensembl transcript IDs: ENSMUST00000093389.9, ENSMUST00000096441.5, ENSMUST00000140242.8

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGTGCTATCCAGCCCAGGGATCTGACCGGTCAGAGCTGTCTATaGTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: QSAIQPRDLTGQSCL*LSLDSVVDSGNGSS
Trigger: GGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCATAGACAGCTCTGACCGGTCAGATCCCTGGGCTGGATAGCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 90 bp AGCCCTGTCTGGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTaGTACTGGGCCTGTTTTGATCACCCCTTGAGGGTCTTGCAGAGC +
Preference number: 1 (lower is better)
Translates to: SPVWTPGDLLQGVSF*YWACFDHPLRVLQS
Trigger: GCTCTGCAAGACCCTCAAGGGGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCCAGACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 90 bp AGAAACATCTCCAAGCTGTCTGGATACTGTCACATCCAAGATGACTaGCAGCTGCTCAGGCAGCCTACAGACCTTCACAGCCCTGTCTGG +
Preference number: 1 (lower is better)
Translates to: RNISKLSGYCHIQDD*QLLRQPTDLHSPVW
Trigger: CCAGACAGGGCTGTGAAGGTCTGTAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCTTGGAGATGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 90 bp AAACAACCTGATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTaGACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGACCC +
Preference number: 1 (lower is better)
Translates to: KQPDGRTQAGTSSHM*TVPSPTLPHLLQRP
Trigger: GGGTCTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATCAGGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 90 bp TCACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTaGCAGCCTTGCCTTGATGGATACAAATCCCAAGGTGGTTTGGAT +
Preference number: 1 (lower is better)
Translates to: SPTLPHLLQRPQDTR*QPCLDGYKSQGGLD
Trigger: ATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 90 bp TCACACCTGCACACCCTGAGAATCTTTGGAGTTCAACATTCAGAGTaGTATCCAGCCCAGGGATCTGACCGGTCAGAGCTGTCTATGCTT +
Preference number: 1 (lower is better)
Translates to: SHLHTLRIFGVQHSE*YPAQGSDRSELSML
Trigger: AAGCATAGACAGCTCTGACCGGTCAGATCCCTGGGCTGGATAGCACTCTGAATGTTGAACTCCAAAGATTCTCAGGGTGTGCAGGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 90 bp GCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTaGCAGGAGCTGAATGGTTCAGACTCTGTGCCCTTTCAAGAGTCA +
Preference number: 1 (lower is better)
Translates to: ASPTSGWCFLHPMLR*QELNGSDSVPFQES
Trigger: TGACTCTTGAAAGGGCACAGAGTCTGAACCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 90 bp CCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTaGTGGATACAAATCCCAAGGTGGTTTGGATCAAGAGTACAAAAT +
Preference number: 1 (lower is better)
Translates to: PSSAETPGHKVAALP*WIQIPRWFGSRVQN
Trigger: ATTTTGTACTCTTGATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCTGTCACATCCAAGATaGCTGACAGCTGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: KALQELAPLWKPSPPESFLSHPR*LTAAQA
Trigger: TGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACTGTCACATCCAAGATaGCTGACAGCTGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPLSHPR*LTAAQA
Trigger: TGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR GCA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTCATCCTATGTTGAGGTaGCAGGAGCTGAATGGTTCA +
Preference number: 2 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLHPMLR*QELNGS
Trigger: TGAACCATTCAGCTCCTGGCACCTCAACATAGGATG...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGTGAAGAGTTGGGACTaGAACCAGAATTCTTCCGAC +
Preference number: 2 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLVKSWD*NQNSSD
Trigger: GTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCAC...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGTGGCAGCCTTGCCTTaGTGGATACAAATCCCAAGG +
Preference number: 2 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEVAALP*WIQIPR
Trigger: CCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCAC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGAACTAGCACCACTGTaGAAGCCTTCTCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEELAPL*KPSPPE
Trigger: CTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp ATCCAGCCCAGGGATCTGACCGGTCAGAGCTGTCTATGCTTGAGCTaGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAA +
Preference number: 2 (lower is better)
Translates to: IQPRDLTGQSCLCLS*DSVVDSGNGSSSNK
Trigger: TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCATAGACAGCTCTGACCGGTCAGATCCCTGGGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCCACCAAGTCACAAATaGACTCCCCTCCCCGAAGCT +
Preference number: 2 (lower is better)
Translates to: QEICYRECLSDTGPVLITPPSHK*TPLPEA
Trigger: AGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp CCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTaGATGGATACAAATCCCAAGGTGGTTTGGATCAAGAGTACAAAA +
Preference number: 2 (lower is better)
Translates to: PIFCRDPRTQGGSLA*MDTNPKVVWIKSTK
Trigger: TTTTGTACTCTTGATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGAGAGCTGTCTATGCTTaGGCTTGGATAGTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAERAVYA*AWIVWL
Trigger: CAACCACACTATCCAAGCTCAAGCATAGACAGCTCT...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCCATCTCCAAGCTGTCTaGATACTGTCACATCCAAGA +
Preference number: 2 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCHLQAV*ILSHPR
Trigger: TCTTGGATGTGACAGTATCCAGACAGCTTGGAGATG...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCCATCTCCAAGCTGTCTaGATACTGTCACATCCAAGA +
Preference number: 2 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALHLQAV*ILSHPR
Trigger: TCTTGGATGTGACAGTATCCAGACAGCTTGGAGATG...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACCACCCTGAGAATCTTTaGAGTTCAACATTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: ALQELAPLWKPSPPESFHHPENL*SSTFRV
Trigger: CACTCTGAATGTTGAACTCCAAAGATTCTCAGGGTG...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp CTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTaGAGGTGCCAGGAGCTGAATGGTTCAGACTCTGTGCCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: LRASPTSGWCFLHPM*RCQELNGSDSVPFQ
Trigger: TTGAAAGGGCACAGAGTCTGAACCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp TGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATTGTaGATGTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: CRAESLGPCIFHIPL*MSLEPLQLQDGAFF
Trigger: GAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGACATCAACAATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp TCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATaGTTGATGTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: SCRAESLGPCIFHIP*LMSLEPLQLQDGAF
Trigger: GAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGACATCAACAATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACACAAATGTCTCACATaGCTCAAACCAAGATCAAGT +
Preference number: 2 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPHKCLT*LKPRSS
Trigger: ACTTGATCTTGGTTTGAGTCATGTGAGACATTTGTG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACAAATGTCTCACATaGCTCAAACCAAGATCAAGT +
Preference number: 2 (lower is better)
Translates to: KALQELAPLWKPSPPESFHKCLT*LKPRSS
Trigger: ACTTGATCTTGGTTTGAGTCATGTGAGACATTTGTG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCGCATATTGGGAAATTTaGGCCTTAAGAAACATCTCC +
Preference number: 2 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALAYWEI*ALRNIS
Trigger: GGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGC...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR GCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGCCAACTTCAGGATGGTaGTTTCTTCATCCTATGTTG +
Preference number: 2 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEPTSGW*FLHPML
Trigger: CAACATAGGATGAAGAAAGCACCATCCTGAAGTTGG...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGTCTCCAACTTCAGGATaGTGCTTTCTTCATCCTATG +
Preference number: 2 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAESPTSG*CFLHPM
Trigger: CATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGA...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTAGGGTCTTGCAGAGCTaGGTCCCTGGGGCCATGTAT +
Preference number: 2 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSRVLQS*VPGAMY
Trigger: ATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCT...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR GCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGATGGTTCAGACTCTGTaGCCTTTCAAGAGTCACACA +
Preference number: 2 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKMVQTL*PFKSHT
Trigger: TGTGTGACTCTTGAAAGGGCACAGAGTCTGAACCAT...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR GCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCATGGTTCAGACTCTGTaGCCTTTCAAGAGTCACACA +
Preference number: 2 (lower is better)
Translates to: QEICYRECLSDTGPVLITMVQTL*PFKSHT
Trigger: TGTGTGACTCTTGAAAGGGCACAGAGTCTGAACCAT...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR TCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTCCACCAAGTCACAAATaGACTCCCCTCCCCGAAGCT +
Preference number: 2 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSPPSHK*TPLPEA
Trigger: AGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGG...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGAACTAGCACCACTGTaGAAGCCTTCTCCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSELAPL*KPSPPE
Trigger: CTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 90 bp GTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGTAGGTGGCATATaGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGATA +
Preference number: 2 (lower is better)
Translates to: VDSGNGSSSNKVGGI*GNLSLKKHLQAVWI
Trigger: TATCCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTACTTTGTTACTGGAGGAGCCATTTCCTGAGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR GCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTCATCCTATGTTGAGGTaGCAGGAGCTGAATGGTTCA +
Preference number: 2 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSHPMLR*QELNGS
Trigger: TGAACCATTCAGCTCCTGGCACCTCAACATAGGATG...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CCA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCTCTCCAACTTCAGGATaGTGCTTTCTTCATCCTATG +
Preference number: 2 (lower is better)
Translates to: KISLEQECEELGLEPEFFSPTSG*CFLHPM
Trigger: CATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGA...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp GCAGCAGCAAAGGCTCTCCAGGAACTAGCACCACTGTaGAAGCCTTCTCCTCCAGAGAGCTTTCACACCTGC +
Preference number: 3 (lower is better)
Translates to: AAAKALQELAPL*KPSPPESFHTC
Trigger: GCAGGTGTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTTTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp TCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTaGTGTGTTGAGGGCAGGTATGAGCAGGAGTTAGCC +
Preference number: 3 (lower is better)
Translates to: STKSQMNSPPRS*CVEGRYEQELA
Trigger: GGCTAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp GGATCATACTCTGCCTGGATAGGGTCAACAGAAAGTTaGATGGGGGCAGCCGTGGGGGTAAGTGCACCAACT +
Preference number: 3 (lower is better)
Translates to: GSYSAWIGSTES*MGAAVGVSAPT
Trigger: AGTTGGTGCACTTACCCCCACGGCTGCCCCCATCCAACTTTCTGTTGACCCTATCCAGGCAGAGTATGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp CTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTaGCAGCCTTGCCTTGATGGATACAAATCCCAAGGT +
Preference number: 3 (lower is better)
Translates to: LPHLLQRPQDTR*QPCLDGYKSQG
Trigger: ACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCAGGTGGCAGCCTTGCCTaGATGGATACAAATCCCAAG +
Preference number: 3 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPGGSLA*MDTNPK
Trigger: CTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACC...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 72 bp GTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTaGTCACCCCTTGAGGGTCTTGCAGAGCTGAGTCCC +
Preference number: 3 (lower is better)
Translates to: VTGSVFLILGLF*SPLEGLAELSP
Trigger: GGGACTCAGCTCTGCAAGACCCTCAAGGGGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 72 bp TCCAAGCTGTCTGGATACTGTCACATCCAAGATGACTaGCAGCTGCTCAGGCAGCCTACAGACCTTCACAGC +
Preference number: 3 (lower is better)
Translates to: SKLSGYCHIQDD*QLLRQPTDLHS
Trigger: GCTGTGAAGGTCTGTAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCTTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR TCA 72 bp GCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTaGTGGATACAAATCCCAAGGTGGTTTGGATCAAGA +
Preference number: 3 (lower is better)
Translates to: AETPGHKVAALP*WIQIPRWFGSR
Trigger: TCTTGATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp TGTCTGGATACTGTCACATCCAAGATGACTGACAGCTaGTCAGGCAGCCTACAGACCTTCACAGCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: CLDTVTSKMTDS*SGSLQTFTALS
Trigger: AGACAGGGCTGTGAAGGTCTGTAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp CACACCCTGAGAATCTTTGGAGTTCAACATTCAGAGTaGTATCCAGCCCAGGGATCTGACCGGTCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: HTLRIFGVQHSE*YPAQGSDRSEL
Trigger: CAGCTCTGACCGGTCAGATCCCTGGGCTGGATAGCACTCTGAATGTTGAACTCCAAAGATTCTCAGGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp CTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTaGCTTGATGGATACAAATCCCAAGGTGGTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LLQRPQDTRWQP*LDGYKSQGGLD
Trigger: ATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTaGACAGTTCCCTCACCAACACTTCCCCATCTTCTG +
Preference number: 3 (lower is better)
Translates to: DGRTQAGTSSHM*TVPSPTLPHLL
Trigger: CAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCCAGAGCTGTCTATGCTaGAGCTTGGATAGTGTGGTT +
Preference number: 3 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSQSCLC*SLDSVV
Trigger: AACCACACTATCCAAGCTCAAGCATAGACAGCTCTG...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACAGGAGTGTGAAGAGTaGGGACTGGAACCAGAATTC +
Preference number: 3 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPQECEE*GLEPEF
Trigger: GAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCAGAGCTGTCTATGCTaGAGCTTGGATAGTGTGGTT +
Preference number: 3 (lower is better)
Translates to: KALQELAPLWKPSPPESFQSCLC*SLDSVV
Trigger: AACCACACTATCCAAGCTCAAGCATAGACAGCTCTG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp CAGAGAGCTTTCACACCTGCACACCCTGAGAATCTTTaGAGTTCAACATTCAGAGTGCTATCCAGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: QRAFTPAHPENL*SSTFRVLSSPG
Trigger: CCCTGGGCTGGATAGCACTCTGAATGTTGAACTCCAAAGATTCTCAGGGTGTGCAGGTGTGAAAGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp GTTGATGTCCTTAGAGCCTCTCCAACTTCAGGATGGTaGTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VDVLRASPTSGW*FLHPMLRCQEL
Trigger: CAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGACATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATTTTCTTCATCCTATGTaGAGGTGCCAGGAGCTGAAT +
Preference number: 3 (lower is better)
Translates to: LEGLAELSPWGHVSFISHFLHPM*RCQELN
Trigger: ATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAA...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR GCA 72 bp ACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTaGCAGGAGCTGAATGGTTCAGACTCTGTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: TSGWCFLHPMLR*QELNGSDSVPF
Trigger: AAAGGGCACAGAGTCTGAACCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGTACAAAATCAGTCTaGAACAGGAGTGTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCSTKSV*NRSVKS
Trigger: ACTCTTCACACTCCTGTTCAAGACTGATTTTGTACT...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp ATTGTTGATGTCCTTAGAGCCTCTCCAACTTCAGGATaGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: IVDVLRASPTSG*CFLHPMLRCQE
Trigger: CTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGACATCAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CCA 72 bp AAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTaGAACCAGAATTCTTCCGACAGCCATCAGATGAAG +
Preference number: 3 (lower is better)
Translates to: KSVLNRSVKSWD*NQNSSDSHQMK
Trigger: CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR-3UTR CAA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGGGCATATTGGGAAATTaGAGCCTTAAGAAACATCTC +
Preference number: 3 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKGILGN*SLKKHL
Trigger: GAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCC...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCCCCCACCACATGCCATaGCCCCTTCCAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSPHHMP*PLPAVG
Trigger: GCCCACAGCTGGAAGGGGGCATGGCATGTGGTGGGG...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGGCAAGGCCACAGCCTaGCGGGCCACCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEGKATA*RATIAS
Trigger: GGAGGCTATGGTGGCCCGGCAGGCTGTGGCCTTGCC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCGGTGACCGAGGACGCTaGGGTCTCCGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCGDRGR*GLRTGS
Trigger: AGAACCTGTACGGAGACCTCAGCGTCCTCGGTCACC...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCATGTGTGTCAGGGCTCTaGTGCTCTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPCVSGL*CSGEGG
Trigger: GCCACCTTCCCCAGAGCATCAGAGCCCTGACACACA...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCAACAACCCCACCACATaGCATGCCCCCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSNNPTT*HAPFQL
Trigger: CAGCTGGAAGGGGGCATGGCATGTGGTGGGGTTGTT...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACCTAAAGTACGAGCTTTaGTCTCTGCCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHLKYEL*SLPPGP
Trigger: AGGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAG...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGCCCCACCACATGCCATaGCCCCTTCCAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKPHHMP*PLPAVG
Trigger: GCCCACAGCTGGAAGGGGGCATGGCATGTGGTGGGG...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGGCAAGGCCACAGCCTaGCGGGCCACCATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKGKATA*RATIAS
Trigger: GGAGGCTATGGTGGCCCGGCAGGCTGTGGCCTTGCC...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGTCGGGGTACAGTCTTaGTGGGAGGGTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVEVGVQS*WEGLQA
Trigger: AGCCTGCAAACCCTCCCATCAAGACTGTACCCCGAC...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCATTGCCACGGACTGTTTaGCAGGTGGCTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPLPRTV*QVALAS
Trigger: AGAAGCCAGAGCCACCTGTCAAACAGTCCGTGGCAA...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTTTGCCACGGACTGTTTaGCAGGTGGCTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KALQELAPLWKPSPPESFLPRTV*QVALAS
Trigger: AGAAGCCAGAGCCACCTGTCAAACAGTCCGTGGCAA...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGACGAGCTTTGCTCTCTaGCTCCCGGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAETSFAL*LPGLLF
Trigger: GAAGAGAAGGCCCGGGAGGCAGAGAGCAAAGCTCGT...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGAACAACCCCACCACATaGCATGCCCCCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVENNPTT*HAPFQL
Trigger: CAGCTGGAAGGGGGCATGGCATGTGGTGGGGTTGTT...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTACAGTACTGTGCCAAGTaGTCCCCCATTGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELQYCAK*SPIARS
Trigger: ACTTCGAGCAATGGGGGAGCACTTGGCACAGTACTG...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCGTCCTTCCAGTACTGTaGCAAGTGCTCCCCCATTGC +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCVLPVL*QVLPHC
Trigger: GCAATGGGGGAGCACTTGGCACAGTACTGGAAGGAC...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTGTCCTTCCAGTACTGTaGCAAGTGCTCCCCCATTGC +
Preference number: 4 (lower is better)
Translates to: KALQELAPLWKPSPPESFVLPVL*QVLPHC
Trigger: GCAATGGGGGAGCACTTGGCACAGTACTGGAAGGAC...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGTGGCTTCGTGCCCTCTaGCGAGGTTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVEWLRAL*RGFCHL
Trigger: CAGATGGCAGAAACCTCGCCAGAGGGCACGAAGCCA...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTAACGCAGCTCACTAGATaGAGGTTGGTTCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELTQLTR*RLVPVG
Trigger: GCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGT...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTTCTACTGAACTCAGCTaGAAGGGGAGAGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLSTELS*KGRVLH
Trigger: ATGGAGGACTCTCCCCTTCCAGCTGAGTTCAGTAGA...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGGCTGCTGTAGTGGGTaGTTTTGGAAGGCTGATAAC +
Preference number: 4 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLGCCSG*FWKADN
Trigger: GTTATCAGCCTTCCAAAACCACCCACTACAGCAGCC...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGGTCGGGGTACAGTCTTaGTGGGAGGGTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLVGVQS*WEGLQA
Trigger: AGCCTGCAAACCCTCCCATCAAGACTGTACCCCGAC...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATCTAAAGTACGAGCTTTaGTCTCTGCCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEGLAELSPWGHVSFISHLKYEL*SLPPGP
Trigger: AGGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAG...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACCTTCACAGCAAGTTTaGCCCGCTTGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPPSQQV*PACISL
Trigger: GAGAGAGATGCAAGCGGGGCAAACTTGCTGTGAAGG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCTTTGACAGGTGGCTCTaGCTTCTTGACCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSFDRWL*LLDHWS
Trigger: ACTCCAGTGGTCAAGAAGCCAGAGCCACCTGTCAAA...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACTTCCTGAGTTCAGCTaGGTGATCTTCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPLPEFS*VIFPST
Trigger: AGTGCTGGGGAAGATCACCCAGCTGAACTCAGGAAG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCCTTCCTGAGTTCAGCTaGGTGATCTTCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCLPEFS*VIFPST
Trigger: AGTGCTGGGGAAGATCACCCAGCTGAACTCAGGAAG...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTACACCCAGCGGTCTCTTaGTGTTGTATCTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLHPAVS*CCICGH
Trigger: GTGCCCACAGATACAACACCAAGAGACCGCTGGGTG...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp TGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTaGATGGATACAAATCCCAAGGTGGTTTGGATCAAG +
Preference number: 4 (lower is better)
Translates to: CRDPRTQGGSLA*MDTNPKVVWIK
Trigger: CTTGATCCAAACCACCTTGGGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATCCTTGTGTCCATGGATaGAGATCCTCATCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: LEGLAELSPWGHVSFISHPCVHG*RSSSGD
Trigger: ATCCCCGGATGAGGATCTTCATCCATGGACACAAGG...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCATGGGCGTGGTTTTCTaGAGAGCTTCTAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSMGVVF*RASSFS
Trigger: GGAAAAGCTAGAAGCTCTTCAGAAAACCACGCCCAT...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACATGGGCGTGGTTTTCTaGAGAGCTTCTAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHMGVVF*RASSFS
Trigger: GGAAAAGCTAGAAGCTCTTCAGAAAACCACGCCCAT...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGGTGACCGAGGACGCTaGGGTCTCCGTACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKGDRGR*GLRTGS
Trigger: AGAACCTGTACGGAGACCTCAGCGTCCTCGGTCACC...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTAGTTTTGATGGCTTTTTaGGCAGGGACCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLVLMAF*AGTSRR
Trigger: CCTTCGGGAGGTCCCTGCTCAAAAAGCCATCAAAAC...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAATGTGTGTCAGGGCTCTaGTGCTCTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKCVSGL*CSGEGG
Trigger: GCCACCTTCCCCAGAGCATCAGAGCCCTGACACACA...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCCTTCCTCATGAAAGGTaGGAGACAAGAAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCLPHER*ETRRGR
Trigger: CCTGCCTCTTCTTGTCTCGCACCTTTCATGAGGAAG...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCGCAATCCGTGCTACATaGTCTGCTTTCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSAIRAT*SAFFTS
Trigger: GGAAGTGAAGAAAGCAGAGCATGTAGCACGGATTGC...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGACGAGCTTTGCTCTCTaGCTCCCGGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKTSFAL*LPGLLF
Trigger: GAAGAGAAGGCCCGGGAGGCAGAGAGCAAAGCTCGT...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTATCTTTGAGAGCTCGCTaGTTGGCATCCTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELSLRAR*LASLIL
Trigger: AAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGA...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTATTGCTCGAAGTAGATaGCGGTACTCCTTAGCATCA +
Preference number: 4 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLIARSR*RYSLAS
Trigger: TGATGCTAAGGAGTACCGGCATCTACTTCGAGCAAT...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCTGGCTTCGTGCCCTCTaGCGAGGTTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITWLRAL*RGFCHL
Trigger: CAGATGGCAGAAACCTCGCCAGAGGGCACGAAGCCA...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCTGCACCTTGTGTCCATaGATGAAGATCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALCTLCP*MKILIR
Trigger: CCGGATGAGGATCTTCATCCATGGACACAAGGTGCA...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGTGATGGCTGTATTCTaGACCTGCCGCAACATCACC +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEVMAVF*TCRNIT
Trigger: GGTGATGTTGCGGCAGGTCCAGAATACAGCCATCAC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGACGCAGCTCACTAGATaGAGGTTGGTTCCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAETQLTR*RLVPVG
Trigger: GCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGT...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTACAGCTTGTGAGCGGATaGGCGTGGTTTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLQLVSG*AWFSEE
Trigger: CTCTTCAGAAAACCACGCCCATCCGCTCACAAGCTG...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCATTTGACAGGTGGCTCTaGCTTCTTGACCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPFDRWL*LLDHWS
Trigger: ACTCCAGTGGTCAAGAAGCCAGAGCCACCTGTCAAA...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGGAAGACCATCAGAGGTaGAAGGCTCAGGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLEDHQR*KAQARP
Trigger: TGGCCTTGCCTGAGCCTTCCACCTCTGATGGTCTTC...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCCACTCAGCTCCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALHSAPS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGGAGCTGAGTG...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCGAATGGCACAGATTCTaGAGCCCCACCTCATATTGC +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCEWHRF*SPTSYC
Trigger: GCAATATGAGGTGGGGCTCCAGAATCTGTGCCATTC...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCTCCCAGGAATCTTCATaGACTGGTTCATCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSSQESS*TGSSLA
Trigger: AGCAAGTGATGAACCAGTTCATGAAGATTCCTGGGA...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTACTTTCTCATACATCTTaGTCAGGCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELLSHTS*SGGYSC
Trigger: ACAACTGTAGCCGCCTGATCAAGATGTATGAGAAAG...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTATCTAGCTTTTCCTGCTaGTGGCGAATTTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELSSFSC*WRIFSV
Trigger: GACAGAGAAAATTCGCCAGCAGCAGGAAAAGCTAGA...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACTCTAGCTTTTCCTGCTaGTGGCGAATTTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHSSFSC*WRIFSV
Trigger: GACAGAGAAAATTCGCCAGCAGCAGGAAAAGCTAGA...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCACTAGCAGCATCACTTaGATCCATTCCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALTSSIT*IHSCSI
Trigger: GATGGAGCAGGAATGGATCCAAGTGATGCTGCTAGT...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCTTCGAGCATTCCAGGTaGGCAATGGGACAATTACTT +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSFEHSR*AMGQLL
Trigger: AAGTAATTGTCCCATTGCCCACCTGGAATGCTCGAA...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACGAGGTTGGTTCCAGTTaGCAGAAAGATAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHEVGSS*QKDSQT
Trigger: AGTTTGGCTATCTTTCTGCCAACTGGAACCAACCTC...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATTCTACTGAACTCAGCTaGAAGGGGAGAGTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LEGLAELSPWGHVSFISHSTELS*KGRVLH
Trigger: ATGGAGGACTCTCCCCTTCCAGCTGAGTTCAGTAGA...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCACCCAGCGGTCTCTTaGTGTTGTATCTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITHPAVS*CCICGH
Trigger: GTGCCCACAGATACAACACCAAGAGACCGCTGGGTG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGTGGTATCAGGCTCAATaGGAAGACCATCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEWYQAQ*EDHQRW
Trigger: CCACCTCTGATGGTCTTCCCATTGAGCCTGATACCA...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCGCTCCTTCTTGGAGATaGGGAAACTTGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCAPSWR*GNLEVR
Trigger: TCTTACCTCCAAGTTTCCCCATCTCCAAGAAGGAGC...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCTATTCAAAGGTTAGTTaGGCTCGGTTGAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCYSKVS*ARLRLL
Trigger: CAGCAGTCTCAACCGAGCTCAACTAACCTTTGAATA...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGATGCCTTCTTCCTCATaGAAGGTGCGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEMPSSS*KVRDKK
Trigger: CTTCTTGTCTCGCACCTTTCATGAGGAAGAAGGCAT...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCCTTGTGTCCATGGATaGAGATCCTCATCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITPCVHG*RSSSGD
Trigger: ATCCCCGGATGAGGATCTTCATCCATGGACACAAGG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCGTTTTGATGGCTTTTTaGGCAGGGACCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITVLMAF*AGTSRR
Trigger: CCTTCGGGAGGTCCCTGCTCAAAAAGCCATCAAAAC...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTACTCTGGCGAGGTTTCTaGCATCTGGATATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLLWRGF*HLDIFW
Trigger: CCAAAAGATATCCAGATGGCAGAAACCTCGCCAGAG...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGTCAGGTCTCCACCCATaGGTACTTCTAAAGTACGAG +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVESGLHP*VLLKYE
Trigger: CTCGTACTTTAGAAGTACGCATGGGTGGAGACCTGA...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ACCAAGATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTTCTTTGAGAGCTCGCTaGTTGGCATCCTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: TKIKSTKSQMNSPPRSCCSLRAR*LASLIL
Trigger: AAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGA...ACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGATCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp ACCAAGATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGCATCAGCAAAGTCCTaGTTGTTATGTGTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TKIKSTKSQMNSPPRSCCASAKS*LLCVGS
Trigger: GGAGCCTACACATAACAAGCAGGACTTTGCTGATGC...ACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGATCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCGCTTCTAGCTTTTCCTaGTGCTGGCGAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALASSFS*CWRIFS
Trigger: AGAGAAAATTCGCCAGCAGCAGGAAAAGCTAGAAGC...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCCTTCACAGCAAGTTTaGCCCGCTTGCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITPSQQV*PACISL
Trigger: GAGAGAGATGCAAGCGGGGCAAACTTGCTGTGAAGG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTAGCTTTTTCTCTGATGTaGGTAAGCTCTCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLAFSLM*VSSPLR
Trigger: CCTCAGAGGAGAGCTTACGCACATCAGAGAAAAAGC...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGCTGACTTCCCAAACTaGATCACACTAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVEADFPN*ITLAAS
Trigger: TGATGCTGCTAGTGTGATCCAGTTTGGGAAGTCAGC...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACTGCCCAATTTGAGTaGACTCAGGAGTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPTAQFE*TQEFFW
Trigger: CCAAAAGAACTCCTGAGTCCACTCAAATTGGGCAGT...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTAGGAATCTTCATGAACTaGTTCATCACTTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELGIFMN*FITCSS
Trigger: TGAGGAGCAAGTGATGAACCAGTTCATGAAGATTCC...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCGTGATGGCTGTATTCTaGACCTGCCGCAACATCACC +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITVMAVF*TCRNIT
Trigger: GGTGATGTTGCGGCAGGTCCAGAATACAGCCATCAC...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCTGTAGTGGGTGGTTTTaGAAGGCTGATAACAGACGT +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCCSGWF*KADNRR
Trigger: ACGTCTGTTATCAGCCTTCCAAAACCACCCACTACA...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGAAGGCTCTTGGAACTaGGGATTAAAGATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEEGSWN*GLKIVG
Trigger: CCCCACTATCTTTAATCCCCAGTTCCAAGAGCCTTC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGGCTCCTTCTTGGAGATaGGGAAACTTGGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEAPSWR*GNLEVR
Trigger: TCTTACCTCCAAGTTTCCCCATCTCCAAGAAGGAGC...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACGGAGTGCTACAATGTTaGTCCTCAACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHGVLQC*SSTSVT
Trigger: AGTTACAGAAGTTGAGGACCAACATTGTAGCACTCC...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATGCCTTCTTCCTCATaGAAGGTGCGAGACAAGAAG +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLMPSSS*KVRDKK
Trigger: CTTCTTGTCTCGCACCTTTCATGAGGAAGAAGGCAT...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATTCCCAGGAATCTTCATaGACTGGTTCATCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LEGLAELSPWGHVSFISHSQESS*TGSSLA
Trigger: AGCAAGTGATGAACCAGTTCATGAAGATTCCTGGGA...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWAVFWT*RNITLE
Trigger: CTCCAGGGTGATGTTGCGGCAGGTCCAGAATACAGC...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCCCAAAGGAACCTTTTaGTTCTGTTCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KALQELAPLWKPSPPESFPKGTF*FCSEAS
Trigger: TGAAGCTTCTGAACAGAAGCAAAAGGTTCCTTTGGG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGACTAGCAGCATCACTTaGATCCATTCCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLTSSIT*IHSCSI
Trigger: GATGGAGCAGGAATGGATCCAAGTGATGCTGCTAGT...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGTTCGAGCATTCCAGGTaGGCAATGGGACAATTACTT +
Preference number: 4 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVEFEHSR*AMGQLL
Trigger: AAGTAATTGTCCCATTGCCCACCTGGAATGCTCGAA...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCCAAGCTCTGTCTCAATaGCAAACTTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCQALSQ*QTSPHC
Trigger: ACAATGTGGAGAAGTTTGCCATTGAGACAGAGCTTG...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGTGCACCTTGTGTCCATaGATGAAGATCCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKCTLCP*MKILIR
Trigger: CCGGATGAGGATCTTCATCCATGGACACAAGGTGCA...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTAGAGGTTGGTTCCAGTTaGCAGAAAGATAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLEVGSS*QKDSQT
Trigger: AGTTTGGCTATCTTTCTGCCAACTGGAACCAACCTC...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGAGCTTTTCCTGCTGCTaGCGAATTTTCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLSFSCC*RIFSVS
Trigger: GCTGACAGAGAAAATTCGCCAGCAGCAGGAAAAGCT...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGGGCTGCTGTAGTGGGTaGTTTTGGAAGGCTGATAAC +
Preference number: 4 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRGCCSG*FWKADN
Trigger: GTTATCAGCCTTCCAAAACCACCCACTACAGCAGCC...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGGGTGCCTCAGTTGGCTaGAGTAGCCTAGAAGTACTA +
Preference number: 4 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWGASVG*SSLEVL
Trigger: TAGTACTTCTAGGCTACTCCAGCCAACTGAGGCACC...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGGAAGGCTCTTGGAACTaGGGATTAAAGATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLEGSWN*GLKIVG
Trigger: CCCCACTATCTTTAATCCCCAGTTCCAAGAGCCTTC...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGGAATGGCACAGATTCTaGAGCCCCACCTCATATTGC +
Preference number: 4 (lower is better)
Translates to: VLRASPTSGWCFLHPMLREWHRF*SPTSYC
Trigger: GCAATATGAGGTGGGGCTCCAGAATCTGTGCCATTC...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCAGGAGTGCTACAATGTTaGTCCTCAACTTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPGVLQC*SSTSVT
Trigger: AGTTACAGAAGTTGAGGACCAACATTGTAGCACTCC...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp TCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTaGAGGTGCCAGGAGCTGAATGGTTCAGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPTSGWCFLHPM*RCQELNGSDSV
Trigger: CACAGAGTCTGAACCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp GAGTCCCTGGGGCCATGTATCTTTCATATCCCATTGTaGATGTCCTTAGAGCCTCTCCAACTTCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: ESLGPCIFHIPL*MSLEPLQLQDG
Trigger: ACCATCCTGAAGTTGGAGAGGCTCTAAGGACATCAACAATGGGATATGAAAGATACATGGCCCCAGGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCGAATTCATGAGTGGTTaGATTTGTGTGGAGATATTC +
Preference number: 4 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSEFMSG*ICVEIF
Trigger: GAATATCTCCACACAAATTCAACCACTCATGAATTC...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCACAGTCTTGAAACGACTTaGTGTATACTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: ALQELAPLWKPSPPESFHSLETT*CILVHP
Trigger: AGGATGTACAAGTATACATCAAGTCGTTTCAAGACT...GTGAAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCACCACCTCATATTGCTTaGAGTATTCTTTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPPPHIA*SILSEE
Trigger: TTCCTCTGAAAGAATACTTCAAGCAATATGAGGTGG...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCCGATTTTAATCCATTaGCATACTGCCCAATTTGAG +
Preference number: 4 (lower is better)
Translates to: KALQELAPLWKPSPPESFPILIH*HTAQFE
Trigger: CTCAAATTGGGCAGTATGGCAATGGATTAAAATCGG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGCTCTGGCGAGGTTTCTaGCATCTGGATATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKLWRGF*HLDIFW
Trigger: CCAAAAGATATCCAGATGGCAGAAACCTCGCCAGAG...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGAGAGTCTCTTGGTCTaGACCTTGTGTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKESLLV*TLCPWM
Trigger: CATCCATGGACACAAGGTGCAGACCAAGAGACTCTC...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCTCAGGTCTCCACCCATaGGTACTTCTAAAGTACGAG +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITSGLHP*VLLKYE
Trigger: CTCGTACTTTAGAAGTACGCATGGGTGGAGACCTGA...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATTGCTCGAAGTAGATaGCGGTACTCCTTAGCATCA +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLIARSR*RYSLAS
Trigger: TGATGCTAAGGAGTACCGGCATCTACTTCGAGCAAT...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCGCTTCACAGCGGTCCTaGTCAGGATCAGGGTTCATG +
Preference number: 4 (lower is better)
Translates to: KISLEQECEELGLEPEFFASQRS*SGSGFM
Trigger: CATGAACCCTGATCCTGAGCAGGACCGCTGTGAAGC...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTATCTGTCAGCTGCTTCTaGTTTTCTTCCTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLSVSCF*FSSCVF
Trigger: AAAGACACAGGAAGAAAAGCAGAAGCAGCTGACAGA...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTAGCCCCACCTCATATTaGTTGAAGTATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KALQELAPLWKPSPPESFSPTSY*LKYSFR
Trigger: TCTGAAAGAATACTTCAAGCAATATGAGGTGGGGCT...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp ACCAAGATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGGAATCTTCATGAACTaGTTCATCACTTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TKIKSTKSQMNSPPRSCCGIFMN*FITCSS
Trigger: TGAGGAGCAAGTGATGAACCAGTTCATGAAGATTCC...ACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGATCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGAGCTTTTCCTGCTGCTaGCGAATTTTCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWSFSCC*RIFSVS
Trigger: GCTGACAGAGAAAATTCGCCAGCAGCAGGAAAAGCT...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGGTGCCTCAGTTGGCTaGAGTAGCCTAGAAGTACTA +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKGASVG*SSLEVL
Trigger: TAGTACTTCTAGGCTACTCCAGCCAACTGAGGCACC...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGTGGGACTGGTGGCAGTaGTATCAGGCTCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWWDWWQ*YQAQWE
Trigger: TTCCCATTGAGCCTGATACCACTGCCACCAGTCCCA...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAACACTCAGCTCCTTCTTaGAGATGGGGAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKHSAPS*RWGNLE
Trigger: CTCCAAGTTTCCCCATCTCCAAGAAGGAGCTGAGTG...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGTATTCAAAGGTTAGTTaGGCTCGGTTGAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWYSKVS*ARLRLL
Trigger: CAGCAGTCTCAACCGAGCTCAACTAACCTTTGAATA...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGAGCATCAGCATCTCTTaGATTATCAACCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLSISIS*IINQFS
Trigger: GCTGAACTGGTTGATAATGCAAGAGATGCTGATGCT...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAGCAATCCGTGCTACATaGTCTGCTTTCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKAIRAT*SAFFTS
Trigger: GGAAGTGAAGAAAGCAGAGCATGTAGCACGGATTGC...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTAVFWT*RNITLE
Trigger: CTCCAGGGTGATGTTGCGGCAGGTCCAGAATACAGC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCAGTACTGTGCCAAGTaGTCCCCCATTGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: KISLEQECEELGLEPEFFQYCAK*SPIARS
Trigger: ACTTCGAGCAATGGGGGAGCACTTGGCACAGTACTG...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGTCTGTCAGCTGCTTCTaGTTTTCTTCCTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLSVSCF*FSSCVF
Trigger: AAAGACACAGGAAGAAAAGCAGAAGCAGCTGACAGA...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCAGCTTGTGAGCGGATaGGCGTGGTTTTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KISLEQECEELGLEPEFFQLVSG*AWFSEE
Trigger: CTCTTCAGAAAACCACGCCCATCCGCTCACAAGCTG...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGTAGTGGGTGGTTTTaGAAGGCTGATAACAGACGT +
Preference number: 4 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRCSGWF*KADNRR
Trigger: ACGTCTGTTATCAGCCTTCCAAAACCACCCACTACA...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp CCCAAGGTGGTTTGGATCAAGAGTACAAAATCAGTCTaGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PKVVWIKSTKSV*NRSVKSWDWNQ
Trigger: CTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTTGTACTCTTGATCCAAACCACCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTAGAATTCATGAGTGGTTaGATTTGTGTGGAGATATTC +
Preference number: 4 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLEFMSG*ICVEIF
Trigger: GAATATCTCCACACAAATTCAACCACTCATGAATTC...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATAGTCTTGAAACGACTTaGTGTATACTTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: LEGLAELSPWGHVSFISHSLETT*CILVHP
Trigger: AGGATGTACAAGTATACATCAAGTCGTTTCAAGACT...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAACTTTCTCATACATCTTaGTCAGGCGGCTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKLSHTS*SGGYSC
Trigger: ACAACTGTAGCCGCCTGATCAAGATGTATGAGAAAG...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGCCACCTCATATTGCTTaGAGTATTCTTTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GHQEICYRECLSDTGPVLPPHIA*SILSEE
Trigger: TTCCTCTGAAAGAATACTTCAAGCAATATGAGGTGG...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCAGCATCAGCATCTCTTaGATTATCAACCAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QEICYRECLSDTGPVLITSISIS*IINQFS
Trigger: GCTGAACTGGTTGATAATGCAAGAGATGCTGATGCT...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGCTTCACAGCGGTCCTaGTCAGGATCAGGGTTCATG +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSASQRS*SGSGFM
Trigger: CATGAACCCTGATCCTGAGCAGGACCGCTGTGAAGC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGCCCAAAGGAACCTTTTaGTTCTGTTCAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWPKGTF*FCSEAS
Trigger: TGAAGCTTCTGAACAGAAGCAAAAGGTTCCTTTGGG...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAATCACTAGATGGAGGTTaGTTCCAGTTGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKSLDGG*FQLAER
Trigger: TCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGA...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGAAGACCATCAGAGGTaGAAGGCTCAGGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSEDHQR*KAQARP
Trigger: TGGCCTTGCCTGAGCCTTCCACCTCTGATGGTCTTC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCTGGTATCAGGCTCAATaGGAAGACCATCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KISLEQECEELGLEPEFFWYQAQ*EDHQRW
Trigger: CCACCTCTGATGGTCTTCCCATTGAGCCTGATACCA...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp GAGTACAAAATCAGTCTTGAACAGGAGTGTGAAGAGTaGGGACTGGAACCAGAATTCTTCCGACAGCCATCA +
Preference number: 4 (lower is better)
Translates to: EYKISLEQECEE*GLEPEFFRQPS
Trigger: TGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTTGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGAGCCCCACCTCATATTaGTTGAAGTATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKSPTSY*LKYSFR
Trigger: TCTGAAAGAATACTTCAAGCAATATGAGGTGGGGCT...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTTGGGACTGGTGGCAGTaGTATCAGGCTCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSWDWWQ*YQAQWE
Trigger: TTCCCATTGAGCCTGATACCACTGCCACCAGTCCCA...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGTAATCTGTTTCTACTaGACTCAGCTGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTVICFY*TQLEGE
Trigger: CTCCCCTTCCAGCTGAGTTCAGTAGAAACAGATTAC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAACCGATTTTAATCCATTaGCATACTGCCCAATTTGAG +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKPILIH*HTAQFE
Trigger: CTCAAATTGGGCAGTATGGCAATGGATTAAAATCGG...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGAGAGTCTCTTGGTCTaGACCTTGTGTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSESLLV*TLCPWM
Trigger: CATCCATGGACACAAGGTGCAGACCAAGAGACTCTC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGCAAGCTCTGTCTCAATaGCAAACTTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWQALSQ*QTSPHC
Trigger: ACAATGTGGAGAAGTTTGCCATTGAGACAGAGCTTG...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAATTGGTGTTGTATCTGTaGGCACATAGTCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKLVLYL*AHSQTS
Trigger: TGAAGTTTGACTATGTGCCCACAGATACAACACCAA...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGCTTCTAGCTTTTCCTaGTGCTGGCGAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTASSFS*CWRIFS
Trigger: AGAGAAAATTCGCCAGCAGCAGGAAAAGCTAGAAGC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR GCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGCTTTTTCTCTGATGTaGGTAAGCTCTCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSAFSLM*VSSPLR
Trigger: CCTCAGAGGAGAGCTTACGCACATCAGAGAAAAAGC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGCTGACTTCCCAAACTaGATCACACTAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSADFPN*ITLAAS
Trigger: TGATGCTGCTAGTGTGATCCAGTTTGGGAAGTCAGC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCTCACTAGATGGAGGTTaGTTCCAGTTGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTSLDGG*FQLAER
Trigger: TCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGA...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
3UTR CAA 72 bp TCCTCCAGTAACAAAGTAGGTGGCATATTGGGAAATTaGAGCCTTAAGAAACATCTCCAAGCTGTCTGGATA +
Preference number: 4 (lower is better)
Translates to: SSSNKVGGILGN*SLKKHLQAVWI
Trigger: TATCCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTACTTTGTTACTGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR TCA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGCCAAATAAGAATTCATaGGTGGTTGAATTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWPNKNS*VVEFVW
Trigger: CCACACAAATTCAACCACTCATGAATTCTTATTTGG...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CCA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCTTGGTGTTGTATCTGTaGGCACATAGTCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTLVLYL*AHSQTS
Trigger: TGAAGTTTGACTATGTGCCCACAGATACAACACCAA...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp ATGGGAAGACCATCAGAGGTGGAAGGCTCAGGCAAGGCCACAGCCTaGCGGGCCACCATAGCCTCCTCCTCCTCTCCACCTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: MGRPSEVEGSGKATA*RATIASSSSPPSCC
Trigger: ACAGCAAGAAGGTGGAGAGGAGGAGGAGGCTATGGTGGCCCGGCAGGCTGTGGCCTTGCCTGAGCCTTCCACCTCTGATGGTCTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTTCTAAAGTACGAGCTTaGCTCTCTGCCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLSKVRA*LSASRA
Trigger: GGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAGA...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCAAGTTTGCCCCGCTaGCATCTCTCTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLASLPR*HLSLLF
Trigger: GAAGAGGAGAGAGAGATGCAAGCGGGGCAAACTTGC...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp CCCGTGTCAGGTCTCCACCCATGCGTACTTCTAAAGTACGAGCTTTaGTCTCTGCCTCCCGGGCCTTCTCTTCAGCAATCCGTGCTACAT +
Preference number: 5 (lower is better)
Translates to: PVSGLHPCVLLKYEL*SLPPGPSLQQSVLH
Trigger: ATGTAGCACGGATTGCTGAAGAGAAGGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAGAAGTACGCATGGGTGGAGACCTGACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTTCCTTCACAGCAAGTTaGCCCCGCTTGCATCTCTCT +
Preference number: 5 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLSFTAS*PRLHLS
Trigger: AGAGAGATGCAAGCGGGGCAAACTTGCTGTGAAGGA...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCCATCGAACCGCATTCTaGCCCACCTCCACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALHRTAF*PTSTAV
Trigger: CACAGCTGTGGAGGTGGGCAAGAATGCGGTTCGATG...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp ACTTCACTTTCCATCGAACCGCATTCTTGCCCACCTCCACAGCTGTaGCTCGGCCTGTGTACCACTCACGGTTCACACGGACCTCTACAT +
Preference number: 5 (lower is better)
Translates to: TSLSIEPHSCPPPQL*LGLCTTHGSHGPLH
Trigger: ATGTAGAGGTCCGTGTGAACCGTGAGTGGTACACAGGCCGAGTCACAGCTGTGGAGGTGGGCAAGAATGCGGTTCGATGGAAAGTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp GTCTTGATGGGAGGGTTTGCAGGCTTTCGAGGTGCCTCAGTTGGCTaGAGTAGCCTAGAAGTACTAGTTTCTCCTCGGGCTGCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: VLMGGFAGFRGASVG*SSLEVLVSPRAAVV
Trigger: CACTACAGCAGCCCGAGGAGAAACTAGTACTTCTAGGCTACTCCAGCCAACTGAGGCACCTCGAAAGCCTGCAAACCCTCCCATCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp TCCACCTTCTTGCTGTGTGTCAGGGCTCTGATGCTCTGGGGAAGGTaGCTTCATCAATCGTACATCTTCACTGCCTTTCTCCACCCAGCG +
Preference number: 5 (lower is better)
Translates to: STFLLCVRALMLWGR*LHQSYIFTAFLHPA
Trigger: CGCTGGGTGGAGAAAGGCAGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAGAGCATCAGAGCCCTGACACACAGCAAGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CACCAACACTTCCCCATCTTCTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTCTCACTAGATGGAGGTaGGTTCCAGTTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: HQHFPIFCRDPRTQGGSLLTRWR*VPVGRK
Trigger: CTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAG...AAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAGAAGATGGGGAAGTGTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGCCACCCAGCGGTCTCTaGGTGTTGTATCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEPPSGL*VLYLWA
Trigger: TGCCCACAGATACAACACCAAGAGACCGCTGGGTGG...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp ATAGCCTCCTCCTCCTCTCCACCTTCTTGCTGTGTGTCAGGGCTCTaGTGCTCTGGGGAAGGTGGCTTCATCAATCGTACATCTTCACTG +
Preference number: 5 (lower is better)
Translates to: IASSSSPPSCCVSGL*CSGEGGFINRTSSL
Trigger: CAGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAGAGCATCAGAGCCCTGACACACAGCAAGAAGGTGGAGAGGAGGAGGAGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp ATTCCACGCTGGGCAATGGCTATGTCCTTCCAGTACTGTGCCAAGTaGTCCCCCATTGCTCGAAGTAGATGCCGGTACTCCTTAGCATCA +
Preference number: 5 (lower is better)
Translates to: IPRWAMAMSFQYCAK*SPIARSRCRYSLAS
Trigger: TGATGCTAAGGAGTACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGGCACAGTACTGGAAGGACATAGCCATTGCCCAGCGTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp CTCCTCCTCTCCACCTTCTTGCTGTGTGTCAGGGCTCTGATGCTCTaGGGAAGGTGGCTTCATCAATCGTACATCTTCACTGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLLSTFLLCVRALML*GRWLHQSYIFTAFL
Trigger: GAGAAAGGCAGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAGAGCATCAGAGCCCTGACACACAGCAAGAAGGTGGAGAGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp ATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGGGCAGGTATGAGCAGGAGTTATTGAGAGCTCGCTGCTaGGCATCCTTGATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: MNSPPRSCCVEGRYEQELLRARC*ASLILF
Trigger: GAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAA...TAACTCCTGCTCATACCTGCCCTCAACACAGCAGCTTCGGGGAGGGGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGCCAAGTGCTCCCCCATaGCTCGAAGTAGATGCCGGT +
Preference number: 5 (lower is better)
Translates to: GHQEICYRECLSDTGPVLPSAPP*LEVDAG
Trigger: ACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGG...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCGGTGGCTCTGGCTTCTaGACCACTGGAGTTTTGATG +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALGGSGF*TTGVLM
Trigger: CATCAAAACTCCAGTGGTCAAGAAGCCAGAGCCACC...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATGCAAGTTTGCCCCGCTaGCATCTCTCTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LEGLAELSPWGHVSFISHASLPR*HLSLLF
Trigger: GAAGAGGAGAGAGAGATGCAAGCGGGGCAAACTTGC...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCAGCGGTCTCTTGGTGTaGTATCTGTGGGCACATAGT +
Preference number: 5 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSSGLLV*YLWAHS
Trigger: ACTATGTGCCCACAGATACAACACCAAGAGACCGCT...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp CTGATAACAGACGTCTTTCGGAGCTGGGTACTTGGTCTGGGAGTCTaGATAGAAGGGGGTCTGCTAGGAGCATTCTTGATCACCGCAGGT +
Preference number: 5 (lower is better)
Translates to: LITDVFRSWVLGLGV*IEGGLLGAFLITAG
Trigger: ACCTGCGGTGATCAAGAATGCTCCTAGCAGACCCCCTTCTATTCAGACTCCCAGACCAAGTACCCAGCTCCGAAAGACGTCTGTTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp GAGCGTCGCTCTGGCTTCGTGCCCTCTGGCGAGGTTTCTGCCATCTaGATATCTTTTGGATTTGAGATTATGTCTAGTTCCGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ERRSGFVPSGEVSAI*ISFGFEIMSSSGSP
Trigger: TGGAGAGCCGGAACTAGACATAATCTCAAATCCAAAAGATATCCAGATGGCAGAAACCTCGCCAGAGGGCACGAAGCCAGAGCGACGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTGACTCAGGAGTTCTTTaGGCTGACTTCCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: KALQELAPLWKPSPPESFDSGVL*ADFPNW
Trigger: CCAGTTTGGGAAGTCAGCCAAAAGAACTCCTGAGTC...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCCTCACTAGATGGAGGTaGGTTCCAGTTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCLTRWR*VPVGRK
Trigger: CTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAG...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GATGGCAGAACTCAAGCAGGCACTTCCAGCCATATGTGCACAGTTCCCTCACCAATAGCTCTCCGGCGTTaGAAACGCAGCTCACTAGAT +
Preference number: 5 (lower is better)
Translates to: DGRTQAGTSSHMCTVPSPIALRR*KRSSLD
Trigger: ATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTAT...TGGTGAGGGAACTGTGCACATATGGCTGGAAGTGCCTGCTTGAGTTCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGCCACCCAGCGGTCTCTaGGTGTTGTATCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKPPSGL*VLYLWA
Trigger: TGCCCACAGATACAACACCAAGAGACCGCTGGGTGG...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp GGAGCATTCTTGATCACCGCAGGTAAAGGAGGTGACCGAGGACGCTaGGGTCTCCGTACAGGTTCTTCAATAGGTCTTGTAGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: GAFLITAGKGGDRGR*GLRTGSSIGLVVTS
Trigger: AGAAGTGACTACAAGACCTATTGAAGAACCTGTACGGAGACCTCAGCGTCCTCGGTCACCTCCTTTACCTGCGGTGATCAAGAATGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp CGCAAGCAATTTCGAAGAATCTGGACCAGGAGATCAATAGTCTCATaGCTGGGACTGGTGGCAGTGGTATCAGGCTCAATGGGAAGACCA +
Preference number: 5 (lower is better)
Translates to: RKQFRRIWTRRSIVS*LGLVAVVSGSMGRP
Trigger: TGGTCTTCCCATTGAGCCTGATACCACTGCCACCAGTCCCAGCCATGAGACTATTGATCTCCTGGTCCAGATTCTTCGAAATTGCTTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp ACCAAGATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTCTCTTGGTCTGCACCTaGTGTCCATGGATGAAGATC +
Preference number: 5 (lower is better)
Translates to: TKIKSTKSQMNSPPRSCCLLVCT*CPWMKI
Trigger: GATCTTCATCCATGGACACAAGGTGCAGACCAAGAG...ACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGATCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGCAGCAGGAGAGTCTCTaGGTCTGCACCTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRQQESL*VCTLCP
Trigger: TGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTG...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCAGCAGGAGAGTCTCTaGGTCTGCACCTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: QEICYRECLSDTGPVLITQQESL*VCTLCP
Trigger: TGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCCGCTGCTTGGCATCCTaGATCCTTTTCTTGACATCA +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALRCLAS*ILFLTS
Trigger: TGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCG...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GCACTTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCTCAGCAAAGTCCTGCTaGTTATGTGTAGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALPAICAQFPHQHFPIFCSAKSC*LCVGSR
Trigger: TCTGGAGCCTACACATAACAAGCAGGACTTTGCTGA...GCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAACCAAGTGCTCCCCCATaGCTCGAAGTAGATGCCGGT +
Preference number: 5 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKPSAPP*LEVDAG
Trigger: ACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGG...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCCCCCAAAGGAACCTTTaGCTTCTGTTCAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALPQRNL*LLFRSF
Trigger: GAAGCTTCTGAACAGAAGCAAAAGGTTCCTTTGGGG...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTACTGCTAGGAGCATTCTaGATCACCGCAGGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLLLGAF*ITAGKG
Trigger: TCCTTTACCTGCGGTGATCAAGAATGCTCCTAGCAG...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATACCTCCCGAAGGCTCTaGGAACTGGGGATTAAAGAT +
Preference number: 5 (lower is better)
Translates to: LEGLAELSPWGHVSFISHTSRRL*ELGIKD
Trigger: ATCTTTAATCCCCAGTTCCAAGAGCCTTCGGGAGGT...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp ATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTGTTGAGACCTCCCGAAGGCTCTaGGAACTGGGGATTAAAGAT +
Preference number: 5 (lower is better)
Translates to: IKSTKSQMNSPPRSCCVETSRRL*ELGIKD
Trigger: ATCTTTAATCCCCAGTTCCAAGAGCCTTCGGGAGGT...CTCAACACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp ACCAAGATCAAGTCCACCAAGTCACAAATGAACTCCCCTCCCCGAAGCTGCTGTACACTCAGCTCCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: TKIKSTKSQMNSPPRSCCTLSSF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGGAGCTGAGTGT...ACAGCAGCTTCGGGGAGGGGAGTTCATTTGTGACTTGGTGGACTTGATCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp ATAGGCAGCAGGAGAGTCTCTTGGTCTGCACCTTGTGTCCATGGATaGAGATCCTCATCCGGGGATCAATATAGAGTACAGCAGCATAGG +
Preference number: 5 (lower is better)
Translates to: IGSRRVSWSAPCVHG*RSSSGDQYRVQQHR
Trigger: CCTATGCTGCTGTACTCTATATTGATCCCCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp TCCTTCCAGTACTGTGCCAAGTGCTCCCCCATTGCTCGAAGTAGATaGCGGTACTCCTTAGCATCAGCAAAGTCCTGCTTGTTATGTGTA +
Preference number: 5 (lower is better)
Translates to: SFQYCAKCSPIARSR*RYSLASAKSCLLCV
Trigger: TACACATAACAAGCAGGACTTTGCTGATGCTAAGGAGTACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGGCACAGTACTGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp ACTTCTGTAACTTCTCCTCTGTCTCACGAAGCTTTTTCTCTGATGTaGGTAAGCTCTCCTCTGAGGCTTTTGCCCGTGAATCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: TSVTSPLSHEAFSLM*VSSPLRLLPVNQHG
Trigger: GCCGTGCTGATTCACGGGCAAAAGCCTCAGAGGAGAGCTTACGCACATCAGAGAAAAAGCTTCGTGAGACAGAGGAGAAGTTACAGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp TGGTTTTGGAAGGCTGATAACAGACGTCTTTCGGAGCTGGGTACTTaGTCTGGGAGTCTGAATAGAAGGGGGTCTGCTAGGAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: WFWKADNRRLSELGT*SGSLNRRGSARSIL
Trigger: AAGAATGCTCCTAGCAGACCCCCTTCTATTCAGACTCCCAGACCAAGTACCCAGCTCCGAAAGACGTCTGTTATCAGCCTTCCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp CTTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTTGTATCTGTaGGCACATAGTCAAACTTCACTTTCCATCGAACCGCATTCTTGC +
Preference number: 5 (lower is better)
Translates to: LHCLSPPSGLLVLYL*AHSQTSLSIEPHSC
Trigger: GCAAGAATGCGGTTCGATGGAAAGTGAAGTTTGACTATGTGCCCACAGATACAACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGTCTAAAGTACGAGCTTaGCTCTCTGCCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWSKVRA*LSASRA
Trigger: GGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAGA...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCACTTTCTCATACATCTaGATCAGGCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALTFSYI*IRRLQL
Trigger: CAACTGTAGCCGCCTGATCAAGATGTATGAGAAAGT...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGCCCCAAAGGAACCTTTaGCTTCTGTTCAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAEPQRNL*LLFRSF
Trigger: GAAGCTTCTGAACAGAAGCAAAAGGTTCCTTTGGGG...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGCATCGAACCGCATTCTaGCCCACCTCCACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWHRTAF*PTSTAV
Trigger: CACAGCTGTGGAGGTGGGCAAGAATGCGGTTCGATG...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTGAGCCCCACCTCATATaGCTTGAAGTATTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: KALQELAPLWKPSPPESFEPHLI*LEVFFQ
Trigger: CTGAAAGAATACTTCAAGCAATATGAGGTGGGGCTC...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGGCTCTCTGGAGCCCAGAGAGTACATAGTAGAAAAGCAGCAGCAAAGGCTCTCAGGAGTGCTACAATGTaGGTCCTCAACTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: GLSGAQRVHSRKAAAKALRSATM*VLNFCN
Trigger: GTTACAGAAGTTGAGGACCAACATTGTAGCACTCCT...GAGAGCCTTTGCTGCTGCTTTTCTACTATGTACTCTCTGGGCTCCAGAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATAGCTCATCATCTGTGTaGATGTCTATGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LEGLAELSPWGHVSFISHSSSSV*MSMSSC
Trigger: GCAGGAGGACATAGACATCAACACAGATGATGAGCT...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 90 bp TTGTACATCCTGGGCTTATATAGGCAGCAGGAGAGTCTCTTGGTCTaGACCTTGTGTCCATGGATGAAGATCCTCATCCGGGGATCAATA +
Preference number: 5 (lower is better)
Translates to: LYILGLYRQQESLLV*TLCPWMKILIRGSI
Trigger: TATTGATCCCCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAAGCCCAGGATGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp TGGAATTTCCATAGCTCTCCGGCGTTTGAAACGCAGCTCACTAGATaGAGGTTGGTTCCAGTTGGCAGAAAGATAGCCAAACTCATCCCA +
Preference number: 5 (lower is better)
Translates to: WNFHSSPAFETQLTR*RLVPVGRKIAKLIP
Trigger: TGGGATGAGTTTGGCTATCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTATGGAAATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 90 bp GGGAAACTTGGAGGTAAGAAATACCGCAAGCAATTTCGAAGAATCTaGACCAGGAGATCAATAGTCTCATGGCTGGGACTGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GKLGGKKYRKQFRRI*TRRSIVSWLGLVAV
Trigger: CACTGCCACCAGTCCCAGCCATGAGACTATTGATCTCCTGGTCCAGATTCTTCGAAATTGCTTGCGGTATTTCTTACCTCCAAGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGGCCATACTGCCCAATTaGAGTGGACTCAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRAILPN*SGLRSS
Trigger: AGAACTCCTGAGTCCACTCAAATTGGGCAGTATGGC...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTGCAGAGACCCCAGGACACAAGGTGGCAGCCTTGCCTTGATGGATACAAATCCCCATTATCCATGAGCTaGAGATTAAAGATGATCACC +
Preference number: 5 (lower is better)
Translates to: LQRPQDTRWQPCLDGYKSPLSMS*RLKMIT
Trigger: GGTGATCATCTTTAATCTCAAGCTCATGGATAATGG...GGATTTGTATCCATCAAGGCAAGGCTGCCACCTTGTGTCCTGGGGTCTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCTCTTGGTCTGCACCTaGTGTCCATGGATGAAGATC +
Preference number: 5 (lower is better)
Translates to: QEICYRECLSDTGPVLITLLVCT*CPWMKI
Trigger: GATCTTCATCCATGGACACAAGGTGCAGACCAAGAG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AGCTGTCTGGATACTGTCACATCCAAGATGACTGACAGCTGCTCAGGCAGCCTAACTTTCTCATACATCTaGATCAGGCGGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: SCLDTVTSKMTDSCSGSLTFSYI*IRRLQL
Trigger: CAACTGTAGCCGCCTGATCAAGATGTATGAGAAAGT...TAGGCTGCCTGAGCAGCTGTCAGTCATCTTGGATGTGACAGTATCCAGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGTGTCTGAGAGCTCATTaGCTTCCTTCTTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAECLRAH*LPSFPP
Trigger: AGGAGGAAAAGAAGGAAGCAAATGAGCTCTCAGACA...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGAGCGGTCTCTTGGTGTaGTATCTGTGGGCACATAGT +
Preference number: 5 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWSGLLV*YLWAHS
Trigger: ACTATGTGCCCACAGATACAACACCAAGAGACCGCT...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCGACAGCCATCAGATGAAGACACTCAGCTCCTTCTaGGAGATGGGGAAACTTGGA +
Preference number: 5 (lower is better)
Translates to: SVKSWDWNQNSSDSHQMKTLSSF*EMGKLG
Trigger: TCCAAGTTTCCCCATCTCCAAGAAGGAGCTGAGTGT...CTTCATCTGATGGCTGTCGGAAGAATTCTGGTTCCAGTCCCAACTCTTCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TTCCAGCCATATGTGCACAGTTCCCTCACCAACACTTCCCCATCTTCTGCAGAGAGGAGTGCTACAATGTaGGTCCTCAACTTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: FQPYVHSSLTNTSPSSAERSATM*VLNFCN
Trigger: GTTACAGAAGTTGAGGACCAACATTGTAGCACTCCT...CTCTGCAGAAGATGGGGAAGTGTTGGTGAGGGAACTGTGCACATATGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp CAGGTGGGCAATGGGACAATTACTTCATCAATGCCTTCTTCCTCATaGAAGGTGCGAGACAAGAAGAGGCAGGTCATGGTATCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QVGNGTITSSMPSSS*KVRDKKRQVMVSSF
Trigger: GAAGGAAGATACCATGACCTGCCTCTTCTTGTCTCGCACCTTTCATGAGGAAGAAGGCATTGATGAAGTAATTGTCCCATTGCCCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp AGGGTTCATGGAGCAAACCCAAGTATCAGGGTAATCTGTTTCTACTaGACTCAGCTGGAAGGGGAGAGTCCTCCATTTCAGACACAGATC +
Preference number: 5 (lower is better)
Translates to: RVHGANPSIRVICFY*TQLEGESPPFQTQI
Trigger: GATCTGTGTCTGAAATGGAGGACTCTCCCCTTCCAGCTGAGTTCAGTAGAAACAGATTACCCTGATACTTGGGTTTGCTCCATGAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAGGCTCTCCAGGAACTAGCACCACTGTGGAAGCCTTCTCCTCCAGAGAGCTTTCCATTATCCATGAGCTaGAGATTAAAGATGATCACC +
Preference number: 5 (lower is better)
Translates to: KALQELAPLWKPSPPESFPLSMS*RLKMIT
Trigger: GGTGATCATCTTTAATCTCAAGCTCATGGATAATGG...AAAGCTCTCTGGAGGAGAAGGCTTCCACAGTGGTGCTAGTTCCTGGAGAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CTTGAGGGTCTTGCAGAGCTGAGTCCCTGGGGCCATGTATCTTTCATATCCCATTCCTTGATCCTTTTCTaGACATCAGCTTCTCTACGA +
Preference number: 5 (lower is better)
Translates to: LEGLAELSPWGHVSFISHSLILF*TSASLR
Trigger: TCGTAGAGAAGCTGATGTCAAGAAAAGGATCAAGGA...ATGGGATATGAAAGATACATGGCCCCAGGGACTCAGCTCTGCAAGACCCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGCGCTGCTTGGCATCCTaGATCCTTTTCTTGACATCA +
Preference number: 5 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWRCLAS*ILFLTS
Trigger: TGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCG...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTCAGCAAAGTCCTGCTaGTTATGTGTAGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRSAKSC*LCVGSR
Trigger: TCTGGAGCCTACACATAACAAGCAGGACTTTGCTGA...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTCCTTAGAGCCTCTCCAACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGAACTCATCCCAAAACTaGATGATTCCACGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLRASPTSGWCFLHPMLRNSSQN*MIPRWA
Trigger: TGCCCAGCGTGGAATCATCAAGTTTTGGGATGAGTT...CCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTTGGAGAGGCTCTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGGGTGGCTCTGGCTTCTaGACCACTGGAGTTTTGATG +
Preference number: 5 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWGGSGF*TTGVLM
Trigger: CATCAAAACTCCAGTGGTCAAGAAGCCAGAGCCACC...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GGACACCAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGTGTCTGAGAGCTCATTaGCTTCCTTCTTTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GHQEICYRECLSDTGPVLCLRAH*LPSFPP
Trigger: AGGAGGAAAAGAAGGAAGCAAATGAGCTCTCAGACA...CAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCAGCTCATCATCTGTGTaGATGTCTATGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QEICYRECLSDTGPVLITSSSSV*MSMSSC
Trigger: GCAGGAGGACATAGACATCAACACAGATGATGAGCT...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp TGCTTGAGCTTGGATAGTGTGGTTGACTCAGGAAATGGCTCCTCCAGTAACAAAAACTCATCCCAAAACTaGATGATTCCACGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: CLSLDSVVDSGNGSSSNKNSSQN*MIPRWA
Trigger: TGCCCAGCGTGGAATCATCAAGTTTTGGGATGAGTT...TTTGTTACTGGAGGAGCCATTTCCTGAGTCAACCACACTATCCAAGCTCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 90 bp GTGCTACATGCTCTGCTTTCTTCACTTCCTGTTCTGCCCGAGTCTTaGAACGACTTGATGTATACTTGTACATCCTGGGCTTATATAGGC +
Preference number: 5 (lower is better)
Translates to: VLHALLSSLPVLPES*NDLMYTCTSWAYIG
Trigger: GCCTATATAAGCCCAGGATGTACAAGTATACATCAAGTCGTTTCAAGACTCGGGCAGAACAGGAAGTGAAGAAAGCAGAGCATGTAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AACTTCAGGATGGTGCTTTCTTCATCCTATGTTGAGGTGCCAGGAGCTGAATGGTCCTTGATCCTTTTCTaGACATCAGCTTCTCTACGA +
Preference number: 5 (lower is better)
Translates to: NFRMVLSSSYVEVPGAEWSLILF*TSASLR
Trigger: TCGTAGAGAAGCTGATGTCAAGAAAAGGATCAAGGA...CCATTCAGCTCCTGGCACCTCAACATAGGATGAAGAAAGCACCATCCTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCTTGAGAGCTCGCTGCTaGGCATCCTTGATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: KISLEQECEELGLEPEFFLRARC*ASLILF
Trigger: GAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAA...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCATAGCTCTCCGGCGTTaGAAACGCAGCTCACTAGAT +
Preference number: 5 (lower is better)
Translates to: KISLEQECEELGLEPEFFIALRR*KRSSLD
Trigger: ATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTAT...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAAATCAGTCTTGAACAGGAGTGTGAAGAGTTGGGACTGGAACCAGAATTCTTCCTGCTAGGAGCATTCTaGATCACCGCAGGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: KISLEQECEELGLEPEFFLLGAF*ITAGKG
Trigger: TCCTTTACCTGCGGTGATCAAGAATGCTCCTAGCAG...GAAGAATTCTGGTTCCAGTCCCAACTCTTCACACTCCTGTTCAAGACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp CAGGAGATCTGTTACAGGGAGTGTCTTTCTGATACTGGGCCTGTTTTGATCACCCCCACCTCATATTGCTaGAAGTATTCTTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: QEICYRECLSDTGPVLITPTSYC*KYSFRG
Trigger: TCCTCTGAAAGAATACTTCAAGCAATATGAGGTGGG...GGTGATCAAAACAGGCCCAGTATCAGAAAGACACTCCCTGTAACAGATCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGCCATACTGCCCAATTaGAGTGGACTCAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTAILPN*SGLRSS
Trigger: AGAACTCCTGAGTCCACTCAAATTGGGCAGTATGGC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTTCCTTCACAGCAAGTTaGCCCCGCTTGCATCTCTCT +
Preference number: 5 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSSFTAS*PRLHLS
Trigger: AGAGAGATGCAAGCGGGGCAAACTTGCTGTGAAGGA...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp AAGTGCACCAACTTAAAACCCATCTATTGGAGAATGTTCCAGAGAAGAACTTCTGACTCAGGAGTTCTTTaGGCTGACTTCCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: KCTNLKPIYWRMFQRRTSDSGVL*ADFPNW
Trigger: CCAGTTTGGGAAGTCAGCCAAAAGAACTCCTGAGTC...AGAAGTTCTTCTCTGGAACATTCTCCAATAGATGGGTTTTAAGTTGGTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGCAAACTTCTCCACATaGTCTGTGATAGGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTANFST*SVIGSR
Trigger: ACGGGAACCTATCACAGACAATGTGGAGAAGTTTGC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GTAGGTGGCATATTGGGAAATTTGAGCCTTAAGAAACATCTCCAAGCTGTCTGGCCCACCTCATATTGCTaGAAGTATTCTTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VGGILGNLSLKKHLQAVWPTSYC*KYSFRG
Trigger: TCCTCTGAAAGAATACTTCAAGCAATATGAGGTGGG...CCAGACAGCTTGGAGATGTTTCTTAAGGCTCAAATTTCCCAATATGCCACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS-3UTR CAA 90 bp GAAGATTCAAAGAATCTCCTTCCCAAAGCACAAATGTCTCACATGACTCAAACCGAGCCCCACCTCATATaGCTTGAAGTATTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: EDSKNLLPKAQMSHMTQTEPHLI*LEVFFQ
Trigger: CTGAAAGAATACTTCAAGCAATATGAGGTGGGGCTC...GGTTTGAGTCATGTGAGACATTTGTGCTTTGGGAAGGAGATTCTTTGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp CCATCAGAGGTGGAAGGCTCAGGCAAGGCCACAGCCTaGCGGGCCACCATAGCCTCCTCCTCCTCTCCACCT +
Preference number: 6 (lower is better)
Translates to: PSEVEGSGKATA*RATIASSSSPP
Trigger: AGGTGGAGAGGAGGAGGAGGCTATGGTGGCCCGGCAGGCTGTGGCCTTGCCTGAGCCTTCCACCTCTGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp CCGGGCCACCATAGCCTCCTCCTCCTCTCCACCTTCTaGCTGTGTGTCAGGGCTCTGATGCTCTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: PGHHSLLLLSTF*LCVRALMLWGR
Trigger: CCTTCCCCAGAGCATCAGAGCCCTGACACACAGCAAGAAGGTGGAGAGGAGGAGGAGGCTATGGTGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp GTGTGTGCACAGGAGGGGTGGGTCGGGGTACAGTCTTaGTGGGAGGGTTTGCAGGCTTTCGAGGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: VCAQEGWVGVQS*WEGLQAFEVPQ
Trigger: CTGAGGCACCTCGAAAGCCTGCAAACCCTCCCATCAAGACTGTACCCCGACCCACCCCTCCTGTGCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp GAGTACAGCAGCATAGGCTCGGAAGGAGCGTCGCTCTaGCTTCGTGCCCTCTGGCGAGGTTTCTGCCATCTG +
Preference number: 6 (lower is better)
Translates to: EYSSIGSEGASL*LRALWRGFCHL
Trigger: CAGATGGCAGAAACCTCGCCAGAGGGCACGAAGCCAGAGCGACGCTCCTTCCGAGCCTATGCTGCTGTACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp GGTGTGTGCACAGGAGGGGTGGGTCGGGGTACAGTCTaGATGGGAGGGTTTGCAGGCTTTCGAGGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: GVCTGGVGRGTV*MGGFAGFRGAS
Trigger: TGAGGCACCTCGAAAGCCTGCAAACCCTCCCATCAAGACTGTACCCCGACCCACCCCTCCTGTGCACACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp CATGGCTGGGACTGGTGGCAGTGGTATCAGGCTCAATaGGAAGACCATCAGAGGTGGAAGGCTCAGGCAAGG +
Preference number: 6 (lower is better)
Translates to: HGWDWWQWYQAQ*EDHQRWKAQAR
Trigger: CCTTGCCTGAGCCTTCCACCTCTGATGGTCTTCCCATTGAGCCTGATACCACTGCCACCAGTCCCAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp GCTTCTCTACGAAGGGTGATGGCTGTATTCTGGACCTaGCGCAACATCACCCTGGAGTCCCGTGTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ASLRRVMAVFWT*RNITLESRVRS
Trigger: AGACCTGACACGGGACTCCAGGGTGATGTTGCGGCAGGTCCAGAATACAGCCATCACCCTTCGTAGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp AGACTCCGCTTCCGACCTGAGGTTGCCACGGACTGTTaGACAGGTGGCTCTGGCTTCTTGACCACTGGAGTT +
Preference number: 6 (lower is better)
Translates to: RLRFRPEVATDC*TGGSGFLTTGV
Trigger: AACTCCAGTGGTCAAGAAGCCAGAGCCACCTGTCAAACAGTCCGTGGCAACCTCAGGTCGGAAGCGGAGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp TCCCGTGTCAGGTCTCCACCCATGCGTACTTCTAAAGTACGAGCTTaGCTCTCTGCCTCCCGGGCCTTCTCTTCAGCAATCCGTGCTACA +
Preference number: 6 (lower is better)
Translates to: SRVRSPPMRTSKVRA*LSASRAFSSAIRAT
Trigger: TGTAGCACGGATTGCTGAAGAGAAGGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAGAAGTACGCATGGGTGGAGACCTGACACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp GAGACTGCAAGACTCCGCTTCCGACCTGAGGTTGCCACGGACTGTTaGACAGGTGGCTCTGGCTTCTTGACCACTGGAGTTTTGATGGCT +
Preference number: 6 (lower is better)
Translates to: ETARLRFRPEVATDC*TGGSGFLTTGVLMA
Trigger: AGCCATCAAAACTCCAGTGGTCAAGAAGCCAGAGCCACCTGTCAAACAGTCCGTGGCAACCTCAGGTCGGAAGCGGAGTCTTGCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp TGGGCAATGGCTATGTCCTTCCAGTACTGTGCCAAGTaGTCCCCCATTGCTCGAAGTAGATGCCGGTACTCC +
Preference number: 6 (lower is better)
Translates to: WAMAMSFQYCAK*SPIARSRCRYS
Trigger: GGAGTACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGGCACAGTACTGGAAGGACATAGCCATTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp ACATCAGCTTCTCTACGAAGGGTGATGGCTGTATTCTaGACCTGCCGCAACATCACCCTGGAGTCCCGTGTC +
Preference number: 6 (lower is better)
Translates to: TSASLRRVMAVF*TCRNITLESRV
Trigger: GACACGGGACTCCAGGGTGATGTTGCGGCAGGTCCAGAATACAGCCATCACCCTTCGTAGAGAAGCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp GGAGGGTTTGCAGGCTTTCGAGGTGCCTCAGTTGGCTaGAGTAGCCTAGAAGTACTAGTTTCTCCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: GGFAGFRGASVG*SSLEVLVSPRA
Trigger: AGCCCGAGGAGAAACTAGTACTTCTAGGCTACTCCAGCCAACTGAGGCACCTCGAAAGCCTGCAAACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp TCTGGCTTCTTGACCACTGGAGTTTTGATGGCTTTTTaGGCAGGGACCTCCCGAAGGCTCTTGGAACTGGGG +
Preference number: 6 (lower is better)
Translates to: SGFLTTGVLMAF*AGTSRRLLELG
Trigger: CCCCAGTTCCAAGAGCCTTCGGGAGGTCCCTGCTCAAAAAGCCATCAAAACTCCAGTGGTCAAGAAGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp CTTTTTGAGCAGGGACCTCCCGAAGGCTCTTGGAACTaGGGATTAAAGATAGTGGGGGTGTGTGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: LFEQGPPEGSWN*GLKIVGVCAQE
Trigger: CTCCTGTGCACACACCCCCACTATCTTTAATCCCCAGTTCCAAGAGCCTTCGGGAGGTCCCTGCTCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp GGACTGTTTGACAGGTGGCTCTGGCTTCTTGACCACTaGAGTTTTGATGGCTTTTTGAGCAGGGACCTCCCG +
Preference number: 6 (lower is better)
Translates to: GLFDRWLWLLDH*SFDGFLSRDLP
Trigger: CGGGAGGTCCCTGCTCAAAAAGCCATCAAAACTCCAGTGGTCAAGAAGCCAGAGCCACCTGTCAAACAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp CTCTGGCTTCTTGACCACTGGAGTTTTGATGGCTTTTaGAGCAGGGACCTCCCGAAGGCTCTTGGAACTGGG +
Preference number: 6 (lower is better)
Translates to: LWLLDHWSFDGF*SRDLPKALGTG
Trigger: CCCAGTTCCAAGAGCCTTCGGGAGGTCCCTGCTCAAAAAGCCATCAAAACTCCAGTGGTCAAGAAGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp GACGTCTTTCGGAGCTGGGTACTTGGTCTGGGAGTCTaGATAGAAGGGGGTCTGCTAGGAGCATTCTTGATC +
Preference number: 6 (lower is better)
Translates to: DVFRSWVLGLGV*IEGGLLGAFLI
Trigger: GATCAAGAATGCTCCTAGCAGACCCCCTTCTATTCAGACTCCCAGACCAAGTACCCAGCTCCGAAAGACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp CTGGGCTTATATAGGCAGCAGGAGAGTCTCTTGGTCTaGACCTTGTGTCCATGGATGAAGATCCTCATCCGG +
Preference number: 6 (lower is better)
Translates to: LGLYRQQESLLV*TLCPWMKILIR
Trigger: CCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp TACTGTGCCAAGTGCTCCCCCATTGCTCGAAGTAGATaGCGGTACTCCTTAGCATCAGCAAAGTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: YCAKCSPIARSR*RYSLASAKSCL
Trigger: CAAGCAGGACTTTGCTGATGCTAAGGAGTACCGGCATCTACTTCGAGCAATGGGGGAGCACTTGGCACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp AAGGCTGATAACAGACGTCTTTCGGAGCTGGGTACTTaGTCTGGGAGTCTGAATAGAAGGGGGTCTGCTAGG +
Preference number: 6 (lower is better)
Translates to: KADNRRLSELGT*SGSLNRRGSAR
Trigger: CCTAGCAGACCCCCTTCTATTCAGACTCCCAGACCAAGTACCCAGCTCCGAAAGACGTCTGTTATCAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp ACTAGTTTCTCCTCGGGCTGCTGTAGTGGGTGGTTTTaGAAGGCTGATAACAGACGTCTTTCGGAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: TSFSSGCCSGWF*KADNRRLSELG
Trigger: ACCCAGCTCCGAAAGACGTCTGTTATCAGCCTTCCAAAACCACCCACTACAGCAGCCCGAGGAGAAACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp TTGATCACCGCAGGTAAAGGAGGTGACCGAGGACGCTaGGGTCTCCGTACAGGTTCTTCAATAGGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: LITAGKGGDRGR*GLRTGSSIGLV
Trigger: TACAAGACCTATTGAAGAACCTGTACGGAGACCTCAGCGTCCTCGGTCACCTCCTTTACCTGCGGTGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp CTGGGGAAGGTGGCTTCATCAATCGTACATCTTCACTaGCTTTCTCCACCCAGCGGTCTCTTGGTGTTGTAT +
Preference number: 6 (lower is better)
Translates to: LGKVASSIVHLH*LSPPSGLLVLY
Trigger: ATACAACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp TCCACCTTCTTGCTGTGTGTCAGGGCTCTGATGCTCTaGGGAAGGTGGCTTCATCAATCGTACATCTTCACT +
Preference number: 6 (lower is better)
Translates to: STFLLCVRALML*GRWLHQSYIFT
Trigger: AGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAGAGCATCAGAGCCCTGACACACAGCAAGAAGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TTTTCTCTGATGTGCGTAAGCTCTCCTCTGAGGCTTTaGCCCGTGAATCAGCACGGCTTTGGTAGGAATGGC +
Preference number: 6 (lower is better)
Translates to: FSLMCVSSPLRL*PVNQHGFGRNG
Trigger: GCCATTCCTACCAAAGCCGTGCTGATTCACGGGCAAAAGCCTCAGAGGAGAGCTTACGCACATCAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp GTATACTTGTACATCCTGGGCTTATATAGGCAGCAGGAGAGTCTCTaGGTCTGCACCTTGTGTCCATGGATGAAGATCCTCATCCGGGGA +
Preference number: 6 (lower is better)
Translates to: VYLYILGLYRQQESL*VCTLCPWMKILIRG
Trigger: TCCCCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAAGCCCAGGATGTACAAGTATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp CATAGCTCTCCGGCGTTTGAAACGCAGCTCACTAGATaGAGGTTGGTTCCAGTTGGCAGAAAGATAGCCAAA +
Preference number: 6 (lower is better)
Translates to: HSSPAFETQLTR*RLVPVGRKIAK
Trigger: TTTGGCTATCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp GCAATTTCTTCAGGTCAGCTTGTGAGCGGATGGGCGTaGTTTTCTGAAGAGCTTCTAGCTTTTCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AISSGQLVSGWA*FSEELLAFPAA
Trigger: AGCAGCAGGAAAAGCTAGAAGCTCTTCAGAAAACCACGCCCATCCGCTCACAAGCTGACCTGAAGAAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp AGAAGTACTAGTTTCTCCTCGGGCTGCTGTAGTGGGTaGTTTTGGAAGGCTGATAACAGACGTCTTTCGGAG +
Preference number: 6 (lower is better)
Translates to: RSTSFSSGCCSG*FWKADNRRLSE
Trigger: CTCCGAAAGACGTCTGTTATCAGCCTTCCAAAACCACCCACTACAGCAGCCCGAGGAGAAACTAGTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp CTTTCTCCACCCAGCGGTCTCTTGGTGTTGTATCTGTaGGCACATAGTCAAACTTCACTTTCCATCGAACCG +
Preference number: 6 (lower is better)
Translates to: LSPPSGLLVLYL*AHSQTSLSIEP
Trigger: CGGTTCGATGGAAAGTGAAGTTTGACTATGTGCCCACAGATACAACACCAAGAGACCGCTGGGTGGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp TTTCGAAGAATCTGGACCAGGAGATCAATAGTCTCATaGCTGGGACTGGTGGCAGTGGTATCAGGCTCAATG +
Preference number: 6 (lower is better)
Translates to: FRRIWTRRSIVS*LGLVAVVSGSM
Trigger: CATTGAGCCTGATACCACTGCCACCAGTCCCAGCCATGAGACTATTGATCTCCTGGTCCAGATTCTTCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TTATATAGGCAGCAGGAGAGTCTCTTGGTCTGCACCTaGTGTCCATGGATGAAGATCCTCATCCGGGGATCA +
Preference number: 6 (lower is better)
Translates to: LYRQQESLLVCT*CPWMKILIRGS
Trigger: TGATCCCCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TACATCCTGGGCTTATATAGGCAGCAGGAGAGTCTCTaGGTCTGCACCTTGTGTCCATGGATGAAGATCCTC +
Preference number: 6 (lower is better)
Translates to: YILGLYRQQESL*VCTLCPWMKIL
Trigger: GAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAAGCCCAGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TCTCCGGCGTTTGAAACGCAGCTCACTAGATGGAGGTaGGTTCCAGTTGGCAGAAAGATAGCCAAACTCATC +
Preference number: 6 (lower is better)
Translates to: SPAFETQLTRWR*VPVGRKIAKLI
Trigger: GATGAGTTTGGCTATCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TGGATAGTGGTTGGAATTTCCATAGCTCTCCGGCGTTaGAAACGCAGCTCACTAGATGGAGGTTGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: WIVVGISIALRR*KRSSLDGGWFQ
Trigger: CTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTATGGAAATTCCAACCACTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp CTTCACTGCCTTTCTCCACCCAGCGGTCTCTTGGTGTaGTATCTGTGGGCACATAGTCAAACTTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: LHCLSPPSGLLV*YLWAHSQTSLS
Trigger: GGAAAGTGAAGTTTGACTATGTGCCCACAGATACAACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp TTGGGTTCTTTGAGAGCTCGCTGCTTGGCATCCTTGATCCTTTTCTaGACATCAGCTTCTCTACGAAGGGTGATGGCTGTATTCTGGACC +
Preference number: 6 (lower is better)
Translates to: LGSLRARCLASLILF*TSASLRRVMAVFWT
Trigger: GGTCCAGAATACAGCCATCACCCTTCGTAGAGAAGCTGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp AGATCACACTGGATAGTGGTTGGAATTTCCATAGCTCTCCGGCGTTaGAAACGCAGCTCACTAGATGGAGGTTGGTTCCAGTTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: RSHWIVVGISIALRR*KRSSLDGGWFQLAE
Trigger: TTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTATGGAAATTCCAACCACTATCCAGTGTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp AGGAGAGTCTCTTGGTCTGCACCTTGTGTCCATGGATaGAGATCCTCATCCGGGGATCAATATAGAGTACAG +
Preference number: 6 (lower is better)
Translates to: RRVSWSAPCVHG*RSSSGDQYRVQ
Trigger: CTGTACTCTATATTGATCCCCGGATGAGGATCTTCATCCATGGACACAAGGTGCAGACCAAGAGACTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp CCTTCCCAATCCGCATTGAGCCCGATTTTAATCCATTaGCATACTGCCCAATTTGAGTGGACTCAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: PSQSALSPILIH*HTAQFEWTQEF
Trigger: GAACTCCTGAGTCCACTCAAATTGGGCAGTATGGCAATGGATTAAAATCGGGCTCAATGCGGATTGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp ACTTCTCCTCTGTCTCACGAAGCTTTTTCTCTGATGTaGGTAAGCTCTCCTCTGAGGCTTTTGCCCGTGAAT +
Preference number: 6 (lower is better)
Translates to: TSPLSHEAFSLM*VSSPLRLLPVN
Trigger: ATTCACGGGCAAAAGCCTCAGAGGAGAGCTTACGCACATCAGAGAAAAAGCTTCGTGAGACAGAGGAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp GTGGACTCAGGAGTTCTTTTGGCTGACTTCCCAAACTaGATCACACTAGCAGCATCACTTGGATCCATTCCT +
Preference number: 6 (lower is better)
Translates to: VDSGVLLADFPN*ITLAASLGSIP
Trigger: AGGAATGGATCCAAGTGATGCTGCTAGTGTGATCCAGTTTGGGAAGTCAGCCAAAAGAACTCCTGAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
ENSMUST00000140242.8
CDS CCA 72 bp CTAAGGGCAATTTCTTCAGGTCAGCTTGTGAGCGGATaGGCGTGGTTTTCTGAAGAGCTTCTAGCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: LRAISSGQLVSG*AWFSEELLAFP
Trigger: AGGAAAAGCTAGAAGCTCTTCAGAAAACCACGCCCATCCGCTCACAAGCTGACCTGAAGAAATTGCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CCA 72 bp TACATCTTCACTGCCTTTCTCCACCCAGCGGTCTCTTaGTGTTGTATCTGTGGGCACATAGTCAAACTTCAC +
Preference number: 6 (lower is better)
Translates to: YIFTAFLHPAVS*CCICGHIVKLH
Trigger: GTGAAGTTTGACTATGTGCCCACAGATACAACACCAAGAGACCGCTGGGTGGAGAAAGGCAGTGAAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp TTCCATAGCTCTCCGGCGTTTGAAACGCAGCTCACTAGATGGAGGTaGGTTCCAGTTGGCAGAAAGATAGCCAAACTCATCCCAAAACTT +
Preference number: 6 (lower is better)
Translates to: FHSSPAFETQLTRWR*VPVGRKIAKLIPKL
Trigger: AAGTTTTGGGATGAGTTTGGCTATCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp GCTCTGCTTTCTTCACTTCCTGTTCTGCCCGAGTCTTaGAACGACTTGATGTATACTTGTACATCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: ALLSSLPVLPES*NDLMYTCTSWA
Trigger: AGCCCAGGATGTACAAGTATACATCAAGTCGTTTCAAGACTCGGGCAGAACAGGAAGTGAAGAAAGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp TGCTCTGCTTTCTTCACTTCCTGTTCTGCCCGAGTCTaGAAACGACTTGATGTATACTTGTACATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: CSAFFTSCSARV*KRLDVYLYILG
Trigger: GCCCAGGATGTACAAGTATACATCAAGTCGTTTCAAGACTCGGGCAGAACAGGAAGTGAAGAAAGCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp CAGTGTTCCACTATTCCCAGGAATCTTCATGAACTGGTTCATCACTaGCTCCTCAGTGTGGAAGGGAGAGTATTTGTAGACAAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: QCSTIPRNLHELVHH*LLSVEGRVFVDKLC
Trigger: ACAGAGCTTGTCTACAAATACTCTCCCTTCCACACTGAGGAGCAAGTGATGAACCAGTTCATGAAGATTCCTGGGAATAGTGGAACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp CGTGCTACATGCTCTGCTTTCTTCACTTCCTGTTCTGCCCGAGTCTaGAAACGACTTGATGTATACTTGTACATCCTGGGCTTATATAGG +
Preference number: 6 (lower is better)
Translates to: RATCSAFFTSCSARV*KRLDVYLYILGLYR
Trigger: CCTATATAAGCCCAGGATGTACAAGTATACATCAAGTCGTTTCAAGACTCGGGCAGAACAGGAAGTGAAGAAAGCAGAGCATGTAGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp AAATTAAGTTCCTTGGGTTCTTTGAGAGCTCGCTGCTTGGCATCCTaGATCCTTTTCTTGACATCAGCTTCTCTACGAAGGGTGATGGCT +
Preference number: 6 (lower is better)
Translates to: KLSSLGSLRARCLAS*ILFLTSASLRRVMA
Trigger: AGCCATCACCCTTCGTAGAGAAGCTGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGAACCCAAGGAACTTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp TTGATGTCTATGTCCTCCTGCACTTTTTGCAGGAGTGCTACAATGTaGGTCCTCAACTTCTGTAACTTCTCCTCTGTCTCACGAAGCTTT +
Preference number: 6 (lower is better)
Translates to: LMSMSSCTFCRSATM*VLNFCNFSSVSRSF
Trigger: AAAGCTTCGTGAGACAGAGGAGAAGTTACAGAAGTTGAGGACCAACATTGTAGCACTCCTGCAAAAAGTGCAGGAGGACATAGACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS TCA 72 bp AATGGGACAATTACTTCATCAATGCCTTCTTCCTCATaGAAGGTGCGAGACAAGAAGAGGCAGGTCATGGTA +
Preference number: 6 (lower is better)
Translates to: NGTITSSMPSSS*KVRDKKRQVMV
Trigger: TACCATGACCTGCCTCTTCTTGTCTCGCACCTTTCATGAGGAAGAAGGCATTGATGAAGTAATTGTCCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp ACTATTCCCAGGAATCTTCATGAACTGGTTCATCACTaGCTCCTCAGTGTGGAAGGGAGAGTATTTGTAGAC +
Preference number: 6 (lower is better)
Translates to: TIPRNLHELVHH*LLSVEGRVFVD
Trigger: GTCTACAAATACTCTCCCTTCCACACTGAGGAGCAAGTGATGAACCAGTTCATGAAGATTCCTGGGAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp CTGGCGAGGTTTCTGCCATCTGGATATCTTTTGGATTaGAGATTATGTCTAGTTCCGGCTCTCCATTATCCA +
Preference number: 6 (lower is better)
Translates to: LARFLPSGYLLD*RLCLVPALHYP
Trigger: TGGATAATGGAGAGCCGGAACTAGACATAATCTCAAATCCAAAAGATATCCAGATGGCAGAAACCTCGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS GCA 72 bp ACAAAATTAAGTTCCTTGGGTTCTTTGAGAGCTCGCTaGTTGGCATCCTTGATCCTTTTCTTGACATCAGCT +
Preference number: 6 (lower is better)
Translates to: TKLSSLGSLRAR*LASLILFLTSA
Trigger: AGCTGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGAACCCAAGGAACTTAATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp AAATTAAGTTCCTTGGGTTCTTTGAGAGCTCGCTGCTaGGCATCCTTGATCCTTTTCTTGACATCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: KLSSLGSLRARC*ASLILFLTSAS
Trigger: AGAAGCTGATGTCAAGAAAAGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGAACCCAAGGAACTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 90 bp GGATTTGAGATTATGTCTAGTTCCGGCTCTCCATTATCCATGAGCTaGAGATTAAAGATGATCACCAGTGTTCCACTATTCCCAGGAATC +
Preference number: 6 (lower is better)
Translates to: GFEIMSSSGSPLSMS*RLKMITSVPLFPGI
Trigger: GATTCCTGGGAATAGTGGAACACTGGTGATCATCTTTAATCTCAAGCTCATGGATAATGGAGAGCCGGAACTAGACATAATCTCAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5
CDS CAA 72 bp ATTATGTCTAGTTCCGGCTCTCCATTATCCATGAGCTaGAGATTAAAGATGATCACCAGTGTTCCACTATTC +
Preference number: 6 (lower is better)
Translates to: IMSSSGSPLSMS*RLKMITSVPLF
Trigger: GAATAGTGGAACACTGGTGATCATCTTTAATCTCAAGCTCATGGATAATGGAGAGCCGGAACTAGACATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093389.9
ENSMUST00000096441.5