Pregenerated sensors for MOG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076439Ensembl transcript IDs: ENSMUST00000102665.11, ENSMUST00000167275.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCAAGGCTGTGGTCTTGGAAGAAATATCCACCATTTGCAGAGTTaGTGTTCTATAGTTCACAATGATGAAGTGCTGCGTATCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: SQGCGLGRNIHHLQS*CSIVHNDEVLRILV Trigger: AACCAGGATACGCAGCACTTCATCATTGTGAACTATAGAACATCAACTCTGCAAATGGTGGATATTTCTTCCAAGACCACAGCCTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAAGGCTGTGGTCTTGGAAGAAATATCCACCATTTGCAGAGTTGATGTTCTCCCCAAGGACCTGCTaGGCTCTCCTTCCGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QSRLWSWKKYPPFAELMFSPRTC*ALLPLQ Trigger: CTGGAGCGGAAGGAGAGCCCAGCAGGTCCTTGGGGA...GAACATCAACTCTGCAAATGGTGGATATTTCTTCCAAGACCACAGCCTTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCTTTTCTGAGGAAAGACAGTTaGGGGAGGGAAATCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSHQAAKARWYFSGRYSFLRKDS*GREIKF Trigger: GAACTTGATTTCCCTCCCTCAACTGTCTTTCCTCAG...AAAAGAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCTGGCCTTCACCACAGGGTGTTTTCTATAGTCAGACTAACATGGTAAAACAGCAAAGAGGCCAATaGGAAATCCCCAAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TAWPSPQGVFYSQTNMVKQQRGQ*EIPKDL Trigger: CAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTG...TTTTACCATGTTAGTCTGACTATAGAAAACACCCTGTGGTGAAGGCCAGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR-3UTR TCA 90 bp | TTGATATTCTTCCCAGTCAAGGCTGTGGTCTTGGAAGAAATATCCACCATTTGCATTAGAGGAAGGAGCTaGGGAAAGACAGTTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LIFFPVKAVVLEEISTICIRGRS*GKTVEG Trigger: TCCCTCAACTGTCTTTCCTCAGCTCCTTCCTCTAAT...GCAAATGGTGGATATTTCTTCCAAGACCACAGCCTTGACTGGGAAGAATATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR CAA 90 bp | AGATGTGGAAGTCAAAAATTAGAGGAAGGAGCTGAGGAAAGACAGTaGAGGGAGGGAAATCAAGTTCTACTCGGTATCCAGAATGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RCGSQKLEEGAEERQ*REGNQVLLGIQNVS Trigger: AGACACATTCTGGATACCGAGTAGAACTTGATTTCCCTCCCTCAACTGTCTTTCCTCAGCTCCTTCCTCTAATTTTTGACTTCCACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR CAA 90 bp | ACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCTTTaGAATTTTAGCTCCAGGTTTTGGTTCAGGTGCTCATATTCATAC | + |
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Preference number: 2 (lower is better) Translates to: TRLPKQDGISLVGIL*NFSSRFWFRCSYSY Trigger: GTATGAATATGAGCACCTGAACCAAAACCTGGAGCTAAAATTCAAAAGAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR GCA 72 bp | CACAGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTaGTGGGCTCTCCTTCCGCTCCAGGAAGACACAACC | + |
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Preference number: 3 (lower is better) Translates to: HSKEANGKSPRT*WALLPLQEDTT Trigger: GGTTGTGTCTTCCTGGAGCGGAAGGAGAGCCCAGCAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR CCA 72 bp | AGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTGCTaGGCTCTCCTTCCGCTCCAGGAAGACACAACCATC | + |
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Preference number: 3 (lower is better) Translates to: SKEANGKSPRTC*ALLPLQEDTTI Trigger: GATGGTTGTGTCTTCCTGGAGCGGAAGGAGAGCCCAGCAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR-3UTR CAA 90 bp | GCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCGCTGAGGAAAGACAGTaGAGGGAGGGAAATCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: AYPGWQNHSCITLVHRCLAEERQ*REGNQV Trigger: AACTTGATTTCCCTCCCTCAACTGTCTTTCCTCAGC...GAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR CCA 90 bp | CAGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTGCTGGGCTCTCCTTCCGCTCCACCTCCATGCCCGTaGCATTTTTCCCAGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QQRGQWEIPKDLLGSPSAPPPCP*HFSQER Trigger: TCTCTCCTGGGAAAAATGCCACGGGCATGGAGGTGG...AGCGGAAGGAGAGCCCAGCAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR TCA 90 bp | AGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTGCTGGGCTCTCCTTCCGCTCGAGAATCTCACGTTCTaGATCCTAAGGGTAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: SKEANGKSPRTCWALLPLENLTF*ILRVTF Trigger: AAAGGTTACCCTTAGGATTCAGAACGTGAGATTCTC...GAGCGGAAGGAGAGCCCAGCAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR TCA 90 bp | AAGGTCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCGGTAAGAGTGGTCTCTaGAGAAGCAGGTGTAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KVLPPGCQSKMVFLWSVFGKSGL*RSRCSL Trigger: GAGGCTACACCTGCTTCTTCAGAGACCACTCTTACC...GAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR TCA 90 bp | GCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCGCCAGTTGTAGCAGATaGTCAAGGCAACCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AYPGWQNHSCITLVHRCLASCSR*SRQPGV Trigger: GACCCCTGGTTGCCTTGATCATCTGCTACAACTGGC...GAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | TCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCTTTTACCAACCCACCTCCATaGCCGTGGCATTTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSHQAAKARWYFSGRYSFTNPPP*PWHFSQ Trigger: CTGGGAAAAATGCCACGGGCATGGAGGTGGGTTGGT...AAAAGAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | GTAGATTGGAATCTGTCCACAGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTCTTTCAGAAGCTCTGTaGGTCCCCGGTATTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VDWNLSTAKRPMGNPQGPLSEAL*VPGIQV Trigger: CACCTGAATACCGGGGACGCACAGAGCTTCTGAAAG...AGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTGTGGACAGATTCCAATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR CCA 90 bp | CACAATGATGAAGTGCTGCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCGGGAGAGGAAGCAGCTaGGCCAAGAGAAGCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HNDEVLRILVGRITPVLLGRGSS*AKRSST Trigger: TGTGGAGCTTCTCTTGGCCCAGCTGCTTCCTCTCCC...GAGTAATACAGGAGTGATTCTGCCAACCAGGATACGCAGCACTTCATCATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | GCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCCGGTATTCAGGTGCTTaGTCTGCATCTTGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AYPGWQNHSCITLVHRCLRYSGA*SASWSL Trigger: CAAGGACCAAGATGCAGAGCAAGCACCTGAATACCG...GAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | GCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCTTCAGGTGCTTGCTCTaGATCTTGGTCCTTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: AYPGWQNHSCITLVHRCLFRCLL*ILVLAI Trigger: AATGGCAAGGACCAAGATGCAGAGCAAGCACCTGAA...GAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR CCA 90 bp | TCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCTTTTCAACTAAAGCCCGGATaGGATACCCTGGTCCTATCA | + |
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Preference number: 4 (lower is better) Translates to: SSHQAAKARWYFSGRYSFQLKPG*DTLVLS Trigger: TGATAGGACCAGGGTATCCCATCCGGGCTTTAGTTG...AAAAGAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR TCA 90 bp | GTAGATTGGAATCTGTCCACAGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTGTAGCCTCCTTCATCTaGGAATCTCACGTTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: VDWNLSTAKRPMGNPQGPVASFI*ESHVLN Trigger: ATTCAGAACGTGAGATTCTCAGATGAAGGAGGCTAC...AGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTGTGGACAGATTCCAATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | GCGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCATTGTCCTGCATAGCTaGATGACAACTGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: AYPGWQNHSCITLVHRCLIVLHS*MTTGGE Trigger: TTCTCCTCCAGTTGTCATGCAGCTATGCAGGACAAT...GAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | TCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCTTTTCTGCATCTTGGTCCTTaGCATTTCGGTAGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSHQAAKARWYFSGRYSFLHLGP*HFGRGE Trigger: TTCACCTCTACCGAAATGGCAAGGACCAAGATGCAG...AAAAGAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR CAA 72 bp | TCTACTCGGTATCCAGAATGTGTCTGTAGATGTAGATaGGAATCTGTCCACAGCAAAGAGGCCAATGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: STRYPECVCRCR*ESVHSKEANGK Trigger: TTTCCCATTGGCCTCTTTGCTGTGGACAGATTCCAATCTACATCTACAGACACATTCTGGATACCGAGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS-3UTR GCA 90 bp | TATTCTTCCCAGTCAAGGCTGTGGTCTTGGAAGAAATATCCACCATTTGCAGAGCACTTTCAACTCCATTaGTGCCTCTTCTTGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: YSSQSRLWSWKKYPPFAEHFQLH*CLFLVR Trigger: TCTTACCAAGAAGAGGCAGCAATGGAGTTGAAAGTG...CTCTGCAAATGGTGGATATTTCTTCCAAGACCACAGCCTTGACTGGGAAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| 3UTR CAA 72 bp | CCCACATTGATATTCTTCCCAGTCAAGGCTGTGGTCTaGGAAGAAATATCCACCATTTGCAGAGTTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: PTLIFFPVKAVV*EEISTICRVDV Trigger: AACATCAACTCTGCAAATGGTGGATATTTCTTCCAAGACCACAGCCTTGACTGGGAAGAATATCAATGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS GCA 90 bp | GGTGAACCACTCTTGAGAAGGGAGAACGGTACCAACCCACCTCCATaGCCGTGGCATTTTTCCCAGGAGAGATGCGGCACGGCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GEPLLRRENGTNPPP*PWHFSQERCGTAAL Trigger: CAGAGCTGCCGTGCCGCATCTCTCCTGGGAAAAATGCCACGGGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGGTTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS CCA 90 bp | CCACTCTTGAGAAGGGAGAACGGTACCAACCCACCTCCATGCCCGTaGCATTTTTCCCAGGAGAGATGCGGCACGGCAGCTCTGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PLLRRENGTNPPPCP*HFSQERCGTAALLH Trigger: ATGAAGCAGAGCTGCCGTGCCGCATCTCTCCTGGGAAAAATGCCACGGGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS GCA 90 bp | CTCAGTCTGTGCTGCAGGAAGAGGAATACAAGGCCTACAGAGACCTaGAGGAGGATCGTAGGCACAAGTGCGATGAGAGTCAGCACACCG | + |
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Preference number: 5 (lower is better) Translates to: LSLCCRKRNTRPTET*RRIVGTSAMRVSTP Trigger: CGGTGTGCTGACTCTCATCGCACTTGTGCCTACGATCCTCCTGCAGGTCTCTGTAGGCCTTGTATTCCTCTTCCTGCAGCACAGACTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 90 bp | CTCTGCATCTTGGTCCTTGCCATTTCGGTAGAGGTGAACCACTCTTaGGAAGGGAGAACGGTACCAACCCACCTCCATGCCCGTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: LCILVLAISVEVNHS*EGRTVPTHLHARGI Trigger: AATGCCACGGGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGGTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS-3UTR CAA 90 bp | TGGAATCTGTCCACAGCAAAGAGGCCAATGGGAAATCCCCAAGGACCTGCTGGGCCGGTATTCAGGTGCTaGCTCTGCATCTTGGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: WNLSTAKRPMGNPQGPAGPVFRC*LCILVL Trigger: AAGGACCAAGATGCAGAGCAAGCACCTGAATACCGG...CCCAGCAGGTCCTTGGGGATTTCCCATTGGCCTCTTTGCTGTGGACAGATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS TCA 90 bp | GGGATACCCTGGTCCTATCACTCTGAATTGTCCTGCATAGCTGCATaGCAACTGGAGGAGAAGGAGGAGGAGAAGGGAGAGGAAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GIPWSYHSELSCIAA*QLEEKEEEKGEEAA Trigger: AGCTGCTTCCTCTCCCTTCTCCTCCTCCTTCTCCTCCAGTTGTCATGCAGCTATGCAGGACAATTCAGAGTGATAGGACCAGGGTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 90 bp | CATCCCCAACTAAAGCCCGGATGGGATACCCTGGTCCTATCACTCTaGATTGTCCTGCATAGCTGCATGACAACTGGAGGAGAAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: HPQLKPGWDTLVLSL*IVLHSCMTTGGEGG Trigger: TCCTCCTTCTCCTCCAGTTGTCATGCAGCTATGCAGGACAATTCAGAGTGATAGGACCAGGGTATCCCATCCGGGCTTTAGTTGGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS GCA 90 bp | ACTGATAGTCTCTTTCAGAAGCTCTGTGCGTCCCCGGTATTCAGGTaGTTGCTCTGCATCTTGGTCCTTGCCATTTCGGTAGAGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TDSLFQKLCASPVFR*LLCILVLAISVEVN Trigger: GTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAGCAAGCACCTGAATACCGGGGACGCACAGAGCTTCTGAAAGAGACTATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS-3UTR CAA 90 bp | CGTATCCTGGTTGGCAGAATCACTCCTGTATTACTCTGGTGCATAGGTGTCTCCAGAGGTGAACCACTCTaGAGAAGGGAGAACGGTACC | + |
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Preference number: 5 (lower is better) Translates to: RILVGRITPVLLWCIGVSRGEPL*RRENGT Trigger: GGTACCGTTCTCCCTTCTCAAGAGTGGTTCACCTCT...GGAGACACCTATGCACCAGAGTAATACAGGAGTGATTCTGCCAACCAGGATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS GCA 90 bp | GGGGTTGACCCAATAGAAGGGATCTTCCACTTTCAACTCCATTGCTaGCTCTTCTTGGTAAGAGTGGTCTCTGAAGAAGCAGGTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: GVDPIEGIFHFQLHC*LFLVRVVSEEAGVA Trigger: GGCTACACCTGCTTCTTCAGAGACCACTCTTACCAAGAAGAGGCAGCAATGGAGTTGAAAGTGGAAGATCCCTTCTATTGGGTCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTCCCACCAGGCTGCCAAAGCAAGATGGTATTTCTCTGGTCGGTATTCCATTGCTGCCTCTTCTaGGTAAGAGTGGTCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: KVLPPGCQSKMVFLWSVFHCCLF*VRVVSE Trigger: TTCAGAGACCACTCTTACCAAGAAGAGGCAGCAATG...GAATACCGACCAGAGAAATACCATCTTGCTTTGGCAGCCTGGTGGGAGGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS GCA 90 bp | ACCGGGGTTGACCCAATAGAAGGGATCTTCCACTTTCAACTCCATTaGTGCCTCTTCTTGGTAAGAGTGGTCTCTGAAGAAGCAGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: TGVDPIEGIFHFQLH*CLFLVRVVSEEAGV Trigger: TACACCTGCTTCTTCAGAGACCACTCTTACCAAGAAGAGGCAGCAATGGAGTTGAAAGTGGAAGATCCCTTCTATTGGGTCAACCCCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 90 bp | CCACTTTCAACTCCATTGCTGCCTCTTCTTGGTAAGAGTGGTCTCTaGAGAAGCAGGTGTAGCCTCCTTCATCTGAGAATCTCACGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLSTPLLPLLGKSGL*RSRCSLLHLRISRS Trigger: AGAACGTGAGATTCTCAGATGAAGGAGGCTACACCTGCTTCTTCAGAGACCACTCTTACCAAGAAGAGGCAGCAATGGAGTTGAAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS-3UTR CAA 90 bp | TCTACTCGGTATCCAGAATGTGTCTGTAGATGTAGATTGGAATCTGTCCACAGCTGCTTGCTCTGCATCTaGGTCCTTGCCATTTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: STRYPECVCRCRLESVHSCLLCI*VLAISV Trigger: TACCGAAATGGCAAGGACCAAGATGCAGAGCAAGCA...GCTGTGGACAGATTCCAATCTACATCTACAGACACATTCTGGATACCGAGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS TCA 90 bp | ACAATAACAAACAGTGTTATCTTCCAGCAGGGCACCCTCAGGAAGTaGGGATCAAAAGTCCGATGGAGATTCTCTACTTCTGCACGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TITNSVIFQQGTLRK*GSKVRWRFSTSARS Trigger: ACTTCGTGCAGAAGTAGAGAATCTCCATCGGACTTTTGATCCTCACTTCCTGAGGGTGCCCTGCTGGAAGATAACACTGTTTGTTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS CCA 72 bp | AGAAGGGAGAACGGTACCAACCCACCTCCATGCCCGTaGCATTTTTCCCAGGAGAGATGCGGCACGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRENGTNPPPCP*HFSQERCGTAA Trigger: AGCTGCCGTGCCGCATCTCTCCTGGGAAAAATGCCACGGGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS GCA 72 bp | GCCTACAGAGACCTGCAGGAGGATCGTAGGCACAAGTaGGATGAGAGTCAGCACACCGGGGTTGACCCAATA | + |
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Preference number: 6 (lower is better) Translates to: AYRDLQEDRRHK*DESQHTGVDPI Trigger: TATTGGGTCAACCCCGGTGTGCTGACTCTCATCGCACTTGTGCCTACGATCCTCCTGCAGGTCTCTGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS CAA 90 bp | GCTCTGCATCTTGGTCCTTGCCATTTCGGTAGAGGTGAACCACTCTaGAGAAGGGAGAACGGTACCAACCCACCTCCATGCCCGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: ALHLGPCHFGRGEPL*RRENGTNPPPCPWH Trigger: ATGCCACGGGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGGTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 72 bp | TTGGTCCTTGCCATTTCGGTAGAGGTGAACCACTCTTaGGAAGGGAGAACGGTACCAACCCACCTCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: LVLAISVEVNHS*EGRTVPTHLHA Trigger: GGCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGGTTCACCTCTACCGAAATGGCAAGGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS GCA 72 bp | AAGCTCTGTGCGTCCCCGGTATTCAGGTGCTTGCTCTaGATCTTGGTCCTTGCCATTTCGGTAGAGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: KLCASPVFRCLL*ILVLAISVEVN Trigger: GTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAGCAAGCACCTGAATACCGGGGACGCACAGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS CAA 72 bp | CTTGGTCCTTGCCATTTCGGTAGAGGTGAACCACTCTaGAGAAGGGAGAACGGTACCAACCCACCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: LGPCHFGRGEPL*RRENGTNPPPC Trigger: GCATGGAGGTGGGTTGGTACCGTTCTCCCTTCTCAAGAGTGGTTCACCTCTACCGAAATGGCAAGGACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS CAA 72 bp | TGTGCGTCCCCGGTATTCAGGTGCTTGCTCTGCATCTaGGTCCTTGCCATTTCGGTAGAGGTGAACCACTCT | + |
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Preference number: 6 (lower is better) Translates to: CASPVFRCLLCI*VLAISVEVNHS Trigger: AGAGTGGTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAGCAAGCACCTGAATACCGGGGACGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS CAA 90 bp | GATAGTCTCTTTCAGAAGCTCTGTGCGTCCCCGGTATTCAGGTGCTaGCTCTGCATCTTGGTCCTTGCCATTTCGGTAGAGGTGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: DSLFQKLCASPVFRC*LCILVLAISVEVNH Trigger: GTGGTTCACCTCTACCGAAATGGCAAGGACCAAGATGCAGAGCAAGCACCTGAATACCGGGGACGCACAGAGCTTCTGAAAGAGACTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 72 bp | TGGTCCTATCACTCTGAATTGTCCTGCATAGCTGCATaGCAACTGGAGGAGAAGGAGGAGGAGAAGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: WSYHSELSCIAA*QLEEKEEEKGE Trigger: CTCTCCCTTCTCCTCCTCCTTCTCCTCCAGTTGTCATGCAGCTATGCAGGACAATTCAGAGTGATAGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 72 bp | CTAAAGCCCGGATGGGATACCCTGGTCCTATCACTCTaGATTGTCCTGCATAGCTGCATGACAACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LKPGWDTLVLSL*IVLHSCMTTGG Trigger: TCCTCCAGTTGTCATGCAGCTATGCAGGACAATTCAGAGTGATAGGACCAGGGTATCCCATCCGGGCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS TCA 72 bp | AACAGTGTTATCTTCCAGCAGGGCACCCTCAGGAAGTaGGGATCAAAAGTCCGATGGAGATTCTCTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: NSVIFQQGTLRK*GSKVRWRFSTS Trigger: AGAAGTAGAGAATCTCCATCGGACTTTTGATCCTCACTTCCTGAGGGTGCCCTGCTGGAAGATAACACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS GCA 72 bp | GTGAGGATCAAAAGTCCGATGGAGATTCTCTACTTCTaGACGAAGTTTTCCTCTCAGTCTGTGCTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VRIKSPMEILYF*TKFSSQSVLQE Trigger: TTCCTGCAGCACAGACTGAGAGGAAAACTTCGTGCAGAAGTAGAGAATCTCCATCGGACTTTTGATCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102665.11 |
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| CDS GCA 72 bp | GACCCAATAGAAGGGATCTTCCACTTTCAACTCCATTaGTGCCTCTTCTTGGTAAGAGTGGTCTCTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DPIEGIFHFQLH*CLFLVRVVSEE Trigger: TTCTTCAGAGACCACTCTTACCAAGAAGAGGCAGCAATGGAGTTGAAAGTGGAAGATCCCTTCTATTGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102665.11 ENSMUST00000167275.3 |
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| CDS GCA 72 bp | AAACTGTCCAAAAGTCCGATGGAGATTCTCTACTTCTaGACGAAGTTTTCCTCTCAGTCTGTGCTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KLSKSPMEILYF*TKFSSQSVLQE Trigger: TTCCTGCAGCACAGACTGAGAGGAAAACTTCGTGCAGAAGTAGAGAATCTCCATCGGACTTTTGGACAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167275.3 |
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| CDS CCA 72 bp | TTTCTTAGCTCTTCAAGAAACTGTCCAAAAGTCCGATaGAGATTCTCTACTTCTGCACGAAGTTTTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSSSRNCPKVR*RFSTSARSFPL Trigger: GAGAGGAAAACTTCGTGCAGAAGTAGAGAATCTCCATCGGACTTTTGGACAGTTTCTTGAAGAGCTAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167275.3 |
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