Pregenerated sensors for MOK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056458Ensembl transcript IDs: ENSMUST00000070565.15, ENSMUST00000084974.11
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTaGGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: GERQAARQHVLATTQ*EEHQHGAASGPSTL Trigger: GAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCTACGCCTGCCATGGTaGCAGCCCTTGCTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QGSMSWPPRSARSTSMGQLRLPW*QPLLSK Trigger: CTTGGAGAGCAAGGGCTGGCACCATGGCAGGCGTAG...CTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGCAGAGGCCTACGCCTaGCATGGTGCCAGCCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: CGERQAARQHVLATTQCEAEAYA*HGASPC Trigger: GCAAGGGCTGGCACCATGGCAGGCGTAGGCCTCTGC...CTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR GCA 90 bp | CAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTaGGAGGAGCACCAGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: QTRKAPACGERQAARQHVLATTQ*EEHQHG Trigger: CCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAG...GACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR CCA 90 bp | AACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCTACGCCTGCCATaGTGCCAGCCCTTGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: NTQGSSLWRETGCKAACPGLRLP*CQPLLS Trigger: GGAGAGCAAGGGCTGGCACCATGGCAGGCGTAGGCC...AGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGCATGGGGCAGCCTCTaGCCCATCCACTCTCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: LQTRKAPACGERQAARQHAWGSL*PIHSQP Trigger: CGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGC...ATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR CAA 90 bp | ATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTaGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: IQCSRSGAANTQGSS*WRETGCKAACPGHH Trigger: GTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR GCA 90 bp | AAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGCTGGCCACCACGCAGTaGGAGGAGCACCAGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: KHSVQPLWSCKHARLQLVLATTQ*EEHQHG Trigger: CCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAG...CACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR CCA 90 bp | AAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGGCCTACGCCTGCCATaGTGCCAGCCCTTGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KHSVQPLWSCKHARLQLVGLRLP*CQPLLS Trigger: GGAGAGCAAGGGCTGGCACCATGGCAGGCGTAGGCC...CACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR-3UTR CCA 90 bp | GAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTCAAGGCAGCATGTCCTaGCCACCACGCAGTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: ETFSAAALELQTRKAPACQGSMS*PPRSAR Trigger: CCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTG...ACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR CCA 72 bp | CACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTaGCCCATCCACTCTCAGCCGCAGAGGCCTACGCCT | + |
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Preference number: 3 (lower is better) Translates to: HAVRGAPAWGSL*PIHSQPQRPTP Trigger: AGGCGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR GCA 72 bp | TCCACTCTCAGCCGCAGAGGCCTACGCCTGCCATGGTaGCAGCCCTTGCTCTCCAAGAGGACGACTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: STLSRRGLRLPW*QPLLSKRTTGW Trigger: CCACCCAGTCGTCCTCTTGGAGAGCAAGGGCTGGCACCATGGCAGGCGTAGGCCTCTGCGGCTGAGAGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR CCA 72 bp | CGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTaGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RSGAANTQGSSL*RETGCKAACPG Trigger: GCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR GCA 72 bp | ATTAAACGGAAACATTCAGTGCAGCCGCTCTGGAGCTaGAAACACGCAAGGCTCCAGCTTGTGGAGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: IKRKHSVQPLWS*KHARLQLVERD Trigger: GTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCGTTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR CCA 72 bp | AAATATATTAAACGGAAACATTCAGTGCAGCCGCTCTaGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: KYIKRKHSVQPL*SCKHARLQLVE Trigger: CTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCGTTTAATATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR GCA 72 bp | GGTGGTTTTACAAATATATTAAACGGAAACATTCAGTaGAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GGFTNILNGNIQ*SRSGAANTQGS Trigger: GGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCGTTTAATATATTTGTAAAACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | GCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTTCCAGTGCCCAGCACTaGCCGCAGTGCAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ATTQCEEHQHGAASGPSTSSAQH*PQCRAG Trigger: TCCAGCCCTGCACTGCGGTCAGTGCTGGGCACTGGA...AGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | CACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCTACGCGGTGAGGAGACACTCTaGGGCCCGGTACCACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: HQHGAASGPSTLSRRGLRGEETL*GPVPPG Trigger: ACCCGGTGGTACCGGGCCCCAGAGTGTCTCCTCACC...GCGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | CAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGGGTGAGGAGACACTCTaGGGCCCGGTACCACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: QGSMSWPPRSARSTSMGQGEETL*GPVPPG Trigger: ACCCGGTGGTACCGGGCCCCAGAGTGTCTCCTCACC...CTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | CCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGTCCAGTGCCCAGCACTaGCCGCAGTGCAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PLWSCKHARLQLVERDRLSSAQH*PQCRAG Trigger: TCCAGCCCTGCACTGCGGTCAGTGCTGGGCACTGGA...CAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | GCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTAGGAGGGAGAGGCATTaGGGGGACAAATTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ATTQCEEHQHGAASGPSTRRERH*GDKLAV Trigger: GACAGCCAATTTGTCCCCGCAATGCCTCTCCCTCCT...AGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR GCA 90 bp | GTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCACGCAGGGACTGTTTCTaGTTTCTGCCTTCCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VLATTQCEEHQHGAASGPRRDCF*FLPSCE Trigger: CTCACAGGAAGGCAGAAAGCAGAAACAGTCCCTGCG...TGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGGCAGTGCAAGGATGTTaGGGTGTGGGTTCAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GERQAARQHVLATTQCEEAVQGC*GVGSGA Trigger: GGCGCCTGAACCCACACCCCAACATCCTTGCACTGC...CTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | CACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCCGACAGCCTCAGTTTaGGAAGCTCCATCAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HHAVRGAPAWGSLWPIHSPTASV*EAPSSW Trigger: CCAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGG...AGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | GCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCTACGTTAGTGAGGGTCTTCTaGCAAGGTGTGCCGATGACA | + |
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Preference number: 4 (lower is better) Translates to: APAWGSLWPIHSQPQRPTLVRVF*QGVPMT Trigger: TGTCATCGGCACACCTTGTCAGAAGACCCTCACTAA...CGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | ACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCCTGTGTAGGGCTGCTTaGAATAGACACTCCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: TTQCEEHQHGAASGPSTLLCRAA*NRHSGM Trigger: CATGCCGGAGTGTCTATTCCAAGCAGCCCTACACAG...GAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | GAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EEHQHGAASGPSTLSRRGKLFCV*PGSVSQ Trigger: CTGAGACACAGACCCTGGCCAAACACAGAAGAGCTT...GCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | ACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCCCAGTTGTGACTGGATaGTTCTGGCACCATGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TTQCEEHQHGAASGPSTLPVVTG*FWHHGE Trigger: TTCTCCATGGTGCCAGAATCATCCAGTCACAACTGG...GAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCGCAGGGACTGTTTCTaGTTTCTGCCTTCCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GERQAARQHVLATTQCEERRDCF*FLPSCE Trigger: CTCACAGGAAGGCAGAAAGCAGAAACAGTCCCTGCG...CTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | GAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCACCGTTTCTGTGCATGTaGTCCAGCGATTTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: ETGCKAACPGHHAVRGAPPFLCM*SSDLHS Trigger: GCTGTGCAAATCGCTGGACCACATGCACAGAAACGG...TGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | ACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TTQCEEHQHGAASGPSTLKLFCV*PGSVSQ Trigger: CTGAGACACAGACCCTGGCCAAACACAGAAGAGCTT...GAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | GTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCAATGATTCTGGCACCATaGAGAACTTGGGACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VLATTQCEEHQHGAASGPMILAP*RTWDRK Trigger: CTTTCTGTCCCAAGTTCTCCATGGTGCCAGAATCAT...TGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | GAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCATGACCAGTTGTGACTaGATGATTCTGGCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: EEHQHGAASGPSTLSRRGMTSCD*MILAPW Trigger: CCATGGTGCCAGAATCATCCAGTCACAACTGGTCAT...GCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| 3UTR CAA 72 bp | AGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTaGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRSGAANTQGSS*WRETGCKAACP Trigger: AGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | CACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCTACGCGACAAGGTGTGCCGATaGCATCATGGATTTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: HQHGAASGPSTLSRRGLRDKVCR*HHGFLR Trigger: TCTCAAAAATCCATGATGTCATCGGCACACCTTGTC...GCGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR TCA 90 bp | ACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCAGTTTCAGGTGAGGTTTaGTGTCCTTCTGCGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGCKAACPGHHAVRGAPAVSGEV*CPSACL Trigger: CAGACACGCAGAAGGACATCAAACCTCACCTGAAAC...TGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | GCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGTTCAGGCGCCTCAGTaGTTGGATCTCTCGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: AAALELQTRKAPACGERQVQAPQ*LDLSQT Trigger: AGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAAC...CTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | CCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGAGGCGCCTCAGTGCTTaGATCTCTCGCAGACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PLWSCKHARLQLVERDRLRRLSA*ISRRLF Trigger: GAACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCT...CAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | GCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCTACGATTGCGGGGACAAATTaGCTGTCAGTAGAGGTATTC | + |
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Preference number: 4 (lower is better) Translates to: APAWGSLWPIHSQPQRPTIAGTN*LSVEVF Trigger: GAATACCTCTACTGACAGCCAATTTGTCCCCGCAAT...CGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | GCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTATGATTCTGGCACCATaGAGAACTTGGGACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ATTQCEEHQHGAASGPSTMILAP*RTWDRK Trigger: CTTTCTGTCCCAAGTTCTCCATGGTGCCAGAATCAT...AGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | CAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGATGACCAGTTGTGACTaGATGATTCTGGCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: QGSMSWPPRSARSTSMGQMTSCD*MILAPW Trigger: CCATGGTGCCAGAATCATCCAGTCACAACTGGTCAT...CTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | AGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCAGTTTCAGGTGAGGTTTaGTGTCCTTCTGCGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RETGCKAACPGHHAVRGAVSGEV*CPSACL Trigger: CAGACACGCAGAAGGACATCAAACCTCACCTGAAAC...TGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | TGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGAAGGATGTTGGGGTGTaGGTTCAGGCGCCTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CKHARLQLVERDRLQGSMKDVGV*VQAPQC Trigger: GCACTGAGGCGCCTGAACCCACACCCCAACATCCTT...CATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | CAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCAGAGGGGCTGCAGGCTaGCAATCTCGTAGAACACGC | + |
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Preference number: 4 (lower is better) Translates to: QTRKAPACGERQAARQHVRGAAG*QSRRTR Trigger: GCGTGTTCTACGAGATTGCCAGCCTGCAGCCCCTCT...GACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | GTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATGGATTTTTGAGATCTaGTCCAGTTCATTCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VLATTQCEEHQHGAASGPWIFEI*SSSFTP Trigger: TGGTGTGAATGAACTGGACCAGATCTCAAAAATCCA...TGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR GCA 90 bp | GCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCTACGAGTTTCAGGACATCCTaGTTTACTAGGATATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APAWGSLWPIHSQPQRPTSFRTS*FTRIFS Trigger: GGAGAATATCCTAGTAAAGCAGGATGTCCTGAAACT...CGTAGGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | CAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCGTCATAAGCCACCATTaGGTGCAGGAGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTRKAPACGERQAARQHVVISHH*VQEGEA Trigger: TGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGAC...GACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGACTGTTTCTGCTTTCTaGCTTCCTGTGAGAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: GERQAARQHVLATTQCEETVSAF*LPVRMT Trigger: GGTCATTCTCACAGGAAGGCAGAAAGCAGAAACAGT...CTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CCA 90 bp | AGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAACATGATGACAGTTTaGTCATTCCCGACAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRLQGSMSWPPRSARSTNMMTV*SFPTAS Trigger: TGAGGCTGTCGGGAATGACCAAACTGTCATCATGTT...GGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | CACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTGACATCATGGATTTTTaGGATCTGGTCCAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HHAVRGAPAWGSLWPIHSDIMDF*DLVQFI Trigger: AATGAACTGGACCAGATCTCAAAAATCCATGATGTC...AGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR GCA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGTCCCCTCTCCTATCTTaGCAATTGCTTTGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GERQAARQHVLATTQCEESPLLS*QLLCSS Trigger: AGAACTACAAAGCAATTGGCAAGATAGGAGAGGGGA...CTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR GCA 90 bp | GCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAAGTTTCAGGACATCCTaGTTTACTAGGATATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARQHVLATTQCEEHQHGASFRTS*FTRIFS Trigger: GGAGAATATCCTAGTAAAGCAGGATGTCCTGAAACT...TGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCAACTGTTTCTGCTTTCTaGCTTCCTGTGAGAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RETGCKAACPGHHAVRGATVSAF*LPVRMT Trigger: GGTCATTCTCACAGGAAGGCAGAAAGCAGAAACAGT...TGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | CTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGAGAATGACCAGTTGTaGCTGGATGATTCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQTRKAPACGERQAARQHENDQL*LDDSGT Trigger: GGTGCCAGAATCATCCAGTCACAACTGGTCATTCTC...ATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | GCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAATACTTTCAAAGTGCTaGTTCATTTGTTTGCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARQHVLATTQCEEHQHGAILSKC*FICLHA Trigger: TGCGTGCAAACAAATGAAGCAGCACTTTGAAAGTAT...TGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS-3UTR CCA 90 bp | GCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGAACATGATGACAGTTTaGTCATTCCCGACAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAALELQTRKAPACGERQNMMTV*SFPTAS Trigger: TGAGGCTGTCGGGAATGACCAAACTGTCATCATGTT...CTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
||
| CDS-3UTR TCA 90 bp | GAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGAGAATGACCAGTTGTaGCTGGATGATTCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ETFSAAALELQTRKAPACENDQL*LDDSGT Trigger: GGTGCCAGAATCATCCAGTCACAACTGGTCATTCTC...ACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR GCA 90 bp | GCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCTTCATTTGTTTaGACGCATAGTAATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAALELQTRKAPACGERQAASFV*THSNSH Trigger: ATGGGAATTACTATGCGTGCAAACAAATGAAGCAGC...CTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CCA 90 bp | AAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCGTGCCGATGACATCATaGATTTTTGAGATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHARLQLVERDRLQGSMSVPMTS*IFEIWS Trigger: GGACCAGATCTCAAAAATCCATGATGTCATCGGCAC...GGACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR GCA 90 bp | GAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTCGCAGACTGTTCACTTaGTCAATACTTTCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETFSAAALELQTRKAPACRRLFT*SILSKC Trigger: GCACTTTGAAAGTATTGAGCAAGTGAACAGTCTGCG...ACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS-3UTR CCA 90 bp | AATATATTAAACGGAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAACCGACAGCCTCAGTTTaGGAAGCTCCATCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NILNGNIQCSRSGAANTQPTASV*EAPSSW Trigger: CCAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGG...TTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCGTTTAATATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR TCA 90 bp | AATATATTAAACGGAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAACCAGTTGTGACTGGATaGTTCTGGCACCATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NILNGNIQCSRSGAANTQPVVTG*FWHHGE Trigger: TTCTCCATGGTGCCAGAATCATCCAGTCACAACTGG...TTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCGTTTAATATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | GTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCTGGCCCACAGGAGGGAGAGGCATaGCGGGGACAAATTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLATTQCEEHQHGAASGPQEGEA*RGQIGC Trigger: ACAGCCAATTTGTCCCCGCAATGCCTCTCCCTCCTG...TGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CAA 90 bp | AGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCCGGTCATAAGCCACCATaGCGTGCAGGAGGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSTSMGQPLAHPLSAAEAGHKPP*RAGGRG Trigger: GCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACC...GGCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CAA 90 bp | AGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCCAGGCGCCTCAGTGCTaGGATCTCTCGCAGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RDRLQGSMSWPPRSARSTQAPQC*DLSQTV Trigger: AACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCTG...GGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CAA 90 bp | AGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCATGCAGTGCAAGGATGTaGGGGTGTGGGTTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RETGCKAACPGHHAVRGACSARM*GCGFRR Trigger: GCGCCTGAACCCACACCCCAACATCCTTGCACTGCA...TGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 90 bp | AGTTTGGGAAGCTCCATCAAGCTGGTCGGCCCCTGTCGTCTGGCATaGCCCTCCTCGTGCCGCAGGGACTGTTTCTGCTTTCTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGSSIKLVGPCRLA*PSSCRRDCFCFLPS Trigger: GGAAGGCAGAAAGCAGAAACAGTCCCTGCGGCACGAGGAGGGCCATGCCAGACGACAGGGGCCGACCAGCTTGATGGAGCTTCCCAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | AGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCAAAGCTCTTCTGTGTTaGGCCAGGGTCTGTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQHVLATTQCEEHQHGAAKALLC*ARVCVS Trigger: TGAGACACAGACCCTGGCCAAACACAGAAGAGCTTT...GGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCAGGGACTTTTCCATTaGCTCCAGTGCCCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GERQAARQHVLATTQCEEQGLFH*LQCPAL Trigger: CAGTGCTGGGCACTGGAGCAAATGGAAAAGTCCCTG...CTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | GCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGCCCGACAGCCTCAGTTaGGGAAGCTCCATCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAALELQTRKAPACGERQPDSLS*GSSIKL Trigger: CAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGGG...CTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS GCA 90 bp | GGCTTGGTGAGCCGCAATTCGTTCGTCAGGGTCATAAGCCACCATTaGGTGCAGGAGGGAGAGGCATTGCGGGGACAAATTGGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLVSRNSFVRVISHH*VQEGEALRGQIGCQ Trigger: CTGACAGCCAATTTGTCCCCGCAATGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCTCACCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 90 bp | CAGGTCCATCTTGTATGTGTAGAACCCGTCGGTGAGGAGACACTCTaGGGCCCGGTACCACCGGGTAGAGATGTACTCTGTGTAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVHLVCVEPVGEETL*GPVPPGRDVLCVGL Trigger: CAGCCCTACACAGAGTACATCTCTACCCGGTGGTACCGGGCCCCAGAGTGTCTCCTCACCGACGGGTTCTACACATACAAGATGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | AGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACCAGCATGGGGCAGCCTCGCAGACTGTTCACTaGCTCAATACTTTCAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQHVLATTQCEEHQHGAASQTVH*LNTFKV Trigger: CACTTTGAAAGTATTGAGCAAGTGAACAGTCTGCGA...GGCTGCCCCATGCTGGTGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS-3UTR CAA 90 bp | TGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGAAAGCTCTTCTGTGTTaGGCCAGGGTCTGTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CGERQAARQHVLATTQCEKALLC*ARVCVS Trigger: TGAGACACAGACCCTGGCCAAACACAGAAGAGCTTT...CTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CCA 90 bp | TGCCCAGCACTGACCGCAGTGCAGGGCTGGAACATGATGACAGTTTaGTCATTCCCGACAGCCTCAGTTTGGGAAGCTCCATCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPALTAVQGWNMMTV*SFPTASVWEAPSSW Trigger: CCAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | AGAGAGACAGGCTGCAAGGCAGCATGTCCTGGCCACCACGCAGTGCGAGGAGCACATTGCGGGGACAAATaGGCTGTCAGTAGAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RETGCKAACPGHHAVRGAHCGDK*AVSRGI Trigger: AATACCTCTACTGACAGCCAATTTGTCCCCGCAATG...TGCTCCTCGCACTGCGTGGTGGCCAGGACATGCTGCCTTGCAGCCTGTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS-3UTR CAA 90 bp | CAAACACGCAAGGCTCCAGCTTGTGGAGAGAGACAGGCTGCAAGGCAGCATGTCCAGGGACTTTTCCATTaGCTCCAGTGCCCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QTRKAPACGERQAARQHVQGLFH*LQCPAL Trigger: CAGTGCTGGGCACTGGAGCAAATGGAAAAGTCCCTG...GACATGCTGCCTTGCAGCCTGTCTCTCTCCACAAGCTGGAGCCTTGCGTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS GCA 90 bp | GTCTGGCATGGCCCTCCTCGTGCCGCAGGGACTGTTTCTGCTTTCTaGCTTCCTGTGAGAATGACCAGTTGTGACTGGATGATTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VWHGPPRAAGTVSAF*LPVRMTSCDWMILA Trigger: TGCCAGAATCATCCAGTCACAACTGGTCATTCTCACAGGAAGGCAGAAAGCAGAAACAGTCCCTGCGGCACGAGGAGGGCCATGCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS GCA 90 bp | CACACTTCAGGGGTCTCAGCACAGGGACTTTTCCATTTGCTCCAGTaGCCAGCACTGACCGCAGTGCAGGGCTGGAACATGATGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HTSGVSAQGLFHLLQ*PALTAVQGWNMMTV Trigger: AACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCACTGGAGCAAATGGAAAAGTCCCTGTGCTGAGACCCCTGAAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS-3UTR CAA 90 bp | GAGGAGCACCAGCATGGGGCAGCCTCTGGCCCATCCACTCTCAGCCGCAGAGGCAAAGTGCTGCTTCATTaGTTTGCACGCATAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: EEHQHGAASGPSTLSRRGKVLLH*FARIVI Trigger: AATTACTATGCGTGCAAACAAATGAAGCAGCACTTT...GCCTCTGCGGCTGAGAGTGGATGGGCCAGAGGCTGCCCCATGCTGGTGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 90 bp | CTTTTCCATTTGCTCCAGTGCCCAGCACTGACCGCAGTGCAGGGCTaGAACATGATGACAGTTTGGTCATTCCCGACAGCCTCAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFHLLQCPALTAVQG*NMMTVWSFPTASVW Trigger: CCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCACTGGAGCAAATGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CCA 90 bp | ATTCTGGCACCATGGAGAACTTGGGACAGAAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAGCTGCCCTCTGCACCTGGAAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILAPWRTWDRKLFCV*PGSVSQLPSAPGNR Trigger: CCTATTTCCAGGTGCAGAGGGCAGCTGAGACACAGACCCTGGCCAAACACAGAAGAGCTTTCTGTCCCAAGTTCTCCATGGTGCCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS-3UTR CAA 90 bp | AAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTGTGCGTGTCTGTCTTCTaGTTCACAGCAGCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHSVQPLWSCKHARLQLVCVSVF*FTAAHF Trigger: GAAGTGTGCTGCTGTGAACAAGAAGACAGACACGCA...CACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
||
| CDS-3UTR CAA 90 bp | GAAACATTCAGTGCAGCCGCTCTGGAGCTGCAAACACGCAAGGCTCCAGCTTGTTGCGTGTCTGTCTTCTaGTTCACAGCAGCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFSAAALELQTRKAPACCVSVF*FTAAHF Trigger: GAAGTGTGCTGCTGTGAACAAGAAGACAGACACGCA...ACAAGCTGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
||
| CDS CCA 90 bp | TGCAGTGCAAGGATGTTGGGGTGTGGGTTCAGGCGCCTCAGTGCTTaGATCTCTCGCAGACTGTTCACTTGCTCAATACTTTCAAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSARMLGCGFRRLSA*ISRRLFTCSILSKC Trigger: GCACTTTGAAAGTATTGAGCAAGTGAACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS CCA 90 bp | ATTCTGGCACCATGGAGAACTTGGGACAGAAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAGCTGCCCTGGCAATCTCGTAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: ILAPWRTWDRKLFCV*PGSVSQLPWQSRRT Trigger: TGTTCTACGAGATTGCCAGGGCAGCTGAGACACAGACCCTGGCCAAACACAGAAGAGCTTTCTGTCCCAAGTTCTCCATGGTGCCAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084974.11 |
||
| CDS GCA 90 bp | TTCGTGCAGTGCAAGGATGTTGGGGTGTGGGTTCAGGCGCCTCAGTaGTTGGATCTCTCGCAGACTGTTCACTTGCTCAATACTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FVQCKDVGVWVQAPQ*LDLSQTVHLLNTFK Trigger: TTTGAAAGTATTGAGCAAGTGAACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCACGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS CCA 90 bp | AACCAGATTTTCTGTCAAAAACTACTTCGTGCAGTGCAAGGATGTTaGGGTGTGGGTTCAGGCGCCTCAGTGCTTGGATCTCTCGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NQIFCQKLLRAVQGC*GVGSGASVLGSLAD Trigger: GTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCACGAAGTAGTTTTTGACAGAAAATCTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
||
| CDS TCA 90 bp | AGTGAGGGTCTTCTGACAAGGTGTGCCGATGACATCATGGATTTTTaGGATCTGGTCCAGTTCATTCACACCAGGAAAGAGGGGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SEGLLTRCADDIMDF*DLVQFIHTRKEGLQ Trigger: CTGCAGCCCCTCTTTCCTGGTGTGAATGAACTGGACCAGATCTCAAAAATCCATGATGTCATCGGCACACCTTGTCAGAAGACCCTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS TCA 90 bp | TCAAAACTCATAGCTCTCGACTGTTTGAACTTAGTGAGGGTCTTCTaGCAAGGTGTGCCGATGACATCATGGATTTTTGAGATCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SKLIALDCLNLVRVF*QGVPMTSWIFEIWS Trigger: GGACCAGATCTCAAAAATCCATGATGTCATCGGCACACCTTGTCAGAAGACCCTCACTAAGTTCAAACAGTCGAGAGCTATGAGTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS GCA 72 bp | CTGGTCGGCCCCTGTCGTCTGGCATGGCCCTCCTCGTaGCGCAGGGACTGTTTCTGCTTTCTGCCTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVGPCRLAWPSS*RRDCFCFLPSC Trigger: ACAGGAAGGCAGAAAGCAGAAACAGTCCCTGCGGCACGAGGAGGGCCATGCCAGACGACAGGGGCCGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CAA 90 bp | GGGCTTGGTGAGCCGCAATTCGTTCGTCAGGGTCATAAGCCACCATaGCGTGCAGGAGGGAGAGGCATTGCGGGGACAAATTGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLGEPQFVRQGHKPP*RAGGRGIAGTNWLS Trigger: TGACAGCCAATTTGTCCCCGCAATGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCTCACCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 72 bp | TTGCTCCAGTGCCCAGCACTGACCGCAGTGCAGGGCTaGAACATGATGACAGTTTGGTCATTCCCGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLQCPALTAVQG*NMMTVWSFPTA Trigger: GGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCACTGGAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CAA 90 bp | TGTCTCAGCTGCCCTCTGCACCTGGAAATAGGGGTGCTGAAGGGCTaGGTGAGCCGCAATTCGTTCGTCAGGGTCATAAGCCACCATTGC | + |
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Preference number: 6 (lower is better) Translates to: CLSCPLHLEIGVLKG*VSRNSFVRVISHHC Trigger: GCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCTCACCAAGCCCTTCAGCACCCCTATTTCCAGGTGCAGAGGGCAGCTGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CAA 90 bp | GTGCCCAGCACTGACCGCAGTGCAGGGCTGGAACATGATGACAGTTaGGTCATTCCCGACAGCCTCAGTTTGGGAAGCTCCATCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPSTDRSAGLEHDDS*VIPDSLSLGSSIKL Trigger: CAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGTGCTGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CCA 72 bp | CTTGTATGTGTAGAACCCGTCGGTGAGGAGACACTCTaGGGCCCGGTACCACCGGGTAGAGATGTACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVCVEPVGEETL*GPVPPGRDVLC Trigger: ACAGAGTACATCTCTACCCGGTGGTACCGGGCCCCAGAGTGTCTCCTCACCGACGGGTTCTACACATACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CAA 72 bp | GAGCCGCAATTCGTTCGTCAGGGTCATAAGCCACCATaGCGTGCAGGAGGGAGAGGCATTGCGGGGACAAAT | + |
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Preference number: 6 (lower is better) Translates to: EPQFVRQGHKPP*RAGGRGIAGTN Trigger: ATTTGTCCCCGCAATGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CAA 72 bp | TGCCCTCTGCACCTGGAAATAGGGGTGCTGAAGGGCTaGGTGAGCCGCAATTCGTTCGTCAGGGTCATAAGC | + |
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Preference number: 6 (lower is better) Translates to: CPLHLEIGVLKG*VSRNSFVRVIS Trigger: GCTTATGACCCTGACGAACGAATTGCGGCTCACCAAGCCCTTCAGCACCCCTATTTCCAGGTGCAGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS GCA 72 bp | AGCCGCAATTCGTTCGTCAGGGTCATAAGCCACCATTaGGTGCAGGAGGGAGAGGCATTGCGGGGACAAATT | + |
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Preference number: 6 (lower is better) Translates to: SRNSFVRVISHH*VQEGEALRGQI Trigger: AATTTGTCCCCGCAATGCCTCTCCCTCCTGCACGCAATGGTGGCTTATGACCCTGACGAACGAATTGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 72 bp | CCATGGAGAACTTGGGACAGAAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAGCTGCCCTCTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: PWRTWDRKLFCV*PGSVSQLPSAP Trigger: AGGTGCAGAGGGCAGCTGAGACACAGACCCTGGCCAAACACAGAAGAGCTTTCTGTCCCAAGTTCTCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 72 bp | ATGATGACAGTTTGGTCATTCCCGACAGCCTCAGTTTaGGAAGCTCCATCAAGCTGGTCGGCCCCTGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: MMTVWSFPTASV*EAPSSWSAPVV Trigger: GACGACAGGGGCCGACCAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CCA 72 bp | CTGACCGCAGTGCAGGGCTGGAACATGATGACAGTTTaGTCATTCCCGACAGCCTCAGTTTGGGAAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LTAVQGWNMMTV*SFPTASVWEAP Trigger: TGGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CAA 72 bp | CATGATGACAGTTTGGTCATTCCCGACAGCCTCAGTTaGGGAAGCTCCATCAAGCTGGTCGGCCCCTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: HDDSLVIPDSLS*GSSIKLVGPCR Trigger: ACGACAGGGGCCGACCAGCTTGATGGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CAA 72 bp | ACTGACCGCAGTGCAGGGCTGGAACATGATGACAGTTaGGTCATTCCCGACAGCCTCAGTTTGGGAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TDRSAGLEHDDS*VIPDSLSLGSS Trigger: GGAGCTTCCCAAACTGAGGCTGTCGGGAATGACCAAACTGTCATCATGTTCCAGCCCTGCACTGCGGTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS GCA 72 bp | TGCAAGGATGTTGGGGTGTGGGTTCAGGCGCCTCAGTaGTTGGATCTCTCGCAGACTGTTCACTTGCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CKDVGVWVQAPQ*LDLSQTVHLLN Trigger: ATTGAGCAAGTGAACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 72 bp | CCATGGAGAACTTGGGACAGAAAGCTCTTCTGTGTTTaGCCAGGGTCTGTGTCTCAGCTGCCCTGGCAATCT | + |
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Preference number: 6 (lower is better) Translates to: PWRTWDRKLFCV*PGSVSQLPWQS Trigger: AGATTGCCAGGGCAGCTGAGACACAGACCCTGGCCAAACACAGAAGAGCTTTCTGTCCCAAGTTCTCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084974.11 |
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| CDS GCA 72 bp | CGGCATGACCCGAAGTCCCCTAGTTTCAGGACATCCTaGTTTACTAGGATATTCTCCGGCTTCACGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RHDPKSPSFRTS*FTRIFSGFTSL Trigger: CAGAGACGTGAAGCCGGAGAATATCCTAGTAAAGCAGGATGTCCTGAAACTAGGGGACTTCGGGTCATGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070565.15 ENSMUST00000084974.11 |
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| CDS CCA 72 bp | AGGATGTTGGGGTGTGGGTTCAGGCGCCTCAGTGCTTaGATCTCTCGCAGACTGTTCACTTGCTCAATACTT | + |
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Preference number: 6 (lower is better) Translates to: RMLGCGFRRLSA*ISRRLFTCSIL Trigger: AAGTATTGAGCAAGTGAACAGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CCA 72 bp | TTCTGTCAAAAACTACTTCGTGCAGTGCAAGGATGTTaGGGTGTGGGTTCAGGCGCCTCAGTGCTTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: FCQKLLRAVQGC*GVGSGASVLGS Trigger: AGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCACGAAGTAGTTTTTGACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CAA 72 bp | TTTCTGTCAAAAACTACTTCGTGCAGTGCAAGGATGTaGGGGTGTGGGTTCAGGCGCCTCAGTGCTTGGATC | + |
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Preference number: 6 (lower is better) Translates to: FLSKTTSCSARM*GCGFRRLSAWI Trigger: GATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACATCCTTGCACTGCACGAAGTAGTTTTTGACAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS CAA 72 bp | ATTGCGTGCAGGAGGGAGAGGCATTGCGGGGACAAATaGGCTGTCAGTAGAGGTATTCCTGATCCCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: IACRRERHCGDK*AVSRGIPDPFL Trigger: TAAAAAGGGATCAGGAATACCTCTACTGACAGCCAATTTGTCCCCGCAATGCCTCTCCCTCCTGCACGCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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| CDS TCA 72 bp | CTTCTGACAAGGTGTGCCGATGACATCATGGATTTTTaGGATCTGGTCCAGTTCATTCACACCAGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLTRCADDIMDF*DLVQFIHTRKE Trigger: CTCTTTCCTGGTGTGAATGAACTGGACCAGATCTCAAAAATCCATGATGTCATCGGCACACCTTGTCAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070565.15 |
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