Pregenerated sensors for MOCS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015536Ensembl transcript IDs: ENSMUST00000015680.11, ENSMUST00000164737.8, ENSMUST00000164871.3, ENSMUST00000165022.9, ENSMUST00000166104.9, ENSMUST00000166176.9, ENSMUST00000183407.2, ENSMUST00000184046.8, ENSMUST00000184214.8, ENSMUST00000184245.8, ENSMUST00000184335.8, ENSMUST00000184672.8, ENSMUST00000184781.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGCCCACACCAGCCTCAGCAAAGCAGCAAGCCTGGAGCAGAATaGGAGCTGGGAGGAAGGCTACTCTGTTGGATCGCAGAGGTAACT | + |
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Preference number: 1 (lower is better) Translates to: ACPHQPQQSSKPGAE*ELGGRLLCWIAEVT Trigger: AGTTACCTCTGCGATCCAACAGAGTAGCCTTCCTCCCAGCTCCCATTCTGCTCCAGGCTTGCTGCTTTGCTGAGGCTGGTGTGGGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR TCA 90 bp | CAAGGCTCGGAGGAAGATCAGGAAGGTTCTAGACTGAGAGAAGGCTaGGGCAGACAGATGGCCATCGATCACTACGGGAGGGGAATAGGG | + |
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Preference number: 1 (lower is better) Translates to: QGSEEDQEGSRLREG*GRQMAIDHYGRGIG Trigger: CCCTATTCCCCTCCCGTAGTGATCGATGGCCATCTGTCTGCCTCAGCCTTCTCTCAGTCTAGAACCTTCCTGATCTTCCTCCGAGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR CCA 90 bp | CGTAGCTCACGGCTTCGAGGGACGCGGCTCTGTGAGCCAAGCCGATaGAATACTGCTATGTGTCTCACGGGCCATTTCTGTCTAATGTCA | + |
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Preference number: 1 (lower is better) Translates to: RSSRLRGTRLCEPSR*NTAMCLTGHFCLMS Trigger: TGACATTAGACAGAAATGGCCCGTGAGACACATAGCAGTATTCCATCGGCTTGGCTCACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183407.2 |
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| 3UTR CCA 90 bp | CAAGGCATCTGGAGCATACACATGAGCATACACATGAGCTCACGATaGTCGTGTTTCCTGCGGGAAGTCTCCTCAGAACCACAGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: QGIWSIHMSIHMSSR*SCFLREVSSEPQPQ Trigger: CTGTGGCTGTGGTTCTGAGGAGACTTCCCGCAGGAAACACGACCATCGTGAGCTCATGTGTATGCTCATGTGTATGCTCCAGATGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR TCA 90 bp | CACATAAAGAGCAAGGCTCGGAGGAAGATCAGGAAGGTTCTAGACTaGGAGAAGGCTGAGGCAGACAGATGGCCATCGATCACTACGGGA | + |
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Preference number: 1 (lower is better) Translates to: HIKSKARRKIRKVLD*EKAEADRWPSITTG Trigger: TCCCGTAGTGATCGATGGCCATCTGTCTGCCTCAGCCTTCTCTCAGTCTAGAACCTTCCTGATCTTCCTCCGAGCCTTGCTCTTTATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR CCA 90 bp | TCAAGCCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATaGCGTAGCTCACGGCTTCGAGGGACGCGGCTCTGTGAGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSPFSIWAPWLLKNQ*RSSRLRGTRLCELK Trigger: CTTCAGCTCACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGGCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165022.9 |
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| 3UTR TCA 90 bp | TACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACTGTaGCACTTCCCCCACAGAGAGCTTCTCGGCAGTGAACTGTATTAT | + |
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Preference number: 1 (lower is better) Translates to: YKERHCTTQRGHHQL*HFPHRELLGSELYY Trigger: ATAATACAGTTCACTGCCGAGAAGCTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR GCA 90 bp | ATTCCGGTTCTTCCAGCACGTCTCAGGTCACATCCTACATCTGCGTaGCAGAGACTTAAAAGCACAGGCTGGGTCCCACACTGTATAAAG | + |
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Preference number: 1 (lower is better) Translates to: IPVLPARLRSHPTSA*QRLKSTGWVPHCIK Trigger: CTTTATACAGTGTGGGACCCAGCCTGTGCTTTTAAGTCTCTGGCACGCAGATGTAGGATGTGACCTGAGACGTGCTGGAAGAACCGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR CCA 90 bp | ATATTTCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATaGCGTAGCTCACGGCTTCGAGGGACGCGGCTCTGTGAGCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: IFPFSIWAPWLLKNQ*RSSRLRGTRLCEPS Trigger: GCTTGGCTCACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGAAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183407.2 |
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| 3UTR GCA 90 bp | ACTCCTGCTACGGTAAGGAATAGTGGATCATCTGTTGGATTCCAGTaGTGGGCCCTGCAAACTTTCAACGAGGTTCTATTCCGGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: TPATVRNSGSSVGFQ*WALQTFNEVLFRFF Trigger: GAAGAACCGGAATAGAACCTCGTTGAAAGTTTGCAGGGCCCAGCACTGGAATCCAACAGATGATCCACTATTCCTTACCGTAGCAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR CCA 90 bp | ATATTTCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATaGCGTAGCTCACGGCTTCGAGGGACGCGGCTCTGTGAGCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: IFPFSIWAPWLLKNQ*RSSRLRGTRLCELK Trigger: CTTCAGCTCACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGAAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| 3UTR CCA 90 bp | TCTTATCACAGGTTTAAGTCAAGCCCTTTTTCCATATGGGCACCTTaGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAGGGACG | + |
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Preference number: 1 (lower is better) Translates to: SYHRFKSSPFSIWAP*LLKNQWRSSRLRGT Trigger: CGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGGCTTGACTTAAACCTGTGATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165022.9 |
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| 3UTR CCA 90 bp | TACTCAAAGGATAAAAATCTAGAGGCTCTAGATGCCGTCAATGAGTaGACATCTGCTACTGTCTCGTGTGCAGACAAGAGCCTGTCCATT | + |
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Preference number: 1 (lower is better) Translates to: YSKDKNLEALDAVNE*TSATVSCADKSLSI Trigger: AATGGACAGGCTCTTGTCTGCACACGAGACAGTAGCAGATGTCCACTCATTGACGGCATCTAGAGCCTCTAGATTTTTATCCTTTGAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR CCA 90 bp | TATTCATTCGGTAAGTATTTGAGAACATACTATAACCTCATGCACTaGTTAGGCACCTTGGTGAACCTCGTGCAGCTGAGGCTAACGGAG | + |
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Preference number: 1 (lower is better) Translates to: YSFGKYLRTYYNLMH*LGTLVNLVQLRLTE Trigger: CTCCGTTAGCCTCAGCTGCACGAGGTTCACCAAGGTGCCTAACCAGTGCATGAGGTTATAGTATGTTCTCAAATACTTACCGAATGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR TCA 90 bp | AACCACTTCTCTCAAAACATTCTGAAGCCATATTGTGACCTTGCATaGCCTTACTCAAAGGATAAAAATCTAGAGGCTCTAGATGCCGTC | + |
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Preference number: 1 (lower is better) Translates to: NHFSQNILKPYCDLA*PYSKDKNLEALDAV Trigger: GACGGCATCTAGAGCCTCTAGATTTTTATCCTTTGAGTAAGGTCATGCAAGGTCACAATATGGCTTCAGAATGTTTTGAGAGAAGTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGACAGCTGAAGGTAAAAGGAAGGCTGCAGCGCACTGCGAGCTGGTTAGTAGGGACGCGGCTCTGTaGGCTGAAGACACAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: PETAEGKRKAAAHCELVSRDAAL*AEDTAI Trigger: TATTGCTGTGTCTTCAGCTCACAGAGCCGCGTCCCT...ACTAACCAGCTCGCAGTGCGCTGCAGCCTTCCTTTTACCTTCAGCTGTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | AGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGGAGGGACGCGGCTCTGTaGGCTGAAGACACAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: STLWDSKVFLRQLKVKGRRDAAL*AEDTAI Trigger: TATTGCTGTGTCTTCAGCTCACAGAGCCGCGTCCCT...CCTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCGCACCACACTTGACTAGTCACCAGCTGCCCAGAAGCACTCTTTGTTTCGCTCTCAGTACACTCTaGGACAGCAAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSAPHLTSHQLPRSTLCFALSTL*DSKVFL Trigger: CAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGC...GAAACAAAGAGTGCTTCTGGGCAGCTGGTGACTAGTCAAGTGTGGTGCGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGGCTCTCAGTACACTCTaGGACAGCAAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QYTLGQQGLPETAEGKRKALSTL*DSKVFL Trigger: CAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGC...CTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | AGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGGGCTCTCAGTACACTCTaGGACAGCAAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: STLWDSKVFLRQLKVKGRALSTL*DSKVFL Trigger: CAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGC...CCTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGACAGCTGAAGGTAAAAGGAAGGCTGCAGCGCACTGCGAGCTGGTTAGTTTAGTCACAGAAGGCTaGGTCTATTGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: PETAEGKRKAAAHCELVSLVTEG*VYCRHL Trigger: AAGATGTCTGCAATAGACTCAGCCTTCTGTGACTAA...ACTAACCAGCTCGCAGTGCGCTGCAGCCTTCCTTTTACCTTCAGCTGTCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAGCTCTCAGTACACTCTaGGACAGCAAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SIWAPWLLKNQWRSSRLRALSTL*DSKVFL Trigger: CAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGC...TCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCTGGGAGGAAGGCTACTCTGTTGGATCGCAGAGGTAACTCTGGGACCTTCCATATGGGCACCTTaGCTTTTAAAGAATCAATGG | + |
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Preference number: 2 (lower is better) Translates to: WELGGRLLCWIAEVTLGPSIWAP*LLKNQW Trigger: CCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA...AGGTCCCAGAGTTACCTCTGCGATCCAACAGAGTAGCCTTCCTCCCAGCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGCATCCCACACACTCATaGACTTGGCTATTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: QYTLGQQGLPETAEGKRKHPTHS*TWLFSV Trigger: AACGGAGAATAGCCAAGTGCATGAGTGTGTGGGATG...CTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000015680.11 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAACATCCCACACACTCATaGACTTGGCTATTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: CSQYTLGQQGLPETAEGKHPTHS*TWLFSV Trigger: AACGGAGAATAGCCAAGTGCATGAGTGTGTGGGATG...TTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000015680.11 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | AGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGGTTAGTCACAGAAGGCTaGGTCTATTGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: STLWDSKVFLRQLKVKGRLVTEG*VYCRHL Trigger: AAGATGTCTGCAATAGACTCAGCCTTCTGTGACTAA...CCTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCTTGCCTTCAAAGTTATTTCTTGTAGTCCCTACAAAGAGAGACACTGCAGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TFLPSKLFLVVPTKRDTAGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...TGCAGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTTTGAAGGCAAGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGGGTAATGTTCAAAGTTaGGATCCAGATGGCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SQYTLGQQGLPETAEGKRGNVQS*DPDGSD Trigger: ATCTGAGCCATCTGGATCTCAACTTTGAACATTACC...CCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAAGCATCACGACACCACATTATAGAACCTAAGTGTATTTCACTTGTCAAAGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TQASRHHIIEPKCISLVKGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...TTTGACAAGTGAAATACACTTAGGTTCTATAATGTGGTGTCGTGATGCTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTATTGCAGACATCTTATCACAGGTTTAAGTCAAGCCCTTTCTCCCCATCTTCATCCCACACACTCATaGACTTGGCTATTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: VYCRHLITGLSQALSPHLHPTHS*TWLFSV Trigger: AACGGAGAATAGCCAAGTGCATGAGTGTGTGGGATG...AAGATGGGGAGAAAGGGCTTGACTTAAACCTGTGATAAGATGTCTGCAATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAACAAATAACTGCACAATCTCCTCAAGCAATTGTGGGCCAACTTTTAAAGCTCTCAGTACACTCTaGGACAGCAAGGTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLTNNCTISSSNCGPTFKALSTL*DSKVFL Trigger: CAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGC...TTTAAAAGTTGGCCCACAATTGCTTGAGGAGATTGTGCAGTTATTTGTTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166176.9 ENSMUST00000184245.8 |
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| 3UTR-3UTR GCA 90 bp | GCACAATCTCCTCAAGCAATTGTGGGCCAACTTTTAAACATACATCATTTTAACCATCCCACACACTCATaGACTTGGCTATTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: AQSPQAIVGQLLNIHHFNHPTHS*TWLFSV Trigger: AACGGAGAATAGCCAAGTGCATGAGTGTGTGGGATG...GTTAAAATGATGTATGTTTAAAAGTTGGCCCACAATTGCTTGAGGAGATTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166176.9 ENSMUST00000184245.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTAGTCACAGAAGGCTaGGTCTATTGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: SPFVLAMRLSNFRLSAPHLVTEG*VYCRHL Trigger: AAGATGTCTGCAATAGACTCAGCCTTCTGTGACTAA...GTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCTTGCCTTCAAAGTTATTTCTTGTAGTCCCTACAAAGAGAGACACTGCATTAGTCACAGAAGGCTaGGTCTATTGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: TFLPSKLFLVVPTKRDTALVTEG*VYCRHL Trigger: AAGATGTCTGCAATAGACTCAGCCTTCTGTGACTAA...TGCAGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTTTGAAGGCAAGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184781.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTCATCCCACACACTCATaGACTTGGCTATTCTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: ALGYSPFVLAMRLSNFRLHPTHS*TWLFSV Trigger: AACGGAGAATAGCCAAGTGCATGAGTGTGTGGGATG...AAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTGACTAGTCACCAGCTGTCCATATGGGCACCTTaGCTTTTAAAGAATCAATGG | + |
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Preference number: 2 (lower is better) Translates to: MRLSNFRLSAPHLTSHQLSIWAP*LLKNQW Trigger: CCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA...CAGCTGGTGACTAGTCAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| 3UTR CAA 90 bp | TCTGCCATCGGTACATACGCTTCATATTCTAAGCTAATGACTTTCTaGCCTTCAAAGTTATTTCTTGTAGTCCCTACAAAGAGAGACACT | + |
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Preference number: 2 (lower is better) Translates to: SAIGTYASYSKLMTF*PSKLFLVVPTKRDT Trigger: AGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTTTGAAGGCAAGAAAGTCATTAGCTTAGAATATGAAGCGTATGTACCGATGGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184781.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGATTAGTCACAGAAGGCTaGGTCTATTGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: HALGYSPFVLAMRLSNFRLVTEG*VYCRHL Trigger: AAGATGTCTGCAATAGACTCAGCCTTCTGTGACTAA...TCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166104.9 ENSMUST00000166176.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184672.8 ENSMUST00000184781.8 |
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| 3UTR CAA 90 bp | CTCTGTTGGATGATCCAACTAATTACAACACACAGTAGTCTAGAATaGCTTGCCCAATTAAATTTAATCAGATGCTGGTTCACATCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LCWMIQLITTHSSLE*LAQLNLIRCWFTSV Trigger: TACAGATGTGAACCAGCATCTGATTAAATTTAATTGGGCAAGCAATTCTAGACTACTGTGTGTTGTAATTAGTTGGATCATCCAACAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | AGCCTGCCCACACCAGCCTCAGCAAAGCAGCAAGCCTaGAGCAGAATGGGAGCTGGGAGGAAGGCTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLPTPASAKQQA*SRMGAGRKATL Trigger: CAGAGTAGCCTTCCTCCCAGCTCCCATTCTGCTCCAGGCTTGCTGCTTTGCTGAGGCTGGTGTGGGCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | GGAGCAGAATGGGAGCTGGGAGGAAGGCTACTCTGTTaGATCGCAGAGGTAACTCTGGGACCTGGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GAEWELGGRLLC*IAEVTLGPGVP Trigger: TGGGACCCCAGGTCCCAGAGTTACCTCTGCGATCCAACAGAGTAGCCTTCCTCCCAGCTCCCATTCTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | CGGCTTCGAGGGACGCGGCTCTGTGAGCCAAGCCGATaGAATACTGCTATGTGTCTCACGGGCCATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLRGTRLCEPSR*NTAMCLTGHFC Trigger: ACAGAAATGGCCCGTGAGACACATAGCAGTATTCCATCGGCTTGGCTCACAGAGCCGCGTCCCTCGAAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183407.2 |
||
| 3UTR GCA 72 bp | CTTCCAGCACGTCTCAGGTCACATCCTACATCTGCGTaGCAGAGACTTAAAAGCACAGGCTGGGTCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LPARLRSHPTSA*QRLKSTGWVPH Trigger: GTGTGGGACCCAGCCTGTGCTTTTAAGTCTCTGGCACGCAGATGTAGGATGTGACCTGAGACGTGCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | GCTACTCTGTTGGATCGCAGAGGTAACTCTGGGACCTaGGGTCCCAGTACCTGTGAGAAGCTCTCACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ATLLDRRGNSGT*GPSTCEKLSLG Trigger: TCCTAGTGAGAGCTTCTCACAGGTACTGGGACCCCAGGTCCCAGAGTTACCTCTGCGATCCAACAGAGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | CAGACTAGTGTGATCTGCCAAGTGAGTGCTGGGAATTaGACCTGGGTCCTCTGGAAGAGCAGCCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTSVICQVSAGN*TWVLWKSSQCS Trigger: AGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCAGCACTCACTTGGCAGATCACACTAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166176.9 ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | GAGGAAGATCAGGAAGGTTCTAGACTGAGAGAAGGCTaGGGCAGACAGATGGCCATCGATCACTACGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EEDQEGSRLREG*GRQMAIDHYGR Trigger: CCTCCCGTAGTGATCGATGGCCATCTGTCTGCCTCAGCCTTCTCTCAGTCTAGAACCTTCCTGATCTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | AGCAAGGCTCGGAGGAAGATCAGGAAGGTTCTAGACTaGGAGAAGGCTGAGGCAGACAGATGGCCATCGATC | + |
|
Preference number: 3 (lower is better) Translates to: SKARRKIRKVLD*EKAEADRWPSI Trigger: GATCGATGGCCATCTGTCTGCCTCAGCCTTCTCTCAGTCTAGAACCTTCCTGATCTTCCTCCGAGCCTTGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | TTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATaGCGTAGCTCACGGCTTCGAGGGACGCGGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FSIWAPWLLKNQ*RSSRLRGTRLC Trigger: ACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| 3UTR CCA 72 bp | TGGAGCATACACATGAGCATACACATGAGCTCACGATaGTCGTGTTTCCTGCGGGAAGTCTCCTCAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: WSIHMSIHMSSR*SCFLREVSSEP Trigger: TGGTTCTGAGGAGACTTCCCGCAGGAAACACGACCATCGTGAGCTCATGTGTATGCTCATGTGTATGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAGCCCAGAAGCACTCTTaGTTTCTTTTCCAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: DALSTLWDSKVFLRQLKVAQKHS*FLFQDE Trigger: CTCATCTTGGAAAAGAAACAAAGAGTGCTTCTGGGC...TACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| 3UTR CCA 72 bp | GTAAGGAATAGTGGATCATCTGTTGGATTCCAGTGCTaGGCCCTGCAAACTTTCAACGAGGTTCTATTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VRNSGSSVGFQC*ALQTFNEVLFR Trigger: CCGGAATAGAACCTCGTTGAAAGTTTGCAGGGCCCAGCACTGGAATCCAACAGATGATCCACTATTCCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | ACAAGAGCCTGTCCATTCTCTACCACTCAAGGCATCTaGAGCATACACATGAGCATACACATGAGCTCACGA | + |
|
Preference number: 3 (lower is better) Translates to: TRACPFSTTQGI*SIHMSIHMSSR Trigger: TCGTGAGCTCATGTGTATGCTCATGTGTATGCTCCAGATGCCTTGAGTGGTAGAGAATGGACAGGCTCTTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGGCCCAGAAGCACTCTTaGTTTCTTTTCCAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQYTLGQQGLPETAEGKRAQKHS*FLFQDE Trigger: CTCATCTTGGAAAAGAAACAAAGAGTGCTTCTGGGC...CCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGCGCACCACACTTGACTAGTCACCAGCTGCCCAGAAGCACTCTTTGTTTCTTCCATATGGGCACCTaGGCTTTTAAAGAATCAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSAPHLTSHQLPRSTLCFFHMGT*AFKESM Trigger: CATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAA...GAAACAAAGAGTGCTTCTGGGCAGCTGGTGACTAGTCAAGTGTGGTGCGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| 3UTR GCA 72 bp | ACGGTAAGGAATAGTGGATCATCTGTTGGATTCCAGTaGTGGGCCCTGCAAACTTTCAACGAGGTTCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: TVRNSGSSVGFQ*WALQTFNEVLF Trigger: GAATAGAACCTCGTTGAAAGTTTGCAGGGCCCAGCACTGGAATCCAACAGATGATCCACTATTCCTTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | TTAGAATGTACCTTCAGTCTTCCCAGTGAACCTGTCTaGGGTGATGGACATGTTAATCGTCTGGGTTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LECTFSLPSEPV*GDGHVNRLGCD Trigger: GTCACAACCCAGACGATTAACATGTCCATCACCTCAGACAGGTTCACTGGGAAGACTGAAGGTACATTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166176.9 ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | TCGGCAGTGAACTGTATTATGTCTTTAGGTTTCTCCTaGACATCGTCCACATCTTTCCCAGATGGCTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SAVNCIMSLGFS*TSSTSFPDGSD Trigger: ATCTGAGCCATCTGGGAAAGATGTGGACGATGTCCAGGAGAAACCTAAAGACATAATACAGTTCACTGCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | TTTAAAACTATTCCTCTACCTGCTTTAAGAGCAAACTaGCAACTACTGCGTGTCAGGATGACGTCAGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FKTIPLPALRAN*QLLRVRMTSAP Trigger: AGGGGCTGACGTCATCCTGACACGCAGTAGTTGCCAGTTTGCTCTTAAAGCAGGTAGAGGAATAGTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | GCATTCACACTCAAACTGTCAAAACCAGGACCCAAATaGCGGCTCTGTAACCACTTCTCTCAAAACATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFTLKLSKPGPK*RLCNHFSQNIL Trigger: CAGAATGTTTTGAGAGAAGTGGTTACAGAGCCGTCATTTGGGTCCTGGTTTTGACAGTTTGAGTGTGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | AGGTTTAAGTCAAGCCCTTTTTCCATATGGGCACCTTaGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RFKSSPFSIWAP*LLKNQWRSSRL Trigger: AAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGGCTTGACTTAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165022.9 |
||
| 3UTR TCA 72 bp | AATGACGGCTCTGTAACCACTTCTCTCAAAACATTCTaGAGCCATATTGTGACCTTGCATGACCTTACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NDGSVTTSLKTF*SHIVTLHDLTQ Trigger: TTGAGTAAGGTCATGCAAGGTCACAATATGGCTTCAGAATGTTTTGAGAGAAGTGGTTACAGAGCCGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | AGTCACAATTATAGCCCTGCATCTACTGCCCTCTGTTaGATGATCCAACTAATTACAACACACAGTAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SHNYSPASTALC*MIQLITTHSSL Trigger: TAGACTACTGTGTGTTGTAATTAGTTGGATCATCCAACAGAGGGCAGTAGATGCAGGGCTATAATTGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCACGACACCACATTATAGAACCTAAGTGTATTTCACTTGTCAAATATATGGCCCAGAAGCACTCTTaGTTTCTTTTCCAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASRHHIIEPKCISLVKYMAQKHS*FLFQDE Trigger: CTCATCTTGGAAAAGAAACAAAGAGTGCTTCTGGGC...CATATATTTGACAAGTGAAATACACTTAGGTTCTATAATGTGGTGTCGTGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR GCA 72 bp | AGTCTAGAATTGCTTGCCCAATTAAATTTAATCAGATaGTGGTTCACATCTGTATGTGGTACCACTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SLELLAQLNLIR*WFTSVCGTTSM Trigger: CATGGAAGTGGTACCACATACAGATGTGAACCAGCATCTGATTAAATTTAATTGGGCAAGCAATTCTAGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR CCA 72 bp | CTAGAATTGCTTGCCCAATTAAATTTAATCAGATGCTaGTTCACATCTGTATGTGGTACCACTTCCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LELLAQLNLIRC*FTSVCGTTSMS Trigger: TGACATGGAAGTGGTACCACATACAGATGTGAACCAGCATCTGATTAAATTTAATTGGGCAAGCAATTCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| 3UTR TCA 72 bp | TCTCAAAACATTCTGAAGCCATATTGTGACCTTGCATaGCCTTACTCAAAGGATAAAAATCTAGAGGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQNILKPYCDLA*PYSKDKNLEAL Trigger: TAGAGCCTCTAGATTTTTATCCTTTGAGTAAGGTCATGCAAGGTCACAATATGGCTTCAGAATGTTTTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGACAGCTGAAGGTAAAAGGAAGGCTGCAGCGCACTGCGAGCTGGTTAGTGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PETAEGKRKAAAHCELVSGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...ACTAACCAGCTCGCAGTGCGCTGCAGCCTTCCTTTTACCTTCAGCTGTCTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACCCTGTGGCACAGAAATaGTCTCCGAGCGAACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVPTKRDTAPHRGDTTNPVAQK*SPSELR Trigger: CCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGG...GTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCCCTGTGGCACAGAAATaGTCTCCGAGCGAACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLVVPTKRDTAPHRGDTTPVAQK*SPSELR Trigger: CCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGG...GGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTACAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| 3UTR CAA 72 bp | TTCAGGTGTAGAGGAAGTGACTCTACCCCGAAGCCCTaGATCCCCCACATAAAGAGCAAGGCTCGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRCRGSDSTPKP*IPHIKSKARRK Trigger: CTTCCTCCGAGCCTTGCTCTTTATGTGGGGGATCAAGGGCTTCGGGGTAGAGTCACTTCCTCTACACCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYTLGQQGLPETAEGKRGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...CCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | AGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGGCCTGTGGCACAGAAATaGTCTCCGAGCGAACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STLWDSKVFLRQLKVKGRPVAQK*SPSELR Trigger: CCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGG...CCTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAGGGACGCGGCTCCGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PWLLKNQWRSSRLRGTRLRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...GAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTGGGAATTGAACCTGGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACTACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ECWELNLGPLEEQPVLLTTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...AGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCAGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVVPTKRDTAPHRGDTTNTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...GTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | ACCAACTGTGACACTTCCCCCACAGAGAGCTTCTCGGCAGTGAACTGTATTATGCTCCTTCCACAGCTCTaGCGCTTTGATTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNCDTSPTESFSAVNCIMLLPQL*RFDFLW Trigger: CCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAG...CATAATACAGTTCACTGCCGAGAAGCTCTCTGTGGGGGAAGTGTCACAGTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTTAGGTTTCTCCTGGACATCGTCCACATCTTTCCCAGATGGCTCAGATGCCTCCTTCCACAGCTCTaGCGCTTTGATTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRFLLDIVHIFPRWLRCLLPQL*RFDFLW Trigger: CCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAG...GCATCTGAGCCATCTGGGAAAGATGTGGACGATGTCCAGGAGAAACCTAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACTGTGACACTTCCCGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKRDTAPHRGDTTNCDTSRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...GGAAGTGTCACAGTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLVVPTKRDTAPHRGDTTTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...GGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTACAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACTGTAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVPTKRDTAPHRGDTTNCSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...ACAGTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAGGGACGCGGCTCTGTAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: WLLKNQWRSSRLRGTRLCSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...ACAGAGCCGCGTCCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACTGTGACACTTCCAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TKRDTAPHRGDTTNCDTSSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...GGAAGTGTCACAGTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTGGGAATTGAACCTGGGTCCTCTGGAAGAGCAGCCAGTGCTCTTAACTAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: ECWELNLGPLEEQPVLLTSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...AGTTAAGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCAGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYTLGQQGLPETAEGKRKTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...CTTCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | GGAACCAAACCAAGCCGATGGAATACTGCTATGTGTCTCACGGGCCATTTCTGTACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTKPSRWNTAMCLTGHFCTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...ACAGAAATGGCCCGTGAGACACATAGCAGTATTCCATCGGCTTGGTTTGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAGGTTTCTCCTGGACCTCCTTCCACAGCTCTaGCGCTTTGATTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRELLGSELYYVFRFLLDLLPQL*RFDFLW Trigger: CCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAG...GTCCAGGAGAAACCTAAAGACATAATACAGTTCACTGCCGAGAAGCTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTATTGCAGACATCTTATCACAGGTTTAAGTCAAGCCCTTTCTCCCCATCTCCTGTGGCACAGAAATaGTCTCCGAGCGAACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQTSYHRFKSSPFSPSPVAQK*SPSELR Trigger: CCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGG...AGATGGGGAGAAAGGGCTTGACTTAAACCTGTGATAAGATGTCTGCAATAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGAAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSTLWDSKVFLRQLKVKGSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...TCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGCACATCTTTCCCAGATaGCTCAGATGCATTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQYTLGQQGLPETAEGKRHIFPR*LRCIIL Trigger: GAGGATAATGCATCTGAGCCATCTGGGAAAGATGTG...CCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGACACATCTTTCCCAGATaGCTCAGATGCATTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTLWDSKVFLRQLKVKGHIFPR*LRCIIL Trigger: GAGGATAATGCATCTGAGCCATCTGGGAAAGATGTG...TCCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | GACACTTCCCCCACAGAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAGGTCGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DTSPTESFSAVNCIMSLGRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...ACCTAAAGACATAATACAGTTCACTGCCGAGAAGCTCTCTGTGGGGGAAGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | TCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGACGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SIWAPWLLKNQWRSSRLRRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...TCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVPTKRDTAPHRGDTTNTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...GTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | GTAGTCCCTACAAAGAGAGACACTGCACCACACAGAGGGGACACCACCAACTGTACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPTKRDTAPHRGDTTNCTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...ACAGTTGGTGGTGTCCCCTCTGTGTGGTGCAGTGTCTCTCTTTGTAGGGACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAAGGCTGAGTCTATTGCAGACATCTTATCACAGGTTTAAGTCAAGCCCTAACTGTGCTTGCTTCTaGCACTGGAACCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRRLSLLQTSYHRFKSSPNCACF*HWNQSF Trigger: GAAGCTTTGGTTCCAGTGTCAGAAGCAAGCACAGTT...AGGGCTTGACTTAAACCTGTGATAAGATGTCTGCAATAGACTCAGCCTTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164737.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGAAGGTAAAAGGTCCATATGGGCACCTTaGCTTTTAAAGAATCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYTLGQQGLPETAEGKRSIWAP*LLKNQW Trigger: CCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA...CCTTTTACCTTCAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTGACTAGTCCTGTGGCACAGAAATaGTCTCCGAGCGAACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLAMRLSNFRLSAPHLTSPVAQK*SPSELR Trigger: CCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGG...ACTAGTCAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAGGGACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWAPWLLKNQWRSSRLRGTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...CCCTCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCAGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSPFVLAMRLSNFRLSAPGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...TGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGGACACCACCAACTGTaGCACTTCCCCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYSPFVLAMRLSNFRLSGHHQL*HFPHRE Trigger: CTCTCTGTGGGGGAAGTGTCACAGTTGGTGGTGTCC...GCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTTGCCTTCAAAGTTATTTCTTGTAGTCCCTACAAAGAGAGACACTGCACTCCTTCCACAGCTCTaGCGCTTTGATTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLPSKLFLVVPTKRDTALLPQL*RFDFLW Trigger: CCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAG...TGCAGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTTTGAAGGCAAGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | GACACTTCCCCCACAGAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAGGTACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTSPTESFSAVNCIMSLGTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...ACCTAAAGACATAATACAGTTCACTGCCGAGAAGCTCTCTGTGGGGGAAGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGCAGACATCTTATCACAGGTTTAAGTCAAGCCCTTTCTCCCCATCTTTAACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQTSYHRFKSSPFSPSLTALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...TAAAGATGGGGAGAAAGGGCTTGACTTAAACCTGTGATAAGATGTCTGCAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| CDS-3UTR CCA 90 bp | TGTGACACTTCCCCCACAGAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CDTSPTESFSAVNCIMSLTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...TAAAGACATAATACAGTTCACTGCCGAGAAGCTCTCTGTGGGGGAAGTGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| 3UTR CAA 72 bp | ATGAGATTATCAAATTTTAGACTTAGCGCACCACACTaGACTAGTCACCAGCTGCCCAGAAGCACTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRLSNFRLSAPH*TSHQLPRSTLC Trigger: ACAAAGAGTGCTTCTGGGCAGCTGGTGACTAGTCAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184046.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS-3UTR TCA 90 bp | CTTCATATATTTCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCTCCTTCCACAGCTCTaGCGCTTTGATTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHIFPFSIWAPWLLKNQWLLPQL*RFDFLW Trigger: CCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAG...CCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGAAATATATGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | CTATTGCAGACATCTTATCACAGGTTTAAGTCAAGCCCTTTCTCCCCATCTTTACACATCTTTCCCAGATaGCTCAGATGCATTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTSYHRFKSSPFSPSLHIFPR*LRCIIL Trigger: GAGGATAATGCATCTGAGCCATCTGGGAAAGATGTG...TAAAGATGGGGAGAAAGGGCTTGACTTAAACCTGTGATAAGATGTCTGCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS-3UTR TCA 90 bp | TCATATATTTCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYISFFHMGTLAFKESMATALTL*FPVAQK Trigger: TTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGT...CGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGAAATATATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTGACTAGTCACCGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LAMRLSNFRLSAPHLTSHRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...GTGACTAGTCAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAGCATCACGACACCACATTATAGAACCTAAGTGTATTTCACTTGTCAAACGCTTTGATTTCCTGTaGCACAGAAATGGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQASRHHIIEPKCISLVKRFDFL*HRNGLR Trigger: TCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCG...TTTGACAAGTGAAATACACTTAGGTTCTATAATGTGGTGTCGTGATGCTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184245.8 |
||
| CDS-3UTR CCA 90 bp | CATGCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTGTAGTCCCCAGATaGCTCAGATGCATTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HALGYSPFVLAMRLSNFRLVVPR*LRCIIL Trigger: GAGGATAATGCATCTGAGCCATCTGGGGACTACAAG...TCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184046.8 |
||
| CDS-3UTR TCA 90 bp | CATGCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGAAGCTCGACATACTCTTaGCGAACAGCAAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: HALGYSPFVLAMRLSNFRSSTYS*RTANIT Trigger: GGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCT...TCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCCACATCTTTCCCAGATaGCTCAGATGCATTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGYSPFVLAMRLSNFRLSHIFPR*LRCIIL Trigger: GAGGATAATGCATCTGAGCCATCTGGGAAAGATGTG...GCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CCA 90 bp | CCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTGACAGCAAATATCACCTaGTTTCTAACATCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFVLAMRLSNFRLSAPHLTANIT*FLTSAN Trigger: GTTGGCTGATGTTAGAAACCAGGTGATATTTGCTGT...CAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS TCA 90 bp | ACCCAGGATGGAGACTCTCTAGCTCCTTCCACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAATGGTCTCCGAGCGAACTCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TQDGDSLAPSTALTL*FPVAQKWSPSELRL Trigger: TAGCCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAGCTAGAGAGTCTCCATCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS CCA 90 bp | TCCACATCTTTCCCAGATGGCTCAGATGCATTATCCTCCACTGATTaGCGGGATGATGGCAACCTCATCTCCGGGCTGAAGCAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSFPDGSDALSSTD*RDDGNLISGLKQEL Trigger: CAACTCCTGCTTCAGCCCGGAGATGAGGTTGCCATCATCCCGCCAATCAGTGGAGGATAATGCATCTGAGCCATCTGGGAAAGATGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000164871.3 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS CCA 90 bp | GAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAGGTTTCTCCTaGACATCGTCCACATCTTTCCCAGATGGCTCAGATGCATTATCC | + |
|
Preference number: 5 (lower is better) Translates to: ESFSAVNCIMSLGFS*TSSTSFPDGSDALS Trigger: GGATAATGCATCTGAGCCATCTGGGAAAGATGTGGACGATGTCCAGGAGAAACCTAAAGACATAATACAGTTCACTGCCGAGAAGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000164871.3 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CAA 90 bp | GATAGTGATGCTCTCAGTACACTCTGGGACAGCAAGGTCTTCCTGAGACAGCTGTTCCATATGGGCACCTaGGCTTTTAAAGAATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: DSDALSTLWDSKVFLRQLFHMGT*AFKESM Trigger: CATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAA...CAGCTGTCTCAGGAAGACCTTGCTGTCCCAGAGTGTACTGAGAGCATCACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015680.11 ENSMUST00000166176.9 ENSMUST00000184672.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTTAGCGCACCACACTTGACTAGTCACCAGCTGCCCAGAAGCACTCTTAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: FRLSAPHLTSHQLPRSTLKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...AAGAGTGCTTCTGGGCAGCTGGTGACTAGTCAAGTGTGGTGCGCTAAGTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CAA 90 bp | TCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGTAGCTCACGGCTTCGAAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SIWAPWLLKNQWRSSRLRKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...TCGAAGCCGTGAGCTACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
||
| CDS-3UTR CAA 90 bp | TATGTCTTTAGGTTTCTCCTGGACATCGTCCACATCTTTCCCAGATGGCTCAGAAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: YVFRFLLDIVHIFPRWLRKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...TCTGAGCCATCTGGGAAAGATGTGGACGATGTCCAGGAGAAACCTAAAGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 |
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| CDS-3UTR CAA 90 bp | CACAGAGAGCTTCTCGGCAGTGAACTGTATTATGTCTTTAGGTTTCTCCTGGACAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
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Preference number: 5 (lower is better) Translates to: HRELLGSELYYVFRFLLDKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...GTCCAGGAGAAACCTAAAGACATAATACAGTTCACTGCCGAGAAGCTCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184781.8 |
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| CDS-3UTR CAA 90 bp | GAACTGTATTATGTCTTTAGGTTTCTCCTGGACATCGTCCACATCTTTCCCAGAAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
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Preference number: 5 (lower is better) Translates to: ELYYVFRFLLDIVHIFPRKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...TCTGGGAAAGATGTGGACGATGTCCAGGAGAAACCTAAAGACATAATACAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 |
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| CDS-3UTR CAA 90 bp | CCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCACACTTGTTCCATATGGGCACCTaGGCTTTTAAAGAATCAATG | + |
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Preference number: 5 (lower is better) Translates to: PFVLAMRLSNFRLSAPHLFHMGT*AFKESM Trigger: CATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAA...CAAGTGTGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS-3UTR CAA 90 bp | GCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTGCCCAGAAGCACTCTTaGTTTCTTTTCCAAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: ALGYSPFVLAMRLSNFRLAQKHS*FLFQDE Trigger: CTCATCTTGGAAAAGAAACAAAGAGTGCTTCTGGGC...AAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS-3UTR CAA 90 bp | CATATATTTCCTTTTTCCATATGGGCACCTTGGCTTTTAAAGAATCAATGGCGTAAGCTCGACATACTCTaGACGAACAGCAAATATCAC | + |
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Preference number: 5 (lower is better) Translates to: HIFPFSIWAPWLLKNQWRKLDIL*TNSKYH Trigger: GTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTT...ACGCCATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAAAAAGGAAATATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS-3UTR CAA 90 bp | TATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGACTTAGCGCACCATTCCATATGGGCACCTaGGCTTTTAAAGAATCAATG | + |
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Preference number: 5 (lower is better) Translates to: YSPFVLAMRLSNFRLSAPFHMGT*AFKESM Trigger: CATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAA...TGGTGCGCTAAGTCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS-3UTR CAA 90 bp | CATGCACTTGGCTATTCTCCGTTTGTGTTAGCTATGAGATTATCAAATTTTAGATTCCATATGGGCACCTaGGCTTTTAAAGAATCAATG | + |
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Preference number: 5 (lower is better) Translates to: HALGYSPFVLAMRLSNFRFHMGT*AFKESM Trigger: CATTGATTCTTTAAAAGCCAAGGTGCCCATATGGAA...TCTAAAATTTGATAATCTCATAGCTAACACAAACGGAGAATAGCCAAGTGCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS CCA 72 bp | TCCCCAGATGGCTCAGATGCATTATCCTCCACTGATTaGCGGGATGATGGCAACCTCATCTCCGGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPDGSDALSSTD*RDDGNLISGLK Trigger: CTTCAGCCCGGAGATGAGGTTGCCATCATCCCGCCAATCAGTGGAGGATAATGCATCTGAGCCATCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184046.8 |
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| CDS CAA 90 bp | AACCCAGGATGGAGACTCTCTAGCTCCTTCCACAGCTCTGACGCTTaGATTTCCTGTGGCACAGAAATGGTCTCCGAGCGAACTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: NPGWRLSSSFHSSDA*ISCGTEMVSERTPA Trigger: AGCCGGAGTTCGCTCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAGCTAGAGAGTCTCCATCCTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS CCA 72 bp | TTCCCAGATGGCTCAGATGCATTATCCTCCACTGATTaGCGGGATGATGGCAACCTCATCTCCGGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPDGSDALSSTD*RDDGNLISGLK Trigger: CTTCAGCCCGGAGATGAGGTTGCCATCATCCCGCCAATCAGTGGAGGATAATGCATCTGAGCCATCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015680.11 ENSMUST00000164737.8 ENSMUST00000164871.3 ENSMUST00000166176.9 ENSMUST00000184672.8 |
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| CDS TCA 72 bp | GGAGACTCTCTAGCTCCTTCCACAGCTCTGACGCTTTaGTTTCCTGTGGCACAGAAATGGTCTCCGAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GDSLAPSTALTL*FPVAQKWSPSE Trigger: TTCGCTCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAGCTAGAGAGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS CAA 72 bp | TGGAGACTCTCTAGCTCCTTCCACAGCTCTGACGCTTaGATTTCCTGTGGCACAGAAATGGTCTCCGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: WRLSSSFHSSDA*ISCGTEMVSER Trigger: TCGCTCGGAGACCATTTCTGTGCCACAGGAAATCAAAGCGTCAGAGCTGTGGAAGGAGCTAGAGAGTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS CAA 90 bp | GATTGGCGGGATGATGGCAACCTCATCTCCGGGCTGAAGCAGGAGTaGCTGATCTCCAAGCTCGACATACTCTTGACGAACAGCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: DWRDDGNLISGLKQE*LISKLDILLTNSKY Trigger: ATATTTGCTGTTCGTCAAGAGTATGTCGAGCTTGGAGATCAGCAACTCCTGCTTCAGCCCGGAGATGAGGTTGCCATCATCCCGCCAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS GCA 72 bp | GGTCTCCGAGCGAACTCCGGCTATTTCAGCACTTTTTaGAAAATACAACACGTCAATCTGGCACCTAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GLRANSGYFSTF*KIQHVNLAPRN Trigger: GTTCCTAGGTGCCAGATTGACGTGTTGTATTTTGCAAAAAGTGCTGAAATAGCCGGAGTTCGCTCGGAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS CAA 72 bp | AAGCAGGAGTTGCTGATCTCCAAGCTCGACATACTCTaGACGAACAGCAAATATCACCTGGTTTCTAACATC | + |
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Preference number: 6 (lower is better) Translates to: KQELLISKLDIL*TNSKYHLVSNI Trigger: GATGTTAGAAACCAGGTGATATTTGCTGTTCGTCAAGAGTATGTCGAGCTTGGAGATCAGCAACTCCTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000165022.9 ENSMUST00000166104.9 ENSMUST00000183407.2 ENSMUST00000184214.8 ENSMUST00000184245.8 ENSMUST00000184335.8 ENSMUST00000184781.8 |
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| CDS CAA 90 bp | TCTGACACTGGAACCAAAGCTTCATATTCTAAGCTAATGACTTTCTaGCCTTCAAAGTTATTTCTTGTAGTCCCTACAAAGAGAGACACT | + |
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Preference number: 6 (lower is better) Translates to: SDTGTKASYSKLMTF*PSKLFLVVPTKRDT Trigger: AGTGTCTCTCTTTGTAGGGACTACAAGAAATAACTTTGAAGGCAAGAAAGTCATTAGCTTAGAATATGAAGCTTTGGTTCCAGTGTCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164737.8 |
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