Pregenerated sensors for MORC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022652Ensembl transcript IDs: ENSMUST00000023330.8
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTTACAGCCCCGGCATCTCTTGCGTTGTCCAGCAACTCAGCCAGTaGTCCAAAGAGGAAACTGTGTGTTGTGGAATTCGCGTGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: SYSPGISCVVQQLSQ*SKEETVCCGIRVDE Trigger: TTCATCCACGCGAATTCCACAACACACAGTTTCCTCTTTGGAGCACTGGCTGAGTTGCTGGACAACGCAAGAGATGCCGGGGCTGTAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | TGGCTTCTTTGCATGAACGAAAGCTTAACAGATGAGGGACTGCCCTaGGTCAGGTCTGCCCCTGAAGGCTGGATTCTCCCAAGTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: WLLCMNESLTDEGLP*VRSAPEGWILPSLD Trigger: ATCCAAACTTGGGAGAATCCAGCCTTCAGGGGCAGACCTGACTCAGGGCAGTCCCTCATCTGTTAAGCTTTCGTTCATGCAAAGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | GCTGAAGTTTCTGCAGCAGCAAGGCCAGCTTTGCACGAAGGTCACTaGGTTTCTCCTCAGTCCTCTTCCTTTTCAGTTCACACTGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: AEVSAAARPALHEGH*VSPQSSSFSVHTVP Trigger: TGGGACAGTGTGAACTGAAAAGGAAGAGGACTGAGGAGAAACTCAGTGACCTTCGTGCAAAGCTGGCCTTGCTGCTGCAGAAACTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 90 bp | CTTCTGTTCACGGTGCCCAGTGGGATAGAAGGCAGGCGCTCTATCTaGTTACAGCTGTTTTCCAGGTTGTTGGGATTACTGGCACAAATC | + |
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Preference number: 5 (lower is better) Translates to: LLFTVPSGIEGRRSI*LQLFSRLLGLLAQI Trigger: GATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCTGCCTTCTATCCCACTGGGCACCGTGAACAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | TTTCATCCGGGGTTCAAAATACAGAACAGCTGTGTAGGCTCTGAATaGCCGTCTCTCTGGAATTTCCTCCGGAGCCTCGGCCATCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: FHPGFKIQNSCVGSE*PSLWNFLRSLGHQY Trigger: ATACTGATGGCCGAGGCTCCGGAGGAAATTCCAGAGAGACGGTCATTCAGAGCCTACACAGCTGTTCTGTATTTTGAACCCCGGATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | ACTTCCTCCTCTTCTTCTTGTTTCAGTGAGACCTTGGTGCTGCTTTaGTCCCAAACCATGGTCACAGTTGGATCTCTGCTGCTAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: TSSSSSCFSETLVLL*SQTMVTVGSLLLAT Trigger: CGTGGCTAGCAGCAGAGATCCAACTGTGACCATGGTTTGGGATCAAAGCAGCACCAAGGTCTCACTGAAACAAGAAGAAGAGGAGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | GTCTGGCTTTATGAGGGGAACTTCCTCCTCTTCTTCTTGTTTCAGTaGGACCTTGGTGCTGCTTTGATCCCAAACCATGGTCACAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: VWLYEGNFLLFFLFQ*DLGAALIPNHGHSW Trigger: CCAACTGTGACCATGGTTTGGGATCAAAGCAGCACCAAGGTCTCACTGAAACAAGAAGAAGAGGAGGAAGTTCCCCTCATAAAGCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 90 bp | TCTTTGCCGATTCTCATGGAGCCGCTCTTAAGCCCGTTACCATATTaGCCGATGAACTTCAAGGTCGACAAGCGTTTCTTGGATGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLPILMEPLLSPLPY*PMNFKVDKRFLDVP Trigger: TGGAACATCCAAGAAACGCTTGTCGACCTTGAAGTTCATCGGGCAATATGGTAACGGGCTTAAGAGCGGCTCCATGAGAATCGGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | CAGGAAACACAACATGAATCCTCCCTGCAGTGTTTCATTATCCACTaGAAACACATCGAGTCTTACAGCCCCGGCATCTCTTGCGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: QETQHESSLQCFIIH*KHIESYSPGISCVV Trigger: GACAACGCAAGAGATGCCGGGGCTGTAAGACTCGATGTGTTTTCAGTGGATAATGAAACACTGCAGGGAGGATTCATGTTGTGTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 90 bp | GTTCTTGCTTTCCTTAGGGCCCTCTGTTTCTGGCGAAGACTTTTATaGTTTGTGTCCACGTCTTGCAGAGCTTTCTGTAATGCATCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VLAFLRALCFWRRLL*FVSTSCRAFCNASW Trigger: CCAGGATGCATTACAGAAAGCTCTGCAAGACGTGGACACAAAGCATAAAAGTCTTCGCCAGAAACAGAGGGCCCTAAGGAAAGCAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 90 bp | TTCTGTAATGCATCCTGGGTAGAAGACAAAGCAATTCTGTCCGGCTaGTTTACTTTGGCTTGCACCTCTTTAAACAGGAGTTCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: FCNASWVEDKAILSG*FTLACTSLNRSSAL Trigger: GAGGGCTGAACTCCTGTTTAAAGAGGTGCAAGCCAAAGTAAACCAGCCGGACAGAATTGCTTTGTCTTCTACCCAGGATGCATTACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | CTTCATCAGGGCTCATGCCACATCCATCATCCAGGAAACACAACATaGATCCTCCCTGCAGTGTTTCATTATCCACTGAAAACACATCGA | + |
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Preference number: 5 (lower is better) Translates to: LHQGSCHIHHPGNTT*ILPAVFHYPLKTHR Trigger: TCGATGTGTTTTCAGTGGATAATGAAACACTGCAGGGAGGATTCATGTTGTGTTTCCTGGATGATGGATGTGGCATGAGCCCTGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | TCACTACTGGAGTATCATCACACAGCTCTTGTTTGTCTGGCTTTATaGGGGGAACTTCCTCCTCTTCTTCTTGTTTCAGTGAGACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLLEYHHTALVCLAL*GELPPLLLVSVRPW Trigger: CCAAGGTCTCACTGAAACAAGAAGAAGAGGAGGAAGTTCCCCTCATAAAGCCAGACAAACAAGAGCTGTGTGATGATACTCCAGTAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | CAGTCCTCTTCCTTTTCAGTTCACACTGTCCCAGAAACACTTGGTTaGGTAAGCCCCTTCTGTTTGCCTCATAGACAATGGACTGCATTT | + |
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Preference number: 5 (lower is better) Translates to: QSSSFSVHTVPETLG*VSPFCLPHRQWTAF Trigger: AAATGCAGTCCATTGTCTATGAGGCAAACAGAAGGGGCTTACTCAACCAAGTGTTTCTGGGACAGTGTGAACTGAAAAGGAAGAGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 90 bp | CTCATGCCACATCCATCATCCAGGAAACACAACATGAATCCTCCCTaGAGTGTTTCATTATCCACTGAAAACACATCGAGTCTTACAGCC | + |
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Preference number: 5 (lower is better) Translates to: LMPHPSSRKHNMNPP*SVSLSTENTSSLTA Trigger: GGCTGTAAGACTCGATGTGTTTTCAGTGGATAATGAAACACTGCAGGGAGGATTCATGTTGTGTTTCCTGGATGATGGATGTGGCATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 90 bp | TTATGCTTTGTGTCCACGTCTTGCAGAGCTTTCTGTAATGCATCCTaGGTAGAAGACAAAGCAATTCTGTCCGGCTGGTTTACTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LCFVSTSCRAFCNAS*VEDKAILSGWFTLA Trigger: AGCCAAAGTAAACCAGCCGGACAGAATTGCTTTGTCTTCTACCCAGGATGCATTACAGAAAGCTCTGCAAGACGTGGACACAAAGCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 90 bp | GGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTTGTTGGGATTACTaGCACAAATCCATAGGTCAGGTAATCCTTTTTCCTGGTAATTGG | + |
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Preference number: 5 (lower is better) Translates to: GALSGYSCFPGCWDY*HKSIGQVILFPGNW Trigger: CCAATTACCAGGAAAAAGGATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | CTCTGGTTCTCGTTAGCCATGAAGGTATTGGAACTACAACCTCAGTaGGACCTTCTTTTTCACAGAAAGTCTGAGAGAAGAACAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: LWFSLAMKVLELQPQ*DLLFHRKSERRTDR Trigger: CCTGTCTGTTCTTCTCTCAGACTTTCTGTGAAAAAGAAGGTCTCACTGAGGTTGTAGTTCCAATACCTTCATGGCTAACGAGAACCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 90 bp | CTCGGCCATCAGTATATCTTCTTTGTCGGTTGTAACATCCAACTCTaGTTCTCCGCTAAGCAGCAGCTTCAAGTTATAAATAATCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LGHQYIFFVGCNIQL*FSAKQQLQVINNQQ Trigger: TTGCTGATTATTTATAACTTGAAGCTGCTGCTTAGCGGAGAACCAGAGTTGGATGTTACAACCGACAAAGAAGATATACTGATGGCCGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 90 bp | GTTATGAGTTCTTCCACAGATGTGCACTCAAATTCTGATGATAGCTaGAACTCGGGAACAAAGTATAGAAGAATTTCCCTTAAGTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: VMSSSTDVHSNSDDS*NSGTKYRRISLKLD Trigger: GTCTAACTTAAGGGAAATTCTTCTATACTTTGTTCCCGAGTTTCAGCTATCATCAGAATTTGAGTGCACATCTGTGGAAGAACTCATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | CACAGTTGGATCTCTGCTGCTAGCCACGTCAGTGGATaGCTTGCCTGCCTGCACGAGGCTCTCACTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HSWISAASHVSG*LACLHEALTLL Trigger: CAGCAGAGTGAGAGCCTCGTGCAGGCAGGCAAGGCATCCACTGACGTGGCTAGCAGCAGAGATCCAACTGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GTTGGATCTCTGCTGCTAGCCACGTCAGTGGATGCCTaGCCTGCCTGCACGAGGCTCTCACTCTGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VGSLLLATSVDA*PACTRLSLCCF Trigger: AAAGCAGCAGAGTGAGAGCCTCGTGCAGGCAGGCAAGGCATCCACTGACGTGGCTAGCAGCAGAGATCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TTTCCCGTGAAGAAACCTGGGCTGTGTCCTCGAGTTTaGGGTTTTCCAATAGAGCTGGAGCGTGACCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FPVKKPGLCPRV*GFPIELERDQA Trigger: AGCCTGGTCACGCTCCAGCTCTATTGGAAAACCTCAAACTCGAGGACACAGCCCAGGTTTCTTCACGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | ACGGTGCCCAGTGGGATAGAAGGCAGGCGCTCTATCTaGTTACAGCTGTTTTCCAGGTTGTTGGGATTACTG | + |
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Preference number: 6 (lower is better) Translates to: TVPSGIEGRRSI*LQLFSRLLGLL Trigger: CAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCTGCCTTCTATCCCACTGGGCACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | AACACATCGAGTCTTACAGCCCCGGCATCTCTTGCGTaGTCCAGCAACTCAGCCAGTGCTCCAAAGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: NTSSLTAPASLA*SSNSASAPKRK Trigger: TTTCCTCTTTGGAGCACTGGCTGAGTTGCTGGACAACGCAAGAGATGCCGGGGCTGTAAGACTCGATGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | CTGAAAACACATCGAGTCTTACAGCCCCGGCATCTCTaGCGTTGTCCAGCAACTCAGCCAGTGCTCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LKTHRVLQPRHL*RCPATQPVLQR Trigger: TCTTTGGAGCACTGGCTGAGTTGCTGGACAACGCAAGAGATGCCGGGGCTGTAAGACTCGATGTGTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GTCAGGTCTGCCCCTGAAGGCTGGATTCTCCCAAGTTaGGATTTTTCCTTGAGTGCTGAGGAAAGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRSAPEGWILPS*DFSLSAEERQE Trigger: CTCCTGCCTTTCCTCAGCACTCAAGGAAAAATCCAAACTTGGGAGAATCCAGCCTTCAGGGGCAGACCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | TCCACTGAAAACACATCGAGTCTTACAGCCCCGGCATCTCTTGCGTaGTCCAGCAACTCAGCCAGTGCTCCAAAGAGGAAACTGTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: STENTSSLTAPASLA*SSNSASAPKRKLCV Trigger: AACACACAGTTTCCTCTTTGGAGCACTGGCTGAGTTGCTGGACAACGCAAGAGATGCCGGGGCTGTAAGACTCGATGTGTTTTCAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | CTCTCTGGAATTTCCTCCGGAGCCTCGGCCATCAGTATATCTTCTTaGTCGGTTGTAACATCCAACTCTGGTTCTCCGCTAAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSGISSGASAISISS*SVVTSNSGSPLSSS Trigger: GCTGCTGCTTAGCGGAGAACCAGAGTTGGATGTTACAACCGACAAAGAAGATATACTGATGGCCGAGGCTCCGGAGGAAATTCCAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TCCGGGGTTCAAAATACAGAACAGCTGTGTAGGCTCTaGATGACCGTCTCTCTGGAATTTCCTCCGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SGVQNTEQLCRL*MTVSLEFPPEP Trigger: AGGCTCCGGAGGAAATTCCAGAGAGACGGTCATTCAGAGCCTACACAGCTGTTCTGTATTTTGAACCCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TCCTCGAGTTTGAGGTTTTCCAATAGAGCTGGAGCGTaGCCAGGCTGCAGGTACTTCACGGTCTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: SSSLRFSNRAGA*PGCRYFTVFFT Trigger: TGTGAAGAAGACCGTGAAGTACCTGCAGCCTGGTCACGCTCCAGCTCTATTGGAAAACCTCAAACTCGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TCTGCAGCAGCAAGGCCAGCTTTGCACGAAGGTCACTaGGTTTCTCCTCAGTCCTCTTCCTTTTCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SAAARPALHEGH*VSPQSSSFSVH Trigger: GTGAACTGAAAAGGAAGAGGACTGAGGAGAAACTCAGTGACCTTCGTGCAAAGCTGGCCTTGCTGCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | CATTATCCACTGAAAACACATCGAGTCTTACAGCCCCGGCATCTCTaGCGTTGTCCAGCAACTCAGCCAGTGCTCCAAAGAGGAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: HYPLKTHRVLQPRHL*RCPATQPVLQRGNC Trigger: ACAGTTTCCTCTTTGGAGCACTGGCTGAGTTGCTGGACAACGCAAGAGATGCCGGGGCTGTAAGACTCGATGTGTTTTCAGTGGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | GTCTTTGCCGATTCTCATGGAGCCGCTCTTAAGCCCGTTACCATATaGCCCGATGAACTTCAAGGTCGACAAGCGTTTCTTGGATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VFADSHGAALKPVTI*PDELQGRQAFLGCS Trigger: GGAACATCCAAGAAACGCTTGTCGACCTTGAAGTTCATCGGGCAATATGGTAACGGGCTTAAGAGCGGCTCCATGAGAATCGGCAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | GGAATCTTCGTCATGCAGATGAACTCCACGTCCGAGTaGGTATCCTCTGTGCTCCTCTTTTGGCTTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GIFVMQMNSTSE*VSSVLLFWLLC Trigger: GCAAAGAAGCCAAAAGAGGAGCACAGAGGATACTCACTCGGACGTGGAGTTCATCTGCATGACGAAGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TGTTTCTTCCACAGACATGCTTTGAGAAGGCATTGGTaGAGCCGGCAGCTGACAGTCACCACTCACAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: CFFHRHALRRHW*SRQLTVTTHRV Trigger: AACTCTGTGAGTGGTGACTGTCAGCTGCCGGCTTCACCAATGCCTTCTCAAAGCATGTCTGTGGAAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | GCTCCAAAGAGGAAACTGTGTGTTGTGGAATTCGCGTaGATGAAATCCAGATGCAGTTTAGCCCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: APKRKLCVVEFA*MKSRCSLALCS Trigger: GCTGCAGAGGGCTAAACTGCATCTGGATTTCATCCACGCGAATTCCACAACACACAGTTTCCTCTTTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GGCAGGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTaGTTGGGATTACTGGCACAAATCCATAGGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GRRSIWLQLFSR*LGLLAQIHRSG Trigger: ACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | CTGTGTGTTGTGGAATTCGCGTGGATGAAATCCAGATaGAGTTTAGCCCTCTGCAGCAAGGCATATTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LCVVEFAWMKSR*SLALCSKAYLS Trigger: GGACAAATATGCCTTGCTGCAGAGGGCTAAACTGCATCTGGATTTCATCCACGCGAATTCCACAACACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | ATTCTCATGGAGCCGCTCTTAAGCCCGTTACCATATTaGCCGATGAACTTCAAGGTCGACAAGCGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ILMEPLLSPLPY*PMNFKVDKRFL Trigger: CAAGAAACGCTTGTCGACCTTGAAGTTCATCGGGCAATATGGTAACGGGCTTAAGAGCGGCTCCATGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | CCTCCTCTTCTTCTTGTTTCAGTGAGACCTTGGTGCTaGTTTGATCCCAAACCATGGTCACAGTTGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: PPLLLVSVRPWC*FDPKPWSQLDL Trigger: GAGATCCAACTGTGACCATGGTTTGGGATCAAAGCAGCACCAAGGTCTCACTGAAACAAGAAGAAGAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | GTGTCCACGTCTTGCAGAGCTTTCTGTAATGCATCCTaGGTAGAAGACAAAGCAATTCTGTCCGGCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: VSTSCRAFCNAS*VEDKAILSGWF Trigger: AAACCAGCCGGACAGAATTGCTTTGTCTTCTACCCAGGATGCATTACAGAAAGCTCTGCAAGACGTGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GATTCTCATGGAGCCGCTCTTAAGCCCGTTACCATATaGCCCGATGAACTTCAAGGTCGACAAGCGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: DSHGAALKPVTI*PDELQGRQAFL Trigger: AAGAAACGCTTGTCGACCTTGAAGTTCATCGGGCAATATGGTAACGGGCTTAAGAGCGGCTCCATGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | ATTTCCTCCGGAGCCTCGGCCATCAGTATATCTTCTTaGTCGGTTGTAACATCCAACTCTGGTTCTCCGCTA | + |
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Preference number: 6 (lower is better) Translates to: ISSGASAISISS*SVVTSNSGSPL Trigger: TAGCGGAGAACCAGAGTTGGATGTTACAACCGACAAAGAAGATATACTGATGGCCGAGGCTCCGGAGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | CTTCTGTGTTCACTCCAAAGAACAGAGAGAGAGTTCTaGCTTTCCTTAGGGCCCTCTGTTTCTGGCGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LLCSLQRTEREF*LSLGPSVSGED Trigger: GTCTTCGCCAGAAACAGAGGGCCCTAAGGAAAGCAAGAACTCTCTCTCTGTTCTTTGGAGTGAACACAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | GGGATAGAAGGCAGGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTaGTTGGGATTACTGGCACAAATCCATAGGTCAGGTAATCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GIEGRRSIWLQLFSR*LGLLAQIHRSGNPF Trigger: AAAAGGATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCTGCCTTCTATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TATGAGGGGAACTTCCTCCTCTTCTTCTTGTTTCAGTaGGACCTTGGTGCTGCTTTGATCCCAAACCATGGT | + |
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Preference number: 6 (lower is better) Translates to: YEGNFLLFFLFQ*DLGAALIPNHG Trigger: ACCATGGTTTGGGATCAAAGCAGCACCAAGGTCTCACTGAAACAAGAAGAAGAGGAGGAAGTTCCCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | CATTTGCACCCCGGGCAAGCTTTTCCAGTGAAGCGCTaGAGAATTTCCTTTCACTACTGGAGTATCATCACA | + |
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Preference number: 6 (lower is better) Translates to: HLHPGQAFPVKR*RISFHYWSIIT Trigger: TGTGATGATACTCCAGTAGTGAAAGGAAATTCTTCAGCGCTTCACTGGAAAAGCTTGCCCGGGGTGCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | GCATCCTGGGTAGAAGACAAAGCAATTCTGTCCGGCTaGTTTACTTTGGCTTGCACCTCTTTAAACAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: ASWVEDKAILSG*FTLACTSLNRS Trigger: ACTCCTGTTTAAAGAGGTGCAAGCCAAAGTAAACCAGCCGGACAGAATTGCTTTGTCTTCTACCCAGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | GGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTTGTTaGGATTACTGGCACAAATCCATAGGTCAGGTAATC | + |
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Preference number: 6 (lower is better) Translates to: GALSGYSCFPGC*DYWHKSIGQVI Trigger: GATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GTAGAAGACAAAGCAATTCTGTCCGGCTGGTTTACTTaGGCTTGCACCTCTTTAAACAGGAGTTCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VEDKAILSGWFT*ACTSLNRSSAL Trigger: GAGGGCTGAACTCCTGTTTAAAGAGGTGCAAGCCAAAGTAAACCAGCCGGACAGAATTGCTTTGTCTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | ATAGAAGGCAGGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTTGTaGGGATTACTGGCACAAATCCATAGGTCAGGTAATCCTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IEGRRSIWLQLFSRL*GLLAQIHRSGNPFS Trigger: GGAAAAAGGATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCTGCCTTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | GGCTCATGCCACATCCATCATCCAGGAAACACAACATaGATCCTCCCTGCAGTGTTTCATTATCCACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: GSCHIHHPGNTT*ILPAVFHYPLK Trigger: TTTCAGTGGATAATGAAACACTGCAGGGAGGATTCATGTTGTGTTTCCTGGATGATGGATGTGGCATGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | GACAAAGCAATTCTGTCCGGCTGGTTTACTTTGGCTTaGACCTCTTTAAACAGGAGTTCAGCCCTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: DKAILSGWFTLA*TSLNRSSALFT Trigger: AGTAAAGAGGGCTGAACTCCTGTTTAAAGAGGTGCAAGCCAAAGTAAACCAGCCGGACAGAATTGCTTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | CACTACTGGAGTATCATCACACAGCTCTTGTTTGTCTaGCTTTATGAGGGGAACTTCCTCCTCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HYWSIITQLLFV*LYEGNFLLFFL Trigger: CAAGAAGAAGAGGAGGAAGTTCCCCTCATAAAGCCAGACAAACAAGAGCTGTGTGATGATACTCCAGTAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | AGGCGCTCTATCTGGTTACAGCTGTTTTCCAGGTTGTaGGGATTACTGGCACAAATCCATAGGTCAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: RRSIWLQLFSRL*GLLAQIHRSGN Trigger: ATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGATAGAGCGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | GAGTATCATCACACAGCTCTTGTTTGTCTGGCTTTATaGGGGGAACTTCCTCCTCTTCTTCTTGTTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: EYHHTALVCLAL*GELPPLLLVSV Trigger: CACTGAAACAAGAAGAAGAGGAGGAAGTTCCCCTCATAAAGCCAGACAAACAAGAGCTGTGTGATGATACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | ATTTCCTTTCACTACTGGAGTATCATCACACAGCTCTaGTTTGTCTGGCTTTATGAGGGGAACTTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ISFHYWSIITQL*FVWLYEGNFLL Trigger: GAGGAGGAAGTTCCCCTCATAAAGCCAGACAAACAAGAGCTGTGTGATGATACTCCAGTAGTGAAAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS GCA 72 bp | CATCCATCATCCAGGAAACACAACATGAATCCTCCCTaGAGTGTTTCATTATCCACTGAAAACACATCGAGT | + |
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Preference number: 6 (lower is better) Translates to: HPSSRKHNMNPP*SVSLSTENTSS Trigger: ACTCGATGTGTTTTCAGTGGATAATGAAACACTGCAGGGAGGATTCATGTTGTGTTTCCTGGATGATGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | TCTGGTTACAGCTGTTTTCCAGGTTGTTGGGATTACTaGCACAAATCCATAGGTCAGGTAATCCTTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGYSCFPGCWDY*HKSIGQVILFP Trigger: AGGAAAAAGGATTACCTGACCTATGGATTTGTGCCAGTAATCCCAACAACCTGGAAAACAGCTGTAACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | GAAGAATTTCCTTTCACTACTGGAGTATCATCACACAGCTCTTGTTaGTCTGGCTTTATGAGGGGAACTTCCTCCTCTTCTTCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EEFPFTTGVSSHSSC*SGFMRGTSSSSSCF Trigger: GAAACAAGAAGAAGAGGAGGAAGTTCCCCTCATAAAGCCAGACAAACAAGAGCTGTGTGATGATACTCCAGTAGTGAAAGGAAATTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TCGTTAGCCATGAAGGTATTGGAACTACAACCTCAGTaGGACCTTCTTTTTCACAGAAAGTCTGAGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLAMKVLELQPQ*DLLFHRKSERR Trigger: TCTTCTCTCAGACTTTCTGTGAAAAAGAAGGTCTCACTGAGGTTGTAGTTCCAATACCTTCATGGCTAACGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 90 bp | TTTGATCAATCGGTTATTACTGTAAATGAACATTCCAGCTTGGTGTaGGTCTTCTGTGTTCACTCCAAAGAACAGAGAGAGAGTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FDQSVITVNEHSSLV*VFCVHSKEQRESSC Trigger: GCAAGAACTCTCTCTCTGTTCTTTGGAGTGAACACAGAAGACCAACACCAAGCTGGAATGTTCATTTACAGTAATAACCGATTGATCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CCA 72 bp | CAGTATATCTTCTTTGTCGGTTGTAACATCCAACTCTaGTTCTCCGCTAAGCAGCAGCTTCAAGTTATAAAT | + |
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Preference number: 6 (lower is better) Translates to: QYIFFVGCNIQL*FSAKQQLQVIN Trigger: ATTTATAACTTGAAGCTGCTGCTTAGCGGAGAACCAGAGTTGGATGTTACAACCGACAAAGAAGATATACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS CAA 72 bp | GATCAATCGGTTATTACTGTAAATGAACATTCCAGCTaGGTGTTGGTCTTCTGTGTTCACTCCAAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: DQSVITVNEHSS*VLVFCVHSKEQ Trigger: CTGTTCTTTGGAGTGAACACAGAAGACCAACACCAAGCTGGAATGTTCATTTACAGTAATAACCGATTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TCTTCCACAGATGTGCACTCAAATTCTGATGATAGCTaGAACTCGGGAACAAAGTATAGAAGAATTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSTDVHSNSDDS*NSGTKYRRISL Trigger: AAGGGAAATTCTTCTATACTTTGTTCCCGAGTTTCAGCTATCATCAGAATTTGAGTGCACATCTGTGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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| CDS TCA 72 bp | TGTTTGCCTCATAGACAATGGACTGCATTTTCCTCTTaGGTCTTTTCTCATACTGAGCCATGTAGATATTCT | + |
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Preference number: 6 (lower is better) Translates to: CLPHRQWTAFSS*VFSHTEPCRYS Trigger: AGAATATCTACATGGCTCAGTATGAGAAAAGACTCAAGAGGAAAATGCAGTCCATTGTCTATGAGGCAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023330.8 |
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