Pregenerated sensors for MOBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032517Ensembl transcript IDs: ENSMUST00000068698.15, ENSMUST00000093773.8, ENSMUST00000111627.3, ENSMUST00000174193.8, ENSMUST00000214943.2, ENSMUST00000215512.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTAAATTCCCCTGCCTCTGCCTCGGCACTTCCACGGAGCCACAGTaGCCTCGGGAGAGGAAGCCGGGACCCCTCGGCTGCCTTAGGACG | + |
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Preference number: 1 (lower is better) Translates to: VKFPCLCLGTSTEPQ*PRERKPGPLGCLRT Trigger: CGTCCTAAGGCAGCCGAGGGGTCCCGGCTTCCTCTCCCGAGGGCACTGTGGCTCCGTGGAAGTGCCGAGGCAGAGGCAGGGGAATTTAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR TCA 90 bp | CTCACCTCCAGGAAGGCTGCCCTAAGGCTCCCACACCATGGGGACTaGGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: LTSRKAALRLPHHGD*GHLWLLHQQASTPA Trigger: TGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | GCTAGAGTACGACACGAAGAGCCCCCTTCTCACCTCCAGGAAGGCTaGCCTAAGGCTCCCACACCATGGGGACTGAGGGCATCTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: ARVRHEEPPSHLQEG*PKAPTPWGLRASVV Trigger: AACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGGTGAGAAGGGGGCTCTTCGTGTCGTACTCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | ACGGAGCCACAGTGCCCTCGGGAGAGGAAGCCGGGACCCCTCGGCTaGCTTAGGACGATATTTGGCCTGCTTCTTCTTTGCTGTAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: TEPQCPRERKPGPLG*LRTIFGLLLLCCSA Trigger: TGCACTACAGCAAAGAAGAAGCAGGCCAAATATCGTCCTAAGGCAGCCGAGGGGTCCCGGCTTCCTCTCCCGAGGGCACTGTGGCTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR TCA 90 bp | ACATGCTCCAGGAAGGCTGCCCTAAGGCTCCCACACCATGGGGACTaGGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TCSRKAALRLPHHGD*GHLWLLHQQASTPA Trigger: TGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR TCA 90 bp | CCTCCCACCTTCTGCTCGCCCTCCAGAACCTTCCTAACAGGGAGCTaGCAGTCATGGATGGAGCAAAGGGAATGTGGTGTAGACCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: PPTFCSPSRTFLTGS*QSWMEQRECGVDLA Trigger: GGCCAGGTCTACACCACATTCCCTTTGCTCCATCCATGACTGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAGCAGAAGGTGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
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| 3UTR CCA 90 bp | CCATCTCTTCCTCCTGGCTGTCTTCCTCACCCCCTCCGCACACCTTaGACAGTTTCCACTAACATGGCCCCCATCCGTGCACTTGATCTG | + |
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Preference number: 1 (lower is better) Translates to: PSLPPGCLPHPLRTP*TVSTNMAPIRALDL Trigger: CAGATCAAGTGCACGGATGGGGGCCATGTTAGTGGAAACTGTCCAAGGTGTGCGGAGGGGGTGAGGAAGACAGCCAGGAGGAAGAGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR GCA 90 bp | CTTTCTAGACCTATACAAGTGCGCATGGGGACTTGTCCAGGATGCTaGGAGGGAAGTGATTGGGAGGGTTGGGGGACAGGGCTGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSRPIQVRMGTCPGC*EGSDWEGWGTGLKP Trigger: TGGCTTCAGCCCTGTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCATCCTGGACAAGTCCCCATGCGCACTTGTATAGGTCTAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | AGTGTACAGATGGGTACAAGCAAGTGCCACGCCATGGGGGAGGGCTaGCTCCTGTGGTCTAGAACAAAAAGAGCCCATGCTCGGGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SVQMGTSKCHAMGEG*LLWSRTKRAHARAH Trigger: ATGAGCCCGAGCATGGGCTCTTTTTGTTCTAGACCACAGGAGCCAGCCCTCCCCCATGGCGTGGCACTTGCTTGTACCCATCTGTACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR TCA 90 bp | TGGGAGGGTTGGGGGACAGGGCTGAAGCCATATGACCTTCCTAAATaGTATCATTTGAAAGCAGTCAGAGCTGCGCCGGGCGCCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: WEGWGTGLKPYDLPK*YHLKAVRAAPGACA Trigger: TGCACAGGCGCCCGGCGCAGCTCTGACTGCTTTCAAATGATATCATTTAGGAAGGTCATATGGCTTCAGCCCTGTCCCCCAACCCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR TCA 90 bp | CCTTTTCATGACGACCTCCTGCAGTTCATGACGACCTCCTGCAGTTaGGGCCTTTGGGGGACAAGAATGAACCTGGGACTTGGAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: PFHDDLLQFMTTSCS*GLWGTRMNLGLGRA Trigger: GGCCCTTCCAAGTCCCAGGTTCATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCGTCATGAACTGCAGGAGGTCGTCATGAAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | ACTCTTTCTAGACCTATACAAGTGCGCATGGGGACTTGTCCAGGATaGTGCGAGGGAAGTGATTGGGAGGGTTGGGGGACAGGGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: TLSRPIQVRMGTCPG*CEGSDWEGWGTGLK Trigger: CTTCAGCCCTGTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCATCCTGGACAAGTCCCCATGCGCACTTGTATAGGTCTAGAAAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | CCAATCTCTGTCCCCACAGCAAGTGTACAGATGGGTACAAGCAAGTaGCACGCCATGGGGGAGGGCTGGCTCCTGTGGTCTAGAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: PISVPTASVQMGTSK*HAMGEGWLLWSRTK Trigger: TTTTGTTCTAGACCACAGGAGCCAGCCCTCCCCCATGGCGTGGCACTTGCTTGTACCCATCTGTACACTTGCTGTGGGGACAGAGATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | CCATCTGGGCTGACTAGGGAAAAGAGGCCCAAGCCGATCACCATGTaGCCCCTGCTGAGAAGGCTTTGGGACTCTGAAGTGTTGCATGTA | + |
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Preference number: 1 (lower is better) Translates to: PSGLTREKRPKPITM*PLLRRLWDSEVLHV Trigger: TACATGCAACACTTCAGAGTCCCAAAGCCTTCTCAGCAGGGGGCACATGGTGATCGGCTTGGGCCTCTTTTCCCTAGTCAGCCCAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | AGAAAGGGGCTCCAGATGAAACCAAAAGACCCGTTCCCTGAGCTCTaGAGCACAAGAGATCCTTCCAGGACTCCGTGGCTAGAGTACGAC | + |
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Preference number: 1 (lower is better) Translates to: RKGLQMKPKDPFPEL*STRDPSRTPWLEYD Trigger: GTCGTACTCTAGCCACGGAGTCCTGGAAGGATCTCTTGTGCTCCAGAGCTCAGGGAACGGGTCTTTTGGTTTCATCTGGAGCCCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | ATTCCATGGCCCTTCACCAGACTCGACTCTGGCTCTGAGTACTGCTaGCTAAGAGGTGAATGGGAAGCAAATGGTGTGCGAGCAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: IPWPFTRLDSGSEYC*LRGEWEANGVRARE Trigger: CTCTCTTGCTCGCACACCATTTGCTTCCCATTCACCTCTTAGCCAGCAGTACTCAGAGCCAGAGTCGAGTCTGGTGAAGGGCCATGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | CTGCTGAGAAGGCTTTGGGACTCTGAAGTGTTGCATGTACCGTTGTaGCCTTTTCATGACGACCTCCTGCAGTTCATGACGACCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLRRLWDSEVLHVPL*PFHDDLLQFMTTSC Trigger: GCAGGAGGTCGTCATGAACTGCAGGAGGTCGTCATGAAAAGGCCACAACGGTACATGCAACACTTCAGAGTCCCAAAGCCTTCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR TCA 90 bp | GGGGCTCCCATGGGCATAAACACCCTGAGCATGGCAGTACTGGAGTaGTTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAG | + |
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Preference number: 1 (lower is better) Translates to: GAPMGINTLSMAVLE*LQYIRASLSLFGTQ Trigger: CTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAATCACTCCAGTACTGCCATGCTCAGGGTGTTTATGCCCATGGGAGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| 3UTR TCA 90 bp | TGGGACTTGGAAGGGCCTCTAGCATTTGCACTTGGGCAAGAAAACTaGGAGCTGGCACATATTCTCCCCAAGCTACTCCCAAGGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: WDLEGPLAFALGQEN*ELAHILPKLLPRPT Trigger: TGTTGGCCTTGGGAGTAGCTTGGGGAGAATATGTGCCAGCTCTCAGTTTTCTTGCCCAAGTGCAAATGCTAGAGGCCCTTCCAAGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR GCA 90 bp | ACAATTCCATGGCCCTTCACCAGACTCGACTCTGGCTCTGAGTACTaGTGGCTAAGAGGTGAATGGGAAGCAAATGGTGTGCGAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: TIPWPFTRLDSGSEY*WLRGEWEANGVRAR Trigger: TCTTGCTCGCACACCATTTGCTTCCCATTCACCTCTTAGCCAGCAGTACTCAGAGCCAGAGTCGAGTCTGGTGAAGGGCCATGGAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | ACTCCTGCATCATACTTGAGGTCAGATAATTCGTCTGAGAGCAGATaGGTTGCGGGAAGCAGTGAGTCCACAGGCAGAGGCTGTCCATTC | + |
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Preference number: 1 (lower is better) Translates to: TPASYLRSDNSSESR*VAGSSESTGRGCPF Trigger: GAATGGACAGCCTCTGCCTGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGCAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| 3UTR TCA 90 bp | CCGGCTCCCAGCACAAGGCCATCTGATGTTCTTATCGCCCTACACTaGGTTTTCGCCACCGTAATACTGTCTGTTTTACATCCCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: PAPSTRPSDVLIALH*VFATVILSVLHPST Trigger: TGTGGAGGGATGTAAAACAGACAGTATTACGGTGGCGAAAACTCAGTGTAGGGCGATAAGAACATCAGATGGCCTTGTGCTGGGAGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR TCA 90 bp | ATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTaGGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: ICGCYISRRPLLHHT*GQIIRLRADGLREA Trigger: TGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| 3UTR CCA 90 bp | CTGGTACTCTCTTGTTTCCTTTTTCCCCATTTCCATGTGGATGTGTaGTGTGTGGTGTGGTGTGGTGTGGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LVLSCFLFPHFHVDV*CVVWCGVVCVCVCV Trigger: CACACACACACACACACACACCACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAAACAAGAGAGTACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | ACAAGAATGAACCTGGGACTTGGAAGGGCCTCTAGCATTTGCACTTaGGCAAGAAAACTGAGAGCTGGCACATATTCTCCCCAAGCTACT | + |
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Preference number: 1 (lower is better) Translates to: TRMNLGLGRASSICT*ARKLRAGTYSPQAT Trigger: AGTAGCTTGGGGAGAATATGTGCCAGCTCTCAGTTTTCTTGCCCAAGTGCAAATGCTAGAGGCCCTTCCAAGTCCCAGGTTCATTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | GCCTCCATTTCCTCTGTTTCTGACACAAGTTACCTACAGTTCACATaGGAATTTAGCGCGATCCCCTACTTATCGGAACATCGCCGCATT | + |
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Preference number: 1 (lower is better) Translates to: ASISSVSDTSYLQFT*EFSAIPYLSEHRRI Trigger: AATGCGGCGATGTTCCGATAAGTAGGGGATCGCGCTAAATTCCCATGTGAACTGTAGGTAACTTGTGTCAGAAACAGAGGAAATGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CCA 90 bp | ATGAAAAAGCATAAAGTCTCCTTAATGGATTGGATGAAGCTAGCCTaGAAATTTGTCTCACCAATGGGCTACTGTGTGCTCCTAACCCGT | + |
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Preference number: 1 (lower is better) Translates to: MKKHKVSLMDWMKLA*KFVSPMGYCVLLTR Trigger: ACGGGTTAGGAGCACACAGTAGCCCATTGGTGAGACAAATTTCCAGGCTAGCTTCATCCAATCCATTAAGGAGACTTTATGCTTTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGTGTACAGATGGGTACAAGCAAGTGCCACGCCATGGGGGAGGGCTGGCCACCTCCAGGAAGGCTaGCCTAAGGCTCCCACACCA | + |
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Preference number: 2 (lower is better) Translates to: QQVYRWVQASATPWGRAGHLQEG*PKAPTP Trigger: TGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGGTG...GCCAGCCCTCCCCCATGGCGTGGCACTTGCTTGTACCCATCTGTACACTTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGACTGGGCCCGCGGAGGGGGAGGAAGGAGGATGCCTCCATTTCCTCTGTCCGTTCCCTGAGCTCTaGAGCACAAGAGATCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LETGPAEGEEGGCLHFLCPFPEL*STRDPS Trigger: GGAAGGATCTCTTGTGCTCCAGAGCTCAGGGAACGG...ACAGAGGAAATGGAGGCATCCTCCTTCCTCCCCCTCCGCGGGCCCAGTCTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCGCACGCGCAAACACACACACGCACACACACACGCACTTTGCCTTCCTTTCGGGCGCCTGTGCAGGTaGCAAGCTCAAAGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TRTRKHTHAHTHALCLPFGRLCR*QAQRQG Trigger: GCCTTGCCTTTGAGCTTGTCACCTGCACAGGCGCCC...GAAAGGAAGGCAAAGTGCGTGTGTGTGTGCGTGTGTGTGTTTGCGCGTGCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCTTGTGAATAGAGACATGGCCTCCTTCCCGTCCACTGGCCTCCTAAGGGGTTGCGGGAAGCAGTaGGTCCACAGGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GFLVNRDMASFPSTGLLRGCGKQ*VHRQRL Trigger: CAGCCTCTGCCTGTGGACTCACTGCTTCCCGCAACC...CCTTAGGAGGCCAGTGGACGGGAAGGAGGCCATGTCTCTATTCACAAGGAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGGTTTCCTTGTGAATAGAGACATGGCCTCCTTCCCGTCCACTGGCCTCACTCCACCTCCACAGTaGGCACAGACCCCTTCATCC | + |
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Preference number: 2 (lower is better) Translates to: EPGFLVNRDMASFPSTGLTPPPQ*AQTPSS Trigger: GGATGAAGGGGTCTGTGCTCACTGTGGAGGTGGAGT...GAGGCCAGTGGACGGGAAGGAGGCCATGTCTCTATTCACAAGGAAACCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTGAGGGTTGCGGGAAGCAGTaGGTCCACAGGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RASVVVTSAGVHSCIILEGCGKQ*VHRQRL Trigger: CAGCCTCTGCCTGTGGACTCACTGCTTCCCGCAACC...CTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTGCCTCGGCACTTCCACGGAGCCACAGTGCCCTCGGGAGAGGAAGCCGGAGTTTTCTCCAGGATaGATTCCTAAAATTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CLCLGTSTEPQCPRERKPEFSPG*IPKIAV Trigger: GACTGCAATTTTAGGAATCCATCCTGGAGAAAACTC...CGGCTTCCTCTCCCGAGGGCACTGTGGCTCCGTGGAAGTGCCGAGGCAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGTGTGGTGTGGTGTGTCTCAAAGCCCTGTGTaGGGCTGGAGACTGGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: FLFPHFHVDVWCVVWCGVSQSPV*GWRLGP Trigger: CGGGCCCAGTCTCCAGCCTCACACAGGGCTTTGAGA...CACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | GGATGTCAATATTCAGGCCCAGAACGTCATACTGCATTTACTGCCCGGTACTTGGGTTGCGGGAAGCAGTaGGTCCACAGGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GCQYSGPERHTAFTARYLGCGKQ*VHRQRL Trigger: CAGCCTCTGCCTGTGGACTCACTGCTTCCCGCAACC...CAAGTACCGGGCAGTAAATGCAGTATGACGTTCTGGGCCTGAATATTGACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTTGGGACTCTGAAGTGTTGCATGTACCGTTGTGGCCTTTTCATGACGACATGCTGCGAGGGAAGTaGTTGGGAGGGTTGGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RLWDSEVLHVPLWPFHDDMLRGK*LGGLGD Trigger: GTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCAT...GTCGTCATGAAAAGGCCACAACGGTACATGCAACACTTCAGAGTCCCAAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGTGTGGTGTGGTGTGCCATGTGCCCCCTGCTaGGAAGGCTTTGGGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLFPHFHVDVWCVVWCGVPCAPC*EGFGTL Trigger: CAGAGTCCCAAAGCCTTCTCAGCAGGGGGCACATGG...CACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CAA 90 bp | ATCACCATGTGCCCCCTGCTGAGAAGGCTTTGGGACTCTGAAGTGTaGCATGTACCGTTGTGGCCTTTTCATGACGACCTCCTGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ITMCPLLRRLWDSEV*HVPLWPFHDDLLQF Trigger: GAACTGCAGGAGGTCGTCATGAAAAGGCCACAACGGTACATGCAACACTTCAGAGTCCCAAAGCCTTCTCAGCAGGGGGCACATGGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR CAA 90 bp | GCCACTCTTGCTTGCTCTGGGATCTCCTGTCACCAGCTTCTCAGTTaGGATTTAGAGGTACGTTGTCAGGCCTACCCAGCATTCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ATLACSGISCHQLLS*DLEVRCQAYPAFVW Trigger: CCACACGAATGCTGGGTAGGCCTGACAACGTACCTCTAAATCCAAACTGAGAAGCTGGTGACAGGAGATCCCAGAGCAAGCAAGAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGTGTGGTGTGGTGTGGTCCACACCATGGGGACTaGGGGCATCTGTGGTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: PFSPFPCGCVVCGVVWCGPHHGD*GHLWLL Trigger: TAACAACCACAGATGCCCTCAGTCCCCATGGTGTGG...ACCACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGCCCAATCTCTGTCCCCACAGCAAGTGTACAGATGGGTACAAGCAAGTGACTCGACTCTGGCTCTaGGTACTGCTGGCTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: IWPNLCPHSKCTDGYKQVTRLWL*VLLAKR Trigger: CCTCTTAGCCAGCAGTACTCAGAGCCAGAGTCGAGT...CACTTGCTTGTACCCATCTGTACACTTGCTGTGGGGACAGAGATTGGGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGTCAGGCCCTGAGCCTGGTTTCCTTGTGAATAGAGACATGGCCTCCTTCTTTGGGGGACAAGAATaGACCTGGGACTTGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TESGPEPGFLVNRDMASFFGGQE*TWDLEG Trigger: CCCTTCCAAGTCCCAGGTTCATTCTTGTCCCCCAAA...GAAGGAGGCCATGTCTCTATTCACAAGGAAACCAGGCTCAGGGCCTGACTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAATCTTCAGCCTGAAGAACCCGAATCCTCGGAGAGTCGAGACAGTTGACCCACACCATGGGGACTaGGGGCATCTGTGGTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: TRIFSLKNPNPRRVETVDPHHGD*GHLWLL Trigger: TAACAACCACAGATGCCCTCAGTCCCCATGGTGTGG...GTCAACTGTCTCGACTCTCCGAGGATTCGGGTTCTTCAGGCTGAAGATTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCGGAGACAAACGAGCACTCAGGATAGGCTTTGCTTTGCCAAAATGAAAACAGTGAGGACGCCATGGTaGCCTTTGGGGTCTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GRRQTSTQDRLCFAKMKTVRTPW*PLGSSS Trigger: GCTTGAAGACCCCAAAGGTCACCATGGCGTCCTCAC...TGTTTTCATTTTGGCAAAGCAAAGCCTATCCTGAGTGCTCGTTTGTCTCCGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| 3UTR CAA 90 bp | CATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTaGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HLWLLHQQASTPASY*RSDNSSESRWVAGS Trigger: GCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTACTCTCTTGTTTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGGCGTGCGTGCGTGCGTaGGTGTGTGTGGTATATGTG | + |
|
Preference number: 2 (lower is better) Translates to: WYSLVSFFPISMWMCGVWACVRA*VCVVYV Trigger: CACATATACCACACACACGCACGCACGCACGCACGC...CCACACACCACACATCCACATGGAAATGGGGAAAAAGGAAACAAGAGAGTACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCTGCAGTTCATGACGACCTCCTGCAGTTGAGGCCTTTGGGGGACAAGAATAAGGAGGAATGTGTGTaGATTAGCTCTGCAATCACC | + |
|
Preference number: 2 (lower is better) Translates to: PPAVHDDLLQLRPLGDKNKEECV*ISSAIT Trigger: GGTGATTGCAGAGCTAATCCACACACATTCCTCCTT...ATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCGTCATGAACTGCAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGAGCTGGCACATATTCTCCCCAAGCTACTCCCAAGGCCAACACCCACACACTAAATGATATCATTTaGAAGCAGTCAGAGCTGCGC | + |
|
Preference number: 2 (lower is better) Translates to: LRAGTYSPQATPKANTHTLNDII*KQSELR Trigger: GCGCAGCTCTGACTGCTTTCAAATGATATCATTTAG...TGTGTGGGTGTTGGCCTTGGGAGTAGCTTGGGGAGAATATGTGCCAGCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CAA 90 bp | GCTAGGATGCACCCATCCTCGAAGAACCATGAGTCTGGTACTCTCTaGTTTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ARMHPSSKNHESGTL*FPFSPFPCGCVVCG Trigger: ACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAAACAAGAGAGTACCAGACTCATGGTTCTTCGAGGATGGGTGCATCCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CAA 90 bp | CTCCCATCGGTAGCTGCTAGGATTTTTCTCACGTCACCGCCAACCTaGACAATTTCTCTTTTGCATTTGCGGTTTGCATGGTTGTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: LPSVAARIFLTSPPT*TISLLHLRFAWLCT Trigger: GGTGCACAACCATGCAAACCGCAAATGCAAAAGAGAAATTGTCAAGGTTGGCGGTGACGTGAGAAAAATCCTAGCAGCTACCGATGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCAAACAAATATATGCCCTGCCAGTACTGTTAAGCCGTTTCTATGTAGCTATGCTCCAGGAAGGCTaGCCTAAGGCTCCCACACCA | + |
|
Preference number: 2 (lower is better) Translates to: LSKQIYALPVLLSRFYVAMLQEG*PKAPTP Trigger: TGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGCAT...AGCTACATAGAAACGGCTTAACAGTACTGGCAGGGCATATATTTGTTTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGTTTGCTCACTCCAACCTAATTTTCTCTGTGAAGCCTCAGGTTCCCACTGGAAAGTTCCCAGTTaGGGCTCCCATGGGCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPVCSLQPNFLCEASGSHWKVPS*GSHGHK Trigger: TTTATGCCCATGGGAGCCCCAACTGGGAACTTTCCA...GTGGGAACCTGAGGCTTCACAGAGAAAATTAGGTTGGAGTGAGCAAACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGCCCAATCTCTGTCCCCACAGCAAGTGTACAGATGGGTACAAGCAAGTGTATCTTACAATTCCATaGCCCTTCACCAGACTCGAC | + |
|
Preference number: 2 (lower is better) Translates to: IWPNLCPHSKCTDGYKQVYLTIP*PFTRLD Trigger: GTCGAGTCTGGTGAAGGGCCATGGAATTGTAAGATA...CACTTGCTTGTACCCATCTGTACACTTGCTGTGGGGACAGAGATTGGGCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CAA 90 bp | AAGCACTGGAGCATCAGGCCTCTCAGGAATTTGAGGGGTTTTGATTaGGAGACAGAAACGCTCCTGGCACTCTTTCTAGACCTATACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KHWSIRPLRNLRGFD*ETETLLALFLDLYK Trigger: CTTGTATAGGTCTAGAAAGAGTGCCAGGAGCGTTTCTGTCTCCAAATCAAAACCCCTCAAATTCCTGAGAGGCCTGATGCTCCAGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGTCAGGCCCTGAGCCTGGTTTCCTTGTGAATAGAGACATGGCCTCCTTCCATTTCCTCTGTTTCTaGCACAAGTTACCTACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TESGPEPGFLVNRDMASFHFLCF*HKLPTV Trigger: AACTGTAGGTAACTTGTGTCAGAAACAGAGGAAATG...GAAGGAGGCCATGTCTCTATTCACAAGGAAACCAGGCTCAGGGCCTGACTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGAAACATCCCTGGGCACTCACTGGAACCTGGTCCTCAGAAAGGTGGTCATTTCTCTTTTGCATTTaGGGTTTGCATGGTTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RRKHPWALTGTWSSERWSFLFCI*GLHGCA Trigger: TGCACAACCATGCAAACCGCAAATGCAAAAGAGAAA...TGACCACCTTTCTGAGGACCAGGTTCCAGTGAGTGCCCAGGGATGTTTCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CAA 90 bp | TCTTTTGCATTTGCGGTTTGCATGGTTGTGCACCATGACCTTGTTTaGCACATCCGAGAAGACACAAGAATCTTCAGCCTGAAGAACCCG | + |
|
Preference number: 2 (lower is better) Translates to: SFAFAVCMVVHHDLV*HIREDTRIFSLKNP Trigger: CGGGTTCTTCAGGCTGAAGATTCTTGTGTCTTCTCGGATGTGCAAAACAAGGTCATGGTGCACAACCATGCAAACCGCAAATGCAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCGGAGACAAACGAGCACTCAGGATAGGCTTTGCTTTGCCAAAATGAAAACACTAGATTTACCTACATaGCATGGTCTATCTGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GRRQTSTQDRLCFAKMKTLDLPT*HGLSDR Trigger: TCTGTCAGATAGACCATGTCATGTAGGTAAATCTAG...TGTTTTCATTTTGGCAAAGCAAAGCCTATCCTGAGTGCTCGTTTGTCTCCGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTGTTGTCCTTTCCTACCTACCTGGTCTTTAAAGGAAAATTCGAGAGCTGTCCCAGAACGTCATACTaGATTTACTGCCCGGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: ILLSFPTYLVFKGKFESCPRTSY*IYCPVL Trigger: AAGTACCGGGCAGTAAATGCAGTATGACGTTCTGGG...ACAGCTCTCGAATTTTCCTTTAAAGACCAGGTAGGTAGGAAAGGACAACAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTACATTTCTTCCCTTTTCTCTCGTGTCAGGAACCATCACAAGGCAGACTCTCGTCACCGCCAACCTTaGCAATTTCTCTTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: IYISSLFSRVRNHHKADSRHRQP*QFLFCI Trigger: AATGCAAAAGAGAAATTGTCAAGGTTGGCGGTGACG...AGAGTCTGCCTTGTGATGGTTCCTGACACGAGAGAAAAGGGAAGAAATGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATCCAGTCCTATGGATTaGCACAGACACAGCCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: DYSTSGPACLFLVLRNHKSSPMD*HRHSHL Trigger: TAGATGGCTGTGTCTGTGCCAATCCATAGGACTGGA...TTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR-3UTR TCA 90 bp | TCACAGACTTCACATCGACCCTCTCCAAACAAATATATGCCCTGCCAGTACTGTATTATAGAAAAAGTGTaGGATCTTGTGGCTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQTSHRPSPNKYMPCQYCIIEKV*DLVASP Trigger: AGGAGAAGCCACAAGATCTCACACTTTTTCTATAAT...ACAGTACTGGCAGGGCATATATTTGTTTGGAGAGGGTCGATGTGAAGTCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTACATTTCTTCCCTTTTCTCTCGTGTCAGGAACCATCACAAGGCAGACTCTAACCATGACCTTGTTTTaGACATCCGAGAAGACACAA | + |
|
Preference number: 2 (lower is better) Translates to: FTFLPFSLVSGTITRQTLTMTLF*TSEKTQ Trigger: TTGTGTCTTCTCGGATGTGCAAAACAAGGTCATGGT...TAGAGTCTGCCTTGTGATGGTTCCTGACACGAGAGAAAAGGGAAGAAATGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGAAAGGAAACTGGTCTACCCGAGGTAGAGCAGATGGGTAAGTTCCTCTCTCAGCTTGTCTCTTTTTaGTACTCAGAAATCACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RRKETGLPEVEQMGKFLSQLVSF*YSEITN Trigger: ATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTG...AGAGAGGAACTTACCCATCTGCTCTACCTCGGGTAGACCAGTTTCCTTTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR-3UTR CCA 90 bp | GACATTTTGGCTAGTTTCATTCCACTTCTCTTAACTACAAACCACGATCTTTTAAGGGAGGTGATGGAATaGCATCGTCCACATGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: DILASFIPLLLTTNHDLLREVME*HRPHAP Trigger: TGGAGCATGTGGACGATGCCATTCCATCACCTCCCT...TAAAAGATCGTGGTTTGTAGTTAAGAGAAGTGGAATGAAACTAGCCAAAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR GCA 90 bp | GATTTTTATAAGTTTGAAGTCAACCTTAGATACGGAGTAAGATCTGGGCTAGCCTCCTCCCATCACACATaGACAGATACAACTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: DFYKFEVNLRYGVRSGLASSHHT*TDTTHQ Trigger: CTGATGAGTTGTATCTGTGCATGTGTGATGGGAGGA...GGCTAGCCCAGATCTTACTCCGTATCTAAGGTTGACTTCAAACTTATAAAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR-3UTR CCA 90 bp | ATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATGTAGAGTTTGCTGAGTaGCTGTATGAGCAAACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ITVHQGQLVSFWYSEITNVEFAE*LYEQTD Trigger: ATCTGTTTGCTCATACAGCCACTCAGCAAACTCTAC...ATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 90 bp | CAATATTCAGGCCCAGAACGTCATACTGCATTTACTGCCCGGTACTaGATTTTTATAGTTCTCAGTTTGCTTTCTAGATTTACCTACATG | + |
|
Preference number: 2 (lower is better) Translates to: QYSGPERHTAFTARY*IFIVLSLLSRFTYM Trigger: CATGTAGGTAAATCTAGAAAGCAAACTGAGAACTATAAAAATCAAGTACCGGGCAGTAAATGCAGTATGACGTTCTGGGCCTGAATATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | CCTCTCCTTCCACCCTCCGCCCCCGCCCATCTGGGCTaGCTAGGGAAAAGAGGCCCAAGCCGATCACCATGT | + |
|
Preference number: 3 (lower is better) Translates to: PLLPPSAPAHLG*LGKRGPSRSPC Trigger: ACATGGTGATCGGCTTGGGCCTCTTTTCCCTAGTCAGCCCAGATGGGCGGGGGCGGAGGGTGGAAGGAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | ACTGATTCTCTCAAAGCCCTGTGTGAGGCTGGAGACTaGGCCCGCGGAGGGGGAGGAAGGAGGATGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TDSLKALCEAGD*ARGGGGRRMPP Trigger: TGGAGGCATCCTCCTTCCTCCCCCTCCGCGGGCCCAGTCTCCAGCCTCACACAGGGCTTTGAGAGAATCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | GGTGACCTTTGGGGTCTTCAAGCATCCGCCTGTGCTTaGCCACCCCGGCTCCCAGCACAAGGCCATCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GDLWGLQASACA*PPRLPAQGHLM Trigger: CATCAGATGGCCTTGTGCTGGGAGCCGGGGTGGCCAAGCACAGGCGGATGCTTGAAGACCCCAAAGGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | GCGCATGGGGACTTGTCCAGGATGCTGCGAGGGAAGTaGTTGGGAGGGTTGGGGGACAGGGCTGAAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: AHGDLSRMLRGK*LGGLGDRAEAI Trigger: TATGGCTTCAGCCCTGTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCATCCTGGACAAGTCCCCATGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | GGCCAAGTTCCCTTCCTGTTTTCCTTCACCTCTCCTTaGCACAGACATAGCCGCGGAGGGCCAGCCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GQVPFLFSFTSP*HRHSRGGPARG Trigger: TCCCCTGGCTGGCCCTCCGCGGCTATGTCTGTGGCAAGGAGAGGTGAAGGAAAACAGGAAGGGAACTTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | GTCCCCACAGCAAGTGTACAGATGGGTACAAGCAAGTaGCACGCCATGGGGGAGGGCTGGCTCCTGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VPTASVQMGTSK*HAMGEGWLLWS Trigger: AGACCACAGGAGCCAGCCCTCCCCCATGGCGTGGCACTTGCTTGTACCCATCTGTACACTTGCTGTGGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | CCTCCTGGCTGTCTTCCTCACCCCCTCCGCACACCTTaGACAGTTTCCACTAACATGGCCCCCATCCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPGCLPHPLRTP*TVSTNMAPIRA Trigger: TGCACGGATGGGGGCCATGTTAGTGGAAACTGTCCAAGGTGTGCGGAGGGGGTGAGGAAGACAGCCAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | GAAAGCAGTCAGAGCTGCGCCGGGCGCCTGTGCAGGTaGCAAGCTCAAAGGCAAGGCTTTAGAGGGTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESSQSCAGRLCR*QAQRQGFRGWF Trigger: GAACCACCCTCTAAAGCCTTGCCTTTGAGCTTGTCACCTGCACAGGCGCCCGGCGCAGCTCTGACTGCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | CTCAGGTTCCCACGGCAGAGCTGGAAAGTTCCCAGTTaGGGCTCCCATGGGCATAAACACCCTGAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: LRFPRQSWKVPS*GSHGHKHPEHG Trigger: GCCATGCTCAGGGTGTTTATGCCCATGGGAGCCCCAACTGGGAACTTTCCAGCTCTGCCGTGGGAACCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR TCA 72 bp | GTGCTTGGCCACCCCGGCTCCCAGCACAAGGCCATCTaGTGTTCTTATCGCCCTACACTGAGTTTTCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLGHPGSQHKAI*CSYRPTLSFRH Trigger: GTGGCGAAAACTCAGTGTAGGGCGATAAGAACATCAGATGGCCTTGTGCTGGGAGCCGGGGTGGCCAAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR GCA 72 bp | GCGTGTAGTTTTTGTGCAGTTAAATTCCCCTGCCTCTaGCTCGGCACTTCCACGGAGCCACAGTGCCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: ACSFCAVKFPCL*LGTSTEPQCPR Trigger: CCGAGGGCACTGTGGCTCCGTGGAAGTGCCGAGGCAGAGGCAGGGGAATTTAACTGCACAAAAACTACACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CCA 72 bp | CACCTCCAGGAAGGCTGCCCTAAGGCTCCCACACCATaGGGACTGAGGGCATCTGTGGTTGTTACATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLQEGCPKAPTP*GLRASVVVTSA Trigger: TGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | ATGGGGACTTGTCCAGGATGCTGCGAGGGAAGTGATTaGGAGGGTTGGGGGACAGGGCTGAAGCCATATGAC | + |
|
Preference number: 3 (lower is better) Translates to: MGTCPGCCEGSD*EGWGTGLKPYD Trigger: GTCATATGGCTTCAGCCCTGTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCATCCTGGACAAGTCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | TCCACCTCCACAGTGAGCACAGACCCCTTCATCCCGTaGAAGGCCTCCTACTCAGGGATGGGATCTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: STSTVSTDPFIP*KASYSGMGSWT Trigger: AGTCCAAGATCCCATCCCTGAGTAGGAGGCCTTCCACGGGATGAAGGGGTCTGTGCTCACTGTGGAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | GAAGCGTGCACCTGCCAGAGAGAAAGGGGCTCCAGATaGAACCAAAAGACCCGTTCCCTGAGCTCTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EACTCQRERGSR*NQKTRSLSSGA Trigger: TGCTCCAGAGCTCAGGGAACGGGTCTTTTGGTTTCATCTGGAGCCCCTTTCTCTCTGGCAGGTGCACGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | CTGACTAGGGAAAAGAGGCCCAAGCCGATCACCATGTaGCCCCTGCTGAGAAGGCTTTGGGACTCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTREKRPKPITM*PLLRRLWDSEV Trigger: CACTTCAGAGTCCCAAAGCCTTCTCAGCAGGGGGCACATGGTGATCGGCTTGGGCCTCTTTTCCCTAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | ATGCTCCAGGAAGGCTGCCCTAAGGCTCCCACACCATaGGGACTGAGGGCATCTGTGGTTGTTACATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MLQEGCPKAPTP*GLRASVVVTSA Trigger: TGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | CGACCTCCTGCAGTTGAGGCCTTTGGGGGACAAGAATaGACCTGGGACTTGGAAGGGCCTCTAGCATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPPAVEAFGGQE*TWDLEGPLAFA Trigger: TGCAAATGCTAGAGGCCCTTCCAAGTCCCAGGTTCATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | GACGACCTCCTGCAGTTCATGACGACCTCCTGCAGTTaGGGCCTTTGGGGGACAAGAATGAACCTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: DDLLQFMTTSCS*GLWGTRMNLGL Trigger: AAGTCCCAGGTTCATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCGTCATGAACTGCAGGAGGTCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | GTTATAGAGGGAGGTGATGGAATGGCATCGTCCACATaGTCCAGGAAGGCTGCCCTAAGGCTCCCACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: VIEGGDGMASST*SRKAALRLPHH Trigger: ATGGTGTGGGAGCCTTAGGGCAGCCTTCCTGGAGCATGTGGACGATGCCATTCCATCACCTCCCTCTATAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CCA 72 bp | TGTCCAGGATGCTGCGAGGGAAGTGATTGGGAGGGTTaGGGGACAGGGCTGAAGCCATATGACCTTCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPGCCEGSDWEG*GTGLKPYDLPK Trigger: TTTAGGAAGGTCATATGGCTTCAGCCCTGTCCCCCAACCCTCCCAATCACTTCCCTCGCAGCATCCTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | AAAAGAGGCCCAAGCCGATCACCATGTGCCCCCTGCTaGGAAGGCTTTGGGACTCTGAAGTGTTGCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KRGPSRSPCAPC*EGFGTLKCCMY Trigger: GTACATGCAACACTTCAGAGTCCCAAAGCCTTCTCAGCAGGGGGCACATGGTGATCGGCTTGGGCCTCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | CTGAGGAAGGGTTTCCCAGTCAGTCCCAAAGCTCACTaGTATGGCCACTCTTGCTTGCTCTGGGATCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRKGFPVSPKAH*YGHSCLLWDLL Trigger: CAGGAGATCCCAGAGCAAGCAAGAGTGGCCATATCAGTGAGCTTTGGGACTGACTGGGAAACCCTTCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | GAAACGCTCCTGGCACTCTTTCTAGACCTATACAAGTaGGCATGGGGACTTGTCCAGGATGCTGCGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ETLLALFLDLYK*AWGLVQDAARE Trigger: TTCCCTCGCAGCATCCTGGACAAGTCCCCATGCGCACTTGTATAGGTCTAGAAAGAGTGCCAGGAGCGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | ACGCGCAAACACACACACGCACACACACACGCACTTTaGCTTCCTTTCCAGAAGGCCAAGTTCCCTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TRKHTHAHTHAL*LPFQKAKFPSC Trigger: ACAGGAAGGGAACTTGGCCTTCTGGAAAGGAAGGCAAAGTGCGTGTGTGTGTGCGTGTGTGTGTTTGCGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | CTCCAGATGAAACCAAAAGACCCGTTCCCTGAGCTCTaGAGCACAAGAGATCCTTCCAGGACTCCGTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LQMKPKDPFPEL*STRDPSRTPWL Trigger: TAGCCACGGAGTCCTGGAAGGATCTCTTGTGCTCCAGAGCTCAGGGAACGGGTCTTTTGGTTTCATCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | CCCTTCACCAGACTCGACTCTGGCTCTGAGTACTGCTaGCTAAGAGGTGAATGGGAAGCAAATGGTGTGCGA | + |
|
Preference number: 3 (lower is better) Translates to: PFTRLDSGSEYC*LRGEWEANGVR Trigger: TCGCACACCATTTGCTTCCCATTCACCTCTTAGCCAGCAGTACTCAGAGCCAGAGTCGAGTCTGGTGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | CAAGTGTACAGATGGGTACAAGCAAGTGCCACGCCATaGGGGAGGGCTGGCTCCTGTGGTCTAGAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVYRWVQASATP*GRAGSCGLEQK Trigger: TTTTTGTTCTAGACCACAGGAGCCAGCCCTCCCCCATGGCGTGGCACTTGCTTGTACCCATCTGTACACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGCGCACGCGCAAACACACACACGCACACACACACGCACTTTGCCTTCCTTTCTATCAAGAGTCATGTTaGCTGACCAGATGCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TRTRKHTHAHTHALCLPFYQESC*LTRCRE Trigger: CTCCCTGCATCTGGTCAGCAAACATGACTCTTGATA...GAAAGGAAGGCAAAGTGCGTGTGTGTGTGCGTGTGTGTGTTTGCGCGTGCGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | TGGGGGACAGGGCTGAAGCCATATGACCTTCCTAAATaGTATCATTTGAAAGCAGTCAGAGCTGCGCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WGTGLKPYDLPK*YHLKAVRAAPG Trigger: GCCCGGCGCAGCTCTGACTGCTTTCAAATGATATCATTTAGGAAGGTCATATGGCTTCAGCCCTGTCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | TTCTGCTCGCCCTCCAGAACCTTCCTAACAGGGAGCTaGCAGTCATGGATGGAGCAAAGGGAATGTGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FCSPSRTFLTGS*QSWMEQRECGV Trigger: TACACCACATTCCCTTTGCTCCATCCATGACTGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| 3UTR CCA 72 bp | CTTACCAAAGTTTGGGCTCAAAGCAAGCTGAAGTTGTaGGGCCGACCCAGATGGAGCCTGACTAGAGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTKVWAQSKLKL*GRPRWSLTRDG Trigger: TCCATCTCTAGTCAGGCTCCATCTGGGTCGGCCCCACAACTTCAGCTTGCTTTGAGCCCAAACTTTGGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAGCTGGCACATATTCTCCCCAAGCTACTCCCAAGGCCAACACCCACACATTGAGGGGTTTTGATTaGGAGACAGAAACGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRAGTYSPQATPKANTHTLRGFD*ETETLL Trigger: CAGGAGCGTTTCTGTCTCCAAATCAAAACCCCTCAA...TGTGTGGGTGTTGGCCTTGGGAGTAGCTTGGGGAGAATATGTGCCAGCTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | GAAGGGCCTCTAGCATTTGCACTTGGGCAAGAAAACTaGGAGCTGGCACATATTCTCCCCAAGCTACTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EGPLAFALGQEN*ELAHILPKLLP Trigger: TGGGAGTAGCTTGGGGAGAATATGTGCCAGCTCTCAGTTTTCTTGCCCAAGTGCAAATGCTAGAGGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | TCAGTCCCAAAGCTCACTGATATGGCCACTCTTGCTTaGTCTGGGATCTCCTGTCACCAGCTTCTCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SVPKLTDMATLA*SGISCHQLLSL Trigger: CAAACTGAGAAGCTGGTGACAGGAGATCCCAGAGCAAGCAAGAGTGGCCATATCAGTGAGCTTTGGGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | ATCCCGTGGAAGGCCTCCTACTCAGGGATGGGATCTTaGACTGATAACTCTCTAACACACGCACACATCACA | + |
|
Preference number: 3 (lower is better) Translates to: IPWKASYSGMGS*TDNSLTHAHIT Trigger: TGTGATGTGTGCGTGTGTTAGAGAGTTATCAGTCCAAGATCCCATCCCTGAGTAGGAGGCCTTCCACGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | AACCTGGGACTTGGAAGGGCCTCTAGCATTTGCACTTaGGCAAGAAAACTGAGAGCTGGCACATATTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NLGLGRASSICT*ARKLRAGTYSP Trigger: GGGAGAATATGTGCCAGCTCTCAGTTTTCTTGCCCAAGTGCAAATGCTAGAGGCCCTTCCAAGTCCCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CCA 72 bp | AGGCTTTGGGACTCTGAAGTGTTGCATGTACCGTTGTaGCCTTTTCATGACGACCTCCTGCAGTTCATGACG | + |
|
Preference number: 3 (lower is better) Translates to: RLWDSEVLHVPL*PFHDDLLQFMT Trigger: CGTCATGAACTGCAGGAGGTCGTCATGAAAAGGCCACAACGGTACATGCAACACTTCAGAGTCCCAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGCCCAATCTCTGTCCCCACAGCAAGTGTACAGATGGGTACAAGCAAGTGAGGCCTCTCAGGAATTaGAGGGGTTTTGATTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IWPNLCPHSKCTDGYKQVRPLRN*RGFDLE Trigger: CTCCAAATCAAAACCCCTCAAATTCCTGAGAGGCCT...CACTTGCTTGTACCCATCTGTACACTTGCTGTGGGGACAGAGATTGGGCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTTCTTTGCTGTAGTGCAGCATTCTGAGCCATCTCTTCCTCCTGGCTGTTTCCCCAACATCCTGTaGTCCTTTCCTACCTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: CFFFAVVQHSEPSLPPGCFPNIL*SFPTYL Trigger: CAGGTAGGTAGGAAAGGACAACAGGATGTTGGGGAA...ACAGCCAGGAGGAAGAGATGGCTCAGAATGCTGCACTACAGCAAAGAAGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | CTGGAGCATCAGGCCTCTCAGGAATTTGAGGGGTTTTaGTTTGGAGACAGAAACGCTCCTGGCACTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LEHQASQEFEGF*FGDRNAPGTLS Trigger: AGAAAGAGTGCCAGGAGCGTTTCTGTCTCCAAATCAAAACCCCTCAAATTCCTGAGAGGCCTGATGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | TGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTaGGGTCAGATAATTCGTCTGAGAGCAGATGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CYISRRPLLHHT*GQIIRLRADGL Trigger: CAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| 3UTR CCA 72 bp | TCTTGTTTCCTTTTTCCCCATTTCCATGTGGATGTGTaGTGTGTGGTGTGGTGTGGTGTGGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCFLFPHFHVDV*CVVWCGVVCVC Trigger: ACACACACACACCACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAAACAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR GCA 72 bp | ATGGGTAAGTTCCTCTCTGGCCATCCTTCTCCAGTTTaGTCACTCCAACCTAATTTTCTCTGTGAAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MGKFLSGHPSPV*SLQPNFLCEAS Trigger: TGAGGCTTCACAGAGAAAATTAGGTTGGAGTGAGCAAACTGGAGAAGGATGGCCAGAGAGGAACTTACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGTGTGGTGTGGTGTGATAACTTACCAAAGTTaGGGCTCAAAGCAAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLFPHFHVDVWCVVWCGVITYQS*GSKQAE Trigger: TTCAGCTTGCTTTGAGCCCAAACTTTGGTAAGTTAT...CACACCACACCACACCACACACCACACATCCACATGGAAATGGGGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR TCA 72 bp | CTCTTTTGCATTTGCGGTTTGCATGGTTGTGCACCATaGCCTTGTTTTGCACATCCGAGAAGACACAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFCICGLHGCAP*PCFAHPRRHKN Trigger: ATTCTTGTGTCTTCTCGGATGTGCAAAACAAGGTCATGGTGCACAACCATGCAAACCGCAAATGCAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR GCA 72 bp | ACAATTTCTCTTTTGCATTTGCGGTTTGCATGGTTGTaGACCATGACCTTGTTTTGCACATCCGAGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TISLLHLRFAWL*TMTLFCTSEKT Trigger: TGTCTTCTCGGATGTGCAAAACAAGGTCATGGTGCACAACCATGCAAACCGCAAATGCAAAAGAGAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAAACAAATATATGCCCTGCCAGTACTGTTAAGCCGTTTCTATGTAGCTTTAAGATATTTTGCCTaGACAGTGTCCCCAGAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSKQIYALPVLLSRFYVALRYFA*TVSPEY Trigger: GTACTCTGGGGACACTGTCAAGGCAAAATATCTTAA...AGCTACATAGAAACGGCTTAACAGTACTGGCAGGGCATATATTTGTTTGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTACATTTCTTCCCTTTTCTCTCGTGTCAGGAACCATCACAAGGCAGACTCTCCTTGGACAGACATTTaGGCTAGTTTCATTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: IYISSLFSRVRNHHKADSPWTDI*ASFIPL Trigger: AAGTGGAATGAAACTAGCCAAAATGTCTGTCCAAGG...AGAGTCTGCCTTGTGATGGTTCCTGACACGAGAGAAAAGGGAAGAAATGTAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CCA 72 bp | CATTCCCCAACATCCTGTTGTCCTTTCCTACCTACCTaGTCTTTAAAGGAAAATTCGAGAGCTGTATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: HSPTSCCPFLPT*SLKENSRAVFT Trigger: TGTAAATACAGCTCTCGAATTTTCCTTTAAAGACCAGGTAGGTAGGAAAGGACAACAGGATGTTGGGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | CAGAAAGGTGGTCACATACATGTCCATTTTAGCACCTaGGTTTCTGCGTGTAGTTTTTGTGCAGTTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: QKGGHIHVHFST*VSACSFCAVKF Trigger: GAATTTAACTGCACAAAAACTACACGCAGAAACTCAGGTGCTAAAATGGACATGTATGTGACCACCTTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR GCA 72 bp | TCAATATTCAGGCCCAGAACGTCATACTGCATTTACTaGCCGGTACTTGATTTTTATAGTTCTCAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SIFRPRTSYCIY*PVLDFYSSQFA Trigger: AGCAAACTGAGAACTATAAAAATCAAGTACCGGGCAGTAAATGCAGTATGACGTTCTGGGCCTGAATATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGGTCTTTAAAGGAAAATTCGAGAGCTGTATTTACATTTCTTCCCTTTTCTACGTCACCGCCAACCTaGACAATTTCTCTTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TWSLKENSRAVFTFLPFSTSPPT*TISLLH Trigger: ATGCAAAAGAGAAATTGTCAAGGTTGGCGGTGACGT...AGAAAAGGGAAGAAATGTAAATACAGCTCTCGAATTTTCCTTTAAAGACCAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR TCA 72 bp | TATGAAATGTCTCCGGTATTTACTTGGGAATGTTCCTaGGAGTCGATGTTAAGTAGAAAAACAGTACGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YEMSPVFTWECS*ESMLSRKTVRG Trigger: ACCACGTACTGTTTTTCTACTTAACATCGACTCTCAGGAACATTCCCAAGTAAATACCGGAGACATTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTGGCCACCCCGGCTCCCAGCACAAGGCCATCTGATGTTCTTATCGCCCCTTCTTCCTTGGGGTTaGCCTGCTCCTCCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CAWPPRLPAQGHLMFLSPLLPWG*PAPPPQ Trigger: TTGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAG...GGGCGATAAGAACATCAGATGGCCTTGTGCTGGGAGCCGGGGTGGCCAAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCACGGCAGAGCTGGAAAGTTCCCAGTTGGGGCTCCCATGGGCATAAACGGTTCTTGGAGAGCCTaGGGCCCTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHGRAGKFPVGAPMGINGSWRA*GPPWPF Trigger: AAATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACC...GTTTATGCCCATGGGAGCCCCAACTGGGAACTTTCCAGCTCTGCCGTGGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | CTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTGGTACTGCCCGCGGCTGGTGCCTaGCCCTCTGAGGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNRGGLMQGVDYTGLVLPAAGA*PSEGAA Trigger: AGCAGCCCCCTCAGAGGGCCAGGCACCAGCCGCGGG...CAGTACCAAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | ACAGTCATGGATGGAGCAAAGGGAATGTGGTGTAGACCTGGCCCAGAGCCCGCAGGTTCTTGGAGAGCCTaGGGCCCTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVMDGAKGMWCRPGPEPAGSWRA*GPPWPF Trigger: AAATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACC...TGCGGGCTCTGGGCCAGGTCTACACCACATTCCCTTTGCTCCATCCATGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CCA 90 bp | TCCCACCTTCTGCTCGCCCTCCAGAACCTTCCTAACAGGGAGCTGACAGTCATGAGAACTTCTGGTTCTTaGAGAGCCTGGGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLLLALQNLPNRELTVMRTSGS*RAWGPP Trigger: AGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCT...CATGACTGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAGCAGAAGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCAGTTCATGACGACCTCCTGCAGTTGAGGCCTTTGGGGGACAAGAATAAGGGTGGGCAGCAGTaGATGCTGAAGTGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPAVHDDLLQLRPLGDKNKGGQQ*MLKCSE Trigger: CTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTT...ATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCGTCATGAACTGCAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCCCTCCAGAACCTTCCTAACAGGGAGCTGACAGTCATGGATGGAGCAAAGAAGGGTGGGCAGCAGTaGATGCTGAAGTGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LALQNLPNRELTVMDGAKKGGQQ*MLKCSE Trigger: CTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTT...CTTTGCTCCATCCATGACTGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTTCATGACGACCTCCTGCAGTTGAGGCCTTTGGGGGACAAGAATGAACCTGGTTCTTGGAGAGCCTaGGGCCCTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AVHDDLLQLRPLGDKNEPGSWRA*GPPWPF Trigger: AAATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACC...AGGTTCATTCTTGTCCCCCAAAGGCCTCAACTGCAGGAGGTCGTCATGAACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTTCTTCTTTGCTGTAGTGCAGCATTCTGAGCCATCTCTTCCTCCTGGCAAGGGTGGGCAGCAGTaGATGCTGAAGTGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACFFFAVVQHSEPSLPPGKGGQQ*MLKCSE Trigger: CTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTT...GCCAGGAGGAAGAGATGGCTCAGAATGCTGCACTACAGCAAAGAAGAAGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTTTGCTCACTCCAACCTAATTTTCTCTGTGAAGCCTCAGGTTCCCACCAGCTGGCTGGTGCTTaGGCCTCTGAGGGGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCSLQPNFLCEASGSHQLAGA*ASEGTW Trigger: CCACGTCCCCTCAGAGGCCCAAGCACCAGCCAGCTG...GTGGGAACCTGAGGCTTCACAGAGAAAATTAGGTTGGAGTGAGCAAACTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTCCTCGGTGGGGACCTTaGCTTGGCTGGCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSFKQRGFNAGSGLHRLPRWGP*LGWHQR Trigger: CCTCTGATGCCAGCCAAGCCAAGGTCCCCACCGAGG...AAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAGACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTTTGCTCACTCCAACCTAATTTTCTCTGTGAAGCCTCAGGTTCCCACCTTGGCTGGCCTCGGTaGGGACCTTGGCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCSLQPNFLCEASGSHLGWPR*GPWLGW Trigger: CCAGCCAAGCCAAGGTCCCCACCGAGGCCAGCCAAG...GTGGGAACCTGAGGCTTCACAGAGAAAATTAGGTTGGAGTGAGCAAACTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTGAGGGGGCTTCTGCTTaGCTGGTGGTGGTCGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSFKQRGFNAGSGLHRLEGASA*LVVVGP Trigger: AGGTCCGACCACCACCAGCCAAGCAGAAGCCCCCTC...AAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAGACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | CACGCGCAAACACACACACGCACACACACACGCACTTaGCCTTCCTTTCCAGAAGGCCAAGTTCCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAQTHTRTHTRT*PSFPEGQVPFL Trigger: CAGGAAGGGAACTTGGCCTTCTGGAAAGGAAGGCAAAGTGCGTGTGTGTGTGCGTGTGTGTGTTTGCGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCACAGGTTCTTGGAGAGCCTaGGGCCCTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RSDNSSESRWVAGSSESTGSWRA*GPPWPF Trigger: AAATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACC...TGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCAAGGGTGGGCAGCAGTaGATGCTGAAGTGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSDNSSESRWVAGSSESKGGQQ*MLKCSE Trigger: CTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTT...GGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTGTGGGGACCTTGGCTTaGCTGGCATCAGAGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ARSFKQRGFNAGSGLHRLVGTLA*LASEGT Trigger: AGTCCCCTCTGATGCCAGCCAAGCCAAGGTCCCCAC...AAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAGACCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | TGCCCCCTGCTGAGAAGGCTTTGGGACTCTGAAGTGTaGCATGTACCGTTGTGGCCTTTTCATGACGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPLLRRLWDSEV*HVPLWPFHDDL Trigger: GAGGTCGTCATGAAAAGGCCACAACGGTACATGCAACACTTCAGAGTCCCAAAGCCTTCTCAGCAGGGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CAA 72 bp | CCCAGTCAGTCCCAAAGCTCACTGATATGGCCACTCTaGCTTGCTCTGGGATCTCCTGTCACCAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQSQSSLIWPL*LALGSPVTSFS Trigger: TGAGAAGCTGGTGACAGGAGATCCCAGAGCAAGCAAGAGTGGCCATATCAGTGAGCTTTGGGACTGACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCCTTCTTCCTTGGGGTTaGCCTGCTCCTCCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSDNSSESRWVAGSSESLLPWG*PAPPPQ Trigger: TTGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAG...GGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTGAGCTTCTTCCTTGGGGTTaGCCTGCTCCTCCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RASVVVTSAGVHSCIILELLPWG*PAPPPQ Trigger: TTGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAG...CTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATGGATGGAGCAAAGGGAATGTGGTGTAGACCTGGCCCAGAGCCCGCAAAAAGCAACCGCTCTTaGAGATGCTGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVMDGAKGMWCRPGPEPAKSNRS*RCCTCG Trigger: ACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTT...TGCGGGCTCTGGGCCAGGTCTACACCACATTCCCTTTGCTCCATCCATGACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATACTTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCGGTTCTTGGAGAGCCTaGGGCCCTCCTTGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASYLRSDNSSESRWVAGSGSWRA*GPPWPF Trigger: AAATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACC...GCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTTTGCTCACTCCAACCTAATTTTCTCTGTGAAGCCTCAGGTTCCCACCGGCGGCTAGTCTTCTaGCAGGCACAGCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCSLQPNFLCEASGSHRRLVF*QAQQIQ Trigger: CTGGATCTGCTGTGCCTGCCAGAAGACTAGCCGCCG...GTGGGAACCTGAGGCTTCACAGAGAAAATTAGGTTGGAGTGAGCAAACTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | CTGTCACCAGCTTCTCAGTTTGGATTTAGAGGTACGTaGTCAGGCCTACCCAGCATTCGTGTGGGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPASQFGFRGT*SGLPSIRVGHG Trigger: CCCATGACCCACACGAATGCTGGGTAGGCCTGACAACGTACCTCTAAATCCAAACTGAGAAGCTGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| 3UTR CAA 72 bp | GCTTGCTCTGGGATCTCCTGTCACCAGCTTCTCAGTTaGGATTTAGAGGTACGTTGTCAGGCCTACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACSGISCHQLLS*DLEVRCQAYPA Trigger: TGCTGGGTAGGCCTGACAACGTACCTCTAAATCCAAACTGAGAAGCTGGTGACAGGAGATCCCAGAGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATTGGTGCTTGGGCCTCTaGGGGGACGTGGCACGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ITVHQGQLVSFWYSEITNWCLGL*GDVARR Trigger: CCGCCGTGCCACGTCCCCTCAGAGGCCCAAGCACCA...ATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR TCA 90 bp | CATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATTATTTTCCTTGGCTGGCGGCGCTCTaGCCACCACTGGGGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQGQLVSFWYSEITNYFPWLAAL*PPLGTQ Trigger: CTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCCA...AGGAAAATAATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTACTGCTGGCTAAGAGGTGAATGGGAAGCAAATGGTGTGCGAGCAAGAAGAACTTCTGGTTCTTaGAGAGCCTGGGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEYCWLRGEWEANGVRARRTSGS*RAWGPP Trigger: AGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCT...TCTTGCTCGCACACCATTTGCTTCCCATTCACCTCTTAGCCAGCAGTACTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | TACTTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGAGAACTTCTGGTTCTTaGAGAGCCTGGGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLRSDNSSESRWVAGSSERTSGS*RAWGPP Trigger: AGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCT...CTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTGAGGCTCAATCTAGTCTTCTaGCAGGCACAGCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLWLLHQQASTPASYLRLNLVF*QAQQIQ Trigger: CTGGATCTGCTGTGCCTGCCAGAAGACTAGATTGAG...CCTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCACAGGCAAAAGCAACCGCTCTTaGAGATGCTGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNSSESRWVAGSSESTGKSNRS*RCCTCG Trigger: ACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTT...GCCTGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | GGATGTCAATATTCAGGCCCAGAACGTCATACTGCATTTACTGCCCGGTACTTGAGAACTTCTGGTTCTTaGAGAGCCTGGGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCQYSGPERHTAFTARYLRTSGS*RAWGPP Trigger: AGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCT...CAAGTACCGGGCAGTAAATGCAGTATGACGTTCTGGGCCTGAATATTGACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCCTCAATCTAGTCTTCTaGCAGGCACAGCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSDNSSESRWVAGSSESLNLVF*QAQQIQ Trigger: CTGGATCTGCTGTGCCTGCCAGAAGACTAGATTGAG...GGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTCTCAATCTAGTCTTCTaGCAGGCACAGCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRASVVVTSAGVHSCIILLNLVF*QAQQIQ Trigger: CTGGATCTGCTGTGCCTGCCAGAAGACTAGATTGAG...AAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCACTGAGTCAGGCCCTGAGCCTGGTTTCCTTGTGAATAGAGACATGGCCAAAAGCAACCGCTCTTaGAGATGCTGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTESGPEPGFLVNRDMAKSNRS*RCCTCG Trigger: ACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTT...GGCCATGTCTCTATTCACAAGGAAACCAGGCTCAGGGCCTGACTCAGTGGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCACAAAAAGCAACCGCTCTTaGAGATGCTGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSDNSSESRWVAGSSESTKSNRS*RCCTCG Trigger: ACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTT...TGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATTATTTTCCTCACTGGGGACGCAGCTaGCTGGTGCTTGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQGQLVSFWYSEITNYFPHWGRS*LVLGPL Trigger: CAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTG...AGGAAAATAATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | TCAGGCCTACCCAGCATTCGTGTGGGTCATGGGGATTaGAACTCTAGCTCTCATGCTTGCAAGGCAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGLPSIRVGHGD*NSSSHACKARI Trigger: AATTCTTGCCTTGCAAGCATGAGAGCTAGAGTTCAAATCCCCATGACCCACACGAATGCTGGGTAGGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | GATTTTTATAAGTTTGAAGTCAACCTTAGATACGGAGTAAGATCTGGGCTAGCCGGACTTTGGCTTGGCTaGCGGCGCTCTGACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DFYKFEVNLRYGVRSGLAGLWLG*RRSDHH Trigger: GTGGTGGTCAGAGCGCCGCCAGCCAAGCCAAAGTCC...GGCTAGCCCAGATCTTACTCCGTATCTAAGGTTGACTTCAAACTTATAAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATTATTTTCCTCTCCCGGACCTTGGCTTGGCTaGCATCAGAGGGGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPACLFLVLRNHKLFSSPGPWLG*HQRGLW Trigger: CCAAAGTCCCCTCTGATGCCAGCCAAGCCAAGGTCC...GGGAGAGGAAAATAATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | AGCATCAGGCCTCTCAGGAATTTGAGGGGTTTTGATTaGGAGACAGAAACGCTCCTGGCACTCTTTCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIRPLRNLRGFD*ETETLLALFLD Trigger: GTCTAGAAAGAGTGCCAGGAGCGTTTCTGTCTCCAAATCAAAACCCCTCAAATTCCTGAGAGGCCTGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | GATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAAAAGGGTGGGCAGCAGTaGATGCTGAAGTGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYSTSGPACLFLVLRNHKKGGQQ*MLKCSE Trigger: CTCCGAGCACTTCAGCATCCACTGCTGCCCACCCTT...TTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | TTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTaGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHQQASTPASY*RSDNSSESRWV Trigger: AACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| 3UTR CAA 72 bp | AGCATACAGGGGTGCATGTGCATGGAGTCCCTGAGTTaGACATTGGGAGTCAGTCCTATATCTTCTACCATA | + |
|
Preference number: 4 (lower is better) Translates to: SIQGCMCMESLS*TLGVSPISSTI Trigger: TATGGTAGAAGATATAGGACTGACTCCCAATGTCAAACTCAGGGACTCCATGCACATGCACCCCTGTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATAGAACTTCTGGTTCTTaGAGAGCCTGGGGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITVHQGQLVSFWYSEITNRTSGS*RAWGPP Trigger: AGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCT...ATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | GTAGCTGCTAGGATTTTTCTCACGTCACCGCCAACCTaGACAATTTCTCTTTTGCATTTGCGGTTTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VAARIFLTSPPT*TISLLHLRFAW Trigger: CCATGCAAACCGCAAATGCAAAAGAGAAATTGTCAAGGTTGGCGGTGACGTGAGAAAAATCCTAGCAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CAA 72 bp | TTGCATTTGCGGTTTGCATGGTTGTGCACCATGACCTaGTTTTGCACATCCGAGAAGACACAAGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLRFAWLCTMT*FCTSEKTQESS Trigger: TGAAGATTCTTGTGTCTTCTCGGATGTGCAAAACAAGGTCATGGTGCACAACCATGCAAACCGCAAATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS-3UTR GCA 90 bp | GATTACAGTACATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAAAAAAGCAACCGCTCTTaGAGATGCTGTACTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DYSTSGPACLFLVLRNHKKSNRS*RCCTCG Trigger: ACCGCAAGTACAGCATCTGCAAGAGCGGTTGCTTTT...TTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATGTACTGTAATC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| 3UTR CAA 72 bp | ACCGCTGTTAGGACTTTATTTGTGAACGTCCCAAAATaGATTCTCTCATTCCCTTGGACAGACATTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVRTLFVNVPK*ILSFPWTDILA Trigger: AGCCAAAATGTCTGTCCAAGGGAATGAGAGAATCAATTTTGGGACGTTCACAAATAAAGTCCTAACAGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CAA 72 bp | AGTAACCCATCAGCTTCAAGCAATCTCCAGATAGGTTaGATCCATCCCCAGGTTTTATTTCTACAACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNPSASSNLQIG*IHPQVLFLQQT Trigger: TGTTTGTTGTAGAAATAAAACCTGGGGATGGATCAAACCTATCTGGAGATTGCTTGAAGCTGATGGGTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| 3UTR CAA 72 bp | CCAAAATTGATTCTCTCATTCCCTTGGACAGACATTTaGGCTAGTTTCATTCCACTTCTCTTAACTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKLILSFPWTDI*ASFIPLLLTTN Trigger: GTTTGTAGTTAAGAGAAGTGGAATGAAACTAGCCAAAATGTCTGTCCAAGGGAATGAGAGAATCAATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
||
| CDS CCA 90 bp | CTTTGGCTTGGCTGGCGGCGCTCTGACCACCACTGGGGACGCAGCTaGCTGGTGCTTGGGCCTCTGAGGGGACGTGGCACGGCGGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LWLGWRRSDHHWGRS*LVLGPLRGRGTAAS Trigger: ACTAGCCGCCGTGCCACGTCCCCTCAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCCAAGCCAAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS TCA 90 bp | GCTCTGACCACCACTGGGGACGCAGCTGGCTGGTGCTTGGGCCTCTaGGGGGACGTGGCACGGCGGCTAGTCTTCTGGCAGGCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALTTTGDAAGWCLGL*GDVARRLVFWQAQQ Trigger: CTGCTGTGCCTGCCAGAAGACTAGCCGCCGTGCCACGTCCCCTCAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTGGTGGTCAGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS CCA 90 bp | TTCTGCTTGGCTGGTGGTGGTCGGACCTCTGGGCGGGGACGCGGCTaGCGCTCAGTCCTTGAAGGGGACCTTGGCTTGGCTGGCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLAGGGRTSGRGRG*RSVLEGDLGLAGLG Trigger: ACCGAGGCCAGCCAAGCCAAGGTCCCCTTCAAGGACTGAGCGCCAGCCGCGTCCCCGCCCAGAGGTCCGACCACCACCAGCCAAGCAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTCCCACCTTCTGCTCGCCCTCCAGAACCTTCCTAACAGGGAGCTGACAGAGAACTTCTGGTTCTaGGAGAGCCTGGGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPSHLLLALQNLPNRELTENFWF*ESLGPS Trigger: GGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTC...TGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAGCAGAAGGTGGGAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCCCACGGCAGAGCTGGAAAGTTCCCAGTTGGGGCTCCCATGGGCATAAACGAGAACTTCTGGTTCTaGGAGAGCCTGGGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHGRAGKFPVGAPMGINENFWF*ESLGPS Trigger: GGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTC...GTTTATGCCCATGGGAGCCCCAACTGGGAACTTTCCAGCTCTGCCGTGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CAA 90 bp | TCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCACAGGCGAGAACTTCTGGTTCTaGGAGAGCCTGGGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDNSSESRWVAGSSESTGENFWF*ESLGPS Trigger: GGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTC...GCCTGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGGGGACTGAGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGATCTCACGCTTGGAGTaGAGGAAGGTGAAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TMGTEGICGCYISRRPLLISRLE*RKVKGG Trigger: CCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGAT...CAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAGTCCCCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTGAGAACTTCTGGTTCTaGGAGAGCCTGGGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRASVVVTSAGVHSCIILENFWF*ESLGPS Trigger: GGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTC...AAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCAGTGAGTCCACAGAGAACTTCTGGTTCTaGGAGAGCCTGGGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSDNSSESRWVAGSSESTENFWF*ESLGPS Trigger: GGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTC...TGTGGACTCACTGCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGACAGTCATGGATGGAGCAAAGGGAATGTGGTGTAGACCTGGCCCAGAGATCTCACGCTTGGAGTaGAGGAAGGTGAAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELTVMDGAKGMWCRPGPEISRLE*RKVKGG Trigger: CCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGAT...CTCTGGGCCAGGTCTACACCACATTCCCTTTGCTCCATCCATGACTGTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTGGTACTGGCCTCGGTGGGGACCTaGGCTTGGCTGGCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSNRGGLMQGVDYTGLVLASVGT*AWLASE Trigger: CTCTGATGCCAGCCAAGCCAAGGTCCCCACCGAGGC...CAGTACCAAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
||
| CDS-3UTR CAA 90 bp | CTCGCCCTCCAGAACCTTCCTAACAGGGAGCTGACAGTCATGGATGGAGCAAAGTCCACGATCTCACGCTaGGAGTTGAGGAAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LALQNLPNRELTVMDGAKSTISR*ELRKVK Trigger: CTTCACCTTCCTCAACTCCAAGCGTGAGATCGTGGA...CTTTGCTCCATCCATGACTGTCAGCTCCCTGTTAGGAAGGTTCTGGAGGGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215512.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTGAGACTTCTTCCTTGGGGTaGACCTGCTCCTCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RASVVVTSAGVHSCIILETSSLG*TCSSSS Trigger: TGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAGT...CTCAAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGTCTTTCAAACAGAGGGGGTTTAATGCAGGGAGTGGATTACACAGGCTTATCTCACGCTTGGAGTaGAGGAAGGTGAAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ARSFKQRGFNAGSGLHRLISRLE*RKVKGG Trigger: CCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGAT...AAGCCTGTGTAATCCACTCCCTGCATTAAACCCCCTCTGTTTGAAAGACCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS-3UTR CAA 90 bp | GCATCATACTTGAGGTCAGATAATTCGTCTGAGAGCAGATGGGTTGCGGGAAGCATCTCACGCTTGGAGTaGAGGAAGGTGAAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASYLRSDNSSESRWVAGSISRLE*RKVKGG Trigger: CCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGAT...GCTTCCCGCAACCCATCTGCTCTCAGACGAATTATCTGACCTCAAGTATGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGGCATCTGTGGTTGTTACATCAGCAGGCGTCCACTCCTGCATCATACTTTCCACGATCTCACGCTaGGAGTTGAGGAAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LRASVVVTSAGVHSCIILSTISR*ELRKVK Trigger: CTTCACCTTCCTCAACTCCAAGCGTGAGATCGTGGA...AAGTATGATGCAGGAGTGGACGCCTGCTGATGTAACAACCACAGATGCCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 |
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| CDS-3UTR CAA 90 bp | TGGTACTCTCTTGTTTCCTTTTTCCCCATTTCCATGTGGATGTGTGGTGTGTGGACTTCTTCCTTGGGGTaGACCTGCTCCTCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: WYSLVSFFPISMWMCGVWTSSLG*TCSSSS Trigger: TGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAGT...CCACACACCACACATCCACATGGAAATGGGGAAAAAGGAAACAAGAGAGTACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093773.8 |
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| CDS-3UTR CAA 90 bp | CATCAGGGCCAGCTTGTCTCTTTTTGGTACTCAGAAATCACAAATTATTTTCCTTCCTTGAAGGGGACCTaGGCTTGGCTGGCCTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: HQGQLVSFWYSEITNYFPSLKGT*AWLASV Trigger: CACCGAGGCCAGCCAAGCCAAGGTCCCCTTCAAGGA...AGGAAAATAATTTGTGATTTCTGAGTACCAAAAAGAGACAAGCTGGCCCTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAACAAATATATGCCCTGCCAGTACTGTTAAGCCGTTTCTATGTAGCTATCTCACGCTTGGAGTaGAGGAAGGTGAAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LSKQIYALPVLLSRFYVAISRLE*RKVKGG Trigger: CCCACCCTTCACCTTCCTCAACTCCAAGCGTGAGAT...AGCTACATAGAAACGGCTTAACAGTACTGGCAGGGCATATATTTGTTTGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| CDS-3UTR CAA 90 bp | GGCCAATACTATGCTGGTAAATTAGTGACTTCCAGTCCTATGGATTGGCACAGATCCACGATCTCACGCTaGGAGTTGAGGAAGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GQYYAGKLVTSSPMDWHRSTISR*ELRKVK Trigger: CTTCACCTTCCTCAACTCCAAGCGTGAGATCGTGGA...TCTGTGCCAATCCATAGGACTGGAAGTCACTAATTTACCAGCATAGTATTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS-3UTR CAA 90 bp | ATTTACATTTCTTCCCTTTTCTCTCGTGTCAGGAACCATCACAAGGCAGACTCTACTTCTTCCTTGGGGTaGACCTGCTCCTCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: IYISSLFSRVRNHHKADSTSSLG*TCSSSS Trigger: TGAGGAGGAGGAGCAGGTCAACCCCAAGGAAGAAGT...AGAGTCTGCCTTGTGATGGTTCCTGACACGAGAGAAAAGGGAAGAAATGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174193.8 |
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| CDS CCA 72 bp | GGCTGGCGGCGCTCTGACCACCACTGGGGACGCAGCTaGCTGGTGCTTGGGCCTCTGAGGGGACGTGGCACG | + |
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Preference number: 6 (lower is better) Translates to: GWRRSDHHWGRS*LVLGPLRGRGT Trigger: CGTGCCACGTCCCCTCAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CAA 72 bp | CGCGGCTGGCGCTCAGTCCTTGAAGGGGACCTTGGCTaGGCTGGCCTCGGTGGGGACCTTGGCTTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RGWRSVLEGDLG*AGLGGDLGLAG Trigger: GCCAGCCAAGCCAAGGTCCCCACCGAGGCCAGCCAAGCCAAGGTCCCCTTCAAGGACTGAGCGCCAGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS TCA 72 bp | ACCACTGGGGACGCAGCTGGCTGGTGCTTGGGCCTCTaGGGGGACGTGGCACGGCGGCTAGTCTTCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TTGDAAGWCLGL*GDVARRLVFWQ Trigger: CTGCCAGAAGACTAGCCGCCGTGCCACGTCCCCTCAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | GGACTTTGGCTTGGCTGGCGGCGCTCTGACCACCACTaGGGACGCAGCTGGCTGGTGCTTGGGCCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GLWLGWRRSDHH*GRSWLVLGPLR Trigger: CCTCAGAGGCCCAAGCACCAGCCAGCTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCCAAGCCAAAGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | GCGGCTGGCGCTCAGTCCTTGAAGGGGACCTTGGCTTaGCTGGCCTCGGTGGGGACCTTGGCTTGGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AAGAQSLKGTLA*LASVGTLAWLA Trigger: TGCCAGCCAAGCCAAGGTCCCCACCGAGGCCAGCCAAGCCAAGGTCCCCTTCAAGGACTGAGCGCCAGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | CTGCTTAGACTTCTGAGGGGGCTTCTGCTTGGCTGGTaGTGGTCGGACCTCTGGGCGGGGACGCGGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLRLLRGLLLGW*WSDLWAGTRLA Trigger: CGCCAGCCGCGTCCCCGCCCAGAGGTCCGACCACCACCAGCCAAGCAGAAGCCCCCTCAGAAGTCTAAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | TGGCTTGGCTGGCATCAGAGGGGACTTTGGCTTGGCTaGCGGCGCTCTGACCACCACTGGGGACGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLGWHQRGLWLG*RRSDHHWGRSW Trigger: CCAGCTGCGTCCCCAGTGGTGGTCAGAGCGCCGCCAGCCAAGCCAAAGTCCCCTCTGATGCCAGCCAAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | GCTGGTGCCTGGCCCTCTGAGGGGGCTGCTGCGTGCTaGCTGCTTAGACTTCTGAGGGGGCTTCTGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: AGAWPSEGAAAC*LLRLLRGLLLG Trigger: GCCAAGCAGAAGCCCCCTCAGAAGTCTAAGCAGCCAGCACGCAGCAGCCCCCTCAGAGGGCCAGGCACCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | ACCTTGGCTTGGCTGGCCTCGGTGGGGACCTTGGCTTaGCTGGCATCAGAGGGGACTTTGGCTTGGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TLAWLASVGTLA*LASEGTLAWLA Trigger: CGCCAGCCAAGCCAAAGTCCCCTCTGATGCCAGCCAAGCCAAGGTCCCCACCGAGGCCAGCCAAGCCAAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CAA 72 bp | GACCTTGGCTTGGCTGGCCTCGGTGGGGACCTTGGCTaGGCTGGCATCAGAGGGGACTTTGGCTTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DLGLAGLGGDLG*AGIRGDFGLAG Trigger: GCCAGCCAAGCCAAAGTCCCCTCTGATGCCAGCCAAGCCAAGGTCCCCACCGAGGCCAGCCAAGCCAAGGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068698.15 |
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| CDS CCA 72 bp | GGGCAGCAGTGGATGCTGAAGTGCTCGGAGAACTTCTaGTTCTTGGAGAGCCTGGGGCCCTCCTTGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: GQQWMLKCSENF*FLESLGPSLAI Trigger: AATGGCCAAGGAGGGCCCCAGGCTCTCCAAGAACCAGAAGTTCTCCGAGCACTTCAGCATCCACTGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000068698.15 ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 ENSMUST00000214943.2 ENSMUST00000215512.2 |
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| CDS CCA 72 bp | GGGGTTGACCTGCTCCTCCTCCTCAATCTAGTCTTCTaGCAGGCACAGCAGATCCAGTCCTCCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GVDLLLLLNLVF*QAQQIQSSSFF Trigger: GAAGAAGGAGGAGGACTGGATCTGCTGTGCCTGCCAGAAGACTAGATTGAGGAGGAGGAGCAGGTCAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000093773.8 ENSMUST00000111627.3 ENSMUST00000174193.8 ENSMUST00000214943.2 |
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