Pregenerated sensors for MOCOS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039616Ensembl transcript IDs: ENSMUST00000068006.9
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGCTTCCAGATGGCGCTaGAAGGCCGGGGGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALGRRNVRRQHLGVSGKGASRWR*KAGGSG Trigger: CCCTGAGCCCCCGGCCTTCCAGCGCCATCTGGAAGC...CCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | CTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTGGGGTCTGCTGGGCGCTaGTGGCTTTGCTCAGAGACG | + |
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Preference number: 4 (lower is better) Translates to: LGRRNVRRQHLGVSGKGVGSAGR*WLCSET Trigger: CGTCTCTGAGCAAAGCCAGCAGCGCCCAGCAGACCC...CACCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | ATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGCCACAGGGGCCCCGTTaGGGTAGCGGAGGGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: MLLGEEMLGDNTWVFLGRPQGPR*GSGGKT Trigger: TGTCTTCCCTCCGCTACCTCAACGGGGCCCCTGTGG...CCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGAGCCCCAGGTGCCTCTaGCAGGCCCCTAAGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: ALGRRNVRRQHLGVSGKGSPRCL*QAPKLQ Trigger: CTGTAACTTAGGGGCCTGCCAGAGGCACCTGGGGCT...CCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | GCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGAGGCCCCAGCATCACTaGTGCTGGCTTGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: ALGRRNVRRQHLGVSGKGRPQHH*CWLEEQ Trigger: CTGTTCCTCAAGCCAGCATCAGTGATGCTGGGGCCT...CCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | GCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGTCTGCTGCAGGTCAATaGAGGGCTGGATCAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ALGRRNVRRQHLGVSGKGSAAGQ*RAGSGR Trigger: TCTGCCTGATCCAGCCCTTCATTGACCTGCAGCAGA...CCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | CTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTGTGCAAGGTAGGCAGCTaGAGTCCCTCCTCCGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LGRRNVRRQHLGVSGKGVCKVGS*SPSSEV Trigger: TACTTCGGAGGAGGGACTGCAGCTGCCTACCTTGCA...CACCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | CTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTGCAGCCAGTCCTCAGGTaGATGTTGTACAGGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGRRNVRRQHLGVSGKGVQPVLR*MLYRLA Trigger: GGCTAGCCTGTACAACATCCACCTGAGGACTGGCTG...CACCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | CTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGGCTGACATAGGAGGCTaGATCCAGCAGCACAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LLGEEMLGDNTWVFLGRGADIGG*IQQHKP Trigger: TGGTTTGTGCTGCTGGATGCAGCCTCCTATGTCAGC...CCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | ATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGAGGTCAATGAAGGGCTaGATCAGGCAGAGCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: MLLGEEMLGDNTWVFLGRRSMKG*IRQSRG Trigger: GCCACGGCTCTGCCTGATCCAGCCCTTCATTGACCT...CCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | CTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGCACGATGTAGTCCTCTaGGGTGGTGTGAAAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLGEEMLGDNTWVFLGRGHDVVL*GGVKVS Trigger: ACTCACTTTCACACCACCCCAGAGGACTACATCGTG...CCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | ATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGCCCGGTTTGCTGGTTaGTACAAATCATCTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: MLLGEEMLGDNTWVFLGRARFAG*YKSSGT Trigger: GGTGCCAGATGATTTGTATCAACCAGCAAACCGGGC...CCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | CTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGAGGCTCCATCCCTTCTaGTTTGATGACCATGATCCT | + |
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Preference number: 4 (lower is better) Translates to: LLGEEMLGDNTWVFLGRGRLHPF*FDDHDP Trigger: AGGATCATGGTCATCAAAGCAGAAGGGATGGAGCCT...CCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGTCTGGGGGAACAAGGTaGCTCCTGCATGGTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKSGGTR*LLHGQG Trigger: ACCTTGACCATGCAGGAGCCACCTTGTTCCCCCAGA...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGAGGTGTGGTTGTCAGTaGGGTAGCAGAAGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKRCGCQ*GSRSDS Trigger: GGAGTCACTTCTGCTACCTCACTGACAACCACACCT...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGCAGAATCGCTGTAAATaGGCACCACAGGGGCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RETLMLLGEEMLGDNTWVQNRCK*APQGPR Trigger: ACGGGGCCCCTGTGGTGCGCATTTACAGCGATTCTG...CACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGTGAAGTTTGTGAGCTaGCTCTGGGGGAACAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKVKFVS*LWGNKV Trigger: CACCTTGTTCCCCCAGAGCCAGCTCACAAACTTCAC...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGTGCTCCACAGTGTCGTaGGTGAGTTTGCTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKCSTVS*VSLLVM Trigger: CATCACCAGCAAACTCACCCACGACACTGTGGAGCA...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGATCATCTGGCACCTGTaGCAAGGCCCTAGAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: FNALGRRNVRRQHLGVSGIIWHL*QGPRTW Trigger: CCAGGTTCTAGGGCCTTGCCACAGGTGCCAGATGAT...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTAAGAGGTGTGGAAGCTaGCAGTCGGGGTCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRNFNALGRRNVRRQHLGKRCGS*QSGSQA Trigger: AGCCTGTGACCCCGACTGTCAGCTTCCACACCTCTT...ACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | CTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTGATCTTTCATGGAGAATaGCTCCTCCTTTCCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGRRNVRRQHLGVSGKGVIFHGE*LLLSMF Trigger: GAACATGGAAAGGAGGAGTCATTCTCCATGAAAGAT...CACCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGTCACTTAGCCCCAGGTaGCTCTGGCAGGCCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLSLSPR*LWQAPK Trigger: CTTAGGGGCCTGCCAGAGGCACCTGGGGCTAAGTGA...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGATGACCATGATCCTCTaGTGCAGGTCAATGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKMTMIL*CRSMKG Trigger: GCCCTTCATTGACCTGCAGCAGAGGATCATGGTCAT...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | ATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGTTCCTGGCATTTCGCTaGAAGTGTGGACTTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: MLLGEEMLGDNTWVFLGRFLAFR*KCGLCL Trigger: CAAGCAAAGTCCACACTTCCAGCGAAATGCCAGGAA...CCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | GAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTATCCTTTCCCTCCGCTaGCCACATGTCCTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ETLMLLGEEMLGDNTWVFILSLR*PHVLWL Trigger: AAGCCAGAGGACATGTGGTCAGCGGAGGGAAAGGAT...AAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGCCAAGGGGGAAGTGCTaGCATAGGAGGCTGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLPRGKC*HRRLHP Trigger: TGGATGCAGCCTCCTATGTCAGCACTTCCCCCTTGG...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGCGTGGCTCCTGCTTCTaGCTCATGCAAATGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: TLMLLGEEMLGDNTWVFLRGSCF*LMQMPL Trigger: CAATGGCATTTGCATGAGTCAGAAGCAGGAGCCACG...CAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTCACCTCCGATCCCACTaGCAGGAAACATGGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSHLRSH*QETWRR Trigger: TCGTCTCCATGTTTCCTGTCAGTGGGATCGGAGGTG...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGCAGGATAGGAGCCATTaGAAACTGAAGGGTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKQDRSH*KLKGLY Trigger: GTACAGACCCTTCAGTTTGCAATGGCTCCTATCCTG...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTGAGCACCCAGGCCTGTaGGGAGCCCAAAGATCTTAT | + |
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Preference number: 4 (lower is better) Translates to: ETLMLLGEEMLGDNTWVFEHPGL*GAQRSY Trigger: ATAAGATCTTTGGGCTCCCCACAGGCCTGGGTGCTC...AAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGTCATACAGCAGCCCTTaGCTCCCCACAGGCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLSYSSP*LPTGHL Trigger: CAAGTGGCCTGTGGGGAGCCAAGGGCTGCTGTATGA...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGCTGTACTCCCAGCTGTaGAGATCACGATGTAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLMLLGEEMLGDNTWVFLLYSQL*RSRCSP Trigger: AGGACTACATCGTGATCTTCACAGCTGGGAGTACAG...CAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTGGAACCTTCCTGAGGTaGGTGACAGTCACTCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: RNFNALGRRNVRRQHLGVGTFLR*VTVTLR Trigger: TCGAAGAGTGACTGTCACTCACCTCAGGAAGGTTCC...AACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTTTCACCAGCAGATACTaGGCCTCGTTCACCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KRNFNALGRRNVRRQHLGFTSRY*ASFTKD Trigger: GTCCTTGGTGAACGAGGCTCAGTATCTGCTGGTGAA...ACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGGAACAAGGTGGCTCCTaGATGGTCAAGGTAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: RETLMLLGEEMLGDNTWVEQGGS*MVKVDS Trigger: ACTGTCTACCTTGACCATGCAGGAGCCACCTTGTTC...CACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGTTTGTGAGCTGGCTCTaGGGGAACAAGGTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLFVSWL*GNKVAP Trigger: AGGAGCCACCTTGTTCCCCCAGAGCCAGCTCACAAA...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTAACAGAAGAGGTGTaGAAGCTGACAGTCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KRNFNALGRRNVRRQHLGVTEEV*KLTVGV Trigger: GACCCCGACTGTCAGCTTCCACACCTCTTCTGTTAC...ACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | ACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGTTGATGATTGGACCCTaGACATCAGGGCTGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: TLMLLGEEMLGDNTWVFLLMIGP*TSGLLN Trigger: GTTCAGCAGCCCTGATGTCCAGGGTCCAATCATCAA...CAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGATCAGGCAGAGCCGTaGCTCCTGCTTCTGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLDQAEP*LLLLTH Trigger: ATGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATC...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTGGACATCAGGGCTGCTaGACTCAGAATCGCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: RNFNALGRRNVRRQHLGVGHQGC*TQNRCK Trigger: TTTACAGCGATTCTGAGTTCAGCAGCCCTGATGTCC...AACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGACGCAGCACAGGATTTaGTGGGGTAGAGGTAAATGT | + |
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Preference number: 4 (lower is better) Translates to: RETLMLLGEEMLGDNTWVTQHRI*WGRGKC Trigger: ACATTTACCTCTACCCCATCAAATCCTGTGCTGCGT...CACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTCACGGAAGCGGGAGATaGGATCTTTCATGGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSHGSGR*DLSWRM Trigger: CATTCTCCATGAAAGATCTCATCTCCCGCTTCCGTG...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGATGCAAGGAGCCAATTaGAATCTCATCCCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FNALGRRNVRRQHLGVSGMQGAN*NLIPLL Trigger: GAGAAGTGGGATGAGATTTCAATTGGCTCCTTGCAT...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGCGAGGAATGAGATGGTaGCATCTTCGAACCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RETLMLLGEEMLGDNTWVRGMRW*HLRTFL Trigger: CAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCG...CACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTCCCATTCAGGATTCCTaGAGCTTTGTCTTGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSPIQDS*SFVLRG Trigger: ACCCCTCAAGACAAAGCTGCAGGAATCCTGAATGGG...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGACCATGATCCTCTGCTaGAGGTCAATGAAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKRNFNALGRRNVRRQHLTMILC*RSMKGW Trigger: CCAGCCCTTCATTGACCTGCAGCAGAGGATCATGGT...CAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGCCTAGAACCTGGAAATaGAAGGAGCCAATTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKPRTWK*KEPIEI Trigger: GATTTCAATTGGCTCCTTGCATTTCCAGGTTCTAGG...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTCGCTGCCCGGTTTGCTaGTTGATACAAATCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSRCPVC*LIQIIW Trigger: CCAGATGATTTGTATCAACCAGCAAACCGGGCAGCG...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGTATTACATCGAGGAATaGGATGGTGCCATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FNALGRRNVRRQHLGVSGYYIEE*DGAIFE Trigger: TTCGAAGATGGCACCATCTCATTCCTCGATGTAATA...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | TTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGTGTGGACTTTGCTTaGTTAAATGACATAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLLGEEMLGDNTWVFLGSVDFA*LNDIDG Trigger: GCCGTCTATGTCATTTAATCAAGCAAAGTCCACACT...TCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR GCA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGCCTGCTTCTGACTCATaGAAATGCCATTGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNALGRRNVRRQHLGVSGPASDS*KCHCDS Trigger: TGAATCACAATGGCATTTGCATGAGTCAGAAGCAGG...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGATTAAAATTGATGATTaGACCCTGGACATCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NALGRRNVRRQHLGVSGKIKIDD*TLDIRA Trigger: AGCCCTGATGTCCAGGGTCCAATCATCAATTTTAAT...CTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTCAAGGCCCTAGAACCTaGAAATGCAAGGAGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSQGPRT*KCKEPI Trigger: AATTGGCTCCTTGCATTTCCAGGTTCTAGGGCCTTG...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR TCA 90 bp | AGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTATGCAAATGCCATTGTaGTTCACAACCATCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNFNALGRRNVRRQHLGVMQMPL*FTTIQL Trigger: GAGCTGGATGGTTGTGAATCACAATGGCATTTGCAT...AACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTAAAGTTACTCTGAGCTaGGTAACAGAAGAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFNALGRRNVRRQHLGVSKVTLS*VTEEVW Trigger: CCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTT...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | GAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCATCGAGGAATGAGATaGTGCCATCTTCGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLMLLGEEMLGDNTWVFHRGMR*CHLRTF Trigger: AAAGGTTCGAAGATGGCACCATCTCATTCCTCGATG...AAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CCA 90 bp | AAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGGGCATCTTCTAGTGTaGACATGTATCCAAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRNFNALGRRNVRRQHLGGHLLV*TCIQRK Trigger: TTTCCTTTGGATACATGTCCACACTAGAAGATGCCC...ACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | GCTCGCTCATGCTGCGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTaGTGGCTTCCAGATGGCGCTGGAAGGCCGGGGGCTCAGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSCCASRSRGPSAV*WLPDGAGRPGAQGP Trigger: GGGGCCCTGAGCCCCCGGCCTTCCAGCGCCATCTGGAAGCCAGCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCATGAGCGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | TTCCTGCTAGGCGGCCAAACTCCTGGTCCCGCAGCTCGCTCATGCTaGGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTGCTGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLGGQTPGPAARSC*ASRSRGPSAVCWLP Trigger: TGGAAGCCAGCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCATGAGCGAGCTGCGGGACCAGGAGTTTGGCCGCCTAGCAGGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | CAGTTCCTGCTAGGCGGCCAAACTCCTGGTCCCGCAGCTCGCTCATaGTGCGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QFLLGGQTPGPAARS*CASRSRGPSAVCWL Trigger: AAGCCAGCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCATGAGCGAGCTGCGGGACCAGGAGTTTGGCCGCCTAGCAGGAACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | GCTGACATAGGAGGCTGCATCCAGCAGCACAAACCACTTCCCCGGTaGATTCACAGGGCTCCTCCGCCCAGACTTGACCTCCTCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADIGGCIQQHKPLPR*IHRAPPPRLDLLYP Trigger: TGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCACCGGGGAAGTGGTTTGTGCTGCTGGATGCAGCCTCCTATGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | CTCCCCCGACTCTCGGAGAGCGTCTGGAAGACGTCCTGGTTCCGCTaGCCGGTTTGCTGGTTGATACAAATCATCTGGCACCTGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPRLSESVWKTSWFR*PVCWLIQIIWHLWQ Trigger: TTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGAGAGTCGGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | CTGCAGCCACCTTCCTCATTCCCACCACAGAGGTGTGGTTGTCAGTaGGGTAGCAGAAGTGACTCCCACTGTTCTCTGGGCTCCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LQPPSSFPPQRCGCQ*GSRSDSHCSLGSGT Trigger: TGTCCCGGAGCCCAGAGAACAGTGGGAGTCACTTCTGCTACCTCACTGACAACCACACCTCTGTGGTGGGAATGAGGAAGGTGGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | CTCTCGGAGAGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTaGTGGTTGATACAAATCATCTGGCACCTGTGGCAAGGCCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSESVWKTSWFRCPV*WLIQIIWHLWQGPR Trigger: TCTAGGGCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | TCGGAGAGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTaGTTGATACAAATCATCTGGCACCTGTGGCAAGGCCCTAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SESVWKTSWFRCPVC*LIQIIWHLWQGPRT Trigger: GGTTCTAGGGCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | CAAACCACTTCCCCGGTGCATTCACAGGGCTCCTCCGCCCAGACTTaGCCTCCTCTACCCATGACAATGGGTATCTGGTGCCCGAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTTSPVHSQGSSAQT*PPLPMTMGIWCPKS Trigger: ACTTTTCGGGCACCAGATACCCATTGTCATGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCACCGGGGAAGTGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | AGAGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTGGTTaGTACAAATCATCTGGCACCTGTGGCAAGGCCCTAGAACCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RASGRRPGSAARFAG*YKSSGTCGKALEPG Trigger: TCCAGGTTCTAGGGCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | TTCACCTTTCTCCCCCGACTCTCGGAGAGCGTCTGGAAGACGTCCTaGTTCCGCTGCCCGGTTTGCTGGTTGATACAAATCATCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: FTFLPRLSESVWKTS*FRCPVCWLIQIIWH Trigger: GTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGAGAGTCGGGGGAGAAAGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | AAGCTGACAGTCGGGGTCACAGGCTCCAGCATCCTTTCCCTCCGCTaGCCACATGTCCTCTGGCTTGACTGGGATAGATGTGACACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLTVGVTGSSILSLR*PHVLWLDWDRCDTH Trigger: ATGAGTGTCACATCTATCCCAGTCAAGCCAGAGGACATGTGGTCAGCGGAGGGAAAGGATGCTGGAGCCTGTGACCCCGACTGTCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | TCTGGTGCCCGAAAAGTTACTCTGAGCTGGGTAACAGAAGAGGTGTaGAAGCTGACAGTCGGGGTCACAGGCTCCAGCATCCTTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGARKVTLSWVTEEV*KLTVGVTGSSILSL Trigger: GAGGGAAAGGATGCTGGAGCCTGTGACCCCGACTGTCAGCTTCCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTTTCGGGCACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | TACACACCAAAGTTCACCTTTCTCCCCCGACTCTCGGAGAGCGTCTaGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTGGTTGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: YTPKFTFLPRLSESV*KTSWFRCPVCWLIQ Trigger: TTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGAGAGTCGGGGGAGAAAGGTGAACTTTGGTGTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | TGCATTCACAGGGCTCCTCCGCCCAGACTTGACCTCCTCTACCCATaGCAATGGGTATCTGGTGCCCGAAAAGTTACTCTGAGCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CIHRAPPPRLDLLYP*QWVSGARKVTLSWV Trigger: TACCCAGCTCAGAGTAACTTTTCGGGCACCAGATACCCATTGTCATGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | CTCCTCCGAAGTAGCCTTTCCTCAAGAGAGGAGCCACGTGCTTATTaGCTAGCAGAGCACCCAGGCCTGTGGGGAGCCCAAAGATCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRSSLSSREEPRAY*LAEHPGLWGAQRSY Trigger: ATAAGATCTTTGGGCTCCCCACAGGCCTGGGTGCTCTGCTAGTCAATAAGCACGTGGCTCCTCTCTTGAGGAAAGGCTACTTCGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | CTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGGTCATACAGCAGCCCTaGGCTCCCCACAGGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLGEEMLGDNTWVFLGRGVIQQP*APHRPL Trigger: AAGTGGCCTGTGGGGAGCCAAGGGCTGCTGTATGAC...CCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | GATCCTCTGCTGCAGGTCAATGAAGGGCTGGATCAGGCAGAGCCGTaGCTCCTGCTTCTGACTCATGCAAATGCCATTGTGATTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: DPLLQVNEGLDQAEP*LLLLTHANAIVIHN Trigger: GTTGTGAATCACAATGGCATTTGCATGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATCCAGCCCTTCATTGACCTGCAGCAGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | ATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGCTCCTCCGCCCAGACTaGACCTCCTCTACCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: MLLGEEMLGDNTWVFLGRLLRPD*TSSTHD Trigger: GTCATGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAG...CCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | AAAGATCTTATAGAAGGAGATGGGGATGAAGTCAGCCTGGTGAGCTaGCAGATCCAAGGGGGAAGTGCTGACATAGGAGGCTGCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDLIEGDGDEVSLVS*QIQGGSADIGGCIQ Trigger: CTGGATGCAGCCTCCTATGTCAGCACTTCCCCCTTGGATCTGTCAGCTCACCAGGCTGACTTCATCCCCATCTCCTTCTATAAGATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | ATGTTCACCATGCCGCCTGTGAGGTGCTCCAGAGCATCAAATCCATaGTTCAGCGCTATTACATCGAGGAATGAGATGGTGCCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: MFTMPPVRCSRASNP*FSAITSRNEMVPSS Trigger: CGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGATTTGATGCTCTGGAGCACCTCACAGGCGGCATGGTGAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 90 bp | GAGCATCAAATCCATGCTTCAGCGCTATTACATCGAGGAATGAGATaGTGCCATCTTCGAACCTTTCTGCCACCGATGACCTTGGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: EHQIHASALLHRGMR*CHLRTFLPPMTLGR Trigger: ACGTCCCAAGGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGATTTGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | GCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTCCTCAGGTGGATGTaGTACAGGCTAGCCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGRRNVRRQHLGVSGKGVLRWM*YRLAIL Trigger: CAAAATGGCTAGCCTGTACAACATCCACCTGAGGAC...CCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | CTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGAAGGGGGTCCATCCCTTCTGCTTaGATGACCATGATCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGEEMLGDNTWVFLGRGSIPSA*MTMILC Trigger: GCAGAGGATCATGGTCATCAAAGCAGAAGGGATGGA...CCCCCTTCCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGGGAGCCACGTGCTTATaGACTAGCAGAGCACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FNALGRRNVRRQHLGVSGGATCL*TSRAPR Trigger: CCTGGGTGCTCTGCTAGTCAATAAGCACGTGGCTCC...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGCTCCCCACAGGCCACTaGGTCACCTCAAACGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLMLLGEEMLGDNTWVFLLPTGH*VTSNAA Trigger: TGCTGCGTTTGAGGTGACCAAGTGGCCTGTGGGGAG...CAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 90 bp | CATCAAATCCATGCTTCAGCGCTATTACATCGAGGAATGAGATGGTaGCATCTTCGAACCTTTCTGCCACCGATGACCTTGGGACGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HQIHASALLHRGMRW*HLRTFLPPMTLGRK Trigger: TTTACGTCCCAAGGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGATTTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | AACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTTCCTGCAGCTTTGTCTaGAGGGGTCTGCTGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NFNALGRRNVRRQHLGVSSCSFV*RGLLGA Trigger: AGCGCCCAGCAGACCCCTCAAGACAAAGCTGCAGGA...AGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | AGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGGTGTCGTGGGTGAGTTaGCTGGTGATGTTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RETLMLLGEEMLGDNTWVVSWVS*LVMFWL Trigger: CAGCCAGAACATCACCAGCAAACTCACCCACGACAC...CACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGCACATGTCCTCTGGCTaGACTGGGATAGATGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FNALGRRNVRRQHLGVSGHMSSG*TGIDVT Trigger: TGTCACATCTATCCCAGTCAAGCCAGAGGACATGTG...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | ACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGAAGGCTCTGGCTCCCTaGGTAATAATATTGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: TLMLLGEEMLGDNTWVFLKALAP*VIILAR Trigger: CCGTGCCAATATTATTACCAAGGGAGCCAGAGCCTT...CAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | AAGAGAAACTTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTTGCCCGGTTTGCTGGTaGATACAAATCATCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KRNFNALGRRNVRRQHLGCPVCW*IQIIWH Trigger: GTGCCAGATGATTTGTATCAACCAGCAAACCGGGCA...ACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAAGTTTCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 90 bp | GTCTTCCTGGCATTTCGCTGGAAGTGTGGACTTTGCTTGATTAAATaGCATAGACGGCCAAGAAACTTTGACAGCCATCTTGAAACATTT | + |
|
Preference number: 5 (lower is better) Translates to: VFLAFRWKCGLCLIK*HRRPRNFDSHLETF Trigger: AAATGTTTCAAGATGGCTGTCAAAGTTTCTTGGCCGTCTATGTCATTTAATCAAGCAAAGTCCACACTTCCAGCGAAATGCCAGGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS-3UTR CAA 90 bp | TTTAATGCTCTTGGGAGAAGAAATGTTAGGAGACAACACTTGGGTGTTTCTGGGTCCAACACATTAAAATaGATGATTGGACCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FNALGRRNVRRQHLGVSGSNTLK*MIGPWT Trigger: TGTCCAGGGTCCAATCATCAATTTTAATGTGTTGGA...CCCAGAAACACCCAAGTGTTGTCTCCTAACATTTCTTCTCCCAAGAGCATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | TGCTGCGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTaGTGGCTTCCAGATGGCGCTGGAAGGCCGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CCASRSRGPSAV*WLPDGAGRPGA Trigger: AGCCCCCGGCCTTCCAGCGCCATCTGGAAGCCAGCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | GGCGGCCAAACTCCTGGTCCCGCAGCTCGCTCATGCTaGGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GGQTPGPAARSC*ASRSRGPSAVC Trigger: GCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCATGAGCGAGCTGCGGGACCAGGAGTTTGGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | TGCGCAAGCCGTAGCCGTGGGCCAAGCGCTGTGTGCTaGCTTCCAGATGGCGCTGGAAGGCCGGGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CASRSRGPSAVC*LPDGAGRPGAQ Trigger: CTGAGCCCCCGGCCTTCCAGCGCCATCTGGAAGCCAGCACACAGCGCTTGGCCCACGGCTACGGCTTGCGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | CTAGGCGGCCAAACTCCTGGTCCCGCAGCTCGCTCATaGTGCGCAAGCCGTAGCCGTGGGCCAAGCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LGGQTPGPAARS*CASRSRGPSAV Trigger: CACAGCGCTTGGCCCACGGCTACGGCTTGCGCAGCATGAGCGAGCTGCGGGACCAGGAGTTTGGCCGCCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | GGAGGCTGCATCCAGCAGCACAAACCACTTCCCCGGTaGATTCACAGGGCTCCTCCGCCCAGACTTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: GGCIQQHKPLPR*IHRAPPPRLDL Trigger: GAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCACCGGGGAAGTGGTTTGTGCTGCTGGATGCAGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | CCCGGGTCCCCATTCAGGATTCCTGCAGCTTTGTCTTaGGGGGTCTGCTGGGCGCTGCTGGCTTTGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PGSPFRIPAALS*GVCWALLALLR Trigger: TCTGAGCAAAGCCAGCAGCGCCCAGCAGACCCCTCAAGACAAAGCTGCAGGAATCCTGAATGGGGACCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | GTCAGTGAGGTAGCAGAAGTGACTCCCACTGTTCTCTaGGCTCCGGGACACCCACGGAAACGCCTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VSEVAEVTPTVL*APGHPRKRLCH Trigger: GTGGCAGAGGCGTTTCCGTGGGTGTCCCGGAGCCCAGAGAACAGTGGGAGTCACTTCTGCTACCTCACTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | GCCATTGTGATTCACAACCATCCAGCTCCGGTCATACAGCAGCCCTaGGCTCCCCACAGGCCACTTGGTCACCTCAAACGCAGCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: AIVIHNHPAPVIQQP*APHRPLGHLKRSTG Trigger: TCCTGTGCTGCGTTTGAGGTGACCAAGTGGCCTGTGGGGAGCCAAGGGCTGCTGTATGACCGGAGCTGGATGGTTGTGAATCACAATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | GAGAGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTGGTaGATACAAATCATCTGGCACCTGTGGCAAGGCCCTAGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ESVWKTSWFRCPVCW*IQIIWHLWQGPRTW Trigger: CCAGGTTCTAGGGCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | GTCGGGGTCACAGGCTCCAGCATCCTTTCCCTCCGCTaGCCACATGTCCTCTGGCTTGACTGGGATAGATGT | + |
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Preference number: 6 (lower is better) Translates to: VGVTGSSILSLR*PHVLWLDWDRC Trigger: ACATCTATCCCAGTCAAGCCAGAGGACATGTGGTCAGCGGAGGGAAAGGATGCTGGAGCCTGTGACCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | TTCACAACCATCCAGCTCCGGTCATACAGCAGCCCTTaGCTCCCCACAGGCCACTTGGTCACCTCAAACGCA | + |
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Preference number: 6 (lower is better) Translates to: FTTIQLRSYSSP*LPTGHLVTSNA Trigger: TGCGTTTGAGGTGACCAAGTGGCCTGTGGGGAGCCAAGGGCTGCTGTATGACCGGAGCTGGATGGTTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | TTCCCCGGTGCATTCACAGGGCTCCTCCGCCCAGACTaGACCTCCTCTACCCATGACAATGGGTATCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPGAFTGLLRPD*TSSTHDNGYLV Trigger: CACCAGATACCCATTGTCATGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCACCGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | ACAAACCACTTCCCCGGTGCATTCACAGGGCTCCTCCGCCCAGACTaGACCTCCTCTACCCATGACAATGGGTATCTGGTGCCCGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TNHFPGAFTGLLRPD*TSSTHDNGYLVPEK Trigger: CTTTTCGGGCACCAGATACCCATTGTCATGGGTAGAGGAGGTCAAGTCTGGGCGGAGGAGCCCTGTGAATGCACCGGGGAAGTGGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | CAGCCTGGTGAGCTGACAGATCCAAGGGGGAAGTGCTaGCATAGGAGGCTGCATCCAGCAGCACAAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: QPGELTDPRGKC*HRRLHPAAQTT Trigger: AGTGGTTTGTGCTGCTGGATGCAGCCTCCTATGTCAGCACTTCCCCCTTGGATCTGTCAGCTCACCAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | AGTAGCCTTTCCTCAAGAGAGGAGCCACGTGCTTATTaGCTAGCAGAGCACCCAGGCCTGTGGGGAGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSLSSREEPRAY*LAEHPGLWGAQ Trigger: TTGGGCTCCCCACAGGCCTGGGTGCTCTGCTAGTCAATAAGCACGTGGCTCCTCTCTTGAGGAAAGGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | GACAGTCACTCTTCGAGGTTAAGGCCCCAGCATCACTaGTGCTGGCTTGAGGAACAGGCTGGTCACTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSHSSRLRPQHH*CWLEEQAGHWV Trigger: CACCCAGTGACCAGCCTGTTCCTCAAGCCAGCATCAGTGATGCTGGGGCCTTAACCTCGAAGAGTGACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | GGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTGGTTaGTACAAATCATCTGGCACCTGTGGCAAGGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GRRPGSAARFAG*YKSSGTCGKAL Trigger: TAGGGCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | CTCTCGGAGAGCGTCTGGAAGACGTCCTGGTTCCGCTaGCCGGTTTGCTGGTTGATACAAATCATCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSESVWKTSWFR*PVCWLIQIIWH Trigger: GTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTCTCCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | GTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTGCTaGTTGATACAAATCATCTGGCACCTGTGGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VWKTSWFRCPVC*LIQIIWHLWQG Trigger: GCCTTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | GCATCCTTTCCCTCCGCTGACCACATGTCCTCTGGCTaGACTGGGATAGATGTGACACTCATGGCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASFPSADHMSSG*TGIDVTLMAAA Trigger: GGCTGCAGCCATGAGTGTCACATCTATCCCAGTCAAGCCAGAGGACATGTGGTCAGCGGAGGGAAAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | GAGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTaGCTGGTTGATACAAATCATCTGGCACCTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ERLEDVLVPLPG*LVDTNHLAPVA Trigger: TGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | CCTTCCTCATTCCCACCACAGAGGTGTGGTTGTCAGTaGGGTAGCAGAAGTGACTCCCACTGTTCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSFPPQRCGCQ*GSRSDSHCSLG Trigger: GCCCAGAGAACAGTGGGAGTCACTTCTGCTACCTCACTGACAACCACACCTCTGTGGTGGGAATGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | CGAAGGTGTGCTGCTGTATGTTCACCATGCCGCCTGTaGGGTGCTCCAGAGCATCAAATCCATGCTTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRCAAVCSPCRL*GAPEHQIHASA Trigger: CGCTGAAGCATGGATTTGATGCTCTGGAGCACCTCACAGGCGGCATGGTGAACATACAGCAGCACACCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | CTCTGGCTTGACTGGGATAGATGTGACACTCATGGCTaGAGCCACCTTCCTCATTCCCACCACAGAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWLDWDRCDTHG*SHLPHSHHRGV Trigger: CACACCTCTGTGGTGGGAATGAGGAAGGTGGCTGCAGCCATGAGTGTCACATCTATCCCAGTCAAGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | TGGGACGTAAAAGTCCTCTCCTGCAAGGTAGGCAGCTaGAGTCCCTCCTCCGAAGTAGCCTTTCCTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WDVKVLSCKVGS*SPSSEVAFPQE Trigger: CTCTTGAGGAAAGGCTACTTCGGAGGAGGGACTGCAGCTGCCTACCTTGCAGGAGAGGACTTTTACGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | AGCGTCTGGAAGACGTCCTGGTTCCGCTGCCCGGTTTaGTGGTTGATACAAATCATCTGGCACCTGTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SVWKTSWFRCPV*WLIQIIWHLWQ Trigger: TTGCCACAGGTGCCAGATGATTTGTATCAACCAGCAAACCGGGCAGCGGAACCAGGACGTCTTCCAGACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | CTGCAGGTCAATGAAGGGCTGGATCAGGCAGAGCCGTaGCTCCTGCTTCTGACTCATGCAAATGCCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: LQVNEGLDQAEP*LLLLTHANAIV Trigger: CACAATGGCATTTGCATGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATCCAGCCCTTCATTGACCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | GGAATGAGATGGTGCCATCTTCGAACCTTTCTGCCACCGATGACCTaGGGACGTAAAAGTCCTCTCCTGCAAGGTAGGCAGCTGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GMRWCHLRTFLPPMT*GRKSPLLQGRQLQS Trigger: GGACTGCAGCTGCCTACCTTGCAGGAGAGGACTTTTACGTCCCAAGGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | ATAGAAGGAGATGGGGATGAAGTCAGCCTGGTGAGCTaGCAGATCCAAGGGGGAAGTGCTGACATAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IEGDGDEVSLVS*QIQGGSADIGG Trigger: GCCTCCTATGTCAGCACTTCCCCCTTGGATCTGTCAGCTCACCAGGCTGACTTCATCCCCATCTCCTTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | GGATCAGGCAGAGCCGTGGCTCCTGCTTCTGACTCATaGAAATGCCATTGTGATTCACAACCATCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSGRAVAPASDS*KCHCDSQPSSS Trigger: GGAGCTGGATGGTTGTGAATCACAATGGCATTTGCATGAGTCAGAAGCAGGAGCCACGGCTCTGCCTGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | CGAAAAGTTACTCTGAGCTGGGTAACAGAAGAGGTGTaGAAGCTGACAGTCGGGGTCACAGGCTCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RKVTLSWVTEEV*KLTVGVTGSSI Trigger: GATGCTGGAGCCTGTGACCCCGACTGTCAGCTTCCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | TGGTGCCATCTTCGAACCTTTCTGCCACCGATGACCTaGGGACGTAAAAGTCCTCTCCTGCAAGGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WCHLRTFLPPMT*GRKSPLLQGRQ Trigger: CTGCCTACCTTGCAGGAGAGGACTTTTACGTCCCAAGGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | AAATGTTTCTTCACCATCTCGTCACTTAGCCCCAGGTaGCTCTGGCAGGCCCCTAAGTTACAGAAGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KCFFTISSLSPR*LWQAPKLQKQP Trigger: TGGCTGCTTCTGTAACTTAGGGGCCTGCCAGAGGCACCTGGGGCTAAGTGACGAGATGGTGAAGAAACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | CAATGGGTATCTGGTGCCCGAAAAGTTACTCTGAGCTaGGTAACAGAAGAGGTGTGGAAGCTGACAGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QWVSGARKVTLS*VTEEVWKLTVG Trigger: CCCGACTGTCAGCTTCCACACCTCTTCTGTTACCCAGCTCAGAGTAACTTTTCGGGCACCAGATACCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | ATGCCGCCTGTGAGGTGCTCCAGAGCATCAAATCCATaGTTCAGCGCTATTACATCGAGGAATGAGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MPPVRCSRASNP*FSAITSRNEMV Trigger: CACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGATTTGATGCTCTGGAGCACCTCACAGGCGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | CATGCTTCAGCGCTATTACATCGAGGAATGAGATGGTaGCATCTTCGAACCTTTCTGCCACCGATGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HASALLHRGMRW*HLRTFLPPMTL Trigger: CAAGGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | ATCTGGCACCTGTGGCAAGGCCCTAGAACCTGGAAATaGAAGGAGCCAATTGAAATCTCATCCCACTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IWHLWQGPRTWK*KEPIEISSHFS Trigger: AGAGAAGTGGGATGAGATTTCAATTGGCTCCTTGCATTTCCAGGTTCTAGGGCCTTGCCACAGGTGCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CCA 72 bp | ATCCATGCTTCAGCGCTATTACATCGAGGAATGAGATaGTGCCATCTTCGAACCTTTCTGCCACCGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: IHASALLHRGMR*CHLRTFLPPMT Trigger: GGTCATCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | TCATCCCACTTCTCTTCTTCAAAGGCTCTGGCTCCCTaGGTAATAATATTGGCACGGAAGCGGGAGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSHFSSSKALAP*VIILARKREMR Trigger: TCTCATCTCCCGCTTCCGTGCCAATATTATTACCAAGGGAGCCAGAGCCTTTGAAGAAGAGAAGTGGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | TCCCACTTCTCTTCTTCAAAGGCTCTGGCTCCCTTGGTAATAATATaGGCACGGAAGCGGGAGATGAGATCTTTCATGGAGAATGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHFSSSKALAPLVII*ARKREMRSFMENDS Trigger: GGAGTCATTCTCCATGAAAGATCTCATCTCCCGCTTCCGTGCCAATATTATTACCAAGGGAGCCAGAGCCTTTGAAGAAGAGAAGTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | ATCAAATCCATGCTTCAGCGCTATTACATCGAGGAATaGGATGGTGCCATCTTCGAACCTTTCTGCCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: IKSMLQRYYIEE*DGAIFEPFCHR Trigger: TCGGTGGCAGAAAGGTTCGAAGATGGCACCATCTCATTCCTCGATGTAATAGCGCTGAAGCATGGATTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 72 bp | TCTTCTTCAAAGGCTCTGGCTCCCTTGGTAATAATATaGGCACGGAAGCGGGAGATGAGATCTTTCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSKALAPLVII*ARKREMRSFME Trigger: CTCCATGAAAGATCTCATCTCCCGCTTCCGTGCCAATATTATTACCAAGGGAGCCAGAGCCTTTGAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS CAA 90 bp | ATTGAAATCTCATCCCACTTCTCTTCTTCAAAGGCTCTGGCTCCCTaGGTAATAATATTGGCACGGAAGCGGGAGATGAGATCTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: IEISSHFSSSKALAP*VIILARKREMRSFM Trigger: CATGAAAGATCTCATCTCCCGCTTCCGTGCCAATATTATTACCAAGGGAGCCAGAGCCTTTGAAGAAGAGAAGTGGGATGAGATTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | GCATTTCGCTGGAAGTGTGGACTTTGCTTGATTAAATaGCATAGACGGCCAAGAAACTTTGACAGCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: AFRWKCGLCLIK*HRRPRNFDSHL Trigger: AAGATGGCTGTCAAAGTTTCTTGGCCGTCTATGTCATTTAATCAAGCAAAGTCCACACTTCCAGCGAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS TCA 72 bp | TCTTCCTGGCATTTCGCTGGAAGTGTGGACTTTGCTTaGTTAAATGACATAGACGGCCAAGAAACTTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSWHFAGSVDFA*LNDIDGQETLT Trigger: TGTCAAAGTTTCTTGGCCGTCTATGTCATTTAATCAAGCAAAGTCCACACTTCCAGCGAAATGCCAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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| CDS GCA 72 bp | CACAATCATAAGTATTTACCCTGTCAGCACACACTCTaGTTTGACAAATCTGAGTCTGTTCTCCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HNHKYLPCQHTL*FDKSESVLHPP Trigger: AGGAGGATGGAGAACAGACTCAGATTTGTCAAAGCAGAGTGTGTGCTGACAGGGTAAATACTTATGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068006.9 |
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