Pregenerated sensors for MOB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025979Ensembl transcript IDs: ENSMUST00000159311.8, ENSMUST00000161122.2, ENSMUST00000162364.8
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGTGCGCCACCACCGCCCGGCTGCACTTAAATTCTTAAGACGATaGAATAAGAAATCAAAGTATGACCACTTATCAACACCACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: GVRHHRPAALKFLRR*NKKSKYDHLSTPLN Trigger: GTTAAGTGGTGTTGATAAGTGGTCATACTTTGATTTCTTATTTCATCGTCTTAAGAATTTAAGTGCAGCCGGGCGGTGGTGGCGCACGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| 3UTR GCA 90 bp | ACTAAGGGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTTGTaGCTTGTCACTGTCACCATGGACTTAATAATCCACTGTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: TKGNKRGQVHGTSRL*LVTVTMDLIIHCHK Trigger: TTTGTGACAGTGGATTATTAAGTCCATGGTGACAGTGACAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCCCTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| 3UTR CAA 90 bp | AGGACTAAGGGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTaGTGCCTTGTCACTGTCACCATGGACTTAATAATCCACTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RTKGNKRGQVHGTSR*CLVTVTMDLIIHCH Trigger: GTGACAGTGGATTATTAAGTCCATGGTGACAGTGACAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCCCTTAGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| 3UTR-3UTR GCA 90 bp | AATCACTACCGTAACTGTCCCCTGAGAAACAGTCAGATGACAGAAACCCACCGTGGAACATCACGTTTGTaGCTTGTCACTGTCACCATG | + |
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Preference number: 2 (lower is better) Translates to: NHYRNCPLRNSQMTETHRGTSRL*LVTVTM Trigger: CATGGTGACAGTGACAAGGCACAAACGTGATGTTCC...ACGGTGGGTTTCTGTCATCTGACTGTTTCTCAGGGGACAGTTACGGTAGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTAAGGGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTTGTGCCTTGCATTCGTTTATAGATTaGAAGGACTGGGGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: GLRETRGGKSMEHHVCALHSFID*KDWGPM Trigger: CATTGGACCCCAGTCCTTCCAATCTATAAACGAATG...CAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCCCTTAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| 3UTR CAA 90 bp | CTTCAGCTGTCCCAACTGCACAGGTCTCTATTCTGTCTTAGTGCCTaGTTACAGTGTGGCATAGAGACCTCAGCGTTTAATGAGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: LQLSQLHRSLFCLSA*LQCGIETSAFNEKL Trigger: GAGTTTCTCATTAAACGCTGAGGTCTCTATGCCACACTGTAACAAGGCACTAAGACAGAATAGAGACCTGTGCAGTTGGGACAGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| 3UTR-3UTR CCA 90 bp | AATCACTACCGTAACTGTCCCCTGAGAAACAGTCAGATGACAGAAACCCACCGTCCAAGTACACTGGCCTaGAGTACACTTTATGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: NHYRNCPLRNSQMTETHRPSTLA*STLYVG Trigger: TCCTACATAAAGTGTACTCCAGGCCAGTGTACTTGG...ACGGTGGGTTTCTGTCATCTGACTGTTTCTCAGGGGACAGTTACGGTAGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTTAGTACTTGTTAGGTGCTTGTGTGAAACACAAGCTCATTCGTTTATACCAAGTACACTGGCCTaGAGTACACTTTATGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLVLVRCLCETQAHSFIPSTLA*STLYVG Trigger: TCCTACATAAAGTGTACTCCAGGCCAGTGTACTTGG...TATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTTAGTACTTGTTAGGTGCTTGTGTGAAACACAAGCTCATTCGTTTATACATTCGTTTATAGATTaGAAGGACTGGGGTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: LSLVLVRCLCETQAHSFIHSFID*KDWGPM Trigger: CATTGGACCCCAGTCCTTCCAATCTATAAACGAATG...TATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159311.8 ENSMUST00000161122.2 ENSMUST00000162364.8 |
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| 3UTR CAA 90 bp | GATGAAAACAAAGCAAATATGCTGTCTTTAGTACTTGTTAGGTGCTaGTGTGAAACACAAGCTCATTCGTTTATAGATTGGAAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: DENKANMLSLVLVRC*CETQAHSFIDWKDW Trigger: CCAGTCCTTCCAATCTATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAGCATATTTGCTTTGTTTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159311.8 ENSMUST00000161122.2 ENSMUST00000162364.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTCTGAACATACACATAATCGTTATGCAGATCAAATGCTATAGACAGAACGTACATTGTTCTACGTaGTTCCTTCATGCTTCACTT | + |
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Preference number: 2 (lower is better) Translates to: VPLNIHIIVMQIKCYRQNVHCST*FLHASL Trigger: AAGTGAAGCATGAAGGAATCACGTAGAACAATGTAC...GTTCTGTCTATAGCATTTGATCTGCATAACGATTATGTGTATGTTCAGAGGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161122.2 |
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| 3UTR CAA 90 bp | GGCGTCAACTCTACACACACTCTCAGTGTGCTGTCATTTCCCAATTaGTCTGTGTATACTTGTCTTATAATACAATACAAATCATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GVNSTHTLSVLSFPN*SVYTCLIIQYKSFL Trigger: AAGAAATGATTTGTATTGTATTATAAGACAAGTATACACAGACAAATTGGGAAATGACAGCACACTGAGAGTGTGTGTAGAGTTGACGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| 3UTR GCA 72 bp | AACAAGAGGGGGCAAGTCCATGGAACATCACGTTTGTaGCTTGTCACTGTCACCATGGACTTAATAATCCAC | + |
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Preference number: 3 (lower is better) Translates to: NKRGQVHGTSRL*LVTVTMDLIIH Trigger: GTGGATTATTAAGTCCATGGTGACAGTGACAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| 3UTR GCA 72 bp | AACAAAGCAAATATGCTGTCTTTAGTACTTGTTAGGTaGTTGTGTGAAACACAAGCTCATTCGTTTATAGAT | + |
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Preference number: 3 (lower is better) Translates to: NKANMLSLVLVR*LCETQAHSFID Trigger: ATCTATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAGCATATTTGCTTTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159311.8 ENSMUST00000161122.2 ENSMUST00000162364.8 |
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| CDS-3UTR GCA 90 bp | GGACTAAGGGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTTGTGCCTTGAATCCTGCGCCTTGGTaGCTGGCCTGTTCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLRETRGGKSMEHHVCALNPAPW*LACSAS Trigger: TGAGGCGGAACAGGCCAGGCACCAAGGCGCAGGATT...CAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCCCTTAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| CDS-3UTR CCA 90 bp | AATCACTACCGTAACTGTCCCCTGAGAAACAGTCAGATGACAGAAACCCACCGTAGAAATCCTGCGCCTTaGTGCCTGGCCTGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: NHYRNCPLRNSQMTETHRRNPAP*CLACSA Trigger: GGCGGAACAGGCCAGGCACCAAGGCGCAGGATTTCT...ACGGTGGGTTTCTGTCATCTGACTGTTTCTCAGGGGACAGTTACGGTAGTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| CDS-3UTR GCA 90 bp | GTTCCTCTGAACATACACATAATCGTTATGCAGATCAAATGCTATAGACAGAACAATCCTGCGCCTTGGTaGCTGGCCTGTTCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VPLNIHIIVMQIKCYRQNNPAPW*LACSAS Trigger: TGAGGCGGAACAGGCCAGGCACCAAGGCGCAGGATT...GTTCTGTCTATAGCATTTGATCTGCATAACGATTATGTGTATGTTCAGAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161122.2 ENSMUST00000162364.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTTTAGTACTTGTTAGGTGCTTGTGTGAAACACAAGCTCATTCGTTTATAAGAAATCCTGCGCCTTaGTGCCTGGCCTGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSLVLVRCLCETQAHSFIRNPAP*CLACSA Trigger: GGCGGAACAGGCCAGGCACCAAGGCGCAGGATTTCT...TATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161122.2 ENSMUST00000162364.8 |
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| 3UTR CAA 72 bp | GGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTaGTGCCTTGTCACTGTCACCATGGACTTAATAATC | + |
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Preference number: 4 (lower is better) Translates to: GNKRGQVHGTSR*CLVTVTMDLII Trigger: GATTATTAAGTCCATGGTGACAGTGACAAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159311.8 ENSMUST00000162364.8 |
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| CDS-3UTR GCA 90 bp | CTGTCTTTAGTACTTGTTAGGTGCTTGTGTGAAACACAAGCTCATTCGTTTATATATACTGCGCCTTGGTaGCTGGCCTGTTCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSLVLVRCLCETQAHSFIYTAPW*LACSAS Trigger: TGAGGCGGAACAGGCCAGGCACCAAGGCGCAGTATA...TATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159311.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTTTAGTACTTGTTAGGTGCTTGTGTGAAACACAAGCTCATTCGTTTATAGAATATACTGCGCCTTaGTGCCTGGCCTGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSLVLVRCLCETQAHSFIEYTAP*CLACSA Trigger: GGCGGAACAGGCCAGGCACCAAGGCGCAGTATATTC...TATAAACGAATGAGCTTGTGTTTCACACAAGCACCTAACAAGTACTAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159311.8 |
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| 3UTR CAA 72 bp | TCCCAACTGCACAGGTCTCTATTCTGTCTTAGTGCCTaGTTACAGTGTGGCATAGAGACCTCAGCGTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: SQLHRSLFCLSA*LQCGIETSAFN Trigger: ATTAAACGCTGAGGTCTCTATGCCACACTGTAACAAGGCACTAAGACAGAATAGAGACCTGTGCAGTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162364.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTCTGAACATACACATAATCGTTATGCAGATCAAATGCTATAGACAGAACGGCAGAATTGCCTGCTaGACAGCAAGTGTACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VPLNIHIIVMQIKCYRQNGRIAC*TASVLS Trigger: GGACAGTACACTTGCTGTTCAGCAGGCAATTCTGCC...GTTCTGTCTATAGCATTTGATCTGCATAACGATTATGTGTATGTTCAGAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161122.2 |
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| CDS-3UTR CAA 90 bp | AGGACTAAGGGAAACAAGAGGGGGCAAGTCCATGGAACATCACGTTTGTGCCTTTGCCCTTATGTTCTGTaGAATATACTGCGCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: RTKGNKRGQVHGTSRLCLCPYVL*NILRLG Trigger: ACCAAGGCGCAGTATATTCAACAGAACATAAGGGCA...AAGGCACAAACGTGATGTTCCATGGACTTGCCCCCTCTTGTTTCCCTTAGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159311.8 |
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