Pregenerated sensors for MNX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001566Ensembl transcript IDs: ENSMUST00000001608.8, ENSMUST00000165512.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCGAGGTCCCAAAAAGGATCCGCAGCCCAGCCTGCACTTGGATaGATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGGCCATAGG | + |
|
Preference number: 1 (lower is better) Translates to: PSRSQKGSAAQPALG*MVRGEAVSLAAGHR Trigger: CCTATGGCCTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGCGGATCCTTTTTGGGACCTCGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR CCA 90 bp | CGAGGTCCCAAAAAGGATCCGCAGCCCAGCCTGCACTTGGATGCATaGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGGCCATAGGATGG | + |
|
Preference number: 1 (lower is better) Translates to: RGPKKDPQPSLHLDA*FGERLSAWLQAIGW Trigger: CCATCCTATGGCCTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGCGGATCCTTTTTGGGACCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR CCA 90 bp | CACCCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTaGGTTCGCGAAGATAAGCTAGAGGCAGAGCACTTACTCAGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: HPTTKTVRSHKICIF*VREDKLEAEHLLSL Trigger: CAAGCTGAGTAAGTGCTCTGCCTCTAGCTTATCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACTCTCTCATTCTCTCTTaGTGTCCCCTCGAGGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EGRVRQEPLLERVGSPRYSLILS*CPLEVP Trigger: TGGGACCTCGAGGGGACAGCAAGAGAGAATGAGAGA...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR-3UTR GCA 90 bp | CACCCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCCAGCCTGCACTTGGATaGATGGTTCGGGGAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HPTTKTVRSHKICIFWVRQPALG*MVRGEA Trigger: AGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTG...GCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| 3UTR CAA 90 bp | TTCTGGGTTCGCGAAGATAAGCTAGAGGCAGAGCACTTACTCAGCTaGCACAAGGCCCTGGGTTCAGTCCCCCTCCTTCCAAAATTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FWVREDKLEAEHLLS*HKALGSVPLLPKLK Trigger: CTTTAATTTTGGAAGGAGGGGGACTGAACCCAGGGCCTTGTGCAAGCTGAGTAAGTGCTCTGCCTCTAGCTTATCTTCGCGAACCCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGAGAGGCTGTCAGCCTaGCTGCAGGCCATAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: PPSVLNFQQNGCLQRRVQERLSA*LQAIGW Trigger: CCATCCTATGGCCTGCAGCCAGGCTGACAGCCTCTC...TTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACACGAAAAGCTCACATTaGAGCTCCTCTCTCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: EGRVRQEPLLERVGSPRYTKSSH*SSSLIL Trigger: GAGAATGAGAGAGGAGCTCCAATGTGAGCTTTTCGT...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTGAGAGGCTGTCAGCCTaGCTGCAGGCCATAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLERLSA*LQAIGW Trigger: CCATCCTATGGCCTGCAGCCAGGCTGACAGCCTCTC...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTCAGCCTGCACTTGGATaGATGGTTCGGGGAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLCFKFSAEWLSPKEGSSQPALG*MVRGEA Trigger: AGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTG...ACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR CCA 72 bp | GAGGTCCCAAAAAGGATCCGCAGCCCAGCCTGCACTTaGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EVPKRIRSPACT*MHGSGRGCQPG Trigger: GCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGCGGATCCTTTTTGGGACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR GCA 72 bp | TCCCAAAAAGGATCCGCAGCCCAGCCTGCACTTGGATaGATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQKGSAAQPALG*MVRGEAVSLAA Trigger: TGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGCGGATCCTTTTTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR CCA 72 bp | CACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTaGCTGCAGGCCATAGGATGGGATTGTAAACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HLDAWFGERLSA*LQAIGWDCKLP Trigger: GGGGAGTTTACAATCCCATCCTATGGCCTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR GCA 72 bp | CACCCCACAACCAAGACAGTCAGATCTCACAAGATTTaGATTTTCTGGGTTCGCGAAGATAAGCTAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HPTTKTVRSHKI*IFWVREDKLEA Trigger: TGCCTCTAGCTTATCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| 3UTR CCA 72 bp | CCACTCCTAGAAAGGGTAGGTTCTCCCAGATACCTCTaGCCAACATCACCCGAAATTAAATGTATAAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: PLLERVGSPRYL*PTSPEIKCIRT Trigger: CGTTCTTATACATTTAATTTCGGGTGATGTTGGCCAGAGGTATCTGGGAGAACCTACCCTTTCTAGGAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGCCGCCGCCGCCCTTCTaGTTCTCCGCCTCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLDAWFGERLSAWLQPPPPF*FSASCA Trigger: TGCGCAGGAGGCGGAGAAGCAGAAGGGCGGCGGCGG...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGCACCGGGCGCTGCAGTaGCCTCCGAGGATGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLDAWFGERLSAWLQHRALQ*PPRMRD Trigger: GTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTG...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGGAAAGCGCCGGGTGCTaGCCAGCTAGCGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLDAWFGERLSAWLQESAGC*PASAAA Trigger: AGCGGCCGCGCTAGCTGGCCAGCACCCGGCGCTTTC...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGTGCAGCCAGCAAGCGTaGGGGCGACGGGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLHLDAWFGERLSAWLQCSQQA*GRRALS Trigger: GCTGAGAGCCCGTCGCCCCCACGCTTGCTGGCTGCA...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTCCAGGAATCCGGGCTTaGGCAGCAGCGCGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQPALGCMVRGEAVSLAPGIRA*AAARSV Trigger: CACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGG...AGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACTGCCGCCTTTGCCGGTaGCCCCGCCGCCGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGRVRQEPLLERVGSPRYCRLCR*PRRRPS Trigger: AGAAGGGCGGCGGCGGGGGCACCGGCAAAGGCGGCA...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| 3UTR CAA 72 bp | CGAGGTCCCAAAAAGGATCCGCAGCCCAGCCTGCACTaGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPKKDPQPSLH*DAWFGERLSAW Trigger: CCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGCGGATCCTTTTTGGGACCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACATAGAGAGCCGCCTGTaGAGGGAGGCCCGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRVRQEPLLERVGSPRYIESRL*REARAA Trigger: GGCGGCGCGGGCCTCCCTGCACAGGCGGCTCTCTAT...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CGAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACCGCCGCCGCCCTTCTaGTTCTCCGCCTCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKSQAGATPRKGRFSQIPPPPF*FSASCA Trigger: TGCGCAGGAGGCGGAGAAGCAGAAGGGCGGCGGCGG...TATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCATTCTCTCTTGCTGTCCCCTCGAGGTCCCAAAAAGGATCCGCAGCCCCTGCACCTGAGGGTATaGGTAGGAAAGCGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSLLLSPRGPKKDPQPLHLRV*VGKRRV Trigger: CACCCGGCGCTTTCCTACTCATACCCTCAGGTGCAG...GGGCTGCGGATCCTTTTTGGGACCTCGAGGGGACAGCAAGAGAGAATGAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CGAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACCAGGAATCCGGGCTTaGGCAGCAGCGCGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKSQAGATPRKGRFSQIPGIRA*AAARSV Trigger: CACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGG...TATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | GTTCGCGAAGATAAGCTAGAGGCAGAGCACTTACTCAGCTTGCACAAGGCCCTGGACGCGCGCAGCCACTaGTCCAGTTGGAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VREDKLEAEHLLSLHKALDARSH*SSWKVL Trigger: CAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTC...CAGGGCCTTGTGCAAGCTGAGTAAGTGCTCTGCCTCTAGCTTATCTTCGCGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTCCAGCAGGGCGTCGATaGGGAAATTTTTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAQPALGCMVRGEAVSLAPAGRR*GNFWIF Trigger: AAAAATCCAAAAATTTCCGCATCGACGCCCTGCTGG...AGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGATAAGCGAGGCGCGCTCTGCGTaGAGGCGGCTCGCGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRQSDLTRFAFSGFAKISEARSA*RRLAGD Trigger: ATCCCCCGCGAGCCGCCTCCACGCAGAGCGCGCCTC...GCTTATCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGAGAAAGCGCCGGGTGCTaGCCAGCTAGCGCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNQDSQISQDLHFLGSRRESAGC*PASAAA Trigger: AGCGGCCGCGCTAGCTGGCCAGCACCCGGCGCTTTC...TCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCTGCCGCCTTTGCCGGTaGCCCCGCCGCCGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSCRLCR*PRRRPS Trigger: AGAAGGGCGGCGGCGGGGGCACCGGCAAAGGCGGCA...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTGAGGCGCGCTCTGCGTaGAGGCGGCTCGCGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCFKFSAEWLSPKEGSSEARSA*RRLAGD Trigger: ATCCCCCGCGAGCCGCCTCCACGCAGAGCGCGCCTC...ACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACGCGCAGCCTGCTCTTTaGCCTTTTTGCTGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRVRQEPLLERVGSPRYAQPAL*PFCCVS Trigger: GGAAACGCAGCAAAAAGGCCAAAGAGCAGGCTGCGC...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCATTCTCTCTTGCTGTCCCCTCGAGGTCCCAAAAAGGATCCGCAGCCCCTTTGGCCTTTTTGCTaGGTTTCCATTTCATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHSLLLSPRGPKKDPQPLWPFC*VSISFG Trigger: GCCGAATGAAATGGAAACGCAGCAAAAAGGCCAAAG...GGGCTGCGGATCCTTTTTGGGACCTCGAGGGGACAGCAAGAGAGAATGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAAGCCACTGGTCCAGTTaGAAGGTGCTGGCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTVRSHKICIFWVRESHWSS*KVLAPS Trigger: GCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCT...TTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR TCA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCACAGCTGCTGGCTGGTaGAGGCCGTGCGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSTAAGW*RPCEAF Trigger: GAAGGCCTCGCACGGCCTTCACCAGCCAGCAGCTGT...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTACAGCTGCTGGCTGGTaGAGGCCGTGCGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFKFSAEWLSPKEGSSTAAGW*RPCEAF Trigger: GAAGGCCTCGCACGGCCTTCACCAGCCAGCAGCTGT...ACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCATTCTCTCTTGCTGTCCCCTCGAGGTCCCAAAAAGGATCCGCAGCCCGCTCTTTGGCCTTTTTaGTGCGTTTCCATTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHSLLLSPRGPKKDPQPALWPF*CVSISF Trigger: GAATGAAATGGAAACGCAGCAAAAAGGCCAAAGAGC...GGGCTGCGGATCCTTTTTGGGACCTCGAGGGGACAGCAAGAGAGAATGAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTCACCGGGCGCTGCAGTaGCCTCCGAGGATGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLNFQQNGCLQRRVQVSHRALQ*PPRMRD Trigger: GTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTG...AGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR TCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTACTGCGCCTGGGAGCTaGAGTCCGGCATCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLTAPGS*SPASWA Trigger: TGCCCAAGATGCCGGACTTCAGCTCCCAGGCGCAGT...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTGACGCGCGCAGCCACTaGTCCAGTTGGAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLDARSH*SSWKVL Trigger: CAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTC...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGCGCAGCCTGCTCTTTaGCCTTTTTGCTGCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTTKTVRSHKICIFWVREAQPAL*PFCCVS Trigger: GGAAACGCAGCAAAAAGGCCAAAGAGCAGGCTGCGC...TTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR TCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTCTGCACCTGAGGGTATaGGTAGGAAAGCGCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLLHLRV*VGKRRV Trigger: CACCCGGCGCTTTCCTACTCATACCCTCAGGTGCAG...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTAGCCACTGGTCCAGTTaGAAGGTGCTGGCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLSHWSS*KVLAPS Trigger: GCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCT...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CACCCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGCTCTTTGGCCTTTTTaGTGCGTTTCCATTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HPTTKTVRSHKICIFWVRALWPF*CVSISF Trigger: GAATGAAATGGAAACGCAGCAAAAAGGCCAAAGAGC...GCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAACCACCTCAAAACGCTTaGGTCGAGACAGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSVLNFQQNGCLQRRVQPPQNA*VETGTC Trigger: ACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGG...TTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | CACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGACCAGCAGGGCGTCGATaGGGAAATTTTTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HNQDSQISQDLHFLGSRRPAGRR*GNFWIF Trigger: AAAAATCCAAAAATTTCCGCATCGACGCCCTGCTGG...TCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAATTGTTGAGCTTGAACTaGTGTTCCAGCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSVLNFQQNGCLQRRVQLLSLN*CSSSNS Trigger: GCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAA...TTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCCCACCTCAAAACGCTTaGGTCGAGACAGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSPPQNA*VETGTC Trigger: ACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGG...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CCA 90 bp | AATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTAGGTCACTTTTGTTGAGCTTGAACTaGTGTTCCAGCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQQNGCLQRRVQVSRSLLLSLN*CSSSNS Trigger: GCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAA...AAGTGACCTAGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTCTTTGGCCTTTTTGCTaGGTTTCCATTTCATTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFKFSAEWLSPKEGSSLWPFC*VSISFG Trigger: GCCGAATGAAATGGAAACGCAGCAAAAAGGCCAAAG...ACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 90 bp | GCGTGGGGGCGACGGGCTCTCAGCTCTCAGCCGGTCACCGGGCGCTaGAGTGGCCTCCGAGGATGCGGGACTGCAGCTACGGCTCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AWGRRALSSQPVTGR*SGLRGCGTAATARP Trigger: GGGGCGAGCCGTAGCTGCAGTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTGACCGGCTGAGAGCTGAGAGCCCGTCGCCCCCACGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 90 bp | TCCTCCGGCGCCCAGGAATCCGGGCTTGGGCAGCAGCGCGCAGTGTaGAGCCAGCAAGCGTGGGGGCGACGGGCTCTCAGCTCTCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSGAQESGLGQQRAV*SQQAWGRRALSSQP Trigger: CGGCTGAGAGCTGAGAGCCCGTCGCCCCCACGCTTGCTGGCTGCACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGGGCGCCGGAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 90 bp | GAATCCGGGCTTGGGCAGCAGCGCGCAGTGTGCAGCCAGCAAGCGTaGGGGCGACGGGCTCTCAGCTCTCAGCCGGTCACCGGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESGLGQQRAVCSQQA*GRRALSSQPVTGRC Trigger: GCAGCGCCCGGTGACCGGCTGAGAGCTGAGAGCCCGTCGCCCCCACGCTTGCTGGCTGCACACTGCGCGCTGCTGCCCAAGCCCGGATTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 90 bp | CCGAAACCGGAGGCCCCATCAGCTCCTCTTCCGTCTTCTCCTCACTaGCGCCTTTGCCGGTGCCCCCGCCGCCGCCCTTCTGCTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKPEAPSAPLPSSPH*RLCRCPRRRPSASP Trigger: CGGAGAAGCAGAAGGGCGGCGGCGGGGGCACCGGCAAAGGCGGCAGTGAGGAGAAGACGGAAGAGGAGCTGATGGGGCCTCCGGTTTCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 90 bp | CTCATCAGGGTCACTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTTaGCTTGTCCCCCGAAACCGGAGGCCCCATCAGCTCCTCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LIRVTVPQVPQATAA*LVPRNRRPHQLLFR Trigger: ACGGAAGAGGAGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAGTGACCCTGATGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGGTGCTGGCACCCAGCTaGATGGGGTCGGCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLHLDAWFGERLSAWLQVLAPS*MGSAGC Trigger: GCACCCTGCCGACCCCATCAAGCTGGGTGCCAGCAC...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 90 bp | GGCATCTTGGGCAGGATCATGCCCGCAGTAGACGCGCGCAGCCACTaGTCCAGTTGGAAGGTGCTGGCACCCAGCTTGATGGGGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GILGRIMPAVDARSH*SSWKVLAPSLMGSA Trigger: TGCCGACCCCATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTCTACTGCGGGCATGATCCTGCCCAAGATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCATTCTCTCTTGCTGTCCCCTCGAGGTCCCAAAAAGGATCCGCAGCCCCCCAGGAATCCGGGCTaGGGCAGCAGCGCGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHSLLLSPRGPKKDPQPPRNPG*GSSAQC Trigger: ACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGGG...GGGCTGCGGATCCTTTTTGGGACCTCGAGGGGACAGCAAGAGAGAATGAGAGAG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCCACCTCAAAACGCTaGGGTCGAGACAGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAQPALGCMVRGEAVSLAATSKR*GRDRYL Trigger: CAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGC...AGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACCCCAGGAATCCGGGCTaGGGCAGCAGCGCGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EGRVRQEPLLERVGSPRYPRNPG*GSSAQC Trigger: ACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGGG...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 90 bp | GGAGGAGGCGAGTCGTCCTCAGATGAGCAGTCGGATGAGGCAGCATaGGCACCGGCACCATTGCTGTACGGGAAGTTGTCCTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGESSSDEQSDEAA*APAPLLYGKLSSSS Trigger: TGAAGAAGAGGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGACTGCTCATCTGAGGACGACTCGCCTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTGCACTTGGATGCATGGTTCGGGGAGAGGCTGTCAGCCTGGCTGCAGCGAGACAGGTACTTGTaGAGCTTGAACTGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLHLDAWFGERLSAWLQRDRYL*SLNWCS Trigger: GGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCG...CTGCAGCCAGGCTGACAGCCTCTCCCCGAACCATGCATCCAAGTGCAGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATACCAGCCACTGGTCCAGTaGGAAGGTGCTGGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGRVRQEPLLERVGSPRYQPLVQ*EGAGTQ Trigger: CTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCTG...GTATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 90 bp | CCTCAGATGAGCAGTCGGATGAGGCAGCATGGGCACCGGCACCATTaGTGTACGGGAAGTTGTCCTCTTCTTCATCATCCTCGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQMSSRMRQHGHRHH*CTGSCPLLHHPRPH Trigger: ATGAGGACGAGGATGATGAAGAAGAGGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGACTGCTCATCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | AAGATTTGCATTTTCTGGGTTCGCGAAGATAAGCTAGAGGCAGAGCACTTACTCGTGCTGGCACCCAGCTaGATGGGGTCGGCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KICIFWVREDKLEAEHLLVLAPS*MGSAGC Trigger: GCACCCTGCCGACCCCATCAAGCTGGGTGCCAGCAC...GAGTAAGTGCTCTGCCTCTAGCTTATCTTCGCGAACCCAGAAAATGCAAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CGAAGGAAGAGTCAGGCAGGAGCCACTCCTAGAAAGGGTAGGTTCTCCCAGATAGGTCGAGACAGGTACTaGTTGAGCTTGAACTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRKSQAGATPRKGRFSQIGRDRY*LSLNWC Trigger: ACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACC...TATCTGGGAGAACCTACCCTTTCTAGGAGTGGCTCCTGCCTGACTCTTCCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | AAGATTTGCATTTTCTGGGTTCGCGAAGATAAGCTAGAGGCAGAGCACTTACTCCTGAAGTCCGGCATCTaGGGCAGGATCATGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KICIFWVREDKLEAEHLLLKSGI*GRIMPA Trigger: TGCGGGCATGATCCTGCCCAAGATGCCGGACTTCAG...GAGTAAGTGCTCTGCCTCTAGCTTATCTTCGCGAACCCAGAAAATGCAAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAACTGAAGTCCGGCATCTaGGGCAGGATCATGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPSVLNFQQNGCLQRRVQLKSGI*GRIMPA Trigger: TGCGGGCATGATCCTGCCCAAGATGCCGGACTTCAG...TTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGAGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCCACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGCCACCTCAAAACGCTaGGGTCGAGACAGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTKTVRSHKICIFWVREATSKR*GRDRYL Trigger: CAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGC...TTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CACAACCAAGACAGTCAGATCTCACAAGATTTGCATTTTCTGGGTTCGCGAAGAAGGTACTTGTTGAGCTaGAACTGGTGTTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HNQDSQISQDLHFLGSRRRYLLS*NWCSSS Trigger: GGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCT...TCTTCGCGAACCCAGAAAATGCAAATCTTGTGAGATCTGACTGTCTTGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCTGCGCAGCCTGCTCTTaGGCCTTTTTGCTGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSCAACS*AFLLRF Trigger: GAAACGCAGCAAAAAGGCCAAAGAGCAGGCTGCGCA...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCAGGTACTTGTTGAGCTaGAACTGGTGTTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSRYLLS*NWCSSS Trigger: GGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCT...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | CCAACATCACCCGAAATTAAATGTATAAGAACGAAAAGCTCACATTGGAGCTCCCGAGACAGGTACTTGTaGAGCTTGAACTGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSPEIKCIRTKSSHWSSRDRYL*SLNWCS Trigger: GGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCG...GGAGCTCCAATGTGAGCTTTTCGTTCTTATACATTTAATTTCGGGTGATGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS-3UTR CAA 90 bp | TCTGTTTTAAATTTTCAGCAGAATGGTTGTCTCCAAAGGAGGGTTCAAGTTTCTGGTCGAGACAGGTACTaGTTGAGCTTGAACTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVLNFQQNGCLQRRVQVSGRDRY*LSLNWC Trigger: ACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACC...AGAAACTTGAACCCTCCTTTGGAGACAACCATTCTGCTGAAAATTTAAAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 72 bp | CGCCGCCGCCTCCTCCGGCGCCCAGGAATCCGGGCTTaGGCAGCAGCGCGCAGTGTGCAGCCAGCAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRRLLRRPGIRA*AAARSVQPASV Trigger: CACGCTTGCTGGCTGCACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGGGCGCCGGAGGAGGCGGCGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 72 bp | CAGCCGGTCACCGGGCGCTGCAGTGGCCTCCGAGGATaGGGGACTGCAGCTACGGCTCGCCCCGCTACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QPVTGRCSGLRG*GTAATARPATG Trigger: ACCAGTAGCGGGGCGAGCCGTAGCTGCAGTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTGACCGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 72 bp | GCCCAGGAATCCGGGCTTGGGCAGCAGCGCGCAGTGTaGAGCCAGCAAGCGTGGGGGCGACGGGCTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQESGLGQQRAV*SQQAWGRRALS Trigger: GCTGAGAGCCCGTCGCCCCCACGCTTGCTGGCTGCACACTGCGCGCTGCTGCCCAAGCCCGGATTCCTGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 72 bp | CGACGGGCTCTCAGCTCTCAGCCGGTCACCGGGCGCTaGAGTGGCCTCCGAGGATGCGGGACTGCAGCTACG | + |
|
Preference number: 6 (lower is better) Translates to: RRALSSQPVTGR*SGLRGCGTAAT Trigger: CGTAGCTGCAGTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTGACCGGCTGAGAGCTGAGAGCCCGTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 72 bp | GGCTCTCAGCTCTCAGCCGGTCACCGGGCGCTGCAGTaGCCTCCGAGGATGCGGGACTGCAGCTACGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSQLSAGHRALQ*PPRMRDCSYGS Trigger: CGAGCCGTAGCTGCAGTCCCGCATCCTCGGAGGCCACTGCAGCGCCCGGTGACCGGCTGAGAGCTGAGAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 72 bp | CTTGGGCAGCAGCGCGCAGTGTGCAGCCAGCAAGCGTaGGGGCGACGGGCTCTCAGCTCTCAGCCGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LGQQRAVCSQQA*GRRALSSQPVT Trigger: GGTGACCGGCTGAGAGCTGAGAGCCCGTCGCCCCCACGCTTGCTGGCTGCACACTGCGCGCTGCTGCCCAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS TCA 72 bp | GCCACTGGTCCAGTTGGAAGGTGCTGGCACCCAGCTTaGTGGGGTCGGCAGGGTGCGCAGGGTGCGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ATGPVGRCWHPA*WGRQGAQGARP Trigger: AGGGCGCGCACCCTGCGCACCCTGCCGACCCCATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS GCA 72 bp | GTCACTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTTaGCTTGTCCCCCGAAACCGGAGGCCCCATCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VTVPQVPQATAA*LVPRNRRPHQL Trigger: GAGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAGTGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | AGCCACTGGTCCAGTTGGAAGGTGCTGGCACCCAGCTaGATGGGGTCGGCAGGGTGCGCAGGGTGCGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHWSSWKVLAPS*MGSAGCAGCAP Trigger: GGGCGCGCACCCTGCGCACCCTGCCGACCCCATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | CTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTTGCCTaGTCCCCCGAAACCGGAGGCCCCATCAGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSRKSRRRRPLA*SPETGGPISSS Trigger: AGAGGAGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | GGTCACTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTaGCCTTGTCCCCCGAAACCGGAGGCCCCATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GHCPASPAGDGR*PCPPKPEAPSA Trigger: AGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAGTGACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | GGGCAGGATCATGCCCGCAGTAGACGCGCGCAGCCACTGGTCCAGTaGGAAGGTGCTGGCACCCAGCTTGATGGGGTCGGCAGGGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GQDHARSRRAQPLVQ*EGAGTQLDGVGRVR Trigger: GCGCACCCTGCCGACCCCATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTCTACTGCGGGCATGATCCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | CCTCATCAGGGTCACTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTaGCCTTGTCCCCCGAAACCGGAGGCCCCATCAGCTCCTCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PHQGHCPASPAGDGR*PCPPKPEAPSAPLP Trigger: CGGAAGAGGAGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAGTGACCCTGATGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | TCAGGGTCACTGTCCCGCAAGTCCCGCAGGCGACGGCCGCTTGCCTaGTCCCCCGAAACCGGAGGCCCCATCAGCTCCTCTTCCGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGSLSRKSRRRRPLA*SPETGGPISSSSVF Trigger: GAAGACGGAAGAGGAGCTGATGGGGCCTCCGGTTTCGGGGGACAAGGCAAGCGGCCGTCGCCTGCGGGACTTGCGGGACAGTGACCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | CATGCCCGCAGTAGACGCGCGCAGCCACTGGTCCAGTaGGAAGGTGCTGGCACCCAGCTTGATGGGGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HARSRRAQPLVQ*EGAGTQLDGVG Trigger: GCCGACCCCATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTCTACTGCGGGCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | AGGTTCGACTGCGCCTGGGAGCTGAAGTCCGGCATCTaGGGCAGGATCATGCCCGCAGTAGACGCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFDCAWELKSGI*GRIMPAVDARS Trigger: GCTGCGCGCGTCTACTGCGGGCATGATCCTGCCCAAGATGCCGGACTTCAGCTCCCAGGCGCAGTCGAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165512.4 |
||
| CDS GCA 72 bp | GTGCGAGGCCTTCGGCACTTCCCCAAGAGGTTCGACTaGGCCTCACAGCTGAAGTCCGGCATCTTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRGLRHFPKRFD*ASQLKSGILGR Trigger: CCTGCCCAAGATGCCGGACTTCAGCTGTGAGGCGCAGTCGAACCTCTTGGGGAAGTGCCGAAGGCCTCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001608.8 |
||
| CDS CCA 72 bp | GGCAGGATCATGCCCGCAGTAGACGCGCGCAGCCACTaGTCCAGTTGGAAGGTGCTGGCACCCAGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GRIMPAVDARSH*SSWKVLAPSLM Trigger: CATCAAGCTGGGTGCCAGCACCTTCCAACTGGACCAGTGGCTGCGCGCGTCTACTGCGGGCATGATCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | AGGTTCGACTGCGCCTCACAGCTGAAGTCCGGCATCTaGGGCAGGATCATGCCCGCAGTAGACGCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFDCASQLKSGI*GRIMPAVDARS Trigger: GCTGCGCGCGTCTACTGCGGGCATGATCCTGCCCAAGATGCCGGACTTCAGCTGTGAGGCGCAGTCGAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001608.8 |
||
| CDS CAA 72 bp | ACTGGGGCAGAGGTTGGTGTCCAGGCCCGCCTAGTCTaGGAGGAGGCGAGTCGTCCTCAGATGAGCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TGAEVGVQARLV*EEASRPQMSSR Trigger: CCGACTGCTCATCTGAGGACGACTCGCCTCCTCCAAGACTAGGCGGGCCTGGACACCAACCTCTGCCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | TTCCCCAAGAGGTTCGACTGCGCCTCACAGCTGAAGTCCGGCATCTaGGGCAGGATCATGCCCGCAGTAGACGCGCGCAGCCACTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPKRFDCASQLKSGI*GRIMPAVDARSHWS Trigger: GGACCAGTGGCTGCGCGCGTCTACTGCGGGCATGATCCTGCCCAAGATGCCGGACTTCAGCTGTGAGGCGCAGTCGAACCTCTTGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001608.8 |
||
| CDS CCA 72 bp | GAGTCGTCCTCAGATGAGCAGTCGGATGAGGCAGCATaGGCACCGGCACCATTGCTGTACGGGAAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESSSDEQSDEAA*APAPLLYGKLS Trigger: GGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGACTGCTCATCTGAGGACGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | CCCTTCTGCTTCTCCGCCTCCTGCGCAGCCTGCTCTTaGGCCTTTTTGCTGCGTTTCCATTTCATTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PFCFSASCAACS*AFLLRFHFIRR Trigger: CCGCCGAATGAAATGGAAACGCAGCAAAAAGGCCAAAGAGCAGGCTGCGCAGGAGGCGGAGAAGCAGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | TCGGATGAGGCAGCATGGGCACCGGCACCATTGCTGTACGGGAAGTaGTCCTCTTCTTCATCATCCTCGTCCTCATCAGGGTCACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDEAAWAPAPLLYGK*SSSSSSSSSSGSLS Trigger: GGACAGTGACCCTGATGAGGACGAGGATGATGAAGAAGAGGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CCA 72 bp | CCTTCTGCTTCTCCGCCTCCTGCGCAGCCTGCTCTTTaGCCTTTTTGCTGCGTTTCCATTTCATTCGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSASPPPAQPAL*PFCCVSISFGG Trigger: ACCGCCGAATGAAATGGAAACGCAGCAAAAAGGCCAAAGAGCAGGCTGCGCAGGAGGCGGAGAAGCAGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | GAGCAGTCGGATGAGGCAGCATGGGCACCGGCACCATaGCTGTACGGGAAGTTGTCCTCTTCTTCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: EQSDEAAWAPAP*LYGKLSSSSSS Trigger: GGATGATGAAGAAGAGGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGACTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | AGCGAGGTAGCCACCTCAAAACGCTTGGGTCGAGACAGGTACTTGTaGAGCTTGAACTGGTGTTCCAGCTCCAACAGCTGCTGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEVATSKRLGRDRYL*SLNWCSSSNSCWLV Trigger: CACCAGCCAGCAGCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGCTACCTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | TCCTCAGATGAGCAGTCGGATGAGGCAGCATGGGCACCGGCACCATaGCTGTACGGGAAGTTGTCCTCTTCTTCATCATCCTCGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSDEQSDEAAWAPAP*LYGKLSSSSSSSSS Trigger: TGAGGACGAGGATGATGAAGAAGAGGACAACTTCCCGTACAGCAATGGTGCCGGTGCCCATGCTGCCTCATCCGACTGCTCATCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 90 bp | ATGAGCGAGGTAGCCACCTCAAAACGCTTGGGTCGAGACAGGTACTaGTTGAGCTTGAACTGGTGTTCCAGCTCCAACAGCTGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MSEVATSKRLGRDRY*LSLNWCSSSNSCWL Trigger: CAGCCAGCAGCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGCTACCTCGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | GCCACCTCAAAACGCTTGGGTCGAGACAGGTACTTGTaGAGCTTGAACTGGTGTTCCAGCTCCAACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSKRLGRDRYL*SLNWCSSSNSC Trigger: GCAGCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | TCGGTGAGCATGAGCGAGGTAGCCACCTCAAAACGCTaGGGTCGAGACAGGTACTTGTTGAGCTTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSMSEVATSKR*GRDRYLLSLNW Trigger: CCAGTTCAAGCTCAACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGCTACCTCGCTCATGCTCACCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||
| CDS CAA 72 bp | GTAGCCACCTCAAAACGCTTGGGTCGAGACAGGTACTaGTTGAGCTTGAACTGGTGTTCCAGCTCCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VATSKRLGRDRY*LSLNWCSSSNS Trigger: GCTGTTGGAGCTGGAACACCAGTTCAAGCTCAACAAGTACCTGTCTCGACCCAAGCGTTTTGAGGTGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001608.8 ENSMUST00000165512.4 |
||