Pregenerated sensors for MOCS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074576Ensembl transcript IDs: ENSMUST00000099071.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAACTTTATGTTTTGACTGCATGCATATCTGTACACCAAGACCCTaGCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGATGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: KTLCFDCMHICTPRP*PELEESRRQHMMSM Trigger: CATGGACATCATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGCAGTCAAAACATAAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| 3UTR-3UTR GCA 90 bp | GCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACGAGTTAAGCCATCTCTaGAACCTCACAAAGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: ACISVHQDPARSWRSRGDELSHL*NLTKKT Trigger: GGTCTTCTTTGTGAGGTTGCAGAGATGGCTTAACTC...GTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| 3UTR-3UTR CAA 90 bp | TACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGATGTCGTACCAAGTCACATGTaGAAGGTGCTGCACAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: YTKTLPGAGGVEETAYDVVPSHM*KVLHKC Trigger: GCACTTGTGCAGCACCTTCAACATGTGACTTGGTAC...GACATCATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| 3UTR GCA 72 bp | GTCGTACCAAGTCACATGTTGAAGGTGCTGCACAAGTaGCCAAAAGTAGCTCTCAGAGGCAATGCTATCCTC | + |
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Preference number: 3 (lower is better) Translates to: VVPSHMLKVLHK*PKVALRGNAIL Trigger: GAGGATAGCATTGCCTCTGAGAGCTACTTTTGGGCACTTGTGCAGCACCTTCAACATGTGACTTGGTACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CCA 90 bp | ATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGTCCCCGTGCAGGACCTaGCGGGCCAGGTTGCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: ICTPRPCPELEESRRQHMSPCRT*RARLLV Trigger: GACGAGCAACCTGGCCCGCCAGGTCCTGCACGGGGA...CATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR GCA 90 bp | ATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGCCTGGCGGGCCAGGTTaGTCGTCTCCACCACGTCGT | + |
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Preference number: 4 (lower is better) Translates to: ICTPRPCPELEESRRQHMPGGPG*SSPPRR Trigger: ACGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGG...CATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CCA 90 bp | ATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGGTCTCCACCACGTCGTaGTCCACCAGCCCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ICTPRPCPELEESRRQHMVSTTS*STSPSL Trigger: CAGGCTGGGGCTGGTGGACCACGACGTGGTGGAGAC...CATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR GCA 90 bp | CTGCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGCGAAGAGCAGCATGCTaGCGCTGTAGGAGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LHAYLYTKTLPGAGGVEERRAAC*RCRRSR Trigger: TCGGCTCCTCCTACAGCGGCAGCATGCTGCTCTTCG...CTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR TCA 90 bp | TGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATGTCCACCTCTACTTaGGGCCGGACGTCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: CISVHQDPARSWRSRGDSMSTST*GRTSSN Trigger: GTTGCTGGACGTCCGGCCTCAAGTAGAGGTGGACAT...GCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR GCA 90 bp | ATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACAGCATATGGGGATGTGGAGAGAGTaGGGCAGGCGACAGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: ICTPRPCPELEESRRQHMGMWRE*GRRQMS Trigger: GGACATCTGTCGCCTGCCGCACTCTCTCCACATCCC...CATATGCTGTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR GCA 90 bp | CTTTATGTTTTGACTGCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGGAGCACGCCGCCGTCTaGACAGTTGGTCACTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LYVLTACISVHQDPARSWEHAAV*TVGHCL Trigger: GAGACAGTGACCAACTGTGCAGACGGCGGCGTGCTC...CCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGCAGTCAAAACATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR GCA 90 bp | TGTTTTGACTGCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGAGAGCAACCCCTTCCTaGGACTCCTGCTTCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: CFDCMHICTPRPCPELEERATPS*DSCFPF Trigger: GAAAGGGAAGCAGGAGTCGCAGGAAGGGGTTGCTCT...CTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGCAGTCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CCA 90 bp | CTTTATGTTTTGACTGCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGACGTCCAGCAACACATaGGGCGCCCCGGAATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LYVLTACISVHQDPARSWTSSNT*GAPESR Trigger: TCTGGATTCCGGGGCGCCCCATGTGTTGCTGGACGT...CCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGCAGTCAAAACATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| 3UTR CAA 72 bp | TCGAGGAGACAGCATATGATGTCCATGGAAATGGAGTaGCAGAGCCAACTCATGAATTCTGGGAGTCAAACC | + |
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Preference number: 4 (lower is better) Translates to: SRRQHMMSMEME*QSQLMNSGSQT Trigger: GGTTTGACTCCCAGAATTCATGAGTTGGCTCTGCAACTCCATTTCCATGGACATCATATGCTGTCTCCTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR TCA 90 bp | TCTCCGTTTATTTATTCGGAGACCGTGAATCCAGGCTCTTCCCTACATTATTTTTCCCTGCGTTCCAACTaGCTCAAAGGGATGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPFIYSETVNPGSSLHYFSLRSN*LKGMWR Trigger: TCTCCACATCCCTTTGAGTCAGTTGGAACGCAGGGA...AAAATAATGTAGGGAAGAGCCTGGATTCACGGTCTCCGAATAAATAAACGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS TCA 90 bp | GCAGCATGCTGCCGCTGTAGGAGGAGCCGAGGCCGGCGGCGATCTTaGGCACCTCGAGGGCCTGCGCGCAGCCTAGCACGCCGGGCACCG | + |
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Preference number: 5 (lower is better) Translates to: AACCRCRRSRGRRRS*APRGPARSLARRAP Trigger: CGGTGCCCGGCGTGCTAGGCTGCGCGCAGGCCCTCGAGGTGCTCAAGATCGCCGCCGGCCTCGGCTCCTCCTACAGCGGCAGCATGCTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS GCA 90 bp | TCTCGCCGGCCTGCGCCTCCCCGTGCAGGACCTGGCGGGCCAGGTTaGTCGTCTCCACCACGTCGTGGTCCACCAGCCCCAGCCTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: SRRPAPPRAGPGGPG*SSPPRRGPPAPACL Trigger: TAGGCAGGCTGGGGCTGGTGGACCACGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGGTCCTGCACGGGGAGGCGCAGGCCGGCGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CCA 90 bp | CGTCGTGGTGGTAGACGGTCATCTGGCCCTCGAAGCGCAGCGCGCTaGCCGACACTAGCGGCCGGCCGGCCAGCACGCACGCGTCGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RRGGRRSSGPRSAAR*PTLAAGRPARTRRS Trigger: TGAACGACGCGTGCGTGCTGGCCGGCCGGCCGCTAGTGTCGGCCAGCGCGCTGCGCTTCGAGGGCCAGATGACCGTCTACCACCACGACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CAA 90 bp | GCATGCATATCTGTACACCAAGACCCTGCCCGGAGCTGGAGGAGTCGAGGAGACGAGTCGTTTCCCAGTTaGCAAATCACATACACCGGG | + |
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Preference number: 5 (lower is better) Translates to: ACISVHQDPARSWRSRGDESFPS*QITYTG Trigger: CCCGGTGTATGTGATTTGCAAACTGGGAAACGACTC...GTCTCCTCGACTCCTCCAGCTCCGGGCAGGGTCTTGGTGTACAGATATGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CAA 90 bp | GGGGAGGTCTCCGTTTATTTATTCGGAGACCGTGAATCCAGGCTCTTCCCTACAGATGTCCACCTCTACTaGAGGCCGGACGTCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GEVSVYLFGDRESRLFPTDVHLY*RPDVQQ Trigger: TTGCTGGACGTCCGGCCTCAAGTAGAGGTGGACATC...TGTAGGGAAGAGCCTGGATTCACGGTCTCCGAATAAATAAACGGAGACCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS-3UTR CAA 90 bp | TCTCCGTTTATTTATTCGGAGACCGTGAATCCAGGCTCTTCCCTACATTATTTTACCTGGCGGGCCAGGTaGCTCGTCTCCACCACGTCG | + |
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Preference number: 5 (lower is better) Translates to: SPFIYSETVNPGSSLHYFTWRAR*LVSTTS Trigger: CGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGGT...AAAATAATGTAGGGAAGAGCCTGGATTCACGGTCTCCGAATAAATAAACGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CAA 90 bp | ACCGCCGAGTTGAGACGGCGCAGCGCCGCGGCCGCCGAGCGAGCCTaGCTCTCGCCGGCCTGCGCCTCCCCGTGCAGGACCTGGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TAELRRRSAAAAERA*LSPACASPCRTWRA Trigger: GGCCCGCCAGGTCCTGCACGGGGAGGCGCAGGCCGGCGAGAGCAAGGCTCGCTCGGCGGCCGCGGCGCTGCGCCGTCTCAACTCGGCGGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS TCA 72 bp | GCGCGCGCGGGTACGCCACGCACTCCACCGCCGAGTTaGGACGGCGCAGCGCCGCGGCCGCCGAGCGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ARAGTPRTPPPS*DGAAPRPPSEP Trigger: AGGCTCGCTCGGCGGCCGCGGCGCTGCGCCGTCTCAACTCGGCGGTGGAGTGCGTGGCGTACCCGCGCGCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS GCA 72 bp | GCCGCGGCCGCCGAGCGAGCCTTGCTCTCGCCGGCCTaGGCCTCCCCGTGCAGGACCTGGCGGGCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AAAAERALLSPA*ASPCRTWRARL Trigger: CAACCTGGCCCGCCAGGTCCTGCACGGGGAGGCGCAGGCCGGCGAGAGCAAGGCTCGCTCGGCGGCCGCGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CAA 72 bp | TTGAGACGGCGCAGCGCCGCGGCCGCCGAGCGAGCCTaGCTCTCGCCGGCCTGCGCCTCCCCGTGCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: LRRRSAAAAERA*LSPACASPCRT Trigger: GGTCCTGCACGGGGAGGCGCAGGCCGGCGAGAGCAAGGCTCGCTCGGCGGCCGCGGCGCTGCGCCGTCTCAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CAA 90 bp | TCCTCGGCGAGCGCGCGCGGGTACGCCACGCACTCCACCGCCGAGTaGAGACGGCGCAGCGCCGCGGCCGCCGAGCGAGCCTTGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSASARGYATHSTAE*RRRSAAAAERALLS Trigger: CGAGAGCAAGGCTCGCTCGGCGGCCGCGGCGCTGCGCCGTCTCAACTCGGCGGTGGAGTGCGTGGCGTACCCGCGCGCGCTCGCCGAGGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CCA 72 bp | GGTAGACGGTCATCTGGCCCTCGAAGCGCAGCGCGCTaGCCGACACTAGCGGCCGGCCGGCCAGCACGCACG | + |
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Preference number: 6 (lower is better) Translates to: GRRSSGPRSAAR*PTLAAGRPART Trigger: CGTGCGTGCTGGCCGGCCGGCCGCTAGTGTCGGCCAGCGCGCTGCGCTTCGAGGGCCAGATGACCGTCTACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CAA 72 bp | GCCTGCGCCTCCCCGTGCAGGACCTGGCGGGCCAGGTaGCTCGTCTCCACCACGTCGTGGTCCACCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: ACASPCRTWRAR*LVSTTSWSTSP Trigger: GGGGCTGGTGGACCACGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGGTCCTGCACGGGGAGGCGCAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS CAA 90 bp | CTCTCGCCGGCCTGCGCCTCCCCGTGCAGGACCTGGCGGGCCAGGTaGCTCGTCTCCACCACGTCGTGGTCCACCAGCCCCAGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSPACASPCRTWRAR*LVSTTSWSTSPSLP Trigger: AGGCAGGCTGGGGCTGGTGGACCACGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGGTCCTGCACGGGGAGGCGCAGGCCGGCGAGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS GCA 72 bp | CCTGCGCCTCCCCGTGCAGGACCTGGCGGGCCAGGTTaGTCGTCTCCACCACGTCGTGGTCCACCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PAPPRAGPGGPG*SSPPRRGPPAP Trigger: TGGGGCTGGTGGACCACGACGTGGTGGAGACGAGCAACCTGGCCCGCCAGGTCCTGCACGGGGAGGCGCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS GCA 72 bp | ACATACACCGGGAGAGCAACCCCTTCCTGCGACTCCTaGTTCCCTTTCCGGAGGGCAGCCCCTAAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TYTGRATPSCDS*FPFRRAAPKSF Trigger: GAAACTCTTAGGGGCTGCCCTCCGGAAAGGGAAGCAGGAGTCGCAGGAAGGGGTTGCTCTCCCGGTGTATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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| CDS GCA 72 bp | GTTAAAGAGTCTAACTCCGGCACTGCCGTTAAGGACTaGAGGACCTTCACAGCTTTCTGGGAGTCGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VKESNSGTAVKD*RTFTAFWESFP Trigger: GGGAAACGACTCCCAGAAAGCTGTGAAGGTCCTGCAGTCCTTAACGGCAGTGCCGGAGTTAGACTCTTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099071.5 |
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