Pregenerated sensors for MOAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096458

Ensembl transcript IDs: ENSMUST00000173760.9, ENSMUST00000178384.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ACCTCTTCTTCTTCGGCCTCCTTATCTTTTATCAGTGTCAGCAACTaGAGTAAGCCTGGGGCTGGGCTACCCTCCGGCAGCCCAAGCTCT	+
Preference number: 5 (lower is better) Translates to: TSSSSASLSFISVSN*SKPGAGLPSGSPSS Trigger: AGAGCTTGGGCTGCCGGAGGGTAGCCCAGCCCCAGGCTTACTGCAGTTGCTGACACTGATAAAAGATAAGGAGGCCGAAGAAGAAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS TCA 90 bp	CCAAGATTCAAATTCTTCCTCACCTGGTCCTGGAGGATCCCTGCCTaGGAACACACTCAGCTTTTTGTACCTCAGATACTGCAGGGTAGG	+
Preference number: 5 (lower is better) Translates to: PRFKFFLTWSWRIPA*EHTQLFVPQILQGR Trigger: CCTACCCTGCAGTATCTGAGGTACAAAAAGCTGAGTGTGTTCTCAGGCAGGGATCCTCCAGGACCAGGTGAGGAAGAATTTGAATCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS TCA 90 bp	TGGACCTCTAAGGCTCTCTATCAACCGCCTTCTTTTCTCTACATCTaGCACCTGCCATGTTTTCATTACTTGGGAAGTATGAAACATCCA	+
Preference number: 5 (lower is better) Translates to: WTSKALYQPPSFLYI*HLPCFHYLGSMKHP Trigger: TGGATGTTTCATACTTCCCAAGTAATGAAAACATGGCAGGTGTCAGATGTAGAGAAAAGAAGGCGGTTGATAGAGAGCCTTAGAGGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS GCA 90 bp	CTTTTCATCAGTCTTCTGATAAGTAGTAAGGTATTTGACCTGCAATaGTCTAGGATTATCAATAATCCCAAATATTGTCTCAAGCGTCTT	+
Preference number: 5 (lower is better) Translates to: LFISLLISSKVFDLQ*SRIINNPKYCLKRL Trigger: AAGACGCTTGAGACAATATTTGGGATTATTGATAATCCTAGAGCATTGCAGGTCAAATACCTTACTACTTATCAGAAGACTGATGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS GCA 72 bp	AGCAGTCTGTGTTCCCCTAAGGGAGCAAGGCCAGCCTaGAGGGCCTCCTCTATGTCTGCCACTCCGCAGGTC	+
Preference number: 6 (lower is better) Translates to: SSLCSPKGARPA*RASSMSATPQV Trigger: GACCTGCGGAGTGGCAGACATAGAGGAGGCCCTGCAGGCTGGCCTTGCTCCCTTAGGGGAACACAGACTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CCA 72 bp	CCCTCCGGCAGCCCAAGCTCTCTTCGAACTGATTTGTaGACTGCCCCAGCAATGACTTGGTCTAGACGGGCC	+
Preference number: 6 (lower is better) Translates to: PSGSPSSLRTDL*TAPAMTWSRRA Trigger: GGCCCGTCTAGACCAAGTCATTGCTGGGGCAGTCCACAAATCAGTTCGAAGAGAGCTTGGGCTGCCGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS GCA 72 bp	TCTTCGGCCTCCTTATCTTTTATCAGTGTCAGCAACTaGAGTAAGCCTGGGGCTGGGCTACCCTCCGGCAGC	+
Preference number: 6 (lower is better) Translates to: SSASLSFISVSN*SKPGAGLPSGS Trigger: GCTGCCGGAGGGTAGCCCAGCCCCAGGCTTACTGCAGTTGCTGACACTGATAAAAGATAAGGAGGCCGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 72 bp	CTACCCTCCGGCAGCCCAAGCTCTCTTCGAACTGATTaGTGGACTGCCCCAGCAATGACTTGGTCTAGACGG	+
Preference number: 6 (lower is better) Translates to: LPSGSPSSLRTD*WTAPAMTWSRR Trigger: CCGTCTAGACCAAGTCATTGCTGGGGCAGTCCACAAATCAGTTCGAAGAGAGCTTGGGCTGCCGGAGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 72 bp	ATCACTCTCCAGACACCTCCTTTTGCAGGTATTTCCTaGGGGACCAGGGCACTGCCAGTCTCTACTGTAAGC	+
Preference number: 6 (lower is better) Translates to: ITLQTPPFAGIS*GTRALPVSTVS Trigger: GCTTACAGTAGAGACTGGCAGTGCCCTGGTCCCCAAGGAAATACCTGCAAAAGGAGGTGTCTGGAGAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 90 bp	GGCTTAAAGATCACTCTCCAGACACCTCCTTTTGCAGGTATTTCCTaGGGGACCAGGGCACTGCCAGTCTCTACTGTAAGCCCAATCAGG	+
Preference number: 6 (lower is better) Translates to: GLKITLQTPPFAGIS*GTRALPVSTVSPIR Trigger: CCTGATTGGGCTTACAGTAGAGACTGGCAGTGCCCTGGTCCCCAAGGAAATACCTGCAAAAGGAGGTGTCTGGAGAGTGATCTTTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 90 bp	TCACCTGGTCCTGGAGGATCCCTGCCTGAGAACACACTCAGCTTTTaGTACCTCAGATACTGCAGGGTAGGCTTAAGGGCCTCATTTAAT	+
Preference number: 6 (lower is better) Translates to: SPGPGGSLPENTLSF*YLRYCRVGLRASFN Trigger: ATTAAATGAGGCCCTTAAGCCTACCCTGCAGTATCTGAGGTACAAAAAGCTGAGTGTGTTCTCAGGCAGGGATCCTCCAGGACCAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS TCA 72 bp	GCTCTCTTCGAACTGATTTGTGGACTGCCCCAGCAATaGCTTGGTCTAGACGGGCCTGATTCACAACTTCTT	+
Preference number: 6 (lower is better) Translates to: ALFELICGLPQQ*LGLDGPDSQLL Trigger: AAGAAGTTGTGAATCAGGCCCGTCTAGACCAAGTCATTGCTGGGGCAGTCCACAAATCAGTTCGAAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 72 bp	CCAGTCTCTACTGTAAGCCCAATCAGGGCTACATTCTaGTTCTCATCCCTCCTGAACATCCTCCCAAGCAGT	+
Preference number: 6 (lower is better) Translates to: PVSTVSPIRATF*FSSLLNILPSS Trigger: ACTGCTTGGGAGGATGTTCAGGAGGGATGAGAACAAGAATGTAGCCCTGATTGGGCTTACAGTAGAGACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS GCA 72 bp	ATTCAAATTCTTCCTCACCTGGTCCTGGAGGATCCCTaGCTGAGAACACACTCAGCTTTTTGTACCTCAGAT	+
Preference number: 6 (lower is better) Translates to: IQILPHLVLEDP*LRTHSAFCTSD Trigger: ATCTGAGGTACAAAAAGCTGAGTGTGTTCTCAGGCAGGGATCCTCCAGGACCAGGTGAGGAAGAATTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS TCA 72 bp	AAGGCTCTCTATCAACCGCCTTCTTTTCTCTACATCTaGCACCTGCCATGTTTTCATTACTTGGGAAGTATG	+
Preference number: 6 (lower is better) Translates to: KALYQPPSFLYI*HLPCFHYLGSM Trigger: CATACTTCCCAAGTAATGAAAACATGGCAGGTGTCAGATGTAGAGAAAAGAAGGCGGTTGATAGAGAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS GCA 72 bp	GATTCCCAAGAACTCTGGTTAATTCACCCATCGTCATaGCCTCCCCCTTTAAAAACTCATTTAATCTGCACA	+
Preference number: 6 (lower is better) Translates to: DSQELWLIHPSS*PPPLKTHLICT Trigger: TGTGCAGATTAAATGAGTTTTTAAAGGGGGAGGGCATGACGATGGGTGAATTAACCAGAGTTCTTGGGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CCA 72 bp	GTTGTTTATCTTGAGGACTCGAATAATTTCAAATGCTaGACCTCTAAGGCTCTCTATCAACCGCCTTCTTTT	+
Preference number: 6 (lower is better) Translates to: VVYLEDSNNFKC*TSKALYQPPSF Trigger: AAAAGAAGGCGGTTGATAGAGAGCCTTAGAGGTCCAGCATTTGAAATTATTCGAGTCCTCAAGATAAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2
CDS CAA 72 bp	AGCGTCTTCAGGCATTCTGCAACTGTAATGAAGGGGTaGTTTATCTTGAGGACTCGAATAATTTCAAATGCT	+
Preference number: 6 (lower is better) Translates to: SVFRHSATVMKG*FILRTRIISNA Trigger: AGCATTTGAAATTATTCGAGTCCTCAAGATAAACAACCCCTTCATTACAGTTGCAGAATGCCTGAAGACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000173760.9 ENSMUST00000178384.2