Pregenerated sensors for MOB3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028709Ensembl transcript IDs: ENSMUST00000030477.4, ENSMUST00000148409.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCGAACCTACCTCTGCCTCCTAAGTGCTGAGATTAAAGGTGTGTaGCACCACTGCCAGGCTCATAGGCTTAATGATATCAGGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: DRTYLCLLSAEIKGV*HHCQAHRLNDIRPC Trigger: GCAGGGCCTGATATCATTAAGCCTATGAGCCTGGCAGTGGTGGCACACACCTTTAATCTCAGCACTTAGGAGGCAGAGGTAGGTTCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 90 bp | CCCTTTTCACAGCCTAGATTTCAGAATATATTCTGCAGCCCACCGTaGGGGGAATCTCCCACTGTCCTCAGTTCTGAGACATTGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PFSQPRFQNIFCSPP*GESPTVLSSETLPK Trigger: CTTTGGCAATGTCTCAGAACTGAGGACAGTGGGAGATTCCCCCCACGGTGGGCTGCAGAATATATTCTGAAATCTAGGCTGTGAAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 90 bp | TGGAACCCTCCCTTCTTCATGCATTCTAGGATGCAGACAGACTTCTaGGAAGTCCAGAGGTGTTGGGTCTATAGAGGGTTCCTACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: WNPPFFMHSRMQTDF*EVQRCWVYRGFLLL Trigger: TAAGAGTAGGAACCCTCTATAGACCCAACACCTCTGGACTTCTCAGAAGTCTGTCTGCATCCTAGAATGCATGAAGAAGGGAGGGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 90 bp | AAACTCCTTTTCTTCTGTGGCCCACTTGGAACCCTCCCTTCTTCATaGATTCTAGGATGCAGACAGACTTCTGAGAAGTCCAGAGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: KLLFFCGPLGTLPSS*ILGCRQTSEKSRGV Trigger: AACACCTCTGGACTTCTCAGAAGTCTGTCTGCATCCTAGAATGCATGAAGAAGGGAGGGTTCCAAGTGGGCCACAGAAGAAAAGGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 90 bp | AAACAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTTGCACATaGATCTTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: KQLCPGECLTASICT*ILVLQSAGPRVEVK Trigger: CTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 90 bp | AAGCAGAAACAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTTaGACATGCATCTTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: KQKQLCPGECLTASI*TCILVLQSAGPRVE Trigger: TTCTACTCTAGGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGTTTCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 90 bp | CATTCAAGTTCCAGTGGCTCCCTGGTCTGGAGGGCTATTTTGTGCTaGCCTTCAGTCATGTCAGTAGATTCTGGGTTTGAGATTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: HSSSSGSLVWRAILC*PSVMSVDSGFEIEV Trigger: TACTTCAATCTCAAACCCAGAATCTACTGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 90 bp | ATTCATTCAAGTTCCAGTGGCTCCCTGGTCTGGAGGGCTATTTTGTaGTGGCCTTCAGTCATGTCAGTAGATTCTGGGTTTGAGATTGAA | + |
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Preference number: 1 (lower is better) Translates to: IHSSSSGSLVWRAIL*WPSVMSVDSGFEIE Trigger: TTCAATCTCAAACCCAGAATCTACTGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 90 bp | AATTTCCTCCAATGCATATTGAGAGACAGAGACAATATTCTTATGTaGCTTCTTGCCCTCCTGGCCTCTCAGGATAAAGGCTCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: NFLQCILRDRDNILM*LLALLASQDKGSGR Trigger: CCTTCCAGAGCCTTTATCCTGAGAGGCCAGGAGGGCAAGAAGTCACATAAGAATATTGTCTCTGTCTCTCAATATGCATTGGAGGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 90 bp | AAATTGGATTCTTCAATTCATTCAAGTTCCAGTGGCTCCCTGGTCTaGAGGGCTATTTTGTGCTGGCCTTCAGTCATGTCAGTAGATTCT | + |
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Preference number: 1 (lower is better) Translates to: KLDSSIHSSSSGSLV*RAILCWPSVMSVDS Trigger: AGAATCTACTGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATGAATTGAAGAATCCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 90 bp | TACATCCATCATCTATCCATCCATAATGAGAGCCTACTATGTGTCTaGAAGGACCTAGATCTCTCAGACAAATCCCACAATCACACACAC | + |
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Preference number: 1 (lower is better) Translates to: YIHHLSIHNESLLCV*KDLDLSDKSHNHTH Trigger: GTGTGTGTGATTGTGGGATTTGTCTGAGAGATCTAGGTCCTTCCAGACACATAGTAGGCTCTCATTATGGATGGATAGATGATGGATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCAGCCTGTTTCCCTTGGGGACTTTTCTGGAGCCAGCAGACATCCCAGGTGGTGTGTGCCACCACTaGCAGGCTCATAGGCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: QASLFPLGTFLEPADIPGGVCHH*QAHRLN Trigger: ATTAAGCCTATGAGCCTGGCAGTGGTGGCACACACC...ACCTGGGATGTCTGCTGGCTCCAGAAAAGTCCCCAAGGGAAACAGGCTGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGGACCCTGAGGGATCAATCCCAACCCTCAAGAGGCTGACCATATGTTTGTGCAGATGGTCCATCTaGCAGGCAACAGCATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PGDPEGSIPTLKRLTICLCRWSI*QATASR Trigger: TCTGGATGCTGTTGCCTGTCAGATGGACCATCTGCA...CAAACATATGGTCAGCCTCTTGAGGGTTGGGATTGATCCCTCAGGGTCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCAGCCTGTTTCCCTTGGGGACTTTTCTGGAGCCAGCAGACATCCCAGGTGAAGTCCAGAGGTGTTaGGTCTATAGAGGGTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: QASLFPLGTFLEPADIPGEVQRC*VYRGFL Trigger: TAGGAACCCTCTATAGACCCAACACCTCTGGACTTC...ACCTGGGATGTCTGCTGGCTCCAGAAAAGTCCCCAAGGGAAACAGGCTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTGGCCTCTCAGGATAAAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCCTTCTGTGGCCCACTTaGAACCCTCCCTTCTTCATG | + |
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Preference number: 2 (lower is better) Translates to: PSWPLRIKALEGQKPISALLWPT*NPPFFM Trigger: CATGAAGAAGGGAGGGTTCCAAGTGGGCCACAGAAG...GGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTTTATCCTGAGAGGCCAGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR TCA 90 bp | CCTATTTCTGCCGGTTTCCCTGCCTGTGAGTCTGTGCAGAGGGCTCAGCATGGACAACCCTCAAGAGGCTaGCCATATGTTTGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PISAGFPACESVQRAQHGQPSRG*PYVCLF Trigger: AAACAAGCAAACATATGGTCAGCCTCTTGAGGGTTG...TCCATGCTGAGCCCTCTGCACAGACTCACAGGCAGGGAAACCGGCAGAAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGACCCTGAGGGATCAATCCCAACCCTCAAGAGGCTGACCATATGTTTGAGAACCCTGGTAGCCTaGCCTACTCTTGGACTTAAT | + |
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Preference number: 2 (lower is better) Translates to: PGDPEGSIPTLKRLTICLRTLVA*PTLGLN Trigger: ATTAAGTCCAAGAGTAGGGCAGGCTACCAGGGTTCT...CAAACATATGGTCAGCCTCTTGAGGGTTGGGATTGATCCCTCAGGGTCCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCAGGGTGTGGTAGGGCTTTGTGGCATCAGGCTAGAAATCCTTACTCAATCTTATGTGACTTCTTaGCCTCCTGGCCTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGQGVVGLCGIRLEILTQSYVTS*PPGLSG Trigger: TCCTGAGAGGCCAGGAGGGCAAGAAGTCACATAAGA...TTGAGTAAGGATTTCTAGCCTGATGCCACAAAGCCCTACCACACCCTGGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR TCA 90 bp | AGGATAAAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCGGTTTCCCTGCCTGTATGCAGACAGACTTCTaGGAAGTCCAGAGGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: RIKALEGQKPISAGFPACMQTDF*EVQRCW Trigger: CCAACACCTCTGGACTTCTCAGAAGTCTGTCTGCAT...ACAGGCAGGGAAACCGGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTTTATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCCAGGGTGTGGTAGGGCTTTGTGGCATCAGGCTAGAAATCCTTACTCAAACACACACACACACTTaGTTACTCAGGAACAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PGQGVVGLCGIRLEILTQTHTHT*LLRNRH Trigger: GTGCCTGTTCCTGAGTAAGCAAGTGTGTGTGTGTGT...TTGAGTAAGGATTTCTAGCCTGATGCCACAAAGCCCTACCACACCCTGGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTGTGGTCCCTTTTCACAGCCTAGATTTCAGAATATATTCTGCAGCCCACCTCTGTAGACCAGGCTaGCCTCGAACTCAGAGATCG | + |
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Preference number: 2 (lower is better) Translates to: SPVVPFHSLDFRIYSAAHLCRPG*PRTQRS Trigger: CGATCTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG...GTGGGCTGCAGAATATATTCTGAAATCTAGGCTGTGAAAAGGGACCACAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTGGCCTCTCAGGATAAAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCTGGATAGCTGTGGCTTaGAAATCCAAGAAGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PSWPLRIKALEGQKPISAWIAVA*KSKKPE Trigger: TTCAGGCTTCTTGGATTTCCAAGCCACAGCTATCCA...GGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTTTATCCTGAGAGGCCAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCAGGGTGTGGTAGGGCTTTGTGGCATCAGGCTAGAAATCCTTACTCAATTTGCACATGCATCTTaGTGTTGCAATCAGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGQGVVGLCGIRLEILTQFAHAS*CCNQQA Trigger: GGCCTGCTGATTGCAACACCAAGATGCATGTGCAAA...TTGAGTAAGGATTTCTAGCCTGATGCCACAAAGCCCTACCACACCCTGGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 90 bp | CACACTTGCTTACTCAGGAACAGGCACTCACTCTCTATAATTTTCTaGCCAGCACTCAGCCACATCCTTATTCCCCCATGGAGTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HTCLLRNRHSLSIIF*PALSHILIPPWSWE Trigger: TTCCCAACTCCATGGGGGAATAAGGATGTGGCTGAGTGCTGGCAAGAAAATTATAGAGAGTGAGTGCCTGTTCCTGAGTAAGCAAGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 90 bp | GCTGGGCCGAGGCAGGTGTTTTTAGGATGGGAAGGTCTCCATCAGTaGCATGATCCTCAGTGTCCTGAGATAGAAGAAAATTGGATTCTT | + |
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Preference number: 2 (lower is better) Translates to: AGPRQVFLGWEGLHQ*HDPQCPEIEENWIL Trigger: AAGAATCCAATTTTCTTCTATCTCAGGACACTGAGGATCATGCAACTGATGGAGACCTTCCCATCCTAAAAACACCTGCCTCGGCCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 90 bp | TCAATTCATTCAAGTTCCAGTGGCTCCCTGGTCTGGAGGGCTATTTaGTGCTGGCCTTCAGTCATGTCAGTAGATTCTGGGTTTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: SIHSSSSGSLVWRAI*CWPSVMSVDSGFEI Trigger: AATCTCAAACCCAGAATCTACTGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATGAATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGAAACAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTTGCACATGCACACATGGTCAGAGTTaGGTCACTAAGCTGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: KQKQLCPGECLTASICTCTHGQS*VTKLSL Trigger: TAATGACAGCTTAGTGACCCAACTCTGACCATGTGT...GCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGTTTCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAAGTCAAGAGCTTTGAATTTTTATGGAGGGCTATTTTGTaGTGGCCTTCAGTCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: LVLQSAGPRVEVKSFEFLWRAIL*WPSVMS Trigger: TGACATGACTGAAGGCCAGCACAAAATAGCCCTCCA...TAAAAATTCAAAGCTCTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | TTTACCGGTTTCAATTTCCTCCAATGCATATTGAGAGACAGAGACAATATTCTTAGTGGCTCCCTGGTCTaGAGGGCTATTTTGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FTGFNFLQCILRDRDNILSGSLV*RAILCW Trigger: CCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACT...AAGAATATTGTCTCTGTCTCTCAATATGCATTGGAGGAAATTGAAACCGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAAGTCAAGAGCTTTGAATTTTTAAGGGCTATTTTGTGCTaGCCTTCAGTCATGTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LVLQSAGPRVEVKSFEFLRAILC*PSVMSV Trigger: TACTGACATGACTGAAGGCCAGCACAAAATAGCCCT...TAAAAATTCAAAGCTCTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR GCA 90 bp | TTTACCGGTTTCAATTTCCTCCAATGCATATTGAGAGACAGAGACAATATTCTTGAGATTAAAGGTGTGTaGCACCACTGCCAGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: FTGFNFLQCILRDRDNILEIKGV*HHCQAH Trigger: ATGAGCCTGGCAGTGGTGGCACACACCTTTAATCTC...AAGAATATTGTCTCTGTCTCTCAATATGCATTGGAGGAAATTGAAACCGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | AGACATTGCCAAAGCTGCAGGCCAGCCTGTTTCCCTTaGGGACTTTTCTGGAGCCAGCAGACATCCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RHCQSCRPACFP*GLFWSQQTSQV Trigger: GACCTGGGATGTCTGCTGGCTCCAGAAAAGTCCCCAAGGGAAACAGGCTGGCCTGCAGCTTTGGCAATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 72 bp | TCTCTGGATAGCTGTGGCTTGGAAATCCAAGAAGCCTaGATGTATCAGGAGGCTGGGCCGAGGCAGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SLDSCGLEIQEA*MYQEAGPRQVF Trigger: AAACACCTGCCTCGGCCCAGCCTCCTGATACATTCAGGCTTCTTGGATTTCCAAGCCACAGCTATCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | AGTTCCAGTGGCTCCCTGGTCTGGAGGGCTATTTTGTaGTGGCCTTCAGTCATGTCAGTAGATTCTGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SSSGSLVWRAIL*WPSVMSVDSGF Trigger: AAACCCAGAATCTACTGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | AACCTATTTCTGCCGGTTTCCCTGCCTGTGAGTCTGTaGAGAGGGCTCAGCATGGAGGTATTAAGTAATGGC | + |
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Preference number: 3 (lower is better) Translates to: NLFLPVSLPVSL*RGLSMEVLSNG Trigger: GCCATTACTTAATACCTCCATGCTGAGCCCTCTGCACAGACTCACAGGCAGGGAAACCGGCAGAAATAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | CAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTTaGACATGCATCTTGGTGTTGCAATCAGCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QLCPGECLTASI*TCILVLQSAGP Trigger: AGGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | CTTGGAAATCCAAGAAGCCTGAATGTATCAGGAGGCTaGGCCGAGGCAGGTGTTTTTAGGATGGGAAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LGNPRSLNVSGG*AEAGVFRMGRS Trigger: AGACCTTCCCATCCTAAAAACACCTGCCTCGGCCCAGCCTCCTGATACATTCAGGCTTCTTGGATTTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | CAGCCTAGATTTCAGAATATATTCTGCAGCCCACCGTaGGGGGAATCTCCCACTGTCCTCAGTTCTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: QPRFQNIFCSPP*GESPTVLSSET Trigger: TGTCTCAGAACTGAGGACAGTGGGAGATTCCCCCCACGGTGGGCTGCAGAATATATTCTGAAATCTAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCGGTTTCCCTGCCTGTGAGTCTCTCTCTATAATTTTCTaGCCAGCACTCAGCCACATC | + |
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Preference number: 3 (lower is better) Translates to: KALEGQKPISAGFPACESLSIIF*PALSHI Trigger: GATGTGGCTGAGTGCTGGCAAGAAAATTATAGAGAG...AGACTCACAGGCAGGGAAACCGGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | TTCTTCTGTGGCCCACTTGGAACCCTCCCTTCTTCATaGATTCTAGGATGCAGACAGACTTCTGAGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: FFCGPLGTLPSS*ILGCRQTSEKS Trigger: GGACTTCTCAGAAGTCTGTCTGCATCCTAGAATGCATGAAGAAGGGAGGGTTCCAAGTGGGCCACAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | TGTCCTGGAGAGTGTCTGACAGCCTCTATTTGCACATaGATCTTGGTGTTGCAATCAGCAGGCCCTAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: CPGECLTASICT*ILVLQSAGPRV Trigger: TACTCTAGGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CAA 90 bp | CCTATTTCTGCCGGTTTCCCTGCCTGTGAGTCTGTGCAGAGGGCTCAGCATGGATCTATACACACACATTaGTACACTTGTACACATGGT | + |
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Preference number: 3 (lower is better) Translates to: PISAGFPACESVQRAQHGSIHTH*YTCTHG Trigger: ACCATGTGTACAAGTGTACAAATGTGTGTGTATAGA...TCCATGCTGAGCCCTCTGCACAGACTCACAGGCAGGGAAACCGGCAGAAATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 72 bp | CCCTTCTTCATGCATTCTAGGATGCAGACAGACTTCTaGGAAGTCCAGAGGTGTTGGGTCTATAGAGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PFFMHSRMQTDF*EVQRCWVYRGF Trigger: GAACCCTCTATAGACCCAACACCTCTGGACTTCTCAGAAGTCTGTCTGCATCCTAGAATGCATGAAGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR GCA 72 bp | TACCTCTGCCTCCTAAGTGCTGAGATTAAAGGTGTGTaGCACCACTGCCAGGCTCATAGGCTTAATGATATC | + |
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Preference number: 3 (lower is better) Translates to: YLCLLSAEIKGV*HHCQAHRLNDI Trigger: GATATCATTAAGCCTATGAGCCTGGCAGTGGTGGCACACACCTTTAATCTCAGCACTTAGGAGGCAGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | TCTTCAATTCATTCAAGTTCCAGTGGCTCCCTGGTCTaGAGGGCTATTTTGTGCTGGCCTTCAGTCATGTCA | + |
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Preference number: 3 (lower is better) Translates to: SSIHSSSSGSLV*RAILCWPSVMS Trigger: TGACATGACTGAAGGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATGAATTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 72 bp | ACTCAAAGCAGAAACAGTTGTGTCCTGGAGAGTGTCTaGCAGCCTCTATTTGCACATGCATCTTGGTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: TQSRNSCVLESV*QPLFAHASWCC Trigger: GCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGTTTCTGCTTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | ACAGAGACAATATTCTTATGTGACTTCTTGCCCTCCTaGCCTCTCAGGATAAAGGCTCTGGAAGGGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: TETIFLCDFLPS*PLRIKALEGQK Trigger: TTTCTGCCCTTCCAGAGCCTTTATCCTGAGAGGCCAGGAGGGCAAGAAGTCACATAAGAATATTGTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAAGTCAAGAGCTTTGAATTTTTATTCTTATGTGACTTCTaGCCCTCCTGGCCTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LVLQSAGPRVEVKSFEFLFLCDF*PSWPLR Trigger: CCTGAGAGGCCAGGAGGGCAAGAAGTCACATAAGAA...TAAAAATTCAAAGCTCTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | AAGAAAATTGGATTCTTCAATTCATTCAAGTTCCAGTaGCTCCCTGGTCTGGAGGGCTATTTTGTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: KKIGFFNSFKFQ*LPGLEGYFVLA Trigger: GGCCAGCACAAAATAGCCCTCCAGACCAGGGAGCCACTGGAACTTGAATGAATTGAAGAATCCAATTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 72 bp | CAATGCATATTGAGAGACAGAGACAATATTCTTATGTaGCTTCTTGCCCTCCTGGCCTCTCAGGATAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: QCILRDRDNILM*LLALLASQDKG Trigger: GCCTTTATCCTGAGAGGCCAGGAGGGCAAGAAGTCACATAAGAATATTGTCTCTGTCTCTCAATATGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | CATCTATCCATCCATAATGAGAGCCTACTATGTGTCTaGAAGGACCTAGATCTCTCAGACAAATCCCACAAT | + |
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Preference number: 3 (lower is better) Translates to: HLSIHNESLLCV*KDLDLSDKSHN Trigger: ATTGTGGGATTTGTCTGAGAGATCTAGGTCCTTCCAGACACATAGTAGGCTCTCATTATGGATGGATAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CCA 72 bp | CACACACATTTGTACACTTGTACACATGGTCAGAGTTaGGTCACTAAGCTGTCATTACTCCTAAAATGGTCA | + |
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Preference number: 3 (lower is better) Translates to: HTHLYTCTHGQS*VTKLSLLLKWS Trigger: TGACCATTTTAGGAGTAATGACAGCTTAGTGACCCAACTCTGACCATGTGTACAAGTGTACAAATGTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR TCA 72 bp | GAATTTTTACCGGTTTCAATTTCCTCCAATGCATATTaGGAGACAGAGACAATATTCTTATGTGACTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: EFLPVSISSNAY*ETETIFLCDFL Trigger: CAAGAAGTCACATAAGAATATTGTCTCTGTCTCTCAATATGCATTGGAGGAAATTGAAACCGGTAAAAATTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | CCAGGTCCTGCTGCCCCGGAGAGCCCCACTGTTTCTTaGGAAGGCAGGCAGTTCCTCAGCCATAAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PGPAAPESPTVS*EGRQFLSHKKG Trigger: CCCCTTCTTATGGCTGAGGAACTGCCTGCCTTCCAAAGAAACAGTGGGGCTCTCCGGGGCAGCAGGACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CCA 90 bp | GACCAGGCTGGCCTCGAACTCAGAGATCGAACCTACCTCTGCCTCCTAAGTGCTCCCACCAGCCATGACTaGGCAGCTGCTCTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: DQAGLELRDRTYLCLLSAPTSHD*AAALTA Trigger: TGCAGTGAGAGCAGCTGCCCAGTCATGGCTGGTGGG...AGCACTTAGGAGGCAGAGGTAGGTTCGATCTCTGAGTTCGAGGCCAGCCTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR TCA 90 bp | AAGCAGAAACAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTTGCACATGCGCGGGCCTTCGGTACTaGCGCTCGTCCTGCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: KQKQLCPGECLTASICTCAGLRY*RSSCQR Trigger: CCGCTGGCAGGACGAGCGTCAGTACCGAAGGCCCGC...GCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGTTTCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR TCA 90 bp | CCAGGCCAGGGTGTGGTAGGGCTTTGTGGCATCAGGCTAGAAATCCTTACTCAACATATAGCGGGGTGCTaGGAGCTTGGCGGGCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: PGQGVVGLCGIRLEILTQHIAGC*ELGGPS Trigger: CGAAGGCCCGCCAAGCTCTCAGCACCCCGCTATATG...TTGAGTAAGGATTTCTAGCCTGATGCCACAAAGCCCTACCACACCCTGGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR TCA 90 bp | GACCAGGCTGGCCTCGAACTCAGAGATCGAACCTACCTCTGCCTCCTAAGTGCTCCTCGATCCAGTCCATaGGCAATGCCATATAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: DQAGLELRDRTYLCLLSAPRSSP*AMPYSG Trigger: CCCGCTATATGGCATTGCTCATGGACTGGATCGAGG...AGCACTTAGGAGGCAGAGGTAGGTTCGATCTCTGAGTTCGAGGCCAGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR GCA 90 bp | AGGATAAAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCGGTTTCCCTGCCTGTGCTCAAAGCGCTGTGTaGCAGGCTCGAAGCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RIKALEGQKPISAGFPACAQSAV*QARSAS Trigger: GGAAGCGCTTCGAGCCTGGCACACAGCGCTTTGAGC...ACAGGCAGGGAAACCGGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTTTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CCA 90 bp | CCAGGGGACCCTGAGGGATCAATCCCAACCCTCAAGAGGCTGACCATATGTTTGCCTGCTGGAAGTTCTTaGGGAAGGGAACTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: PGDPEGSIPTLKRLTICLPAGSS*GRELPH Trigger: GTGTGGGAGTTCCCTTCCCCAAGAACTTCCAGCAGG...CAAACATATGGTCAGCCTCTTGAGGGTTGGGATTGATCCCTCAGGGTCCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR TCA 90 bp | CCTATTTCTGCCGGTTTCCCTGCCTGTGAGTCTGTGCAGAGGGCTCAGCATGGACAGGCCGGACTTGAGTaGAGCTTGTGCCTTCTTATA | + |
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Preference number: 4 (lower is better) Translates to: PISAGFPACESVQRAQHGQAGLE*SLCLLI Trigger: TATAAGAAGGCACAAGCTTCACTCAAGTCCGGCCTG...TCCATGCTGAGCCCTCTGCACAGACTCACAGGCAGGGAAACCGGCAGAAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | CAGCCATCTCTAGCCAGGCCAGGGTGTGGTAGGGCTTaGTGGCATCAGGCTAGAAATCCTTACTCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPSLARPGCGRA*WHQARNPYSKQ Trigger: CTGCTTTGAGTAAGGATTTCTAGCCTGATGCCACAAAGCCCTACCACACCCTGGCCTGGCTAGAGATGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CCA 90 bp | AGGATAAAGGCTCTGGAAGGGCAGAAACCTATTTCTGCCGGTTTCCCTGCCTGTTTGGTGCAGACCTGCTaGAAGTTCTTGGGGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RIKALEGQKPISAGFPACLVQTC*KFLGKG Trigger: TCCCTTCCCCAAGAACTTCCAGCAGGTCTGCACCAA...ACAGGCAGGGAAACCGGCAGAAATAGGTTTCTGCCCTTCCAGAGCCTTTATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | ACAGTTGTGTCCTGGAGAGTGTCTGACAGCCTCTATTaGCACATGCATCTTGGTGTTGCAATCAGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TVVSWRVSDSLY*HMHLGVAISRP Trigger: GGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACACTCTCCAGGACACAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR GCA 90 bp | ACACACATTTGTACACTTGTACACATGGTCAGAGTTGGGTCACTAAGCTGTCATGGCAGCTGCTCTCACTaGAGTGCTCAGCCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: THICTLVHMVRVGSLSCHGSCSH*SAQPWC Trigger: GCACCATGGCTGAGCACTGCAGTGAGAGCAGCTGCC...ATGACAGCTTAGTGACCCAACTCTGACCATGTGTACAAGTGTACAAATGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR GCA 90 bp | GGTCAGAGGTTTAAGGAACTCAGGGCAAAGCTGCACTGTCTAACCTCCACTCAAATCTTGGTGCAGACCTaGTGGAAGTTCTTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQRFKELRAKLHCLTSTQILVQT*WKFLGK Trigger: CTTCCCCAAGAACTTCCAGCAGGTCTGCACCAAGAT...TTGAGTGGAGGTTAGACAGTGCAGCTTTGCCCTGAGTTCCTTAAACCTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | GCCAGCACTCAGCCACATCCTTATTCCCCCATGGAGTaGGGAACTGTCATGGTAGAGTGTAAGGTTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: ASTQPHPYSPME*GTVMVECKVEI Trigger: TATTTCAACCTTACACTCTACCATGACAGTTCCCAACTCCATGGGGGAATAAGGATGTGGCTGAGTGCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | TGTCTGACAGCCTCTATTTGCACATGCATCTTGGTGTaGCAATCAGCAGGCCCTAGAGTAGAAGTCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CLTASICTCILV*QSAGPRVEVKS Trigger: GCTCTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAAGATGCATGTGCAAATAGAGGCTGTCAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CCA 90 bp | ACACACACTTGCTTACTCAGGAACAGGCACTCACTCTCTATAATTTTCTTGCCATGTCATCTCCCTCAGTaGCTCCAGTTCCCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: THTCLLRNRHSLSIIFLPCHLPQ*LQFPLV Trigger: GACCAGAGGGAACTGGAGCCACTGAGGGAGATGACA...TGGCAAGAAAATTATAGAGAGTGAGTGCCTGTTCCTGAGTAAGCAAGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CCA 90 bp | TTGGTGTTGCAATCAGCAGGCCCTAGAGTAGAAGTCAAGAGCTTTGAATTTTTAGTCGGGTCAGGATCTTaGTGCAGACCTGCTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LVLQSAGPRVEVKSFEFLVGSGS*CRPAGS Trigger: ACTTCCAGCAGGTCTGCACCAAGATCCTGACCCGAC...TAAAAATTCAAAGCTCTTGACTTCTACTCTAGGGCCTGCTGATTGCAACACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | TTACTCAGGAACAGGCACTCACTCTCTATAATTTTCTaGCCAGCACTCAGCCACATCCTTATTCCCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LLRNRHSLSIIF*PALSHILIPPW Trigger: CCATGGGGGAATAAGGATGTGGCTGAGTGCTGGCAAGAAAATTATAGAGAGTGAGTGCCTGTTCCTGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | AGGCAGGTGTTTTTAGGATGGGAAGGTCTCCATCAGTaGCATGATCCTCAGTGTCCTGAGATAGAAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: RQVFLGWEGLHQ*HDPQCPEIEEN Trigger: ATTTTCTTCTATCTCAGGACACTGAGGATCATGCAACTGATGGAGACCTTCCCATCCTAAAAACACCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR GCA 90 bp | TTTACCGGTTTCAATTTCCTCCAATGCATATTGAGAGACAGAGACAATATTCTTGGGTCAGGATCTTGGTaGAGACCTGCTGGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FTGFNFLQCILRDRDNILGSGSW*RPAGSS Trigger: AGAACTTCCAGCAGGTCTGCACCAAGATCCTGACCC...AAGAATATTGTCTCTGTCTCTCAATATGCATTGGAGGAAATTGAAACCGGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| 3UTR CAA 72 bp | AGATTCAGAGGTACAATTCCATCTATACACACACATTaGTACACTTGTACACATGGTCAGAGTTGGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: RFRGTIPSIHTH*YTCTHGQSWVT Trigger: AGTGACCCAACTCTGACCATGTGTACAAGTGTACAAATGTGTGTGTATAGATGGAATTGTACCTCTGAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS TCA 90 bp | CCCCAGGCGGCAGCCTCACCACACTCCGAAGGTCCAGGCCGGACTTaGGTGAAGCTTGTGCCTTCTTATATAGCTCAAAGCGCTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PQAAASPHSEGPGRT*VKLVPSYIAQSAVC Trigger: GCACACAGCGCTTTGAGCTATATAAGAAGGCACAAGCTTCACTCAAGTCCGGCCTGGACCTTCGGAGTGTGGTGAGGCTGCCGCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030477.4 ENSMUST00000148409.2 |
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| CDS-3UTR CAA 90 bp | GAACTCAGAGATCGAACCTACCTCTGCCTCCTAAGTGCTGAGATTAAAGGTGTGAGGTCCAGGCCGGACTaGAGTGAAGCTTGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ELRDRTYLCLLSAEIKGVRSRPD*SEACAF Trigger: GAAGGCACAAGCTTCACTCAAGTCCGGCCTGGACCT...CACACCTTTAATCTCAGCACTTAGGAGGCAGAGGTAGGTTCGATCTCTGAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CAA 90 bp | TCCCCTGTGGTCCCTTTTCACAGCCTAGATTTCAGAATATATTCTGCAGCCCACAGTCGGGTCAGGATCTaGGTGCAGACCTGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVVPFHSLDFRIYSAAHSRVRI*VQTCWK Trigger: CTTCCAGCAGGTCTGCACCAAGATCCTGACCCGACT...GTGGGCTGCAGAATATATTCTGAAATCTAGGCTGTGAAAAGGGACCACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS-3UTR CAA 90 bp | GAACTCAGAGATCGAACCTACCTCTGCCTCCTAAGTGCTGAGATTAAAGGTGTGACCTGCTGGAAGTTCTaGGGGAAGGGAACTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ELRDRTYLCLLSAEIKGVTCWKF*GKGTPT Trigger: TGTGGGAGTTCCCTTCCCCAAGAACTTCCAGCAGGT...CACACCTTTAATCTCAGCACTTAGGAGGCAGAGGTAGGTTCGATCTCTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS TCA 72 bp | GATCCAGTCCATGAGCAATGCCATATAGCGGGGTGCTaGGAGCTTGGCGGGCCTTCGGTACTGACGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: DPVHEQCHIAGC*ELGGPSVLTLV Trigger: GACGAGCGTCAGTACCGAAGGCCCGCCAAGCTCTCAGCACCCCGCTATATGGCATTGCTCATGGACTGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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| CDS CAA 72 bp | GTGCCAGGCTCGAAGCGCTTCCGGGGCCGGAAAGTCTaGTCCTTCGCAAACACCTGTTTCAGACACAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPGSKRFRGRKV*SFANTCFRHSA Trigger: GGCACTGTGTCTGAAACAGGTGTTTGCGAAGGACAAGACTTTCCGGCCCCGGAAGCGCTTCGAGCCTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030477.4 ENSMUST00000148409.2 |
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| CDS CAA 90 bp | TCCCCAGGCGGCAGCCTCACCACACTCCGAAGGTCCAGGCCGGACTaGAGTGAAGCTTGTGCCTTCTTATATAGCTCAAAGCGCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPGGSLTTLRRSRPD*SEACAFLYSSKRCV Trigger: CACACAGCGCTTTGAGCTATATAAGAAGGCACAAGCTTCACTCAAGTCCGGCCTGGACCTTCGGAGTGTGGTGAGGCTGCCGCCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030477.4 ENSMUST00000148409.2 |
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| CDS GCA 72 bp | AAGCTTGTGCCTTCTTATATAGCTCAAAGCGCTGTGTaGCAGGCTCGAAGCGCTTCCGGGGCCGGAAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KLVPSYIAQSAV*QARSASGAGKS Trigger: AGACTTTCCGGCCCCGGAAGCGCTTCGAGCCTGGCACACAGCGCTTTGAGCTATATAAGAAGGCACAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030477.4 ENSMUST00000148409.2 |
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| CDS TCA 72 bp | GCAGCCTCACCACACTCCGAAGGTCCAGGCCGGACTTaGGTGAAGCTTGTGCCTTCTTATATAGCTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AASPHSEGPGRT*VKLVPSYIAQS Trigger: GCTTTGAGCTATATAAGAAGGCACAAGCTTCACTCAAGTCCGGCCTGGACCTTCGGAGTGTGGTGAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030477.4 ENSMUST00000148409.2 |
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| CDS CAA 72 bp | GGAACTCCCACACGTGTAGGAAAGACATCCTCATCATaGATGAGACCCTCGATCCAGTCCATGAGCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: GTPTRVGKTSSS*MRPSIQSMSNA Trigger: GGCATTGCTCATGGACTGGATCGAGGGTCTCATCAATGATGAGGATGTCTTTCCTACACGTGTGGGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030477.4 |
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