Pregenerated sensors for MOGAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012187Ensembl transcript IDs: ENSMUST00000012331.7, ENSMUST00000113524.8, ENSMUST00000134947.8, ENSMUST00000149732.8, ENSMUST00000152111.2
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAAACCCTTTGCGCTGGCGGATGCACAGGGTGAATGTTCCTGGGTaGGCCTCCAGCGCCTCCTTTGCACCTCCGAGGACAATGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: TNPLRWRMHRVNVPG*ASSASFAPPRTMIE Trigger: CTCAATCATTGTCCTCGGAGGTGCAAAGGAGGCGCTGGAGGCTCACCCAGGAACATTCACCCTGTGCATCCGCCAGCGCAAAGGGTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS CCA 90 bp | CTTAACAAACCCTTTGCGCTGGCGGATGCACAGGGTGAATGTTCCTaGGTGAGCCTCCAGCGCCTCCTTTGCACCTCCGAGGACAATGAT | + |
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Preference number: 5 (lower is better) Translates to: LNKPFALADAQGECS*VSLQRLLCTSEDND Trigger: ATCATTGTCCTCGGAGGTGCAAAGGAGGCGCTGGAGGCTCACCCAGGAACATTCACCCTGTGCATCCGCCAGCGCAAAGGGTTTGTTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS CCA 90 bp | CACAGGCCAGCTTTGGACCCAGTTCCATCTTCTGCCTCCTTGCTCTaGGGTTCTCCAGTCATAGTAAAACCAGACCAGATATGGGATGTA | + |
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Preference number: 5 (lower is better) Translates to: HRPALDPVPSSASLL*GSPVIVKPDQIWDV Trigger: TACATCCCATATCTGGTCTGGTTTTACTATGACTGGAGAACCCCAGAGCAAGGAGGCAGAAGATGGAACTGGGTCCAAAGCTGGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 ENSMUST00000152111.2 |
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| CDS TCA 90 bp | ACCTCCATCCTTGCTCAGCACATGAGACAAACTCTCCTTAGACACTaGAACCGGCCCGTTACTCATCAGATATTCTCGGAACAACGGGAA | + |
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Preference number: 5 (lower is better) Translates to: TSILAQHMRQTLLRH*NRPVTHQIFSEQRE Trigger: TTCCCGTTGTTCCGAGAATATCTGATGAGTAACGGGCCGGTTTCAGTGTCTAAGGAGAGTTTGTCTCATGTGCTGAGCAAGGATGGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS TCA 90 bp | AGGACAATGATTGAGACATTGCCACCTCCATCCTTGCTCAGCACATaGGACAAACTCTCCTTAGACACTGAAACCGGCCCGTTACTCATC | + |
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Preference number: 5 (lower is better) Translates to: RTMIETLPPPSLLST*DKLSLDTETGPLLI Trigger: GATGAGTAACGGGCCGGTTTCAGTGTCTAAGGAGAGTTTGTCTCATGTGCTGAGCAAGGATGGAGGTGGCAATGTCTCAATCATTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CCA 72 bp | CCCTTTGCGCTGGCGGATGCACAGGGTGAATGTTCCTaGGTGAGCCTCCAGCGCCTCCTTTGCACCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PFALADAQGECS*VSLQRLLCTSE Trigger: CTCGGAGGTGCAAAGGAGGCGCTGGAGGCTCACCCAGGAACATTCACCCTGTGCATCCGCCAGCGCAAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS TCA 72 bp | TTGCGCTGGCGGATGCACAGGGTGAATGTTCCTGGGTaGGCCTCCAGCGCCTCCTTTGCACCTCCGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: LRWRMHRVNVPG*ASSASFAPPRT Trigger: TGTCCTCGGAGGTGCAAAGGAGGCGCTGGAGGCTCACCCAGGAACATTCACCCTGTGCATCCGCCAGCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS CCA 72 bp | GCTCTGAGGTCGGGTTCAGAGTCTGCTGAACAGGGATaGGGCGGCCAACAACAGTGTAGATCAGCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: ALRSGSESAEQG*GGQQQCRSASD Trigger: ATCGGAAGCTGATCTACACTGTTGTTGGCCGCCCCATCCCTGTTCAGCAGACTCTGAACCCGACCTCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 |
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| CDS CAA 72 bp | CTGGCACCATGGGTCAAGGCCATCTTAACAAACCCTTaGCGCTGGCGGATGCACAGGGTGAATGTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LAPWVKAILTNP*RWRMHRVNVPG Trigger: CCCAGGAACATTCACCCTGTGCATCCGCCAGCGCAAAGGGTTTGTTAAGATGGCCTTGACCCATGGTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS GCA 72 bp | TACAGGACCAGCATCACCATAATTCCAATGCACACCTaGACGAGCAGGAGGAAGGACAGGACCCACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: YRTSITIIPMHT*TSRRKDRTHCS Trigger: GCTGCAGTGGGTCCTGTCCTTCCTCCTGCTCGTGCAGGTGTGCATTGGAATTATGGTGATGCTGGTCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000152111.2 |
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| CDS CAA 72 bp | AGGCCAGCTTTGGACCCAGTTCCATCTTCTGCCTCCTaGCTCTGGGGTTCTCCAGTCATAGTAAAACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: RPALDPVPSSAS*LWGSPVIVKPD Trigger: GTCTGGTTTTACTATGACTGGAGAACCCCAGAGCAAGGAGGCAGAAGATGGAACTGGGTCCAAAGCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 ENSMUST00000152111.2 |
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| CDS TCA 72 bp | ATTGAGACATTGCCACCTCCATCCTTGCTCAGCACATaGGACAAACTCTCCTTAGACACTGAAACCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: IETLPPPSLLST*DKLSLDTETGP Trigger: CGGGCCGGTTTCAGTGTCTAAGGAGAGTTTGTCTCATGTGCTGAGCAAGGATGGAGGTGGCAATGTCTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CCA 72 bp | GCTTTGGACCCAGTTCCATCTTCTGCCTCCTTGCTCTaGGGTTCTCCAGTCATAGTAAAACCAGACCAGATA | + |
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Preference number: 6 (lower is better) Translates to: ALDPVPSSASLL*GSPVIVKPDQI Trigger: TATCTGGTCTGGTTTTACTATGACTGGAGAACCCCAGAGCAAGGAGGCAGAAGATGGAACTGGGTCCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 ENSMUST00000152111.2 |
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| CDS TCA 72 bp | CTTGCTCAGCACATGAGACAAACTCTCCTTAGACACTaGAACCGGCCCGTTACTCATCAGATATTCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LAQHMRQTLLRH*NRPVTHQIFSE Trigger: TTCCGAGAATATCTGATGAGTAACGGGCCGGTTTCAGTGTCTAAGGAGAGTTTGTCTCATGTGCTGAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CCA 72 bp | TCACCAAAAGAAAATACTGGAACCAAACTGGCACCATaGGTCAAGGCCATCTTAACAAACCCTTTGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPKENTGTKLAP*VKAILTNPLRW Trigger: CCAGCGCAAAGGGTTTGTTAAGATGGCCTTGACCCATGGTGCCAGTTTGGTTCCAGTATTTTCTTTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS CAA 72 bp | AGATATTCTCGGAACAACGGGAAACAGAACCAGATCTaGGCCACGTGGAGATACGATGTAAAGCCAGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: RYSRNNGKQNQI*ATWRYDVKPGN Trigger: ATTTCCTGGCTTTACATCGTATCTCCACGTGGCCAAGATCTGGTTCTGTTTCCCGTTGTTCCGAGAATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CAA 90 bp | TTACTCATCAGATATTCTCGGAACAACGGGAAACAGAACCAGATCTaGGCCACGTGGAGATACGATGTAAAGCCAGGAAATAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLIRYSRNNGKQNQI*ATWRYDVKPGNSFL Trigger: CAAGAAGCTATTTCCTGGCTTTACATCGTATCTCCACGTGGCCAAGATCTGGTTCTGTTTCCCGTTGTTCCGAGAATATCTGATGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CCA 72 bp | AGGGCATTATGCCAAAGTAGTGCTGGAAAATTCCTCTaGCATATATCAGTGGCAAGGCTACTCCCATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RALCQSSAGKFL*HISVARLLPLN Trigger: ATTCAATGGGAGTAGCCTTGCCACTGATATATGCCAGAGGAATTTTCCAGCACTACTTTGGCATAATGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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| CDS CAA 72 bp | ACCAGAGTTTCGTGCTCCGGAATCCCATATTTCCCTTaGTGTTCATTGAACAGTTTCTTTAGCTCCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TRVSCSGIPYFP*CSLNSFFSSSR Trigger: CCTAGAGGAGCTAAAGAAACTGTTCAATGAACACAAAGGGAAATATGGGATTCCGGAGCACGAAACTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 |
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| CDS GCA 72 bp | CAACAACAGTGTAGATCAGCTTCCGATAGGGCATTATaGCAAAGTAGTGCTGGAAAATTCCTCTGGCATATA | + |
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Preference number: 6 (lower is better) Translates to: QQQCRSASDRAL*QSSAGKFLWHI Trigger: TATATGCCAGAGGAATTTTCCAGCACTACTTTGGCATAATGCCCTATCGGAAGCTGATCTACACTGTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 |
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| CDS CAA 90 bp | ATCTTGGCCACGTGGAGATACGATGTAAAGCCAGGAAATAGCTTCTaGAAGTCTGAGTATTTTGTACAAAAATTTCCAAAGGCTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ILATWRYDVKPGNSF*KSEYFVQKFPKAPG Trigger: GCCTGGAGCCTTTGGAAATTTTTGTACAAAATACTCAGACTTCAAGAAGCTATTTCCTGGCTTTACATCGTATCTCCACGTGGCCAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000134947.8 ENSMUST00000149732.8 |
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| CDS CAA 72 bp | GCGTCTTGTATAGTTCGTAGCCAGGAGCCTTTGGGGTaGTTAATTTGCTTATATAGATCATTTTCACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ASCIVRSQEPLG*LICLYRSFSPK Trigger: TTTTGGTGAAAATGATCTATATAAGCAAATTAACAACCCCAAAGGCTCCTGGCTACGAACTATACAAGACGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012331.7 ENSMUST00000113524.8 ENSMUST00000149732.8 |
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