Pregenerated sensors for MOB3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073910Ensembl transcript IDs: ENSMUST00000102975.10
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCCAGTAAAGCCTAGCGGGCAGGCCACAGGCAGAAGTGTGACGTaGGCGGAAGTGCAGCAGCCTCTCTTGCACTGTCCTCGGCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: IPVKPSGQATGRSVT*AEVQQPLLHCPRPK Trigger: CTTGGGCCGAGGACAGTGCAAGAGAGGCTGCTGCACTTCCGCCCACGTCACACTTCTGCCTGTGGCCTGCCCGCTAGGCTTTACTGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | CAAGATCCAAAGCTGCAGAGACACGCCAAGACCACGTGGAATGAATaGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: QDPKLQRHAKTTWNE*SAVSQPHHPAHPCV Trigger: CACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTCATTCCACGTGGTCTTGGCGTGTCTCTGCAGCTTTGGATCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | GGAATGGCCTGTCTGGGGTACAGGTCATGTAGCCCATCAAGAAAGTaGTCCCTGGTGAAACTGCCCATGAGGGAAACGGCTTGGATGCTT | + |
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Preference number: 1 (lower is better) Translates to: GMACLGYRSCSPSRK*SLVKLPMRETAWML Trigger: AAGCATCCAAGCCGTTTCCCTCATGGGCAGTTTCACCAGGGACCACTTTCTTGATGGGCTACATGACCTGTACCCCAGACAGGCCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | TCACTGAAAGGCAGGCGGATACTCTACTTCCAACTGCATGAGTCCTaGAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGACCAC | + |
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Preference number: 1 (lower is better) Translates to: SLKGRRILYFQLHES*SCARSKAAETRQDH Trigger: GTGGTCTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCCGCCTGCCTTTCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | GACAAGGTTAGGAGTCAGGACCAGGTCTGGAGCTGTCCTCAAGGCTaGAAGAATCTTCCATTCGCACTACAGATGTGTGAAGACCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: DKVRSQDQVWSCPQG*KNLPFALQMCEDQV Trigger: GACCTGGTCTTCACACATCTGTAGTGCGAATGGAAGATTCTTGCAGCCTTGAGGACAGCTCCAGACCTGGTCCTGACTCCTAACCTTGTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | TTAAGGCTGGTCCTTCATGCTGTGGTCTACATGGCCCACAGGTCCTaGCTAGCAGCACTTAGAGGGTTAAGAGCACGAGAAGTGGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: LRLVLHAVVYMAHRS*LAALRGLRAREVGK Trigger: TTTACCCACTTCTCGTGCTCTTAACCCTCTAAGTGCTGCTAGCCAGGACCTGTGGGCCATGTAGACCACAGCATGAAGGACCAGCCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR TCA 90 bp | GACGGTCGGAAGGGACAGATTGAACGGAGAGAAGGAAGGCCTTGGTaGCTGACTATAGCACACCCACTGGAAAGAAATGCATTCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: DGRKGQIERREGRPW*LTIAHPLERNAFCV Trigger: GACACAGAATGCATTTCTTTCCAGTGGGTGTGCTATAGTCAGTCACCAAGGCCTTCCTTCTCTCCGTTCAATCTGTCCCTTCCGACCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR TCA 90 bp | CTAAGCATCACTGAAAGGCAGGCGGATACTCTACTTCCAACTGCATaGGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSITERQADTLLPTA*VLQLCKIQSCRDTP Trigger: TGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCCGCCTGCCTTTCAGTGATGCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR TCA 90 bp | AGGGACTATTTGGCTTGGGTTGGATGGGTTGGGTCTCAAAGGTGGTaGAGTCTCAGTGGGACGTACAGAGGATTCTGTAGAACTTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RDYLAWVGWVGSQRW*SLSGTYRGFCRTSV Trigger: CACAGAAGTTCTACAGAATCCTCTGTACGTCCCACTGAGACTTCACCACCTTTGAGACCCAACCCATCCAACCCAAGCCAAATAGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | CAGCCCCACCATCCTGCACACCCATGTGTGGTATTATGTATAGCCTaGATCAAGAATTCAAGGCTCTTTTTCCTCTGGACCTTCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QPHHPAHPCVVLCIA*IKNSRLFFLWTFRA Trigger: TGCCCTGAAGGTCCAGAGGAAAAAGAGCCTTGAATTCTTGATCCAGGCTATACATAATACCACACATGGGTGTGCAGGATGGTGGGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | AGGAAGGCCTTGGTGACTGACTATAGCACACCCACTGGAAAGAAATaGATTCTGTGTCATATAGTACAGGAGATGGAGGGACAACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: RKALVTDYSTPTGKK*ILCHIVQEMEGQQE Trigger: CTCCTGTTGTCCCTCCATCTCCTGTACTATATGACACAGAATGCATTTCTTTCCAGTGGGTGTGCTATAGTCAGTCACCAAGGCCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR TCA 90 bp | GTAAGAGGAACGTTTAATGGTGAAATGGGAAAACTTCTGAGAAGATaGCACAATTGGGGCGATTCTGAAGGAAGGCTGAAGGACCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VRGTFNGEMGKLLRR*HNWGDSEGRLKDRW Trigger: CCAGCGGTCCTTCAGCCTTCCTTCAGAATCGCCCCAATTGTGTCATCTTCTCAGAAGTTTTCCCATTTCACCATTAAACGTTCCTCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | GAGGTGCTTGTGGGAACAGAAGGGAAACTAATGCTGTTTCCAGCATaGATCCCAAGTTCCTATCTTTTCCTGAGAGGGCAGATTGGAATA | + |
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Preference number: 1 (lower is better) Translates to: EVLVGTEGKLMLFPA*IPSSYLFLRGQIGI Trigger: TATTCCAATCTGCCCTCTCAGGAAAAGATAGGAACTTGGGATGCATGCTGGAAACAGCATTAGTTTCCCTTCTGTTCCCACAAGCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | TTTATTTCCTGTAGAATAAATCTAGACTCGTCCCAAAGGGTAGCCTaGGAATGGCCTGTCTGGGGTACAGGTCATGTAGCCCATCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: FISCRINLDSSQRVA*EWPVWGTGHVAHQE Trigger: TTCTTGATGGGCTACATGACCTGTACCCCAGACAGGCCATTCCCAGGCTACCCTTTGGGACGAGTCTAGATTTATTCTACAGGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | CCGAGACAGTCGATGTCTTCACTTACACAGAGACGTCACGTTTTCTaGGCTTTTGTGGTGGCCACAAATGGCTTTAACACATTATGTACA | + |
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Preference number: 1 (lower is better) Translates to: PRQSMSSLTQRRHVF*AFVVATNGFNTLCT Trigger: TGTACATAATGTGTTAAAGCCATTTGTGGCCACCACAAAAGCCCAGAAAACGTGACGTCTCTGTGTAAGTGAAGACATCGACTGTCTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | GTAGGATCAGCCAGGACTCACTACCTCTTAATAAAGAACAAACACTaGACTAATCTGGCTCAAGGATCTTACTGGTCATTTAAAAACTTT | + |
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Preference number: 1 (lower is better) Translates to: VGSARTHYLLIKNKH*TNLAQGSYWSFKNF Trigger: AAAGTTTTTAAATGACCAGTAAGATCCTTGAGCCAGATTAGTGCAGTGTTTGTTCTTTATTAAGAGGTAGTGAGTCCTGGCTGATCCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR GCA 90 bp | GACAAGGAAACTCAGAGCAGAAAACGAGAAGCTAGGAAAACAGCTTaGTTCATTAGAAACGACTCATCCTCTATGTTACATAAACCTTTA | + |
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Preference number: 1 (lower is better) Translates to: DKETQSRKREARKTA*FIRNDSSSMLHKPL Trigger: TAAAGGTTTATGTAACATAGAGGATGAGTCGTTTCTAATGAAGCAAGCTGTTTTCCTAGCTTCTCGTTTTCTGCTCTGAGTTTCCTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CCA 90 bp | TTAATAAAGAACAAACACTGCACTAATCTGGCTCAAGGATCTTACTaGTCATTTAAAAACTTTATTCCCTCTCTTCTGGGAAATGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LIKNKHCTNLAQGSY*SFKNFIPSLLGNGK Trigger: TTTCCCATTTCCCAGAAGAGAGGGAATAAAGTTTTTAAATGACCAGTAAGATCCTTGAGCCAGATTAGTGCAGTGTTTGTTCTTTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 90 bp | GCCACAGGCAGAAGTGTGACGTGGGCGGAAGTGCAGCAGCCTCTCTaGCACTGTCCTCGGCCCAAGGGGTTAAGGCTGGTCCTTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: ATGRSVTWAEVQQPL*HCPRPKGLRLVLHA Trigger: AGCATGAAGGACCAGCCTTAACCCCTTGGGCCGAGGACAGTGCAAGAGAGGCTGCTGCACTTCCGCCCACGTCACACTTCTGCCTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGGTAGCCTGGGAATGGCCTGTCTGGGGTACAGGTCATGTAGCCCATCACCACTTTCTGTCCCATaGGGCCTCCTGGTGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: PKGSLGMACLGYRSCSPSPLSVP*GLLVGT Trigger: TGTTCCCACCAGGAGGCCCCATGGGACAGAAAGTGG...TGATGGGCTACATGACCTGTACCCCAGACAGGCCATTCCCAGGCTACCCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | TCGGCCCAAGGGGTTAAGGCTGGTCCTTCATGCTGTGGTCTACATGGCCCACAGCATGGGGCCTCCTGGTaGGAACAGTGTTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SAQGVKAGPSCCGLHGPQHGASW*EQCSFL Trigger: AAGAAAGGAACACTGTTCCCACCAGGAGGCCCCATG...CTGTGGGCCATGTAGACCACAGCATGAAGGACCAGCCTTAACCCCTTGGGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAAGAGACCTGCGGGGAGTaGAGGAGAGACGGGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTEETCGE*RRDGIG Trigger: TCCTATCCCGTCTCTCCTCCACTCCCCGCAGGTCTC...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GAATGGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTGGTATTAAGGGTAGCCTGGGAATaGCCTGTCTGGGGTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: EWSAVSQPHHPAHPCVVLRVAWE*PVWGTG Trigger: ACCTGTACCCCAGACAGGCCATTCCCAGGCTACCCT...TAATACCACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GAATGGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTGGTATTATCCCAAAGGGTAGCCTaGGAATGGCCTGTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: EWSAVSQPHHPAHPCVVLSQRVA*EWPVWG Trigger: ACCCCAGACAGGCCATTCCCAGGCTACCCTTTGGGA...TAATACCACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAATCAGAAGACAGCATCTaGGTGGGGCGATGGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTESEDSI*VGRWWL Trigger: GAGCCACCATCGCCCCACTCAGATGCTGTCTTCTGA...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 90 bp | GGCATGAGACAAAGGCTGGAGCTCAAAGGGACTATTTGGCTTGGGTaGGATGGGTTGGGTCTCAAAGGTGGTGAAGTCTCAGTGGGACGT | + |
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Preference number: 2 (lower is better) Translates to: GMRQRLELKGTIWLG*DGLGLKGGEVSVGR Trigger: ACGTCCCACTGAGACTTCACCACCTTTGAGACCCAACCCATCCAACCCAAGCCAAATAGTCCCTTTGAGCTCCAGCCTTTGTCTCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTCCACAGGCAGAAGTGTaGCGTGGGCGGAAGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFPQAEV*RGRKCS Trigger: GCTGCACTTCCGCCCACGTCACACTTCTGCCTGTGG...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGACCACGTGCTTCCAGAGAAACTaGAGGCTTTCCCCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: MSPAVVQDPKLQRHAKTTCFQRN*RLSPAP Trigger: TGGAGCTGGGGAAAGCCTGCAGTTTCTCTGGAAGCA...CGTGGTCTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GAATGGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTGGTATTAAGCCCATCAAGAAAGTaGTCCCTGGTGAAACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: EWSAVSQPHHPAHPCVVLSPSRK*SLVKLP Trigger: GGGCAGTTTCACCAGGGACCACTTTCTTGATGGGCT...TAATACCACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTTGCAGCAGCCTCTCTTaGACTGTCCTCGGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFCSSLS*TVLGPR Trigger: CCTTGGGCCGAGGACAGTGCAAGAGAGGCTGCTGCA...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAATGGTCCTTCATGCTGTaGTCTACATGGCCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTEWSFML*STWPTG Trigger: ACCTGTGGGCCATGTAGACCACAGCATGAAGGACCA...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 90 bp | TGTCCCTGTAGGTTGGAACAAGCTAGCAACATAGCAGTAGTAGCATaGGTCTTCAGAAGACAGCATCTGAGTGGGGCGATGGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: CPCRLEQASNIAVVA*VFRRQHLSGAMVAH Trigger: GTGAGCCACCATCGCCCCACTCAGATGCTGTCTTCTGAAGACCAATGCTACTACTGCTATGTTGCTAGCTTGTTCCAACCTACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | CTACAGATGTGTGAAGACCAGGTCTGGCCAAAGGCTTATGGACAGCTAGTGAAGTCAGCCCCACCATCCTaGACACCCATGTGTGGTATT | + |
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Preference number: 2 (lower is better) Translates to: LQMCEDQVWPKAYGQLVKSAPPS*TPMCGI Trigger: AATACCACACATGGGTGTGCAGGATGGTGGGGCTGA...CTTCACTAGCTGTCCATAAGCCTTTGGCCAGACCTGGTCTTCACACATCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAACCCAGTCTCAAAACCTaGATTCCAGTAAAGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTEPSLKT*IPVKPS Trigger: GCTAGGCTTTACTGGAATTCAGGTTTTGAGACTGGG...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGATAGGCCCAGAGACCTaGGGGGAGTGGAGGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPIGPET*GEWRRD Trigger: GTCTCTCCTCCACTCCCCGCAGGTCTCTGGGCCTAT...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAATCTGGGCTTTTGTGGTaGCCACAAATGGCTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTESGLLW*PQMALT Trigger: TGTTAAAGCCATTTGTGGCCACCACAAAAGCCCAGA...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTCTACTTCCAACTGCATaGGTCCTGCAGTTGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFLLPTA*VLQLCK Trigger: CTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAG...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAATTAAGAAGACGGACGTaGAAAAGAACCACCACAACA | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTELRRRT*KRTTTT Trigger: TGTTGTGGTGGTTCTTTTCCACGTCCGTCTTCTTAA...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGTTTTCTGGGCTTTTGTaGTGGCCACAAATGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKFSGLL*WPQMAL Trigger: TAAAGCCATTTGTGGCCACCACAAAAGCCCAGAAAA...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGAGACGTCACGTTTTCTaGGCTTTTGTGGTGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: VGRTEDSVELLCLNIHKRRRHVF*AFVVAT Trigger: TGTGGCCACCACAAAAGCCCAGAAAACGTGACGTCT...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAACTGGCCAAAGGCTTATaGACAGCTAGTGAAGATTTA | + |
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Preference number: 2 (lower is better) Translates to: ANHVPFVNAQGPVAGDTELAKGL*TASEDL Trigger: TAAATCTTCACTAGCTGTCCATAAGCCTTTGGCCAG...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | GAATGGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTGGTATTAATAAAGAACAAACACTaGACTAATCTGGCTCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: EWSAVSQPHHPAHPCVVLIKNKH*TNLAQG Trigger: TCCTTGAGCCAGATTAGTGCAGTGTTTGTTCTTTAT...TAATACCACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGAGAAGGTGGCTGGCATaGTTGGGAGATAGGAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VGRTEDSVELLCLNIHKRRRWLA*LGDRKN Trigger: ATTCTTCCTATCTCCCAACCATGCCAGCCACCTTCT...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGCCCACTGGAAAGAAATaGATTCTGTGTCATATAGTA | + |
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Preference number: 2 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKPTGKK*ILCHIV Trigger: TACTATATGACACAGAATGCATTTCTTTCCAGTGGG...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 90 bp | TTTACTAAAACTTCCAAAGGCAGGAGAGAGTACAGTATGGTTATTTaGACGGTCGGAAGGGACAGATTGAACGGAGAGAAGGAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FTKTSKGRREYSMVI*TVGRDRLNGEKEGL Trigger: AAGGCCTTCCTTCTCTCCGTTCAATCTGTCCCTTCCGACCGTCAAAATAACCATACTGTACTCTCTCCTGCCTTTGGAAGTTTTAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR-3UTR GCA 90 bp | CTACAGATGTGTGAAGACCAGGTCTGGCCAAAGGCTTATGGACAGCTAGTGAAGGCATCTAGAAATGACTaGGGCTACAAAGAATACATT | + |
|
Preference number: 2 (lower is better) Translates to: LQMCEDQVWPKAYGQLVKASRND*GYKEYI Trigger: AATGTATTCTTTGTAGCCGCAGTCATTTCTAGATGC...CTTCACTAGCTGTCCATAAGCCTTTGGCCAGACCTGGTCTTCACACATCTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CCA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGGTTCCAGGACAGCTATaGGACACAGAGAAATCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPVPGQL*DTEKSC Trigger: ACAGGATTTCTCTGTGTCCCATAGCTGTCCTGGAAC...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR GCA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGCAACTGCATGAGTCCTaGAGTTGTGCAAGATCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRQLHES*SCARSK Trigger: TTTGGATCTTGCACAACTGCAGGACTCATGCAGTTG...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CCA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGTTATTCCCTCTCTTCTaGGAAATGGGAAAGCATATC | + |
|
Preference number: 2 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPLFPLF*EMGKHI Trigger: GATATGCTTTCCCATTTCCCAGAAGAGAGGGAATAA...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGGATGGAGGGGTCAGTTaGGAAGTCTACAAATATTTA | + |
|
Preference number: 2 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRDGGVS*EVYKYL Trigger: TAAATATTTGTAGACTTCCCAACTGACCCCTCCATC...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGAAAAATCAGAACAGGTaGCCAGATTTTACTCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRKNQNR*PDFTLR Trigger: TCTTAGAGTAAAATCTGGCCACCTGTTCTGATTTTT...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | AAGCCTAGCGGGCAGGCCACAGGCAGAAGTGTGACGTaGGCGGAAGTGCAGCAGCCTCTCTTGCACTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KPSGQATGRSVT*AEVQQPLLHCP Trigger: AGGACAGTGCAAGAGAGGCTGCTGCACTTCCGCCCACGTCACACTTCTGCCTGTGGCCTGCCCGCTAGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TGTCTTTCAGAGGTCCTTGTGGGGCTTTCCGGCTCCTaGAAGTCAGGATCGCTTTCAGCCACGGTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLSEVLVGLSGS*KSGSLSATVGH Trigger: GTGGCCCACCGTGGCTGAAAGCGATCCTGACTTCCAGGAGCCGGAAAGCCCCACAAGGACCTCTGAAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | GCCACGGTGGGCCACTTTCTGTCCCATGGGGCCTCCTaGTGGGAACAGTGTTCCTTTCTTCCAGAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: ATVGHFLSHGAS*WEQCSFLPEDE Trigger: CTCATCTTCTGGAAGAAAGGAACACTGTTCCCACCAGGAGGCCCCATGGGACAGAAAGTGGCCCACCGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TGGTCCCTGGTGAAACTGCCCATGAGGGAAACGGCTTaGATGCTTCCAGAGAAACTGCAGGCTTTCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSLVKLPMRETA*MLPEKLQAFPS Trigger: GCTGGGGAAAGCCTGCAGTTTCTCTGGAAGCATCCAAGCCGTTTCCCTCATGGGCAGTTTCACCAGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | GGCAGGCGGATACTCTACTTCCAACTGCATGAGTCCTaGAGTTGTGCAAGATCCAAAGCTGCAGAGACACGC | + |
|
Preference number: 3 (lower is better) Translates to: GRRILYFQLHES*SCARSKAAETR Trigger: GCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCCGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TGTCTGGGGTACAGGTCATGTAGCCCATCAAGAAAGTaGTCCCTGGTGAAACTGCCCATGAGGGAAACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLGYRSCSPSRK*SLVKLPMRETA Trigger: AGCCGTTTCCCTCATGGGCAGTTTCACCAGGGACCACTTTCTTGATGGGCTACATGACCTGTACCCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | AGGAGGAAGGACAAGGTTAGGAGTCAGGACCAGGTCTaGAGCTGTCCTCAAGGCTGCAAGAATCTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: RRKDKVRSQDQV*SCPQGCKNLPF Trigger: GAATGGAAGATTCTTGCAGCCTTGAGGACAGCTCCAGACCTGGTCCTGACTCCTAACCTTGTCCTTCCTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | GGCATGAGACAAAGGCTGGAGCTCAAAGGGACTATTTaGCTTGGGTTGGATGGGTTGGGTCTCAAAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GMRQRLELKGTI*LGLDGLGLKGG Trigger: ACCACCTTTGAGACCCAACCCATCCAACCCAAGCCAAATAGTCCCTTTGAGCTCCAGCCTTTGTCTCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | GGATACTCTACTTCCAACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGGTCGGAAGGGACAGATaGAACGGAGAGAAGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GYSTSNCMSPAVVQDPKLVGRDR*NGEKEG Trigger: GCCTTCCTTCTCTCCGTTCAATCTGTCCCTTCCGAC...CAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | TTGGCTTGGGTTGGATGGGTTGGGTCTCAAAGGTGGTaGAGTCTCAGTGGGACGTACAGAGGATTCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAWVGWVGSQRW*SLSGTYRGFCR Trigger: TCTACAGAATCCTCTGTACGTCCCACTGAGACTTCACCACCTTTGAGACCCAACCCATCCAACCCAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | AGGAGTCAGGACCAGGTCTGGAGCTGTCCTCAAGGCTaGAAGAATCTTCCATTCGCACTACAGATGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSQDQVWSCPQG*KNLPFALQMCE Trigger: TTCACACATCTGTAGTGCGAATGGAAGATTCTTGCAGCCTTGAGGACAGCTCCAGACCTGGTCCTGACTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | ATAAATCTAGACTCGTCCCAAAGGGTAGCCTGGGAATaGCCTGTCTGGGGTACAGGTCATGTAGCCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: INLDSSQRVAWE*PVWGTGHVAHQ Trigger: TTGATGGGCTACATGACCTGTACCCCAGACAGGCCATTCCCAGGCTACCCTTTGGGACGAGTCTAGATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TGTAGAATAAATCTAGACTCGTCCCAAAGGGTAGCCTaGGAATGGCCTGTCTGGGGTACAGGTCATGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CRINLDSSQRVA*EWPVWGTGHVA Trigger: GGCTACATGACCTGTACCCCAGACAGGCCATTCCCAGGCTACCCTTTGGGACGAGTCTAGATTTATTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | AAAGGCTGGAGCTCAAAGGGACTATTTGGCTTGGGTTaGATGGGTTGGGTCTCAAAGGTGGTGAAGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGWSSKGLFGLG*MGWVSKVVKSQ Trigger: CTGAGACTTCACCACCTTTGAGACCCAACCCATCCAACCCAAGCCAAATAGTCCCTTTGAGCTCCAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGGTGCAGCAGCCTCTCTaGCACTGTCCTCGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPVQQPL*HCPRPK Trigger: CTTGGGCCGAGGACAGTGCAAGAGAGGCTGCTGCAC...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | ACTGAAAGGCAGGCGGATACTCTACTTCCAACTGCATaGGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TERQADTLLPTA*VLQLCKIQSCR Trigger: TCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCCGCCTGCCTTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | GAAGATGACACAATTGGGGCGATTCTGAAGGAAGGCTaGAGGACCGCTGGTTTAGGCTTCAGATATTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: EDDTIGAILKEG*RTAGLGFRYFP Trigger: AGGGAAATATCTGAAGCCTAAACCAGCGGTCCTTCAGCCTTCCTTCAGAATCGCCCCAATTGTGTCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | GTGGGAACAGAAGGGAAACTAATGCTGTTTCCAGCATaGATCCCAAGTTCCTATCTTTTCCTGAGAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGTEGKLMLFPA*IPSSYLFLRGQ Trigger: CTGCCCTCTCAGGAAAAGATAGGAACTTGGGATGCATGCTGGAAACAGCATTAGTTTCCCTTCTGTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGAGGCAGAGTTTGAATTaGAACCACGGATTGCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: VGRTEDSVELLCLNIHKRRQSLN*NHGLPT Trigger: GGTTGGCAATCCGTGGTTCAAATTCAAACTCTGCCT...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | TCAGTGGGACGTACAGAGGATTCTGTAGAACTTCTGTaGCTGAATATCCACAAAAGGAGAATAGGCTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: SVGRTEDSVELL*LNIHKRRIGST Trigger: GGTAGAGCCTATTCTCCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TCGATGTCTTCACTTACACAGAGACGTCACGTTTTCTaGGCTTTTGTGGTGGCCACAAATGGCTTTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: SMSSLTQRRHVF*AFVVATNGFNT Trigger: TGTGTTAAAGCCATTTGTGGCCACCACAAAAGCCCAGAAAACGTGACGTCTCTGTGTAAGTGAAGACATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | CATCCTGCACACCCATGTGTGGTATTATGTATAGCCTaGATCAAGAATTCAAGGCTCTTTTTCCTCTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HPAHPCVVLCIA*IKNSRLFFLWT Trigger: GGTCCAGAGGAAAAAGAGCCTTGAATTCTTGATCCAGGCTATACATAATACCACACATGGGTGTGCAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGGAGAGAAGGAAGGCCTaGGTGACTGACTATAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPERRKA*VTDYST Trigger: TGTGCTATAGTCAGTCACCAAGGCCTTCCTTCTCTC...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | TTGGTGACTGACTATAGCACACCCACTGGAAAGAAATaGATTCTGTGTCATATAGTACAGGAGATGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVTDYSTPTGKK*ILCHIVQEMEG Trigger: TCCCTCCATCTCCTGTACTATATGACACAGAATGCATTTCTTTCCAGTGGGTGTGCTATAGTCAGTCACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGTTTTTGAGGCAGAGTTaGAATTTGAACCACGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: VGRTEDSVELLCLNIHKRFLRQS*NLNHGL Trigger: CAATCCGTGGTTCAAATTCAAACTCTGCCTCAAAAA...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | TGTTTCCAGCATGCATCCCAAGTTCCTATCTTTTCCTaGGAGGGCAGATTGGAATATCTTATGAGATGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CFQHASQVPIFS*EGRLEYLMRWL Trigger: CAACCATCTCATAAGATATTCCAATCTGCCCTCTCAGGAAAAGATAGGAACTTGGGATGCATGCTGGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR-3UTR CAA 90 bp | CTATTATTTTCTGATGGTTCAGCAGTGAGCTCGCTTACAGTAAGAAAGAAACCGGGATGGAGGGGTCAGTaGGGAAGTCTACAAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: LLFSDGSAVSSLTVRKKPGWRGQ*GSLQIF Trigger: AAATATTTGTAGACTTCCCAACTGACCCCTCCATCC...CGGTTTCTTTCTTACTGTAAGCGAGCTCACTGCTGAACCATCAGAAAATAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | GAAATGACAAATATCTTCAGAGTCAAGTTTCCTCCTTaGCTAAGCATCACTGAAAGGCAGGCGGATACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EMTNIFRVKFPP*LSITERQADTL Trigger: TAGAGTATCCGCCTGCCTTTCAGTGATGCTTAGTCAAGGAGGAAACTTGACTCTGAAGATATTTGTCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | GCCAGGACTCACTACCTCTTAATAAAGAACAAACACTaGACTAATCTGGCTCAAGGATCTTACTGGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ARTHYLLIKNKH*TNLAQGSYWSF Trigger: AAATGACCAGTAAGATCCTTGAGCCAGATTAGTGCAGTGTTTGTTCTTTATTAAGAGGTAGTGAGTCCTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | ACTCAGAGCAGAAAACGAGAAGCTAGGAAAACAGCTTaGTTCATTAGAAACGACTCATCCTCTATGTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TQSRKREARKTA*FIRNDSSSMLH Trigger: ATGTAACATAGAGGATGAGTCGTTTCTAATGAAGCAAGCTGTTTTCCTAGCTTCTCGTTTTCTGCTCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | TGTGCTTTCATCAGTGACAATGGACTGGGTAAATGGTaGGCTGGAATAAATCAAATTTCAACGAATCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CAFISDNGLGKW*AGINQISTNPK Trigger: TTTGGGATTCGTTGAAATTTGATTTATTCCAGCCCACCATTTACCCAGTCCATTGTCACTGATGAAAGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGGATAATACATaGATGGAAATGAAGACCATGATAAGTAAGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: EREREREREDNT*MEMKTMISKCN Trigger: ATTGCACTTACTTATCATGGTCTTCATTTCCATTCATGTATTATCCTCTCTCTCTCTCTCTCTCTCTCTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR GCA 72 bp | AAAGCCAGAATGACGCTATTCTCCAAATCATACCTTTaGCAGTTTTTGAAGATATGCTGTGCTTCTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KARMTLFSKSYL*QFLKICCASFP Trigger: AGGAAAAGAAGCACAGCATATCTTCAAAAACTGGCAAAGGTATGATTTGGAGAATAGCGTCATTCTGGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CCA 72 bp | AACAAACACTGCACTAATCTGGCTCAAGGATCTTACTaGTCATTTAAAAACTTTATTCCCTCTCTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NKHCTNLAQGSY*SFKNFIPSLLG Trigger: TCCCAGAAGAGAGGGAATAAAGTTTTTAAATGACCAGTAAGATCCTTGAGCCAGATTAGTGCAGTGTTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR TCA 72 bp | AAATCAGAACAGGTGGCCAGATTTTACTCTAAGAGCTaGTTAGTGCAATTAGCAATAGAAGCCAAAGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KSEQVARFYSKS*LVQLAIEAKED Trigger: ATCTTCTTTGGCTTCTATTGCTAATTGCACTAATCAGCTCTTAGAGTAAAATCTGGCCACCTGTTCTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CAA 72 bp | AGAAGTGTGACGTGGGCGGAAGTGCAGCAGCCTCTCTaGCACTGTCCTCGGCCCAAGGGGTTAAGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVTWAEVQQPL*HCPRPKGLRLV Trigger: GACCAGCCTTAACCCCTTGGGCCGAGGACAGTGCAAGAGAGGCTGCTGCACTTCCGCCCACGTCACACTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR CCA 90 bp | GAATGGTCTGCCGTTTCTCAGCCCCACCATCCTGCACACCCATGTGTGGTATTATCTGGTCCTCCCCGTTaGGTAACTGCACGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EWSAVSQPHHPAHPCVVLSGPPR*VTARLP Trigger: GGGCAGCCGTGCAGTTACCCAACGGGGAGGACCAGA...TAATACCACACATGGGTGTGCAGGATGGTGGGGCTGAGAAACGGCAGACCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR TCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAAGAGTTGAGGGACGCCTaGGCCCGTTTGTGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANHVPFVNAQGPVAGDTEELRDA*ARLCSS Trigger: TGAGCTGCACAAACGGGCTCAGGCGTCCCTCAACTC...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR TCA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTGGTCCACACCCGAGTTaGGGGACGCCTGAGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFGPHPS*GTPEPV Trigger: AACGGGCTCAGGCGTCCCTCAACTCGGGTGTGGACC...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CAA 72 bp | CACGAGAAGTGGGTAAAAGATGTCTTTCAGAGGTCCTaGTGGGGCTTTCCGGCTCCTGGAAGTCAGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: HEKWVKDVFQRS*WGFPAPGSQDR Trigger: GCGATCCTGACTTCCAGGAGCCGGAAAGCCCCACAAGGACCTCTGAAAGACATCTTTTACCCACTTCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR GCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAAGTTGACGTGAGCCTCTaGGCCCATCACAATGACACG | + |
|
Preference number: 4 (lower is better) Translates to: ANHVPFVNAQGPVAGDTEVDVSL*AHHNDT Trigger: CGTGTCATTGTGATGGGCGCAGAGGCTCACGTCAAC...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| 3UTR CAA 72 bp | TGGCATGAGACAAAGGCTGGAGCTCAAAGGGACTATTaGGCTTGGGTTGGATGGGTTGGGTCTCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WHETKAGAQRDY*AWVGWVGSQRW Trigger: CCACCTTTGAGACCCAACCCATCCAACCCAAGCCAAATAGTCCCTTTGAGCTCCAGCCTTTGTCTCATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR CCA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTGCCACCCAGTCGTTCTaGTCCTCCCCGTTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFATQSF*SSPLGN Trigger: GTTACCCAACGGGGAGGACCAGAACGACTGGGTGGC...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
||
| CDS-3UTR GCA 90 bp | GGATACTCTACTTCCAACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGGACAGGTCCGCTCAGTaGAGAACTCACAGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYSTSNCMSPAVVQDPKLDRSAQ*RTHRWC Trigger: GCACCATCTGTGAGTTCTGCACTGAGCGGACCTGTC...CAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR GCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAACTGGGGAGCGGGCAGTaGAGTTGGTTTCTTATACTT | + |
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Preference number: 4 (lower is better) Translates to: ANHVPFVNAQGPVAGDTELGSGQ*SWFLIL Trigger: AAGTATAAGAAACCAACTGCACTGCCCGCTCCCCAG...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CCA 90 bp | GGATACTCTACTTCCAACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGATCGGTACTCGTATTTaGGGCCCCCTGACATCACAG | + |
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Preference number: 4 (lower is better) Translates to: GYSTSNCMSPAVVQDPKLIGTRI*GPLTSQ Trigger: CTGTGATGTCAGGGGGCCCCAAATACGAGTACCGAT...CAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CCA 90 bp | GCCAACCATGTGCCCTTTGTTAATGCTCAGGGTCCTGTAGCTGGTGACACTGAAAGCGGGCAGTGCAGTTaGTTTCTTATACTTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ANHVPFVNAQGPVAGDTESGQCS*FLILEV Trigger: GACCTCAAGTATAAGAAACCAACTGCACTGCCCGCT...TTCAGTGTCACCAGCTACAGGACCCTGAGCATTAACAAAGGGCACATGGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR TCA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGGTATTTGGGGCCCCCTaGCATCACAGGACAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRVFGAP*HHRTGP Trigger: CGGACCTGTCCTGTGATGTCAGGGGGCCCCAAATAC...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 72 bp | AGGTTGGAACAAGCTAGCAACATAGCAGTAGTAGCATaGGTCTTCAGAAGACAGCATCTGAGTGGGGCGATG | + |
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Preference number: 4 (lower is better) Translates to: RLEQASNIAVVA*VFRRQHLSGAM Trigger: CATCGCCCCACTCAGATGCTGTCTTCTGAAGACCAATGCTACTACTGCTATGTTGCTAGCTTGTTCCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR TCA 90 bp | GGATACTCTACTTCCAACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGTTGGTTTCTTATACTTaGGGTCATCCTGCCATCGGT | + |
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Preference number: 4 (lower is better) Translates to: GYSTSNCMSPAVVQDPKLLVSYT*GHPAIG Trigger: ACCGATGGCAGGATGACCTCAAGTATAAGAAACCAA...CAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR GCA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGGGCACAGGATCTTCTTaGAGATCTGGAGGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VGRTEDSVELLCLNIHKRGTGSS*RSGGSS Trigger: AGAACTTCCTCCAGATCTGCAAGAAGATCCTGTGCC...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR TCA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGCTGCGCCCATCACAATaGCACGGTCAAAGTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRLRPSQ*HGQSDE Trigger: TTCATCACTTTGACCGTGTCATTGTGATGGGCGCAG...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CCA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGTCCTCATTGTTTATCTaGACTTCAATCCAATCCATA | + |
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Preference number: 4 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKSSLFI*TSIQSI Trigger: TATGGATTGGATTGAAGTCCAGATAAACAATGAGGA...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CCA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGATCTTCTTGCAGATCTaGAGGAAGTTCTTTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VGRTEDSVELLCLNIHKRIFLQI*RKFFGK Trigger: CTTCCCAAAGAACTTCCTCCAGATCTGCAAGAAGAT...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| 3UTR CAA 72 bp | AGAAAATCAACTACAAAGAACTTTTTGAGGCAGAGTTaGAATTTGAACCACGGATTGCCAACCATGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RKSTTKNFLRQS*NLNHGLPTMCP Trigger: AGGGCACATGGTTGGCAATCCGTGGTTCAAATTCAAACTCTGCCTCAAAAAGTTCTTTGTAGTTGATTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGTTCTGGTCCTCCCCGTaGGGTAACTGCACGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKFWSSP*GNCTAA Trigger: GGCAGCCGTGCAGTTACCCAACGGGGAGGACCAGAA...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | TCGGCCCAAGGGGTTAAGGCTGGTCCTTCATGCTGTGGTCTACATGGCCCACAGCGGCACAGGATCTTCTaGCAGATCTGGAGGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SAQGVKAGPSCCGLHGPQRHRIF*QIWRKF Trigger: GAACTTCCTCCAGATCTGCAAGAAGATCCTGTGCCG...CTGTGGGCCATGTAGACCACAGCATGAAGGACCAGCCTTAACCCCTTGGGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGAAGGGCTCCAGCTCCTaGCGGTCTATGAGGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKKGSSS*RSMRFI Trigger: GATGAACCTCATAGACCGCAAGGAGCTGGAGCCCTT...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CCA 90 bp | TGGACGAAGACCCGAAAGAGGCGGCACAGGATCTTCTTGCAGATCTaGAGGAAGTTCTTTGGGAAGGGGACGCCAACACATGTTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: WTKTRKRRHRIFLQI*RKFFGKGTPTHVGN Trigger: ATTTCCAACATGTGTTGGCGTCCCCTTCCCAAAGAACTTCCTCCAGATCTGCAAGAAGATCCTGTGCCGCCTCTTTCGGGTCTTCGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | AACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGGGTTCAAACTTCCTCTaGGGCCTGAAGGTCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: NCMSPAVVQDPKLQRHAKGSNFL*GLKVLS Trigger: GGACAAGACCTTCAGGCCCAAGAGGAAGTTTGAACC...CTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | CTACAGATGTGTGAAGACCAGGTCTGGCCAAAGGCTTATGGACAGCTAGTGAAGTCTGGAGGAAGTTCTTaGGGAAGGGGACGCCAACAC | + |
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Preference number: 5 (lower is better) Translates to: LQMCEDQVWPKAYGQLVKSGGSS*GRGRQH Trigger: GTGTTGGCGTCCCCTTCCCAAAGAACTTCCTCCAGA...CTTCACTAGCTGTCCATAAGCCTTTGGCCAGACCTGGTCTTCACACATCTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | AAGACGGATAGGGTGGTGTTCTGGTTACTAGCAGGAGGGTATGAGAAAGCATTTCATCGGTACTCGTATTaGGGGCCCCCTGACATCACA | + |
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Preference number: 5 (lower is better) Translates to: KTDRVVFWLLAGGYEKAFHRYSY*GPPDIT Trigger: TGTGATGTCAGGGGGCCCCAAATACGAGTACCGATG...AAATGCTTTCTCATACCCTCCTGCTAGTAACCAGAACACCACCCTATCCGTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | ATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGCAGAGACACGCCAAGACCACGGGACGCCAACACATGTaGGAAATATGTCCTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: MSPAVVQDPKLQRHAKTTGRQHM*EICPHC Trigger: ACAATGAGGACATATTTCCAACATGTGTTGGCGTCC...CGTGGTCTTGGCGTGTCTCTGCAGCTTTGGATCTTGCACAACTGCAGGACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | GGATACTCTACTTCCAACTGCATGAGTCCTGCAGTTGTGCAAGATCCAAAGCTGGTTGGTTTCTTATACTaGAGGTCATCCTGCCATCGG | + |
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Preference number: 5 (lower is better) Translates to: GYSTSNCMSPAVVQDPKLVGFLY*RSSCHR Trigger: CCGATGGCAGGATGACCTCAAGTATAAGAAACCAAC...CAGCTTTGGATCTTGCACAACTGCAGGACTCATGCAGTTGGAAGTAGAGTATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CCA 90 bp | AAGGGGACGCCAACACATGTTGGAAATATGTCCTCATTGTTTATCTaGACTTCAATCCAATCCATAAGCAGATTCATGTACTGGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: KGTPTHVGNMSSLFI*TSIQSISRFMYWGA Trigger: CGCTCCCCAGTACATGAATCTGCTTATGGATTGGATTGAAGTCCAGATAAACAATGAGGACATATTTCCAACATGTGTTGGCGTCCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | TTAATCTTTCCTTTTCATTATTTCCACTGGTGGAACCCAAAGCCAGAGGTAAGGAGTGACACATCCTGGTaGTCATCTCTTTCAAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LIFPFHYFHWWNPKPEVRSDTSW*SSLSRA Trigger: AGCCCTTGAAAGAGATGACAACCAGGATGTGTCACT...CCTTACCTCTGGCTTTGGGTTCCACCAGTGGAAATAATGAAAAGGAAAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS-3UTR CAA 90 bp | GTGGGACGTACAGAGGATTCTGTAGAACTTCTGTGCCTGAATATCCACAAAAGGGGAAATATGTCCTCATaGTTTATCTGGACTTCAATC | + |
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Preference number: 5 (lower is better) Translates to: VGRTEDSVELLCLNIHKRGNMSS*FIWTSI Trigger: GATTGAAGTCCAGATAAACAATGAGGACATATTTCC...CCTTTTGTGGATATTCAGGCACAGAAGTTCTACAGAATCCTCTGTACGTCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CCA 72 bp | ACCCGAAAGAGGCGGCACAGGATCTTCTTGCAGATCTaGAGGAAGTTCTTTGGGAAGGGGACGCCAACACAT | + |
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Preference number: 6 (lower is better) Translates to: TRKRRHRIFLQI*RKFFGKGTPTH Trigger: ATGTGTTGGCGTCCCCTTCCCAAAGAACTTCCTCCAGATCTGCAAGAAGATCCTGTGCCGCCTCTTTCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CCA 72 bp | GAGGAAGTTCTTTGGGAAGGGGACGCCAACACATGTTaGAAATATGTCCTCATTGTTTATCTGGACTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: EEVLWEGDANTC*KYVLIVYLDFN Trigger: ATTGAAGTCCAGATAAACAATGAGGACATATTTCCAACATGTGTTGGCGTCCCCTTCCCAAAGAACTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CAA 72 bp | AAGGGGACGCCAACACATGTTGGAAATATGTCCTCATaGTTTATCTGGACTTCAATCCAATCCATAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KGTPTHVGNMSS*FIWTSIQSISR Trigger: TCTGCTTATGGATTGGATTGAAGTCCAGATAAACAATGAGGACATATTTCCAACATGTGTTGGCGTCCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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| CDS CAA 90 bp | TTCTTTGGGAAGGGGACGCCAACACATGTTGGAAATATGTCCTCATaGTTTATCTGGACTTCAATCCAATCCATAAGCAGATTCATGTAC | + |
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Preference number: 6 (lower is better) Translates to: FFGKGTPTHVGNMSS*FIWTSIQSISRFMY Trigger: GTACATGAATCTGCTTATGGATTGGATTGAAGTCCAGATAAACAATGAGGACATATTTCCAACATGTGTTGGCGTCCCCTTCCCAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102975.10 |
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