Pregenerated sensors for MOB1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006262Ensembl transcript IDs: ENSMUST00000006424.8, ENSMUST00000113229.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAAAGCCCTCTCCTCAGGGCTCTGGGAACCTTATGGAAAACGATaGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACACCAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: TKALSSGLWEPYGKR*GKSRSQRQWRTPRT Trigger: TGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | GGCATAAAGTGCAGAGAGGGAGACCTTGGCATACTCTGCTTTAAATaGGATGTCTCCACCAAAGCCCTCTCCTCAGGGCTCTGGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: GIKCREGDLGILCFK*DVSTKALSSGLWEP Trigger: AGGTTCCCAGAGCCCTGAGGAGAGGGCTTTGGTGGAGACATCCCATTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCACTTTATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR GCA 90 bp | ACCCACAAAGGCATAAAGTGCAGAGAGGGAGACCTTGGCATACTCTaGTTTAAATGGGATGTCTCCACCAAAGCCCTCTCCTCAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: THKGIKCREGDLGIL*FKWDVSTKALSSGL Trigger: GAGCCCTGAGGAGAGGGCTTTGGTGGAGACATCCCATTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCACTTTATGCCTTTGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR GCA 90 bp | GTCTCCGTGCATGTCTTAAGCAGTTGCACAGTGAGAATGCTGCCCTaGTGCTCCCATTACCTGGCACCTGCAGCATTTCTGATTTCTATC | + |
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Preference number: 1 (lower is better) Translates to: VSVHVLSSCTVRMLP*CSHYLAPAAFLISI Trigger: GATAGAAATCAGAAATGCTGCAGGTGCCAGGTAATGGGAGCAGCAGGGCAGCATTCTCACTGTGCAACTGCTTAAGACATGCACGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | CTGTCTTCAGACACACCAGAAGAGGGCGTCAGATCTCATTACAGATaGTTGTGGCCACCATGTGGCTACTGGGATTTGAACTCAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: LSSDTPEEGVRSHYR*LWPPCGYWDLNSGP Trigger: AGGTCCTGAGTTCAAATCCCAGTAGCCACATGGTGGCCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | TGCTTTAAATGGGATGTCTCCACCAAAGCCCTCTCCTCAGGGCTCTaGGAACCTTATGGAAAACGATGGGGAAAGTCTAGGAGTCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: CFKWDVSTKALSSGL*EPYGKRWGKSRSQR Trigger: CCTCTGACTCCTAGACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTGGTGGAGACATCCCATTTAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | TCAGACACACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTaGCCACCATGTGGCTACTGGGATTTGAACTCAGGACCTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGVRSHYRWL*PPCGYWDLNSGPSE Trigger: TTCAGAAGGTCCTGAGTTCAAATCCCAGTAGCCACATGGTGGCCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR TCA 90 bp | AATCCCAGCATTTGGGGTAGAGGGGCAAGCAGATCTCTTACAGTTTaGGACCTGCTCTATAAGCCAGGGCTACATAGTAAGACCCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: NPSIWGRGASRSLTV*DLLYKPGLHSKTQS Trigger: AGACTGGGTCTTACTATGTAGCCCTGGCTTATAGAGCAGGTCTCAAACTGTAAGAGATCTGCTTGCCCCTCTACCCCAAATGCTGGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR TCA 90 bp | CTAATAGCATGGCTTCTATGGCACATGGAAGAAAAGGTCAGCAAATaGACAAGGCCAGCTGTACGACCTACTGCTAATGGCAAACACTCC | + |
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Preference number: 1 (lower is better) Translates to: LIAWLLWHMEEKVSK*TRPAVRPTANGKHS Trigger: GGAGTGTTTGCCATTAGCAGTAGGTCGTACAGCTGGCCTTGTTCATTTGCTGACCTTTTCTTCCATGTGCCATAGAAGCCATGCTATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR GCA 90 bp | CAGAGATGCTTCTTTCTGCAGAACCAAACCCACAAAGGCATAAAGTaGAGAGAGGGAGACCTTGGCATACTCTGCTTTAAATGGGATGTC | + |
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Preference number: 1 (lower is better) Translates to: QRCFFLQNQTHKGIK*REGDLGILCFKWDV Trigger: GACATCCCATTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCACTTTATGCCTTTGTGGGTTTGGTTCTGCAGAAAGAAGCATCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | TTACTATTTGCAGATGTTGCTTGTATGCTGATGATAGTAAGACTCTaGATATGGGTAGGGCGGAAAGACAGGATCTGGAAGGAGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LLFADVACMLMIVRL*IWVGRKDRIWKELG Trigger: CCCCAACTCCTTCCAGATCCTGTCTTTCCGCCCTACCCATATCCAGAGTCTTACTATCATCAGCATACAAGCAACATCTGCAAATAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | ATGAGTGGGAAAACACAAATCTTAAAGGCCAGTGATTTCGCTTCCTaGTTGTCTGAGATTTTATCGCAAAGCTTTCTACTATGCAGCACG | + |
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Preference number: 1 (lower is better) Translates to: MSGKTQILKASDFAS*LSEILSQSFLLCST Trigger: CGTGCTGCATAGTAGAAAGCTTTGCGATAAAATCTCAGACAACCAGGAAGCGAAATCACTGGCCTTTAAGATTTGTGTTTTCCCACTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CCA 90 bp | ATGATAGTAAGACTCTGGATATGGGTAGGGCGGAAAGACAGGATCTaGAAGGAGTTGGGGAAGGGAATCCATAATCAGAATATATTATAT | + |
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Preference number: 1 (lower is better) Translates to: MIVRLWIWVGRKDRI*KELGKGIHNQNILY Trigger: ATATAATATATTCTGATTATGGATTCCCTTCCCCAACTCCTTCCAGATCCTGTCTTTCCGCCCTACCCATATCCAGAGTCTTACTATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR TCA 90 bp | GGTGTTGTATACAACTTCACAGCAAGCATTTCTAGTTTACAAGTTTaGAAGTATGTGTCTCTAACTAGAAAGAGAGAGAAAATTGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GVVYNFTASISSLQV*KYVSLTRKREKIEG Trigger: TCCCTCAATTTTCTCTCTCTTTCTAGTTAGAGACACATACTTTCAAACTTGTAAACTAGAAATGCTTGCTGTGAAGTTGTATACAACACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR CAA 90 bp | TCCCCCGTGACTGCGGACTCTTGTCTCCGTGCATGTCTTAAGCAGTaGCACAGTGAGAATGCTGCCCTGCTGCTCCCATTACCTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SPVTADSCLRACLKQ*HSENAALLLPLPGT Trigger: GGTGCCAGGTAATGGGAGCAGCAGGGCAGCATTCTCACTGTGCAACTGCTTAAGACATGCACGGAGACAAGAGTCCGCAGTCACGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | CGATGGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACACCAAGGACACAAGGCAGAATGCTGCCCTGCTaGTCCCATTACCTGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: RWGKSRSQRQWRTPRTQGRMLPC*SHYLAP Trigger: AGGTGCCAGGTAATGGGAGCAGCAGGGCAGCATTCT...GCCTTGTGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCCGGAAAGACAGGATCTaGAAGGAGTTGGGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KPVGVLELKKWTHGSDPSRKDRI*KELGKG Trigger: TCCCTTCCCCAACTCCTTCCAGATCCTGTCTTTCCG...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCCTCTCCTCAGGGCTCTGGGAACCTTATGGAAAACGATGGGGAAAGTCACCTCCACAGGCTCCTaGATGCACACAGTGCATATA | + |
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Preference number: 2 (lower is better) Translates to: QSPLLRALGTLWKTMGKVTSTGS*MHTVHI Trigger: TATATGCACTGTGTGCATGCAGGAGCCTGTGGAGGT...GACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCATTAATCCCAGCATTTaGGGTAGAGGGGCAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KPVGVLELKKWTHGSDPSINPSI*GRGASR Trigger: TCTGCTTGCCCCTCTACCCCAAATGCTGGGATTAAT...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCCACCTGCAGCATTTCTaGTTTCTATCTTCAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: KPVGVLELKKWTHGSDPSHLQHF*FLSSEM Trigger: CATTTCTGAAGATAGAAATCAGAAATGCTGCAGGTG...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | CGATGGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACACCAAGGACACAAGGCTGTCTGTGTTTCTTGTaGCTTTTCTTTGGTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RWGKSRSQRQWRTPRTQGCLCFL*LFFGFL Trigger: GAGAAAACCAAAGAAAAGGCACAAGAAACACAGACA...GCCTTGTGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCTTTCAATTAAGACACTaGAGTGATGGCTCAGGGATT | + |
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Preference number: 2 (lower is better) Translates to: KPVGVLELKKWTHGSDPSFQLRH*SDGSGI Trigger: AATCCCTGAGCCATCACTCCAGTGTCTTAATTGAAA...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCAGTTCTAGAGATCCCTaGCTCCAGAACTTAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: KPVGVLELKKWTHGSDPSSSRDP*LQNLMF Trigger: AAACATTAAGTTCTGGAGCCAGGGATCTCTAGAACT...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | CGATGGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACACCAAGGACACAAGGCAGCATTACTAATAAATaGCAGGATTGCCTACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RWGKSRSQRQWRTPRTQGSITNK*QDCLPF Trigger: AAAAGGTAGGCAATCCTGGCATTTATTAGTAATGCT...GCCTTGTGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCCCTCTCCTCAGGGCTCTGGGAACCTTATGGAAAACGATGGGGAAAGTCCTAACATACTCTCACTaGGAATACAAACCACTCTTA | + |
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Preference number: 2 (lower is better) Translates to: QSPLLRALGTLWKTMGKVLTYSH*EYKPLL Trigger: TAAGAGTGGTTTGTATTCCCAGTGAGAGTATGTTAG...GACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CAA 90 bp | CCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATTaGGCAATTGCTAGGAAACCTCACAGTTCAACATCCTTTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PFLFEVQRDSALTAH*AIARKPHSSTSFLK Trigger: CTTCAGAAAGGATGTTGAACTGTGAGGTTTCCTAGCAATTGCCAAATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAACCTCTTACTTCTCTCTACATGCTGCTGCTATAAAAACCCGTTACAGGGGACCAGCTCCATTCACTaGATGGAAATGCTAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SNLLLLSTCCCYKNPLQGTSSIH*MEMLKS Trigger: ACTTTTTAGCATTTCCATTCAGTGAATGGAGCTGGT...CCCCTGTAACGGGTTTTTATAGCAGCAGCATGTAGAGAGAAGTAAGAGGTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGAAAAGAGTATTTCTCAAGAACAAAACTGAAGGTGAGAGAACCTCAGTAGTACACAGCTCCATCTaGAGAAGAGTTTGCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLKRVFLKNKTEGERTSVVHSSI*RRVCTA Trigger: AGCTGTGCAAACTCTTCTTCAGATGGAGCTGTGTAC...TACTGAGGTTCTCTCACCTTCAGTTTTGTTCTTGAGAAATACTCTTTTCAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAACCTCTTACTTCTCTCTACATGCTGCTGCTATAAAAACCCGTTACAGGGGGATAACTTCATAACATaGACAAGTAAGTGCCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SNLLLLSTCCCYKNPLQGDNFIT*TSKCPR Trigger: TCTAGGGCACTTACTTGTGCATGTTATGAAGTTATC...CCCCTGTAACGGGTTTTTATAGCAGCAGCATGTAGAGAGAAGTAAGAGGTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CAA 90 bp | AGTGGGAAAACACAAATCTTAAAGGCCAGTGATTTCGCTTCCTGGTaGTCTGAGATTTTATCGCAAAGCTTTCTACTATGCAGCACGATA | + |
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Preference number: 2 (lower is better) Translates to: SGKTQILKASDFASW*SEILSQSFLLCSTI Trigger: TATCGTGCTGCATAGTAGAAAGCTTTGCGATAAAATCTCAGACAACCAGGAAGCGAAATCACTGGCCTTTAAGATTTGTGTTTTCCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGAAAAGAGTATTTCTCAAGAACAAAACTGAAGGTGAGAGAACCTCAGTACCTATATCTGTGCTTTaGACCTCAGAAGTGAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SLKRVFLKNKTEGERTSVPISVL*TSEVSL Trigger: TAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGG...TACTGAGGTTCTCTCACCTTCAGTTTTGTTCTTGAGAAATACTCTTTTCAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAAGCAACCTCTTACTTCTCTCTACATGCTGCTGCTATAAAAACCCGTTAAATAAATGCCAGGATTaGCTACCTTTTCCAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TRSNLLLLSTCCCYKNPLNKCQD*LPFPSS Trigger: AGAGCTTGGAAAAGGTAGGCAATCCTGGCATTTATT...TAACGGGTTTTTATAGCAGCAGCATGTAGAGAGAAGTAAGAGGTTGCTTCTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAAAAGAGTATTTCTCAAGAACAAAACTGAAGGTGAGAGAACCTCAGTACACTTACGGCTCATTTaGCAATTGCTAGGAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: SLKRVFLKNKTEGERTSVHLRLI*QLLGNL Trigger: GAGGTTTCCTAGCAATTGCCAAATGAGCCGTAAGTG...TACTGAGGTTCTCTCACCTTCAGTTTTGTTCTTGAGAAATACTCTTTTCAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTCGCATTTGTCGCATTTGTTTCCAGCATCAATATCATAAAAATTCCTCAGTACACAGCTCCATCTaGAGAAGAGTTTGCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: SVRICRICFQHQYHKNSSVHSSI*RRVCTA Trigger: AGCTGTGCAAACTCTTCTTCAGATGGAGCTGTGTAC...TGAGGAATTTTTATGATATTGATGCTGGAAACAAATGCGACAAATGCGAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTGTGTATCATTTAAAATaGCAGGCAAATACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LVIMIVRASNCITVHLFIVYHLK*QANTSS Trigger: GGAGCTGGTATTTGCCTGTCATTTTAAATGATACAC...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATGAGATTCTGGCAAAGTaGACAGAAACTGCTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNEILAK*TETALH Trigger: GTGGAGAGCAGTTTCTGTTCACTTTGCCAGAATCTC...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATCCAAAGCTCGAGTGCTaGCTTGAAAACATAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNPKLEC*LENIAP Trigger: AGGTGCTATGTTTTCAAGTCAGCACTCGAGCTTTGG...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCGATAACTTCATAACATaGACAAGTAAGTGCCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: VSFFLSSLKYKGILHLRLDNFIT*TSKCPR Trigger: TCTAGGGCACTTACTTGTGCATGTTATGAAGTTATC...GAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTTTAAGGACTTCAAAGTaGACCACAGTTTACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: LVIMIVRASNCITVHLFILRTSK*TTVYTA Trigger: TGCTGTGTAAACTGTGGTCCACTTTGAAGTCCTTAA...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATCCTATATCTGTGCTTTaGACCTCAGAAGTGAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNPISVL*TSEVSL Trigger: TAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGG...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTATCAAATTCTCTCTCAGAGAGGATGTAGACAAAGCTATAAAAGAAATCCAGGATGCTTCAAACTaGACCAATAATCAAGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: VVIKFSLREDVDKAIKEIQDASN*TNNQGS Trigger: ACTACCTTGATTATTGGTGCAGTTTGAAGCATCCTG...GATTTCTTTTATAGCTTTGTCTACATCCTCTCTGAGAGAGAATTTGATAACCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATTGTTCCAAAGAGAACTaGTTTGAAGGTCAACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNCSKEN*FEGQLS Trigger: TGAGAGTTGACCTTCAAAGCAGTTCTCTTTGGAACA...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAAAAGAGTATTTCTCAAGAACAAAACTGAAGGTGAGAGAACCTCAGTAAAAGATTTCTCACAGTaGAAAAATAAGGAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLKRVFLKNKTEGERTSVKDFSQ*KNKESG Trigger: TCCTGACTCCTTATTTTTCCACTGTGAGAAATCTTT...TACTGAGGTTCTCTCACCTTCAGTTTTGTTCTTGAGAAATACTCTTTTCAGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| 3UTR CAA 90 bp | ATAAACAATGTTCCAAAGAGAACTGCTTTGAAGGTCAACTCTCATTaGGGTGTTAAGATATATCATGCTCATCTTAAAAGGCAATGTGAC | + |
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Preference number: 2 (lower is better) Translates to: INNVPKRTALKVNSH*GVKIYHAHLKRQCD Trigger: GTCACATTGCCTTTTAAGATGAGCATGATATATCTTAACACCCAAATGAGAGTTGACCTTCAAAGCAGTTCTCTTTGGAACATTGTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTATCAAATTCTCTCTCAGAGAGGATGTAGACAAAGCTATAAAAGAAATCTATAAAACAGCATTTTaGATGCCTGTAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VVIKFSLREDVDKAIKEIYKTAF*MPVIPA Trigger: TGCTGGGATTACAGGCATGCAAAATGCTGTTTTATA...GATTTCTTTTATAGCTTTGTCTACATCCTCTCTGAGAGAGAATTTGATAACCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGCACAACTTACAATATGGCGCCTACGTTGCATTTCATATTTTAGATATTACCACACATACAAGGTaGCCCAATATTTTAATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SWHNLQYGAYVAFHILDITTHTR*PNILIC Trigger: GCAAATTAAAATATTGGGCCACCTTGTATGTGTGGT...AATATCTAAAATATGAAATGCAACGTAGGCGCCATATTGTAAGTTGTGCCAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR TCA 72 bp | CCCAGCACTTGGGAGGCAGAGGCAAGCCGATCTCTGTaGGTTCAAGGCCAGCCTCATCTACAGTGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSTWEAEASRSL*VQGQPHLQCEF Trigger: GAACTCACACTGTAGATGAGGCTGGCCTTGAACTCACAGAGATCGGCTTGCCTCTGCCTCCCAAGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | CTGCGGACTCTTGTCTCCGTGCATGTCTTAAGCAGTTaGACAGTGAGAATGCTGCCCTGCTGCTCCCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRTLVSVHVLSS*TVRMLPCCSHY Trigger: GTAATGGGAGCAGCAGGGCAGCATTCTCACTGTGCAACTGCTTAAGACATGCACGGAGACAAGAGTCCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | TGGGATGTCTCCACCAAAGCCCTCTCCTCAGGGCTCTaGGAACCTTATGGAAAACGATGGGGAAAGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: WDVSTKALSSGL*EPYGKRWGKSR Trigger: CCTAGACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTGGTGGAGACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | TGCAGAGAGGGAGACCTTGGCATACTCTGCTTTAAATaGGATGTCTCCACCAAAGCCCTCTCCTCAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CREGDLGILCFK*DVSTKALSSGL Trigger: GAGCCCTGAGGAGAGGGCTTTGGTGGAGACATCCCATTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | CACTGGAGTGATGGCTCAGGGATTAAGAGCACTGACTaGCCTTGTAGAGGACCCAGGATCAATTGCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HWSDGSGIKSTD*PCRGPRINCQL Trigger: AAGCTGGCAATTGATCCTGGGTCCTCTACAAGGGCAGTCAGTGCTCTTAATCCCTGAGCCATCACTCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | CTCTCCTCAGGGCTCTGGGAACCTTATGGAAAACGATaGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSSGLWEPYGKR*GKSRSQRQWRT Trigger: TGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTGGACACATGGCTCTGACCCTAGCTGTGGCTACTGGGATTaGAACTCAGGACCTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPVGVLELKKWTHGSDPSCGYWD*NSGPSE Trigger: TTCAGAAGGTCCTGAGTTCAAATCCCAGTAGCCACA...GCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | GGCATAAAGTGCAGAGAGGGAGACCTTGGCATACTCTaGTTTAAATGGGATGTCTCCACCAAAGCCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GIKCREGDLGIL*FKWDVSTKALS Trigger: GGAGAGGGCTTTGGTGGAGACATCCCATTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCACTTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | CCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTaGCCACCATGTGGCTACTGGGATTTGAACTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PEEGVRSHYRWL*PPCGYWDLNSG Trigger: TCCTGAGTTCAAATCCCAGTAGCCACATGGTGGCCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | GACACACCAGAAGAGGGCGTCAGATCTCATTACAGATaGTTGTGGCCACCATGTGGCTACTGGGATTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DTPEEGVRSHYR*LWPPCGYWDLN Trigger: GTTCAAATCCCAGTAGCCACATGGTGGCCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | GGAAAACGATGGGGAAAGTCTAGGAGTCAGAGGCAATaGAGGACACCAAGGACACAAGGCCTTCTAAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GKRWGKSRSQRQ*RTPRTQGLLNP Trigger: TGGGTTTAGAAGGCCTTGTGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | AAAGCTAAGCCAGTTGGGGTCCTAGAGCTGAAAAAGTaGACACATGGCTCTGACCCTAGCCCAGAAGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: KAKPVGVLELKK*THGSDPSPEVI Trigger: AATAACTTCTGGGCTAGGGTCAGAGCCATGTGTCCACTTTTTCAGCTCTAGGACCCCAACTGGCTTAGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCCCTCTCCTCAGGGCTCTGGGAACCTTATGGAAAACGATGGGGAAAGTCTCGCATTTGTCGCATTaGTTTCCAGCATCAATATCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPLLRALGTLWKTMGKVSHLSH*FPASIS Trigger: TGATATTGATGCTGGAAACAAATGCGACAAATGCGA...GACTTTCCCCATCGTTTTCCATAAGGTTCCCAGAGCCCTGAGGAGAGGGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR TCA 72 bp | ATTTGGGGTAGAGGGGCAAGCAGATCTCTTACAGTTTaGGACCTGCTCTATAAGCCAGGGCTACATAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: IWGRGASRSLTV*DLLYKPGLHSK Trigger: CTTACTATGTAGCCCTGGCTTATAGAGCAGGTCTCAAACTGTAAGAGATCTGCTTGCCCCTCTACCCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR TCA 72 bp | AAACCCACCATGACCAACACACACATGAATTCACAGTaGGGCAGCATGCATGTTCCCTGCATAAAGCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KPTMTNTHMNSQ*GSMHVPCIKLS Trigger: GCTTAGCTTTATGCAGGGAACATGCATGCTGCCTCACTGTGAATTCATGTGTGTGTTGGTCATGGTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | GTTGCTTGTATGCTGATGATAGTAAGACTCTGGATATaGGTAGGGCGGAAAGACAGGATCTGGAAGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VACMLMIVRLWI*VGRKDRIWKEL Trigger: CAACTCCTTCCAGATCCTGTCTTTCCGCCCTACCCATATCCAGAGTCTTACTATCATCAGCATACAAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | ACACACATGCTTTCTGTCTGGGGCAGTCTAATAGCATaGCTTCTATGGCACATGGAAGAAAAGGTCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: THMLSVWGSLIA*LLWHMEEKVSK Trigger: TTTGCTGACCTTTTCTTCCATGTGCCATAGAAGCCATGCTATTAGACTGCCCCAGACAGAAAGCATGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAATAGCATGGCTTCTATGGCACATGGAAGAAAAGGTCAGCAAATGAACGCACTTACGGCTCATTaGGCAATTGCTAGGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: QSNSMASMAHGRKGQQMNALTAH*AIARKP Trigger: AGGTTTCCTAGCAATTGCCAAATGAGCCGTAAGTGC...GTTCATTTGCTGACCTTTTCTTCCATGTGCCATAGAAGCCATGCTATTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | TTCTTTCTGCAGAACCAAACCCACAAAGGCATAAAGTaGAGAGAGGGAGACCTTGGCATACTCTGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FFLQNQTHKGIK*REGDLGILCFK Trigger: TTTAAAGCAGAGTATGCCAAGGTCTCCCTCTCTGCACTTTATGCCTTTGTGGGTTTGGTTCTGCAGAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATTCCTATATCTGTGCTTaGCACCTCAGAAGTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LIFPFLFEVQRDSALTAHSYICA*HLRSEP Trigger: AGGCTCACTTCTGAGGTGCAAAGCACAGATATAGGA...ATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTCGGCTCATTTGGCAATaGCTAGGAAACCTCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVIMIVRASNCITVHLFIRLIWQ*LGNLTV Trigger: AACTGTGAGGTTTCCTAGCAATTGCCAAATGAGCCG...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | TTGAAGTACAAAGGGATTCTGCACTTACGGCTCATTTaGCAATTGCTAGGAAACCTCACAGTTCAACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKYKGILHLRLI*QLLGNLTVQHP Trigger: AGGATGTTGAACTGTGAGGTTTCCTAGCAATTGCCAAATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGCACAACTTACAATATGGCGCCTACGTTGCATTTCATATTTTAGATATTGCATGTCTTAAGCAGTaGCACAGTGAGAATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWHNLQYGAYVAFHILDIACLKQ*HSENAA Trigger: GGCAGCATTCTCACTGTGCAACTGCTTAAGACATGC...AATATCTAAAATATGAAATGCAACGTAGGCGCCATATTGTAAGTTGTGCCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTTCGCATTTGTCGCATTaGTTTCCAGCATCAATATCA | + |
|
Preference number: 3 (lower is better) Translates to: LVIMIVRASNCITVHLFISHLSH*FPASIS Trigger: TGATATTGATGCTGGAAACAAATGCGACAAATGCGA...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | TTGTTTCAAGCTTTGTTCAGTCCTATATCTGTGCTTTaGACCTCAGAAGTGAGCCTATCAAGGCACTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LFQALFSPISVL*TSEVSLSRHLK Trigger: TTTTAAGTGCCTTGATAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGGACTGAACAAAGCTTGAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR CCA 72 bp | TCCATGAGATGTAACACATATCTGACACTGCTCAGGTaGCAATCCAAATACTGTTCTGCTACAATAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SMRCNTYLTLLR*QSKYCSATITE Trigger: TTCAGTTATTGTAGCAGAACAGTATTTGGATTGCCACCTGAGCAGTGTCAGATATGTGTTACATCTCATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTTTTTTCCTTTCCTCTTaGAAGTACAAAGGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVIMIVRASNCITVHLFIFFLSS*KYKGIL Trigger: CAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAA...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR TCA 72 bp | TGCAGGCATATAAGAACCTTCAAGTCTGAGAGCCAATaGCTTCTACAATTTCTGAATTTTAGTATGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CRHIRTFKSESQ*LLQFLNFSMCG Trigger: ACCACACATACTAAAATTCAGAAATTGTAGAAGTCATTGGCTCTCAGACTTGAAGGTTCTTATATGCCTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATATTTGCAGATGTTGCTaGTATGCTGATGATAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNICRCC*YADDSK Trigger: CTTACTATCATCAGCATACAAGCAACATCTGCAAAT...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR GCA 72 bp | CACAGTGGAAAAATAAGGAGTCAGGATGCTTCAAACTaGACCAATAATCAAGGTAGTGTATCATTTAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HSGKIRSQDASN*TNNQGSVSFKM Trigger: CATTTTAAATGATACACTACCTTGATTATTGGTGCAGTTTGAAGCATCCTGACTCCTTATTTTTCCACTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | CGATGGGGAAAGTCTAGGAGTCAGAGGCAATGGAGGACACCAAGGACACAAGGCATATTTTGGTCCAGCTaGCATCACCGGACAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWGKSRSQRQWRTPRTQGIFWSS*HHRTAL Trigger: GAGAGCTGTCCGGTGATGTCAGCTGGACCAAAATAT...GCCTTGTGTCCTTGGTGTCCTCCATTGCCTCTGACTCCTAGACTTTCCCCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CAA 72 bp | ACTGCGGACTCTTGTCTCCGTGCATGTCTTAAGCAGTaGCACAGTGAGAATGCTGCCCTGCTGCTCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TADSCLRACLKQ*HSENAALLLPL Trigger: TAATGGGAGCAGCAGGGCAGCATTCTCACTGTGCAACTGCTTAAGACATGCACGGAGACAAGAGTCCGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | GGACCACAGTTTACACAGCAAAGTACCCAGTCCATCAGCACTTCAGTCAGTTCGATATTTTGGTCCAGCTaGCATCACCGGACAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPQFTQQSTQSISTSVSSIFWSS*HHRTAL Trigger: GAGAGCTGTCCGGTGATGTCAGCTGGACCAAAATAT...CGAACTGACTGAAGTGCTGATGGACTGGGTACTTTGCTGTGTAAACTGTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATTCCGTAGGTTGCCGCTaGCCAGTGTGGCTTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFPFLFEVQRDSALTAHSVGCR*PVWLPH Trigger: ATGCGGAAGCCACACTGGGCAGCGGCAACCTACGGA...ATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR CAA 72 bp | TACAGATGGTTGTGGCCACCATGTGGCTACTGGGATTaGAACTCAGGACCTTCTGAAGAGCAGTTAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRWLWPPCGYWD*NSGPSEEQLVF Trigger: GAACACTAACTGCTCTTCAGAAGGTCCTGAGTTCAAATCCCAGTAGCCACATGGTGGCCACAACCATCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| CDS-3UTR GCA 90 bp | GGACCACAGTTTACACAGCAAAGTACCCAGTCCATCAGCACTTCAGTCAGTTCGTTTTCAATCAGCTCTTaGAGTGGTGCCAACTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPQFTQQSTQSISTSVSSFSISS*SGANSR Trigger: ACGAGAGTTGGCACCACTGCAAGAGCTGATTGAAAA...CGAACTGACTGAAGTGCTGATGGACTGGGTACTTTGCTGTGTAAACTGTGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTTTCTCCTAGTAGTTTGTTGGCTTCAGCCTACTCTGATTGTTTTTAATTCCGTAGGTTGCCGCTaGCCAGTGTGGCTTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGFLLVVCWLQPTLIVFNSVGCR*PVWLPH Trigger: ATGCGGAAGCCACACTGGGCAGCGGCAACCTACGGA...ATTAAAAACAATCAGAGTAGGCTGAAGCCAACAAACTACTAGGAGAAAACCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| 3UTR CAA 72 bp | TTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATTaGGCAATTGCTAGGAAACCTCACAGTTCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: FEVQRDSALTAH*AIARKPHSSTS Trigger: GGATGTTGAACTGTGAGGTTTCCTAGCAATTGCCAAATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | CCTATATCTGTGCTTTGCACCTCAGAAGTGAGCCTATCAAGGCACTTAAAAACAGTTCCATCTGCCCAGTaGTATTCATATTTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PISVLCTSEVSLSRHLKTVPSAQ*YSYFGP Trigger: TGGACCAAAATATGAATATCACTGGGCAGATGGAAC...TGTTTTTAAGTGCCTTGATAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR GCA 90 bp | CCTATATCTGTGCTTTGCACCTCAGAAGTGAGCCTATCAAGGCACTTAAAAACAAGATGTATTGAGATGTaGTTCCTCCTGAAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PISVLCTSEVSLSRHLKTRCIEM*FLLKLD Trigger: ATCCAGCTTCAGGAGGAAGCACATCTCAATACATCT...TGTTTTTAAGTGCCTTGATAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTAATAGCATGGCTTCTATGGCACATGGAAGAAAAGGTCAGCAAATGAACAGATGTATTGAGATGTaGTTCCTCCTGAAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSNSMASMAHGRKGQQMNRCIEM*FLLKLD Trigger: ATCCAGCTTCAGGAGGAAGCACATCTCAATACATCT...GTTCATTTGCTGACCTTTTCTTCCATGTGCCATAGAAGCCATGCTATTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTCTGGTGAGACCCCTCTaGTATGTTCTTCTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVIMIVRASNCITVHLFILVRPL*YVLLWF Trigger: AAACCAAAGAAGAACATACCAGAGGGGTCTCACCAG...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATCTGGTGAGACCCCTCTaGTATGTTCTTCTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIFPFLFEVQRDSALTAHLVRPL*YVLLWF Trigger: AAACCAAAGAAGAACATACCAGAGGGGTCTCACCAG...ATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATCTGTCCTTTGAGGTaGGTTTTTCAATCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFLSSLKYKGILHLRLICPLR*VFQSAL Trigger: AAGAGCTGATTGAAAAACTCACCTCAAAGGACAGAT...GAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTTTTCCTTTCCTCTTTGAAGTACAAAGGGATTCTGCACTTACGGCTCATCTGTACAGAAGTCTGTaGTGGTTCCATAAAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFPFLFEVQRDSALTAHLYRSL*WFHKAY Trigger: ATATGCTTTATGGAACCATCACAGACTTCTGTACAG...ATGAGCCGTAAGTGCAGAATCCCTTTGTACTTCAAAGAGGAAAGGAAAAATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTATCTGTCCTTTGAGGTaGGTTTTTCAATCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVIMIVRASNCITVHLFIICPLR*VFQSAL Trigger: AAGAGCTGATTGAAAAACTCACCTCAAAGGACAGAT...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR CAA 72 bp | ATTGTTTCAAGCTTTGTTCAGTCCTATATCTGTGCTTaGCACCTCAGAAGTGAGCCTATCAAGGCACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IVSSFVQSYICA*HLRSEPIKALK Trigger: TTTAAGTGCCTTGATAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGGACTGAACAAAGCTTGAAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
||
| 3UTR CAA 72 bp | ACTGGCCTGGTTAACAGCAAAGTTAGTGGGCGTGGTTaGGTAGTTAATGTAGTTTCTACTAAGCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGLVNSKVSGRG*VVNVVSTKLQK Trigger: TTTTTGAAGCTTAGTAGAAACTACATTAACTACCAAACCACGCCCACTAACTTTGCTGTTAACCAGGCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| CDS-3UTR TCA 90 bp | AGCCTGAAAAGAGTATTTCTCAAGAACAAAACTGAAGGTGAGAGAACCTCAGTACTGTACAGAAGTCTGTaGTGGTTCCATAAAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: SLKRVFLKNKTEGERTSVLYRSL*WFHKAY Trigger: ATATGCTTTATGGAACCATCACAGACTTCTGTACAG...TACTGAGGTTCTCTCACCTTCAGTTTTGTTCTTGAGAAATACTCTTTTCAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR TCA 90 bp | TCAGTTCGCATTTGTCGCATTTGTTTCCAGCATCAATATCATAAAAATTCCTCATTTTTGCCACTGACATaGAATTCTTCGGGAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: SVRICRICFQHQYHKNSSFLPLT*NSSGME Trigger: TTCCATTCCCGAAGAATTTCATGTCAGTGGCAAAAA...TGAGGAATTTTTATGATATTGATGCTGGAAACAAATGCGACAAATGCGAACTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR TCA 90 bp | TCTTGGCACAACTTACAATATGGCGCCTACGTTGCATTTCATATTTTAGATATTTTTTTGCCACTGACATaGAATTCTTCGGGAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: SWHNLQYGAYVAFHILDIFLPLT*NSSGME Trigger: TTCCATTCCCGAAGAATTTCATGTCAGTGGCAAAAA...AATATCTAAAATATGAAATGCAACGTAGGCGCCATATTGTAAGTTGTGCCAAGA 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| CDS-3UTR GCA 90 bp | TTAGTTAGTGATTATGTGCTTCATTTCCTGTATAGACAGGAATCAAACATCGGAGCAAATGTTGTTAACTaGAACCCACTCATTCAGATC | + |
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Preference number: 4 (lower is better) Translates to: LVSDYVLHFLYRQESNIGANVVN*NPLIQI Trigger: GATCTGAATGAGTGGGTTGCAGTTAACAACATTTGC...TCCGATGTTTGATTCCTGTCTATACAGGAAATGAAGCACATAATCACTAACTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| 3UTR CAA 72 bp | GGAGCTGAAATAAACAATGTTCCAAAGAGAACTGCTTaGAAGGTCAACTCTCATTTGGGTGTTAAGATATAT | + |
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Preference number: 4 (lower is better) Translates to: GAEINNVPKRTA*KVNSHLGVKIY Trigger: ATATATCTTAACACCCAAATGAGAGTTGACCTTCAAAGCAGTTCTCTTTGGAACATTGTTTATTTCAGCTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | CTAGTGATCATGATTGTAAGGGCATCCAACTGTATCACTGTCCACTTGTTCATTACAGCCATCCGTAGGTaGCCGCTGCCCAGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LVIMIVRASNCITVHLFITAIRR*PLPSVA Trigger: AGCCACACTGGGCAGCGGCAACCTACGGATGGCTGT...AATGAACAAGTGGACAGTGATACAGTTGGATGCCCTTACAATCATGATCACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | GGACCACAGTTTACACAGCAAAGTACCCAGTCCATCAGCACTTCAGTCAGTTCGTTTTTCAATCAGCTCTaGCAGTGGTGCCAACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: GPQFTQQSTQSISTSVSSFFNQL*QWCQLS Trigger: CGAGAGTTGGCACCACTGCAAGAGCTGATTGAAAAA...CGAACTGACTGAAGTGCTGATGGACTGGGTACTTTGCTGTGTAAACTGTGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTCGCATTTGTCGCATTTGTTTCCAGCATCAATATCATAAAAATTCCTCAACAGCCATCCGTAGGTaGCCGCTGCCCAGTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SVRICRICFQHQYHKNSSTAIRR*PLPSVA Trigger: AGCCACACTGGGCAGCGGCAACCTACGGATGGCTGT...TGAGGAATTTTTATGATATTGATGCTGGAAACAAATGCGACAAATGCGAACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | GACCTACTGCTAATGGCAAACACTCCACTCAGTTTCTCTTCACCACCACCACTCAGTGATATTCATATTTaGGTCCAGCTGACATCACCG | + |
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Preference number: 5 (lower is better) Translates to: DLLLMANTPLSFSSPPPLSDIHI*VQLTSP Trigger: CGGTGATGTCAGCTGGACCAAAATATGAATATCACT...GAGTGGTGGTGGTGAAGAGAAACTGAGTGGAGTGTTTGCCATTAGCAGTAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | GGACCACAGTTTACACAGCAAAGTACCCAGTCCATCAGCACTTCAGTCAGTTCGACTCTAAAGAGTCGTTaGAGTATTGTTTTTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: GPQFTQQSTQSISTSVSSTLKSR*SIVFAT Trigger: AGTGGCAAAAACAATACTCAAACGACTCTTTAGAGT...CGAACTGACTGAAGTGCTGATGGACTGGGTACTTTGCTGTGTAAACTGTGGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | CCTATATCTGTGCTTTGCACCTCAGAAGTGAGCCTATCAAGGCACTTAAAAACAAGTGATATTCATATTTaGGTCCAGCTGACATCACCG | + |
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Preference number: 5 (lower is better) Translates to: PISVLCTSEVSLSRHLKTSDIHI*VQLTSP Trigger: CGGTGATGTCAGCTGGACCAAAATATGAATATCACT...TGTTTTTAAGTGCCTTGATAGGCTCACTTCTGAGGTGCAAAGCACAGATATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTCGCATTTGTCGCATTTGTTTCCAGCATCAATATCATAAAAATTCCTCATTTTTCAATCAGCTCTaGCAGTGGTGCCAACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: SVRICRICFQHQYHKNSSFFNQL*QWCQLS Trigger: CGAGAGTTGGCACCACTGCAAGAGCTGATTGAAAAA...TGAGGAATTTTTATGATATTGATGCTGGAAACAAATGCGACAAATGCGAACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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| CDS TCA 72 bp | AACTCTAAAGAGTCGTTTGAGTATTGTTTTTGCCACTaGCATGAAATTCTTCGGGAATGGAACACCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: NSKESFEYCFCH*HEILREWNTNF Trigger: AAAATTGGTGTTCCATTCCCGAAGAATTTCATGTCAGTGGCAAAAACAATACTCAAACGACTCTTTAGAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006424.8 ENSMUST00000113229.8 |
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