Pregenerated sensors for MOCS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064120Ensembl transcript IDs: ENSMUST00000024797.16, ENSMUST00000165390.9, ENSMUST00000173033.8, ENSMUST00000173362.8, ENSMUST00000173430.2, ENSMUST00000174647.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAGCCATGGCAGCCGAGGTCAGCGCCTCCATCTCTACCCCGGTaGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GQPWQPRSAPPSLPR*DPGPGRMPGSTQRG Trigger: GCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACCGGGGTAGAGATGGAGGCGCTGACCTCGGCTGCCATGGCTGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR CCA 90 bp | GAGGGGAGCCAGACCCTAGGCACTGTTGAGACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCCACAAAGATGCCATCTGGTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: EGSQTLGTVETEEGP*GCSVSSTKMPSGQR Trigger: TCTCTGACCAGATGGCATCTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGTCTGGCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR CCA 90 bp | CTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTaGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACG | + |
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Preference number: 1 (lower is better) Translates to: LPQRCHLVRETLSGT*IPNTEGIPGEIAPT Trigger: CGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTCTTGGGTATCCAGTATCAAAACTCCCATTaGCAGAGTCCTGGAAGGTGTCAAGGCCTCAGGTGTCCTCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVLGIQYQNSH*QSPGRCQGLRCPLV Trigger: CACCAGAGGACACCTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGGGAGTTTTGATACTGGATACCCAAGACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| 3UTR CCA 90 bp | AGTGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTaGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGC | + |
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Preference number: 1 (lower is better) Translates to: SVSSTKMPSGQRDTV*HLDSEHGGDPRRNC Trigger: GCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR GCA 90 bp | AGAAGCAACTTGGGGAGGAAAGGGTTTATTCAGCTTACAATTCCATaGTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RSNLGRKGFIQLTIP*CCSSPRKSGLELKQ Trigger: CTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGCATGGAATTGTAAGCTGAATAAACCCTTTCCTCCCCAAGTTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGCCATCTCTACCCCGGTaGGACCCCGGGCCCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VGPRARQDAWINTAWRVLPSLPR*DPGPGR Trigger: CCTGCCGGGCCCGGGGTCCCACCGGGGTAGAGATGG...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGGGGCATCAGGTGCCTaGGACCCTGTGCTAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GGTPGPAGCLDQHSVACAGASGA*DPVLRH Trigger: GTGCCTTAGCACAGGGTCCCAGGCACCTGATGCCCC...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGGTTCCCATCAGCTGTaGTGCGCAACCGGTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GGTPGPAGCLDQHSVACAGSHQL*CATGCR Trigger: CCTGCAACCGGTTGCGCATCACAGCTGATGGGAACC...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCCCCTTGGGAGACATaGCTGGAGAGTGTGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: VGPRARQDAWINTAWRVLSPWET*LESVAL Trigger: GAGTGCCACACTCTCCAGTCATGTCTCCCAAGGGGA...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
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| 3UTR-3UTR CCA 90 bp | GATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGGCCATCTCTACCCCGGTaGGACCCCGGGCCCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DSEHGGDPRRNCSNELVGPSLPR*DPGPGR Trigger: CCTGCCGGGCCCGGGGTCCCACCGGGGTAGAGATGG...CCCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTGACCCTAGGCACTGTTaGGACAGAGGAAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: WDPGPGRMPGSTQRGVCCDPRHC*DRGRAL Trigger: CAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGTC...ACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCAGGTGGTCCCGCAGTaGCACCTCAGAGTTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: WDPGPGRMPGSTQRGVCCQVVPQ*HLRVPK Trigger: TTTGGGAACTCTGAGGTGTCACTGCGGGACCACCTG...ACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TACCCCGGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGGCTCCAACGAGCTGGTaGGGAATCCTGAAGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: YPGGTPGPAGCLDQHSVAAPTSW*GILKHQ Trigger: TTGATGCTTCAGGATTCCCCACCAGCTCGTTGGAGC...CGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACCGGGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGGGGGATCAACTGACTaGTTAGCTTGGCTGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGTPGPAGCLDQHSVACAGGSTD*LAWLPG Trigger: TCCAGGCAGCCAAGCTAACCAGTCAGTTGATCCCCC...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGGCTCCAACGAGCTGGTaGGGAATCCTGAAGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: VGPRARQDAWINTAWRVLAPTSW*GILKHQ Trigger: TTGATGCTTCAGGATTCCCCACCAGCTCGTTGGAGC...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCCAGAGAGACACTGTCTaGCACTTGGATTCCGAACAC | + |
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Preference number: 2 (lower is better) Translates to: RWDPGPGRMPGSTQRGVCQRDTV*HLDSEH Trigger: GTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTG...GCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: WDPGPGRMPGSTQRGVCCTEEGP*GCSVSS Trigger: GGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGT...ACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCGTCCAAGAAGAACCATaGCAGAGGCCACAGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: SGSFSSPGHRCRMVSSISVQEEP*QRPQPP Trigger: GGGTGGCTGTGGCCTCTGCCATGGTTCTTCTTGGAC...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGGGAGACATGACTGGAGAGTGTGGCACTCTAAGCCCGATGGAAGTCTCCCCGTCAGGGCAGCCATaGCAGCCGAGGTCAGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: PLGDMTGECGTLSPMEVSPSGQP*QPRSAP Trigger: AGGCGCTGACCTCGGCTGCCATGGCTGCCCTGACGG...GGAGACTTCCATCGGGCTTAGAGTGCCACACTCTCCAGTCATGTCTCCCAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
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| 3UTR-3UTR TCA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCGCTGGTGGGGAATCCTaGAGCATCAAAAGTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SGSFSSPGHRCRMVSSISAGGES*SIKSTL Trigger: CAGGGTACTTTTGATGCTTCAGGATTCCCCACCAGC...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCTCAGAGAGACACTGTCTaGCACTTGGATTCCGAACAC | + |
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Preference number: 2 (lower is better) Translates to: GPRARQDAWINTAWRVLSQRDTV*HLDSEH Trigger: GTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTG...AGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTTCTCTTCCACAAAGATaGCATCTGGTCAGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GGTPGPAGCLDQHSVACASLPQR*HLVRET Trigger: TGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR GCA 90 bp | GGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCTAATATTGAACATGCCTaGGTGCTGCCGCTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GPRARQDAWINTAWRVLSNIEHA*VLPLLP Trigger: AGGAAGAAGCGGCAGCACGCAGGCATGTTCAATATT...AGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCATTGCTCCAACGAGCTaGTGGGGAATCCTGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SGSFSSPGHRCRMVSSISIAPTS*WGILKH Trigger: ATGCTTCAGGATTCCCCACCAGCTCGTTGGAGCAAT...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTCTTGTTGCCGTCAAATaGCATGTACTCAATGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: GGTPGPAGCLDQHSVACALVAVK*HVLNEA Trigger: CGCTTCATTGAGTACATGCCATTTGACGGCAACAAG...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCTGTAACCCAGCTCGATaGCTTTGTGGATACCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SGSFSSPGHRCRMVSSISCNPAR*LCGYPP Trigger: TGGAGGGTATCCACAAAGCCATCGAGCTGGGTTACA...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | GATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGGGACCCTAGGCACTGTTaGGACAGAGGAAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: DSEHGGDPRRNCSNELVGDPRHC*DRGRAL Trigger: CAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGTC...CCCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGGAAGGCCCTCTGTCAGGGCCACGAAGTCCAGCAGCTCGTCTTCATTCGCCACCGCTGTCGGATaGTGTCCAGCATCTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SKGRPSVRATKSSSSSSFATAVG*CPASPC Trigger: ACAAGGAGATGCTGGACACCATCCGACAGCGGTGGC...GAATGAAGACGAGCTGCTGGACTTCGTGGCCCTGACAGAGGGCCTTCCCTTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGGCATCAGGTGCCTaGGACCCTGTGCTAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RCHLVRETLSGTWIPNTEGASGA*DPVLRH Trigger: GTGCCTTAGCACAGGGTCCCAGGCACCTGATGCCCC...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGGTTCCCATCAGCTGTaGTGCGCAACCGGTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ETLSGTWIPNTEGIPGEIGSHQL*CATGCR Trigger: CCTGCAACCGGTTGCGCATCACAGCTGATGGGAACC...AATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGTCCAAGAAGAACCATaGCAGAGGCCACAGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: RCHLVRETLSGTWIPNTEVQEEP*QRPQPP Trigger: GGGTGGCTGTGGCCTCTGCCATGGTTCTTCTTGGAC...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGCCACCGCTGTCGGATaGTGTCCAGCATCTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RCHLVRETLSGTWIPNTEATAVG*CPASPC Trigger: ACAAGGAGATGCTGGACACCATCCGACAGCGGTGGC...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGGAAGGCCCTCTGTCAGGGCCACGAAGTCCAGCAGCTCGTCTTCATTCTCAGGATCTCCTCTGTaGTCAGTAGGTCAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SKGRPSVRATKSSSSSSFSGSPL*SVGQLW Trigger: CCAAAGCTGACCTACTGACCACAGAGGAGATCCTGA...GAATGAAGACGAGCTGCTGGACTTCGTGGCCCTGACAGAGGGCCTTCCCTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCGAAGGGCCTTGGGGATaGAGTGTCTCTTCCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: IWSERHCLALGFRTRRGSEGPWG*SVSSTK Trigger: CTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTC...GGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCATCCTGTCGCTGGTGGGGAATCCTaGAGCATCAAAAGTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: GRCWHKTLGLWSTSVHPVAGGES*SIKSTL Trigger: CAGGGTACTTTTGATGCTTCAGGATTCCCCACCAGC...GACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
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| 3UTR-3UTR GCA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGAAGGGCCTTGGGGATaGAGTGTCTCTTCCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: RCHLVRETLSGTWIPNTEEGPWG*SVSSTK Trigger: CTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTC...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGTTCCTCAGCCTGAATTaGATCCCCTTGGGAGACATG | + |
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Preference number: 2 (lower is better) Translates to: PGVGRCWHKTLGLWSTSVFLSLN*IPLGDM Trigger: CATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAA...CACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| 3UTR CAA 90 bp | TCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTaGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SSTKMPSGQRDTVWH*DSEHGGDPRRNCSN Trigger: GTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTCTTGGGTATCCAGTATCAAAACTCCCATaGCCAGAGTCCTGGAAGGTGTCAAGGCCTCAGGTGTCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCLGYPVSKLP*PESWKVSRPQVSSG Trigger: ACCAGAGGACACCTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGGGAGTTTTGATACTGGATACCCAAGACACACACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGGAAGGGCCTTGGGGATaGAGTGTCTCTTCCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: VSLPQRCHLVRETLSGTWEGPWG*SVSSTK Trigger: CTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTC...CCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTGAACATGCCTGCGTaGTGCCGCTTCTTCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: CLFHKDAIWSERHCLALGLNMPA*CRFFLP Trigger: GGGTAGGAAGAAGCGGCAGCACGCAGGCATGTTCAA...TCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACATGACTGGAGAGTGTGGCACATTGCTCCAACGAGCTaGTGGGGAATCCTGAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: FPQPELHPLGRHDWRVWHIAPTS*WGILKH Trigger: ATGCTTCAGGATTCCCCACCAGCTCGTTGGAGCAAT...GTGCCACACTCTCCAGTCATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGGGGAATCCTGAAGCATCAAAAGTACCCTGATAGGTCACCCACCGATGAGATTGCTCCAACGAGCTaGTGGGGAATCCTGAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WWGILKHQKYPDRSPTDEIAPTS*WGILKH Trigger: ATGCTTCAGGATTCCCCACCAGCTCGTTGGAGCAAT...CTCATCGGTGGGTGACCTATCAGGGTACTTTTGATGCTTCAGGATTCCCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTAGTGAGCCCTTATTCTCTCCCCGGGGAAGAGAAGAGAGGACCCTAAATCAGAGAGACACTGTCTaGCACTTGGATTCCGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: LLSEPLFSPRGREERTLNQRDTV*HLDSEH Trigger: GTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTG...ATTTAGGGTCCTCTCTTCTCTTCCCCGGGGAGAGAATAAGGGCTCACTAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| 3UTR-3UTR GCA 90 bp | GAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTTCTCTTCCACAAAGATaGCATCTGGTCAGAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: ETLSGTWIPNTEGIPGEISLPQR*HLVRET Trigger: TGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA...AATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGATAAAGCTGTCTGTCTaGAACAACCTGAGCAATATG | + |
|
Preference number: 2 (lower is better) Translates to: PGVGRCWHKTLGLWSTSVIKLSV*NNLSNM Trigger: CATATTGCTCAGGTTGTTTCAGACAGACAGCTTTAT...CACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGATACATTCCTTAGGGAGTTTGTGCTTTTCCTTCCTCTAAGTGGGTTCCTCCCATTGCCAGAGTCCTaGAAGGTGTCAAGGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CDTFLREFVLFLPLSGFLPLPES*KVSRPQ Trigger: CTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGG...GAGGAACCCACTTAGAGGAAGGAAAAGCACAAACTCCCTAAGGAATGTATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGAAGCTCGATGGCTTTGTaGATACCCTCCATAACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CLFHKDAIWSERHCLALGSSMAL*IPSITL Trigger: CAAGGTTATGGAGGGTATCCACAAAGCCATCGAGCT...TCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGACTTGTTGCCGTCAAATaGCATGTACTCAATGAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: CLFHKDAIWSERHCLALGLVAVK*HVLNEA Trigger: CGCTTCATTGAGTACATGCCATTTGACGGCAACAAG...TCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGATACATTCCTTAGGGAGTTTGTGCTTTTCCTTCCTCTAAGTGGGTTCCTCATCTTTTCCTCAGCCTaGATTGCATCCCCTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CDTFLREFVLFLPLSGFLIFSSA*IASPWE Trigger: CTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGAT...GAGGAACCCACTTAGAGGAAGGAAAAGCACAAACTCCCTAAGGAATGTATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAACTTGGGGAGCAGCTTACAATTCCATaGTGCTGTTCATCACCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQGFYSCTNIMTKKQLGEQLTIP*CCSSPR Trigger: CCTTGGTGATGAACAGCAGCATGGAATTGTAAGCTG...CTCCCCAAGTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| 3UTR CCA 72 bp | TGGCAGCCGAGGTCAGCGCCTCCATCTCTACCCCGGTaGGACCCCGGGCCCGGCAGGATGCCTGGATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: WQPRSAPPSLPR*DPGPGRMPGST Trigger: TGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACCGGGGTAGAGATGGAGGCGCTGACCTCGGCTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGGGATCCCAGGAGAAATaGCTCCAACGAGCTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VGPRARQDAWINTAWRVLGSQEK*LQRAGG Trigger: CCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCC...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCAGCAGCCGGGCTAGGTaGATGCCGTTGGTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGSFSSPGHRCRMVSSISSSRAR*MPLVVR Trigger: CCTCACCACCAACGGCATCAACCTAGCCCGGCTGCT...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR CCA 72 bp | CCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTaGCGTGTGCTGTCTAACTCCAGGTGTACCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: PRARQDAWINTA*RVLSNSRCTCT Trigger: CGTGCAGGTACACCTGGAGTTAGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTGGATCCCAGGAGAAATaGCTCCAACGAGCTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WDPGPGRMPGSTQRGVCCGSQEK*LQRAGG Trigger: CCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCC...ACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCAGCATTGAGCCCTGCTaGCTGAAGTCGGGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSFSSPGHRCRMVSSISSIEPC*LKSGQQ Trigger: CTGCTGCCCCGACTTCAGCAAGCAGGGCTCAATGCT...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGCCAGTGAGACGGATCTaGTCCACACCTTCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VGPRARQDAWINTAWRVLPVRRI*STPSFT Trigger: TGTGAAGGAAGGTGTGGACAAGATCCGTCTCACTGG...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCTGTATCAAAACTCCCATaGCCAGAGTCCTGGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GPRARQDAWINTAWRVLSVSKLP*PESWKV Trigger: CACCTTCCAGGACTCTGGCAATGGGAGTTTTGATAC...AGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| 3UTR GCA 72 bp | CCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTaGTGTCTAACTCCAGGTGTACCTGCACGTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGRMPGSTQRGV*CLTPGVPARGS Trigger: TGAGCCACGTGCAGGTACACCTGGAGTTAGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTTTGAAGTTCCACTTGTaGCCGTCAAATGGCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GGTPGPAGCLDQHSVACALKFHL*PSNGMY Trigger: GTACATGCCATTTGACGGCAACAAGTGGAACTTCAA...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCGCTAGGTTGATGCCGTaGGTGGTGAGGCCGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTWIPNTEGIPGEIAPTSARLMP*VVRPMV Trigger: AACCATCGGCCTCACCACCAACGGCATCAACCTAGC...GCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGGCCCAGCTCGATGGCTTaGTGGATACCCTCCATAACC | + |
|
Preference number: 3 (lower is better) Translates to: DSEHGGDPRRNCSNELVGPSSMA*WIPSIT Trigger: GGTTATGGAGGGTATCCACAAAGCCATCGAGCTGGG...CCCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACATGACTGGAGAGTGTGGCACGGATCCCAGGAGAAATaGCTCCAACGAGCTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FPQPELHPLGRHDWRVWHGSQEK*LQRAGG Trigger: CCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCC...GTGCCACACTCTCCAGTCATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| 3UTR CCA 72 bp | TCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTaGCACTTGGATTCCGAACACGGAGGGGATCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STKMPSGQRDTV*HLDSEHGGDPR Trigger: CCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR CCA 72 bp | GGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTaGTCCACAAGTGTGCATCCTGTCGGAAGAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVGRCWHKTLGL*STSVHPVGREG Trigger: GCCTTCTCTTCCGACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTCTGAATTGCATCCCCTaGGGAGACATGACTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGLNCIP*GDMTGE Trigger: CTCTCCAGTCATGTCTCCCAAGGGGATGCAATTCAG...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR TCA 72 bp | AGTTCCACTTGTTGCCGTCAAATGGCATGTACTCAATaGAGCGCACGTCCAAGGGAAGGCCCTCTGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSTCCRQMACTQ*SARPREGPLSG Trigger: CCCTGACAGAGGGCCTTCCCTTGGACGTGCGCTTCATTGAGTACATGCCATTTGACGGCAACAAGTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR CCA 72 bp | CAGACCCTAGGCACTGTTGAGACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCCACAAAGATGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QTLGTVETEEGP*GCSVSSTKMPS Trigger: AGATGGCATCTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR CCA 72 bp | GGGTATCCAGTATCAAAACTCCCATTGCCAGAGTCCTaGAAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GYPVSKLPLPES*KVSRPQVSSGD Trigger: GTCACCAGAGGACACCTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGGGAGTTTTGATACTGGATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGATACCCTCCATAACCTaGTGGAAGCCTTTTCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: RCHLVRETLSGTWIPNTEIPSIT*WKPFLR Trigger: CCGCAGAAAAGGCTTCCACAAGGTTATGGAGGGTAT...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174647.2 |
||
| 3UTR GCA 72 bp | GTGTGTGTCTTGGGTATCCAGTATCAAAACTCCCATTaGCAGAGTCCTGGAAGGTGTCAAGGCCTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCVLGIQYQNSH*QSPGRCQGLRC Trigger: ACACCTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGGGAGTTTTGATACTGGATACCCAAGACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR CCA 72 bp | TTGGGGATGCAGTGTCTCTTCCACAAAGATGCCATCTaGTCAGAGAGACACTGTCTGGCACTTGGATTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LGMQCLFHKDAI*SERHCLALGFR Trigger: TCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACACTGCATCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR GCA 72 bp | TTTAGAGGGATATGGCATCTTTTCCTCAGCCTGAATTaGATCCCCTTGGGAGACATGACTGGAGAGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FRGIWHLFLSLN*IPLGDMTGECG Trigger: GCCACACTCTCCAGTCATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATCCCTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGTTCTTGAAGTTCCACTaGTTGCCGTCAAATGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: VSLPQRCHLVRETLSGTWFLKFH*LPSNGM Trigger: CATGCCATTTGACGGCAACAAGTGGAACTTCAAGAA...CCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR TCA 72 bp | ATTCTCTCCCCGGGGAAGAGAAGAGAGGACCCTAAATaGGAAGGGCTGCATAAAGCTGTCTGTCTGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: ILSPGKRREDPK*EGLHKAVCLKQ Trigger: TTGTTTCAGACAGACAGCTTTATGCAGCCCTTCTCATTTAGGGTCCTCTCTTCTCTTCCCCGGGGAGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTTTGAAGTTCCACTTGTaGCCGTCAAATGGCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPQRCHLVRETLSGTWILKFHL*PSNGMY Trigger: GTACATGCCATTTGACGGCAACAAGTGGAACTTCAA...AATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| 3UTR TCA 72 bp | ACCCTAAATGAGAAGGGCTGCATAAAGCTGTCTGTCTaGAACAACCTGAGCAATATGATGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLNEKGCIKLSV*NNLSNMMCVCV Trigger: CACACACACACACATCATATTGCTCAGGTTGTTTCAGACAGACAGCTTTATGCAGCCCTTCTCATTTAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR CCA 72 bp | GTGATCCTAGGTCTAATCACTAGATTTAGAGGGATATaGCATCTTTTCCTCAGCCTGAATTGCATCCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VILGLITRFRGI*HLFLSLNCIPL Trigger: CAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATCCCTCTAAATCTAGTGATTAGACCTAGGATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR TCA 72 bp | GTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAACTTGGGGAGGAAAGGGTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: VLVRVSIPAQTS*PRSNLGRKGFI Trigger: AATAAACCCTTTCCTCCCCAAGTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTGGCCAAAGCTGTCCGTaGGGAAGGCAGAGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPAASPALATAVGWCPASGQSCP*GRQRRE Trigger: CTCCCTTCTCTGCCTTCCTCACGGACAGCTTTGGCC...AGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
||
| CDS-3UTR GCA 90 bp | GGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTCTTTGAACATGCCTGCGTaGTGCCGCTTCTTCCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRARQDAWINTAWRVLSLNMPA*CRFFLP Trigger: GGGTAGGAAGAAGCGGCAGCACGCAGGCATGTTCAA...AGACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| CDS-3UTR CCA 90 bp | AGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCCATCTCTACCCCGGTaGGACCCCGGGCCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLTLLFLTHARVDRCGPSLPR*DPGPGR Trigger: CCTGCCGGGCCCGGGGTCCCACCGGGGTAGAGATGG...CCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGTTGTAACCCAGCTCGATaGCTTTGTGGATACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WDPGPGRMPGSTQRGVCCCNPAR*LCGYPP Trigger: TGGAGGGTATCCACAAAGCCATCGAGCTGGGTTACA...ACAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTGGAGCCGCATGCTCCTaGAGGAACTGGAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGGAACS*RNWSLR Trigger: CCTGAGGCTCCAGTTCCTCCAGGAGCATGCGGCTCC...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGAGCCGCATGCTCCTaGAGGAACTGGAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSEHGGDPRRNCSNELVGAACS*RNWSLR Trigger: CCTGAGGCTCCAGTTCCTCCAGGAGCATGCGGCTCC...CACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR GCA 90 bp | TTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGAGAAGGGAGCCGCATaGTCCTGGAGGAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSEHGGDPRRNCSNELVEKGAA*SWRNWS Trigger: GCTCCAGTTCCTCCAGGAGCATGCGGCTCCCTTCTC...CACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGAACGGGGCATCAGGTGCCTaGGACCCTGTGCTAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLTHARVDRCGQTTVNGASGA*DPVLRH Trigger: GTGCCTTAGCACAGGGTCCCAGGCACCTGATGCCCC...GTTCACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGCCGTCAGGGCAGCCATaGCAGCCGAGGTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKVTFDAPFPDTCQSRQVPSGQP*QPRSAP Trigger: AGGCGCTGACCTCGGCTGCCATGGCTGCCCTGACGG...CACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAACCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAGGCCAAAGCTGTCCGTaGGGAAGGCAGAGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEPGVGRCWHKTLGLWSTGQSCP*GRQRRE Trigger: CTCCCTTCTCTGCCTTCCTCACGGACAGCTTTGGCC...TGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGTGGTCCCGCAGTaGCACCTCAGAGTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IWSERHCLALGFRTRRGSQVVPQ*HLRVPK Trigger: TTTGGGAACTCTGAGGTGTCACTGCGGGACCACCTG...GGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| CDS-3UTR TCA 90 bp | ACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGCAGGTGGTCCCGCAGTaGCACCTCAGAGTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLFLTHARVDRCGQTTVQVVPQ*HLRVPK Trigger: TTTGGGAACTCTGAGGTGTCACTGCGGGACCACCTG...CACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCATCCTGTCGAGAAGGGAGCCGCATaGTCCTGGAGGAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRCWHKTLGLWSTSVHPVEKGAA*SWRNWS Trigger: GCTCCAGTTCCTCCAGGAGCATGCGGCTCCCTTCTC...GACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGAGAAGGGAGCCGCATaGTCCTGGAGGAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTFDAPFPDTCQSRQVWAEKGAA*SWRNWS Trigger: GCTCCAGTTCCTCCAGGAGCATGCGGCTCCCTTCTC...TGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATTCAGTAGGTCAGCTTTaGGGGTCAGGGGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGQRDTVWHLDSEHGGDSVGQL*GSGAHP Trigger: AGGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGA...ATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCATCCCTAGGCACTGTTaGGACAGAGGAAGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTLLFLTHARVDRCGQTIPRHC*DRGRAL Trigger: CAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGAT...GGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGGAGCCGCATGCTCCTaGAGGAACTGGAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAGTVVYWYAVRVKVTFGAACS*RNWSLR Trigger: CCTGAGGCTCCAGTTCCTCCAGGAGCATGCGGCTCC...AAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGGTTCCCATCAGCTGTaGTGCGCAACCGGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGTVVYWYAVRVKVTFDGSHQL*CATGCR Trigger: CCTGCAACCGGTTGCGCATCACAGCTGATGGGAACC...GTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTGAAGGGCCTTGGGGATaGAGTGTCTCTTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGEGPWG*SVSSTK Trigger: CTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTC...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTTCGGGCATGCAATACTaGCATCGGAGGTTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGSGMQY*HRRLHF Trigger: GAAGTGCAACCTCCGATGCCAGTATTGCATGCCCGA...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | GATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGGAGCTCGATGGCTTTGTaGATACCCTCCATAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSEHGGDPRRNCSNELVGSSMAL*IPSITL Trigger: CAAGGTTATGGAGGGTATCCACAAAGCCATCGAGCT...CCCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR TCA 90 bp | GTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACGGCCAAAGCTGTCCGTaGGGAAGGCAGAGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYWYAVRVKVTFDAPFPDGQSCP*GRQRRE Trigger: CTCCCTTCTCTGCCTTCCTCACGGACAGCTTTGGCC...GTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACTCAAAAGTACCCCGATaGGGATCATGGGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFDAPFPDTCQSRQVWADSKVPR*GSWAGS Trigger: AGAACCGGCCCATGATCCTCATCGGGGTACTTTTGA...GTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGAATCAAAAGTACCCCGATaGGGATCATGGGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: APFPDTCQSRQVWADHSESKVPR*GSWAGS Trigger: AGAACCGGCCCATGATCCTCATCGGGGTACTTTTGA...TTCACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR TCA 90 bp | GATATGGCATCTTTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACATGACTGGGACCCTAGGCACTGTTaGGACAGAGGAAGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DMASFPQPELHPLGRHDWDPRHC*DRGRAL Trigger: CAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGTC...CCAGTCATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | ACAATTCCATGCTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGAGAAGGGAGCCGCATaGTCCTGGAGGAACTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TIPCCCSSPRKSGLELKQEKGAA*SWRNWS Trigger: GCTCCAGTTCCTCCAGGAGCATGCGGCTCCCTTCTC...CTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGCATGGAATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGAGCCACCGCTGTCGGATaGTGTCCAGCATCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRVKVTFDAPFPDTCQSRATAVG*CPASPC Trigger: ACAAGGAGATGCTGGACACCATCCGACAGCGGTGGC...TCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGGCCACCGCTGTCGGATaGTGTCCAGCATCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKVTFDAPFPDTCQSRQVATAVG*CPASPC Trigger: ACAAGGAGATGCTGGACACCATCCGACAGCGGTGGC...CACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTCAGAGAGACACTGTCTaGCACTTGGATTCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGQRDTV*HLDSEH Trigger: GTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTG...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCGGGGGATCAACTGACTaGTTAGCTTGGCTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WYAVRVKVTFDAPFPDTCGGSTD*LAWLPG Trigger: TCCAGGCAGCCAAGCTAACCAGTCAGTTGATCCCCC...GCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATCAGTAGGTCAGCTTTaGGGGTCAGGGGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YWYAVRVKVTFDAPFPDTSVGQL*GSGAHP Trigger: AGGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGA...TGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACTCAGTAGGTCAGCTTTaGGGGTCAGGGGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYWYAVRVKVTFDAPFPDSVGQL*GSGAHP Trigger: AGGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGA...GTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACATCAGGATCTCCTCTGTaGTCAGTAGGTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLFLTHARVDRCGQTTSGSPL*SVGQLW Trigger: CCAAAGCTGACCTACTGACCACAGAGGAGATCCTGA...TGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGAACTCAGGATCTCCTCTGTaGTCAGTAGGTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFLTHARVDRCGQTTVNSGSPL*SVGQLW Trigger: CCAAAGCTGACCTACTGACCACAGAGGAGATCCTGA...GTTCACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTAGCTCGATGGCTTTGTaGATACCCTCCATAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGSSMAL*IPSITL Trigger: CAAGGTTATGGAGGGTATCCACAAAGCCATCGAGCT...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCATCCTGTCGGATGTAACCCAGCTCGATaGCTTTGTGGATACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCWHKTLGLWSTSVHPVGCNPAR*LCGYPP Trigger: TGGAGGGTATCCACAAAGCCATCGAGCTGGGTTACA...TCCGACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTCCGAACACGGAGTGTAACCCAGCTCGATaGCTTTGTGGATACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCHLVRETLSGTWIPNTECNPAR*LCGYPP Trigger: TGGAGGGTATCCACAAAGCCATCGAGCTGGGTTACA...CTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGTVVYWYAVRVKVTFDTEEGP*GCSVSS Trigger: GGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGT...GTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGTVVYWYAVRVKVTFTEEGP*GCSVSS Trigger: GGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGT...AAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACAGTCCAAGAAGAACCATaGCAGAGGCCACAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YWYAVRVKVTFDAPFPDTVQEEP*QRPQPP Trigger: GGGTGGCTGTGGCCTCTGCCATGGTTCTTCTTGGAC...TGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGAGAAGGGCCTTGGGGATaGAGTGTCTCTTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRVKVTFDAPFPDTCQSREGPWG*SVSSTK Trigger: CTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTC...TCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCAACGAGCTGGTaGGGAATCCTGAAGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAGTVVYWYAVRVKVTFDAPTSW*GILKHQ Trigger: TTGATGCTTCAGGATTCCCCACCAGCTCGTTGGAGC...GTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGAGCTCCAACGAGCTGGTaGGGAATCCTGAAGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVKVTFDAPFPDTCQSRAPTSW*GILKHQ Trigger: TTGATGCTTCAGGATTCCCCACCAGCTCGTTGGAGC...TCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTATTGCTCCAACGAGCTaGTGGGGAATCCTGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVRVKVTFDAPFPDTCQSIAPTS*WGILKH Trigger: ATGCTTCAGGATTCCCCACCAGCTCGTTGGAGCAAT...ACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| 3UTR CAA 72 bp | TGTGTGTGTCTTGGGTATCCAGTATCAAAACTCCCATaGCCAGAGTCCTGGAAGGTGTCAAGGCCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCLGYPVSKLP*PESWKVSRPQV Trigger: CACCTGAGGCCTTGACACCTTCCAGGACTCTGGCAATGGGAGTTTTGATACTGGATACCCAAGACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAGTGAGCCCTTATTCTCTCCCCGGGGAAGAGAAGAGAGGACCCTAAATAATATTGAACATGCCTaGGTGCTGCCGCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSEPLFSPRGREERTLNNIEHA*VLPLLP Trigger: AGGAAGAAGCGGCAGCACGCAGGCATGTTCAATATT...ATTTAGGGTCCTCTCTTCTCTTCCCCGGGGAGAGAATAAGGGCTCACTAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGAACTCTCTTCCACAAAGATaGCATCTGGTCAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFLTHARVDRCGQTTVNSLPQR*HLVRET Trigger: TGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA...GTTCACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | CACTCACAGTTCTATATGACAGTTCATCATCAAAAGCAACAAGAGCAGGAACTCGGAGCCGCATGCTCCTaGAGGAACTGGAGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQFYMTVHHQKQQEQELGAACS*RNWSLR Trigger: CCTGAGGCTCCAGTTCCTCCAGGAGCATGCGGCTCC...GAGTTCCTGCTCTTGTTGCTTTTGATGATGAACTGTCATATAGAACTGTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CCA 90 bp | TGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCAGCTCGATGGCTTTGTaGATACCCTCCATAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WYAVRVKVTFDAPFPDTCSSMAL*IPSITL Trigger: CAAGGTTATGGAGGGTATCCACAAAGCCATCGAGCT...GCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | AGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCATCCTGTCGGACTTGTTGCCGTCAAATaGCATGTACTCAATGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCWHKTLGLWSTSVHPVGLVAVK*HVLNEA Trigger: CGCTTCATTGAGTACATGCCATTTGACGGCAACAAG...TCCGACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| 3UTR CAA 72 bp | ATATGGCATCTTTTCCTCAGCCTGAATTGCATCCCCTaGGGAGACATGACTGGAGAGTGTGGCACTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWHLFLSLNCIP*GDMTGECGTLS Trigger: GCTTAGAGTGCCACACTCTCCAGTCATGTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024797.16 |
||
| CDS-3UTR GCA 90 bp | TCCAAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTAATATTGAACATGCCTaGGTGCTGCCGCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGTVVYWYAVRVKVTFNIEHA*VLPLLP Trigger: AGGAAGAAGCGGCAGCACGCAGGCATGTTCAATATT...AAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACAATATTGAACATGCCTaGGTGCTGCCGCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGTVVYWYAVRVKVTFDNIEHA*VLPLLP Trigger: AGGAAGAAGCGGCAGCACGCAGGCATGTTCAATATT...GTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAGTGAGCCCTTATTCTCTCCCCGGGGAAGAGAAGAGAGGACCCTAAATTCTCTTCCACAAAGATaGCATCTGGTCAGAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSEPLFSPRGREERTLNSLPQR*HLVRET Trigger: TGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA...ATTTAGGGTCCTCTCTTCTCTTCCCCGGGGAGAGAATAAGGGCTCACTAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173033.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATTTCAGGATCTCCTCTGTaGTCAGTAGGTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPQRCHLVRETLSGTWISGSPL*SVGQLW Trigger: CCAAAGCTGACCTACTGACCACAGAGGAGATCCTGA...AATCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACCAGAGAGACACTGTCTaGCACTTGGATTCCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VYWYAVRVKVTFDAPFPDQRDTV*HLDSEH Trigger: GTGTTCGGAATCCAAGTGCCAGACAGTGTCTCTCTG...GTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAACTTTCAGTAGGTCAGCTTTaGGGGTCAGGGGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSQGFYSCTNIMTKKQLSVGQL*GSGAHP Trigger: AGGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGA...AAGTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACTTGTTGCCGTCAAATaGCATGTACTCAATGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRVKVTFDAPFPDTCQSRLVAVK*HVLNEA Trigger: CGCTTCATTGAGTACATGCCATTTGACGGCAACAAG...TCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCACTCACAGTTCTATATGACAGTTCATCATCAAAAGCAACAAGAGCAGGAGGCCAAAGCTGTCCGTaGGGAAGGCAGAGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLTVLYDSSSSKATRAGGQSCP*GRQRRE Trigger: CTCCCTTCTCTGCCTTCCTCACGGACAGCTTTGGCC...TCCTGCTCTTGTTGCTTTTGATGATGAACTGTCATATAGAACTGTGAGTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CCA 90 bp | CACTCACAGTTCTATATGACAGTTCATCATCAAAAGCAACAAGAGCAGGAACTCTCAGGATCTCCTCTGTaGTCAGTAGGTCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQFYMTVHHQKQQEQELSGSPL*SVGQLW Trigger: CCAAAGCTGACCTACTGACCACAGAGGAGATCCTGA...GAGTTCCTGCTCTTGTTGCTTTTGATGATGAACTGTCATATAGAACTGTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS CCA 90 bp | GGCGAGGCTGCGTCACCGGAGCCCCCGAGCTGCAACCCCGAGCATTaGACCTCAGGAGCTGCCGCACTATTCCGAACGCAGGCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GEAASPEPPSCNPEH*TSGAAALFRTQAAP Trigger: CGGCGCGGCCTGCGTTCGGAATAGTGCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAGCTCGGGGGCTCCGGTGACGCAGCCTCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024797.16 ENSMUST00000165390.9 ENSMUST00000173033.8 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| CDS-3UTR CAA 90 bp | TCCGGCAGCTTCTCCAGCCCTGGCCACCGCTGTCGGATGGTGTCCAGCATCTCCCTGCAACCCCGAGCATaGGACCTCAGGAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSFSSPGHRCRMVSSISLQPRA*DLRSCR Trigger: GCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAG...GGAGATGCTGGACACCATCCGACAGCGGTGGCCAGGGCTGGAGAAGCTGCCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTAGCATTGAGCCCTGCTaGCTGAAGTCGGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTPGPAGCLDQHSVACASIEPC*LKSGQQ Trigger: CTGCTGCCCCGACTTCAGCAAGCAGGGCTCAATGCT...AGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGACCCCGGGCCCGGCAGGATGCCTGGATCAACACAGCGTGGCGTGTGCTGAGCATTGAGCCCTGCTaGCTGAAGTCGGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGPRARQDAWINTAWRVLSIEPC*LKSGQQ Trigger: CTGCTGCCCCGACTTCAGCAAGCAGGGCTCAATGCT...CAGCACACGCCACGCTGTGTTGATCCAGGCATCCTGCCGGGCCCGGGGTCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | CACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCTGCAACCCCGAGCATaGGACCTCAGGAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HCLALGFRTRRGSQEKLLLQPRA*DLRSCR Trigger: GCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAG...GAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 ENSMUST00000174647.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCTGCAACCCCGAGCATaGGACCTCAGGAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TFDAPFPDTCQSRQVWADLQPRA*DLRSCR Trigger: GCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAG...GTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGGGGGCTAGGTTGATGCCGTaGGTGGTGAGGCCGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DSEHGGDPRRNCSNELVGARLMP*VVRPMV Trigger: AACCATCGGCCTCACCACCAACGGCATCAACCTAGC...CCCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | ACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGTGAGCAGCCGGGCTAGGTaGATGCCGTTGGTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLTHARVDRCGQTTVSSRAR*MPLVVR Trigger: CCTCACCACCAACGGCATCAACCTAGCCCGGCTGCT...CACTGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGGTCAGTAGGTCAGCTTaGGGGGTCAGGGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLTLLFLTHARVDRCGVSRSA*GVRGTP Trigger: GGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGAC...CCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGAGCATTGAGCCCTGCTaGCTGAAGTCGGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGVGRCWHKTLGLWSTSVSIEPC*LKSGQQ Trigger: CTGCTGCCCCGACTTCAGCAAGCAGGGCTCAATGCT...CACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGGAATCCTGAAGCATCAAAAGTACCCTGATAGGTCACCCACCGATGAGGTCAGTAGGTCAGCTTaGGGGGTCAGGGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: WWGILKHQKYPDRSPTDEVSRSA*GVRGTP Trigger: GGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGAC...CTCATCGGTGGGTGACCTATCAGGGTACTTTTGATGCTTCAGGATTCCCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGGAATCCTGAAGCATCAAAAGTACCCTGATAGGTCACCCACCGATGAGAGCAGCCGGGCTAGGTaGATGCCGTTGGTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWGILKHQKYPDRSPTDESSRAR*MPLVVR Trigger: CCTCACCACCAACGGCATCAACCTAGCCCGGCTGCT...CTCATCGGTGGGTGACCTATCAGGGTACTTTTGATGCTTCAGGATTCCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGGGATATGGCATCTTTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACCTGCAACCCCGAGCATaGGACCTCAGGAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRGIWHLFLSLNCIPLGDLQPRA*DLRSCR Trigger: GCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAG...GTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATCCCTCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGGTCAGTAGGTCAGCTTaGGGGGTCAGGGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: VKVTFDAPFPDTCQSRQVVSRSA*GVRGTP Trigger: GGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGAC...CACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTAGGTTGATGCCGTaGGTGGTGAGGCCGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETLSGTWIPNTEGIPGEIARLMP*VVRPMV Trigger: AACCATCGGCCTCACCACCAACGGCATCAACCTAGC...AATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCCCAGCTCGATGGCTTaGTGGATACCCTCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: PGVGRCWHKTLGLWSTSVPSSMA*WIPSIT Trigger: GGTTATGGAGGGTATCCACAAAGCCATCGAGCTGGG...CACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCATACCCTCCATAACCTaGTGGAAGCCTGCGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GTWIPNTEGIPGEIAPTSIPSIT*WKPAIT Trigger: GGTGATCGCAGGCTTCCACAAGGTTATGGAGGGTAT...GCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | GTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGGATCCCAGGAGAAATaGCTCCAACGAGCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTFDAPFPDTCQSRQVWAGSQEK*LQRAGG Trigger: CCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCC...TGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CAA 90 bp | TTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGGCAGACCACAGGATCCCAGGAGAAATaGCTCCAACGAGCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LTLLFLTHARVDRCGQTTGSQEK*LQRAGG Trigger: CCCACCAGCTCGTTGGAGCAATTTCTCCTGGGATCC...TGTGGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173033.8 ENSMUST00000173430.2 |
||
| CDS-3UTR CAA 90 bp | ACAATTCCATGCTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGTAGGTCAGCTTaGGGGGTCAGGGGCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: TIPCCCSSPRKSGLELKQVSRSA*GVRGTP Trigger: GGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGAC...CTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGCATGGAATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CAA 90 bp | TTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTGCTCCAACGAGCTGGTGCCAGTGAGACGGATCTaGTCCACACCTTCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LDSEHGGDPRRNCSNELVPVRRI*STPSFT Trigger: TGTGAAGGAAGGTGTGGACAAGATCCGTCTCACTGG...CACCAGCTCGTTGGAGCAATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACCAGGTGTGGGTAGATGCTGGCACAAGACCTTAGGGTTGTGGTCCACACCCAGCTCGATGGCTTaGTGGATACCCTCCATAACC | + |
|
Preference number: 5 (lower is better) Translates to: TEPGVGRCWHKTLGLWSTPSSMA*WIPSIT Trigger: GGTTATGGAGGGTATCCACAAAGCCATCGAGCTGGG...TGTGGACCACAACCCTAAGGTCTTGTGCCAGCATCTACCCACACCTGGTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGCACAAGACCTTAGGGTTGTGGTCCACAAGTGTGCATCCTGTCGGAAGATACTGGCATCGGAGGTaGCACTTCTCTGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CWHKTLGLWSTSVHPVGRYWHRR*HFSVRE Trigger: CTCTCTCACAGAGAAGTGCAACCTCCGATGCCAGTA...TCTTCCGACAGGATGCACACTTGTGGACCACAACCCTAAGGTCTTGTGCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GAGACACTGTCTGGCACTTGGATTCCGAACACGGAGGGGATCCCAGGAGAAATTCCAGTGAGACGGATCTaGTCCACACCTTCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ETLSGTWIPNTEGIPGEIPVRRI*STPSFT Trigger: TGTGAAGGAAGGTGTGGACAAGATCCGTCTCACTGG...AATTTCTCCTGGGATCCCCTCCGTGTTCGGAATCCAAGTGCCAGACAGTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGCTGGCACCGTGGTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGCTAGGTTGATGCCGTaGGTGGTGAGGCCGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKAGTVVYWYAVRVKVTFARLMP*VVRPMV Trigger: AACCATCGGCCTCACCACCAACGGCATCAACCTAGC...AAAGGTGACCTTTACCCTCACAGCGTACCAATAAACCACGGTGCCAGCTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GATACATTCCTTAGGGAGTTTGTGCTTTTCCTTCCTCTAAGTGGGTTCCTCTGCAGCAGCCGGGCTAGGTaGATGCCGTTGGTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DTFLREFVLFLPLSGFLCSSRAR*MPLVVR Trigger: CCTCACCACCAACGGCATCAACCTAGCCCGGCTGCT...GCAGAGGAACCCACTTAGAGGAAGGAAAAGCACAAACTCCCTAAGGAATGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGTACTGGCATCGGAGGTaGCACTTCTCTGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVTFDAPFPDTCQSRQVWYWHRR*HFSVRE Trigger: CTCTCTCACAGAGAAGTGCAACCTCCGATGCCAGTA...CCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTCTTCCACAAAGATGCCATCTGGTCAGAGAGACACTGTCTGGCACTTGGATACTGGCATCGGAGGTaGCACTTCTCTGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLFHKDAIWSERHCLALGYWHRR*HFSVRE Trigger: CTCTCTCACAGAGAAGTGCAACCTCCGATGCCAGTA...TCCAAGTGCCAGACAGTGTCTCTCTGACCAGATGGCATCTTTGTGGAAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173362.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGTGGATACCCTCCATAACCTaGTGGAAGCCTTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTFDAPFPDTCQSRQVWIPSIT*WKPFLR Trigger: CCGCAGAAAAGGCTTCCACAAGGTTATGGAGGGTAT...CCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGTCAAGGCCTCAGGTGTCCTCTGGTGACGACACCTCACAGGTTAGTGGTTTGAAGTTCCACTTGTaGCCGTCAAATGGCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KVSRPQVSSGDDTSQVSGLKFHL*PSNGMY Trigger: GTACATGCCATTTGACGGCAACAAGTGGAACTTCAA...ACCACTAACCTGTGAGGTGTCGTCACCAGAGGACACCTGAGGCCTTGACACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACCCAGTGAGACGGATCTaGTCCACACCTTCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VYWYAVRVKVTFDAPFPDPVRRI*STPSFT Trigger: TGTGAAGGAAGGTGTGGACAAGATCCGTCTCACTGG...GTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAGGTCACCTTTGACGCTCCTTTTCCTGACACATGCCAGAGTAGACAGGTGATACCCTCCATAACCTaGTGGAAGCCTTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VKVTFDAPFPDTCQSRQVIPSIT*WKPFLR Trigger: CCGCAGAAAAGGCTTCCACAAGGTTATGGAGGGTAT...CACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCAAAGGTGACCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAGGGGTTTATTTCACTCACAGTTCTATATGACAGTTCATCATCAAAAGCTGCAACCCCGAGCATaGGACCTCAGGAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRGLFHSQFYMTVHHQKLQPRA*DLRSCR Trigger: GCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAG...CTTTTGATGATGAACTGTCATATAGAACTGTGAGTGAAATAAACCCCTCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAACTTGGGGAGGACCAGTGAGACGGATCTaGTCCACACCTTCCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGFLFLHKHHDQEATWGGPVRRI*STPSFT Trigger: TGTGAAGGAAGGTGTGGACAAGATCCGTCTCACTGG...TCCTCCCCAAGTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAGGGATATGGCATCTTTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACTTGAAGTTCCACTTGTaGCCGTCAAATGGCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: FRGIWHLFLSLNCIPLGDLKFHL*PSNGMY Trigger: GTACATGCCATTTGACGGCAACAAGTGGAACTTCAA...GTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATCCCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| CDS-3UTR CAA 90 bp | TTTAGAGGGATATGGCATCTTTTCCTCAGCCTGAATTGCATCCCCTTGGGAGACTTCTTGAAGTTCCACTaGTTGCCGTCAAATGGCATG | + |
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Preference number: 5 (lower is better) Translates to: FRGIWHLFLSLNCIPLGDFLKFH*LPSNGM Trigger: CATGCCATTTGACGGCAACAAGTGGAACTTCAAGAA...GTCTCCCAAGGGGATGCAATTCAGGCTGAGGAAAAGATGCCATATCCCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTGGTACGCTGTGAGGGTAAAGGTCACCTTTGACGCTCCTTTTCCTGACTTCTTGAAGTTCCACTaGTTGCCGTCAAATGGCATG | + |
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Preference number: 5 (lower is better) Translates to: VYWYAVRVKVTFDAPFPDFLKFH*LPSNGM Trigger: CATGCCATTTGACGGCAACAAGTGGAACTTCAAGAA...GTCAGGAAAAGGAGCGTCAAAGGTGACCTTTACCCTCACAGCGTACCAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024797.16 ENSMUST00000173033.8 |
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| CDS-3UTR CAA 90 bp | AAGGAGGGGTTTATTTCACTCACAGTTCTATATGACAGTTCATCATCAAAAGCATACTGGCATCGGAGGTaGCACTTCTCTGTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KEGFISLTVLYDSSSSKAYWHRR*HFSVRE Trigger: CTCTCTCACAGAGAAGTGCAACCTCCGATGCCAGTA...TGCTTTTGATGATGAACTGTCATATAGAACTGTGAGTGAAATAAACCCCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165390.9 |
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| CDS CCA 72 bp | GCGTCACCGGAGCCCCCGAGCTGCAACCCCGAGCATTaGACCTCAGGAGCTGCCGCACTATTCCGAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASPEPPSCNPEH*TSGAAALFRTQ Trigger: CTGCGTTCGGAATAGTGCGGCAGCTCCTGAGGTCCAATGCTCGGGGTTGCAGCTCGGGGGCTCCGGTGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024797.16 ENSMUST00000165390.9 ENSMUST00000173033.8 ENSMUST00000173362.8 ENSMUST00000174647.2 |
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| CDS TCA 72 bp | TCCGCAGGTAACTATGTTGTCGGCCAAAGCTGTCCGTaGGGAAGGCAGAGAAGGGAGCCGCATGCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SAGNYVVGQSCP*GRQRREPHAPG Trigger: TCCAGGAGCATGCGGCTCCCTTCTCTGCCTTCCTCACGGACAGCTTTGGCCGACAACATAGTTACCTGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024797.16 ENSMUST00000165390.9 ENSMUST00000173033.8 ENSMUST00000173362.8 |
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| CDS TCA 72 bp | GGTTGTGGTCCACAAGTGTGCATCCCTAGGCACTGTTaGGACAGAGGAAGGGCCTTGGGGATGCAGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GCGPQVCIPRHC*DRGRALGMQCL Trigger: GAGACACTGCATCCCCAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGATGCACACTTGTGGACCACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173430.2 |
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| CDS CCA 72 bp | GCATCCCTAGGCACTGTTGAGACAGAGGAAGGGCCTTaGGGATGCAGTGTCTCTTCCACAAAGATGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ASLGTVETEEGP*GCSVSSTKMPS Trigger: AGATGGCATCTTTGTGGAAGAGACACTGCATCCCCAAGGCCCTTCCTCTGTCTCAACAGTGCCTAGGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173430.2 |
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| CDS CCA 72 bp | AGCTCGATGGCTTTGTGGATACCCTCCATAACCTTGTaGAAGCCTGCGATCACCTTTTCTGCGGACGATGAA | + |
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Preference number: 6 (lower is better) Translates to: SSMALWIPSITL*KPAITFSADDE Trigger: TTCATCGTCCGCAGAAAAGGTGATCGCAGGCTTCCACAAGGTTATGGAGGGTATCCACAAAGCCATCGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173362.8 |
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