Pregenerated sensors for MNS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032221Ensembl transcript IDs: ENSMUST00000034746.10, ENSMUST00000183809.8, ENSMUST00000184604.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCAGGCCTGTGTGCTGTGCACGGCTGCTGCATCCAACAGCAGTaGTGCAGGCTGGGACCAGAGGCTGTTGTGCAGGGGCTATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AAGLCAVHGCCIQQQ*CRLGPEAVVQGLCV Trigger: CACACATAGCCCCTGCACAACAGCCTCTGGTCCCAGCCTGCATCACTGCTGTTGGATGCAGCAGCCGTGCACAGCACACAGGCCTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR GCA 90 bp | AACTCGCTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCTGAGTGCGCCACCACGCCCGGCTCGTAAAATA | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLLSAPPRPARKI Trigger: TATTTTACGAGCCGGGCGTGGTGGCGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGCGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR CCA 90 bp | TGTGTGCTGTGCACGGCTGCTGCATCCAACAGCAGTGATGCAGGCTaGGACCAGAGGCTGTTGTGCAGGGGCTATGTGTGTGTTCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: CVLCTAAASNSSDAG*DQRLLCRGYVCVLL Trigger: CAAGAGAACACACACATAGCCCCTGCACAACAGCCTCTGGTCCCAGCCTGCATCACTGCTGTTGGATGCAGCAGCCGTGCACAGCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 90 bp | ATAGACCAGGGCCTACTGTCACCAACTGTAAAACAGCAGTTACGCTaGCATCTAGTGGCAGCATCTGAGCACTCCAGGTCTCGCCCGGCC | + |
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Preference number: 1 (lower is better) Translates to: IDQGLLSPTVKQQLR*HLVAASEHSRSRPA Trigger: GGCCGGGCGAGACCTGGAGTGCTCAGATGCTGCCACTAGATGTCAGCGTAACTGCTGTTTTACAGTTGGTGACAGTAGGCCCTGGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 90 bp | TGCCAAGATGCTGTCTTTCAGCGAGGAGGAGTTTATGAAGGCTCTTaGGTGGGGCAGTTCATGAGTGAGCAACTGCAATGGGATGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: CQDAVFQRGGVYEGS*VGQFMSEQLQWDAH Trigger: ATGAGCATCCCATTGCAGTTGCTCACTCATGAACTGCCCCACTCAAGAGCCTTCATAAACTCCTCCTCGCTGAAAGACAGCATCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 90 bp | CAAAACTGTCAGCAAAGTAGGTTACAGAAGGAATGTGCTGTAACGTaGGTCATATGTGACAAACCCACAGCCAACACACTGAACAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QNCQQSRLQKECAVT*VICDKPTANTLNRE Trigger: TTCCCTGTTCAGTGTGTTGGCTGTGGGTTTGTCACATATGACTCACGTTACAGCACATTCCTTCTGTAACCTACTTTGCTGACAGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGACCAGAGGCTGTTGTGCAGGGGCTATGTGTGTGTTCTCTTGTTCAGTCCTGCCTCTGCCTCCTaGGTGCGCCACCACGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: GWDQRLLCRGYVCVLLFSPASAS*VRHHAR Trigger: CCGGGCGTGGTGGCGCACTCAGGAGGCAGAGGCAGG...ACTGAACAAGAGAACACACACATAGCCCCTGCACAACAGCCTCTGGTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR CAA 90 bp | GGAGCTGGTGTGATGGCACAGTGGTTACGGAGGGCATTGCTGCTATaGCAGAGGACCCAAATTCAGTTCCCAGCACCCACAGGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GAGVMAQWLRRALLL*QRTQIQFPAPTGLL Trigger: GAGCAGCCCTGTGGGTGCTGGGAACTGAATTTGGGTCCTCTGCAATAGCAGCAATGCCCTCCGTAACCACTGTGCCATCACACCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCCTCAAAGAAAAACACAGGACCTGACGGCTTCACTGCCAGCTTCTACCCCTCTGCCTCCTGAGTaGGCCACCACGCCCGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: KSPQRKTQDLTASLPASTPLPPE*ATTPGS Trigger: CGAGCCGGGCGTGGTGGCGCACTCAGGAGGCAGAGG...GGTAGAAGCTGGCAGTGAAGCCGTCAGGTCCTGTGTTTTTCTTTGAGGAGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | AAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTGCCAGGCCCACACAGTaGAACTCTGTTTCCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: KFSSQHPQGCSQPPLTPAARPTQ*NSVSTL Trigger: GAGGGTGGAAACAGAGTTTCACTGTGTGGGCCTGGC...AGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | AAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTACTCAGAAATCCGCCTaGCTCTGCCTCCTGAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: KFSSQHPQGCSQPPLTPATQKSA*LCLLSA Trigger: CGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGT...AGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR CAA 90 bp | GCTCTATTGGGAGCTGGTGTGATGGCACAGTGGTTACGGAGGGCATaGCTGCTATTGCAGAGGACCCAAATTCAGTTCCCAGCACCCACA | + |
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Preference number: 2 (lower is better) Translates to: ALLGAGVMAQWLRRA*LLLQRTQIQFPAPT Trigger: TGTGGGTGCTGGGAACTGAATTTGGGTCCTCTGCAATAGCAGCAATGCCCTCCGTAACCACTGTGCCATCACACCAGCTCCCAATAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTGTTTGGTTCCCACCGTaGGTATGGTCCCAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: TGLLTATFNSSSRGSRPFVWFPP*VWSQSS Trigger: AGATGACTGGGACCATACGCACGGTGGGAACCAAAC...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | GCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCAAAAGAGCACTAGTTaGTCTTGCAGAGAACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: APTGLLTATFNSSSRGSRQKSTS*SCREPR Trigger: CCTGGGTTCTCTGCAAGAGCAACTAGTGCTCTTTTG...CCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR CAA 90 bp | AACCTCCCCAAAAGAGCACTAGTTGCTCTTGCAGAGAACCCAGGTTaGGTTCCCACCGTGCGTATGGTCCCAGTCATCTGTAACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: NLPKRALVALAENPG*VPTVRMVPVICNSS Trigger: ACTGGAGTTACAGATGACTGGGACCATACGCACGGTGGGAACCAAACCTGGGTTCTCTGCAAGAGCAACTAGTGCTCTTTTGGGGAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGACCAGAGGCTGTTGTGCAGGGGCTATGTGTGTGTTCTCTTGTTCAGTGTCTTGAGGCATTCTTaGGCTCTGCAGACATCTAGT | + |
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Preference number: 2 (lower is better) Translates to: GWDQRLLCRGYVCVLLFSVLRHS*ALQTSS Trigger: ACTAGATGTCTGCAGAGCTCAAGAATGCCTCAAGAC...ACTGAACAAGAGAACACACACATAGCCCCTGCACAACAGCCTCTGGTCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTATAGTCCAGTATCTCTaGTCAACTCAGATGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TGLLTATFNSSSRGSRPFIVQYL*STQMQK Trigger: TTTCTGCATCTGAGTTGATCAGAGATACTGGACTAT...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTGTTACAGAAGGAATGTaGTGTAACGTGAGTCATATG | + |
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Preference number: 2 (lower is better) Translates to: TGLLTATFNSSSRGSRPFVTEGM*CNVSHM Trigger: CATATGACTCACGTTACAGCACATTCCTTCTGTAAC...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAAAATAGAGATGGAAACAGGGACACACTTACTGTACCAAAGGATCATAACTCAGATGCAGAAATaGTCCCCAGAACACCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GDKIEMETGTHLLYQRIITQMQK*SPEHQQ Trigger: TTGCTGGTGTTCTGGGGAGCATTTCTGCATCTGAGT...TATGATCCTTTGGTACAGTAAGTGTGTCCCTGTTTCCATCTCTATTTTGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTCAGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGGACCAGAGGCTGTTGTaGAGGGGCTATGTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISDTLQTDRSAKKFVFTLDQRLL*RGYVCV Trigger: AACACACACATAGCCCCTGCACAACAGCCTCTGGTC...CAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCTGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCAGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGTTTTCTGGCCTCCATTaGCCTCTGCACAAACGGGAT | + |
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Preference number: 2 (lower is better) Translates to: ISDTLQTDRSAKKFVFTLFSGLH*PLHKRD Trigger: ATCCCGTTTGTGCAGAGGTCAATGGAGGCCAGAAAA...CAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCTGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGTGTGACATGATATTGTaGTCTTCAGAGTTCATACTG | + |
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Preference number: 2 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQCDMIL*SSEFIL Trigger: CAGTATGAACTCTGAAGATCACAATATCATGTCACA...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGAAATTGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTAACAATAGACGTGAGCTGCTGTGTTTaGCCTCTGGTTCTGTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: QLKLIDILKRQKVSLTIDVSCCV*PLVLWN Trigger: ATTCCACAGAACCAGAGGCCAAACACAGCAGCTCAC...GTCTATTGTTAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CCA 90 bp | CAGATATGTTTGTATATATATTCCCTCCCAACTACAGAAAGTACCATTCATGAGTTCAAGGCCCTTTTCTaGCCTCCATTGACCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QICLYIYSLPTTESTIHEFKALF*PPLTSA Trigger: TGCAGAGGTCAATGGAGGCCAGAAAAGGGCCTTGAA...CTCATGAATGGTACTTTCTGTAGTTGGGAGGGAATATATATACAAACATATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CCA 90 bp | AGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGCTTATTGTTTGGGAGGATGTTaGAAGACAAAGCCAGACGGC | + |
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Preference number: 2 (lower is better) Translates to: RYTTDRPFCQKVCFYFAYCLGGC*KTKPDG Trigger: GCCGTCTGGCTTTGTCTTCCAACATCCTCCCAAACA...ATAAGCAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGAAATGCTCCCCAGAACACCAGCAAACAACTTCTATACATCAAAAGATGTAAGCATGTCACACTaGCAGAATGAAGAAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: DAEMLPRTPANNFYTSKDVSMSH*QNEEKV Trigger: AACCTTTTCTTCATTCTGTCAGTGTGACATGCTTAC...ATCTTTTGATGTATAGAAGTTGTTTGCTGGTGTTCTGGGGAGCATTTCTGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGGAAAAATATGAAGTCTaGGAACAAAGAAGTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQEKYEV*EQRSWV Trigger: AACCCAACTTCTTTGTTCCCAGACTTCATATTTTTC...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGAAATTGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTAACAATAGACTGGAATTCTGTGATATaGTGGCATCATAGAATGCAT | + |
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Preference number: 2 (lower is better) Translates to: QLKLIDILKRQKVSLTIDWNSVI*WHHRMH Trigger: ATGCATTCTATGATGCCATCATATCACAGAATTCCA...GTCTATTGTTAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGAAGGGAGATCAAGTAGATCAAATCCATAATAAAAAGCTCTATTGGGAGCTGATACCGAAATCATaGAAGAGCAACAAACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SKKGDQVDQIHNKKLYWELIPKS*KSNKQN Trigger: GTTTTGTTTGTTGCTCTTGCATGATTTCGGTATCAG...CTCCCAATAGAGCTTTTTATTATGGATTTGATCTACTTGATCTCCCTTCTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | CTGTGTGCTGTGCACGGCTGCTGCATCCAACAGCAGTaGTGCAGGCTGGGACCAGAGGCTGTTGTGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LCAVHGCCIQQQ*CRLGPEAVVQG Trigger: CCCCTGCACAACAGCCTCTGGTCCCAGCCTGCATCACTGCTGTTGGATGCAGCAGCCGTGCACAGCACACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CAA 90 bp | GCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGAGTGAGCTGCTGTGTTaGGCCTCTGGTTCTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: APTGLLTATFNSSSRGSRSELLC*ASGSVE Trigger: TTCCACAGAACCAGAGGCCAAACACAGCAGCTCACT...CCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CAA 90 bp | GCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCTTTTCTGGCCTCCATaGACCTCTGCACAAACGGGA | + |
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Preference number: 3 (lower is better) Translates to: APTGLLTATFNSSSRGSRLFWPP*TSAQTG Trigger: TCCCGTTTGTGCAGAGGTCAATGGAGGCCAGAAAAG...CCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | AGTTCGAGGTTAGCCTGGACAGCCAGGCCCACACAGTaGAACTCTGTTTCCACCCTCTCCAAAACCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSRLAWTARPTQ*NSVSTLSKTSP Trigger: TGGGGAGGTTTTGGAGAGGGTGGAAACAGAGTTTCACTGTGTGGGCCTGGCTGTCCAGGCTAACCTCGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR GCA 72 bp | AGAGGACCCAAATTCAGTTCCCAGCACCCACAGGGCTaGTCACAGCCACCTTTAACTCCAGCTCTAGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: RGPKFSSQHPQG*SQPPLTPALGV Trigger: AACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTTGGGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | GGCCTACTGTCACCAACTGTAAAACAGCAGTTACGCTaGCATCTAGTGGCAGCATCTGAGCACTCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GLLSPTVKQQLR*HLVAASEHSRS Trigger: AGACCTGGAGTGCTCAGATGCTGCCACTAGATGTCAGCGTAACTGCTGTTTTACAGTTGGTGACAGTAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGGCAGAGAACCCAGGTTaGGTTCCCACCGTGCGTATG | + |
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Preference number: 3 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQAENPG*VPTVRM Trigger: CATACGCACGGTGGGAACCAAACCTGGGTTCTCTGC...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | TCTGTAACTCCAGTTCCAGAGGCTAGGACACCGTCTTaGGGCATTCTTGAGCTCTGCAGACATCTAGTACAC | + |
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Preference number: 3 (lower is better) Translates to: SVTPVPEARTPS*GILELCRHLVH Trigger: GTGTACTAGATGTCTGCAGAGCTCAAGAATGCCTCAAGACGGTGTCCTAGCCTCTGGAACTGGAGTTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | CAGCAAAGTAGGTTACAGAAGGAATGTGCTGTAACGTaGGTCATATGTGACAAACCCACAGCCAACACACTG | + |
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Preference number: 3 (lower is better) Translates to: QQSRLQKECAVT*VICDKPTANTL Trigger: CAGTGTGTTGGCTGTGGGTTTGTCACATATGACTCACGTTACAGCACATTCCTTCTGTAACCTACTTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | CAAATCCATAATAAAAAGCTCTATTGGGAGCTGGTGTaGTGGCACAGTGGTTACGGAGGGCATTGCTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: QIHNKKLYWELV*WHSGYGGHCCY Trigger: ATAGCAGCAATGCCCTCCGTAACCACTGTGCCATCACACCAGCTCCCAATAGAGCTTTTTATTATGGATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR GCA 72 bp | CCACATTCAAGTATGCTCATCCTGATACCGAAATCATaGAAGAGCAACAAACAAAACCAAGCCAACAACTCC | + |
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Preference number: 3 (lower is better) Translates to: PHSSMLILIPKS*KSNKQNQANNS Trigger: GGAGTTGTTGGCTTGGTTTTGTTTGTTGCTCTTGCATGATTTCGGTATCAGGATGAGCATACTTGAATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CAA 90 bp | ATCTCAGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGGCACAAATGAAAGCCTaGAGCTGTAGCTCAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: ISDTLQTDRSAKKFVFTLAQMKA*SCSSVA Trigger: TGCCACTGAGCTACAGCTCAAGGCTTTCATTTGTGC...CAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCTGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | AGTAGAGAGAAAAGCCCAAGACTGAGCAACACTTCATaGCAAAACTGTCAGCAAAGTAGGTTACAGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SREKSPRLSNTS*QNCQQSRLQKE Trigger: TTCCTTCTGTAACCTACTTTGCTGACAGTTTTGTCATGAAGTGTTGCTCAGTCTTGGGCTTTTCTCTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | GCTGCTGTGTTTGGCCTCTGGTTCTGTGGAATTCTGTaGTATGATGGCATCATAGAATGCATAGTAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: AAVFGLWFCGIL*YDGIIECIVNK Trigger: TTTATTTACTATGCATTCTATGATGCCATCATATCACAGAATTCCACAGAACCAGAGGCCAAACACAGCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGAAATTGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTAACAATAGACTCTCTTGTTCAGTGGTaGTGCACACAGGAGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: QLKLIDILKRQKVSLTIDSLVQW*CTQETK Trigger: TTTTGTCTCCTGTGTGCACAACCACTGAACAAGAGA...GTCTATTGTTAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| 3UTR TCA 72 bp | AGGTTTGTAAATTCAGTAGAGAGAAAAGCCCAAGACTaGGCAACACTTCATGACAAAACTGTCAGCAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: RFVNSVERKAQD*ATLHDKTVSKV Trigger: TACTTTGCTGACAGTTTTGTCATGAAGTGTTGCTCAGTCTTGGGCTTTTCTCTCTACTGAATTTACAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | GCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCAGCAGCTGCTCGTATaGCTCCTGCTTCCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: APTGLLTATFNSSSRGSRQQLLV*LLLPPL Trigger: GAGAGGAGGAAGCAGGAGGCATACGAGCAGCTGCTG...CCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTTCCTGGTACAGCTCCTaGCGCACTTGCTCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFSWYSS*RTCSRS Trigger: TGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGA...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | GCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCAGTTTGATGATCTCTaGCTGCTCCTCCTGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: APTGLLTATFNSSSRGSRQFDDL*LLLLVQ Trigger: CTGTACCAGGAGGAGCAGGCAGAGATCATCAAACTG...CCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | GTGATGGCACAGTGGTTACGGAGGGCATTGCTGCTATaGCAGAGGACCCAAATTCAGTTCCCAGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VMAQWLRRALLL*QRTQIQFPAPT Trigger: TGTGGGTGCTGGGAACTGAATTTGGGTCCTCTGCAATAGCAGCAATGCCCTCCGTAACCACTGTGCCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | GGAGCTGGTGTGATGGCACAGTGGTTACGGAGGGCATaGCTGCTATTGCAGAGGACCCAAATTCAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGVMAQWLRRA*LLLQRTQIQFP Trigger: TGGGAACTGAATTTGGGTCCTCTGCAATAGCAGCAATGCCCTCCGTAACCACTGTGCCATCACACCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTCGTGCTCCTCCATCATaGTCCTTTCTATCTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFRAPPS*SFLSPH Trigger: ATGCGGAGATAGAAAGGATCATGATGGAGGAGCACG...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTCTCTTCCTCCTCTTTTaGAGCCTGCAGTATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFLFLLF*SLQYEF Trigger: GAACTCATACTGCAGGCTGCAAAAGAGGAGGAAGAG...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACGCACCACTTGGTTCTTaGCTTGCCTCTCTAACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTQIQFPAPTGLLTATFNAPLGS*LASLTY Trigger: ATAAGTTAGAGAGGCAAGCCAAGAACCAAGTGGTGC...GTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTTGGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | AAAAGAGCACTAGTTGCTCTTGCAGAGAACCCAGGTTaGGTTCCCACCGTGCGTATGGTCCCAGTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRALVALAENPG*VPTVRMVPVIC Trigger: ACAGATGACTGGGACCATACGCACGGTGGGAACCAAACCTGGGTTCTCTGCAAGAGCAACTAGTGCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | GAAGATTTCTGTGAGTTCGAGGTTAGCCTGGACAGCCAGGCCCACACAGTGAAAGTTTCTGGGCATTCATaGGCTCAATGCGGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EDFCEFEVSLDSQAHTVKVSGHS*AQCGHL Trigger: AAGATGACCGCATTGAGCTCATGAATGCCCAGAAAC...TTTCACTGTGTGGGCCTGGCTGTCCAGGCTAACCTCGAACTCACAGAAATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTTTCATTCGCTGTTTCTaGGCATTCATGAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFFIRCF*AFMSSM Trigger: CATTGAGCTCATGAATGCCCAGAAACAGCGAATGAA...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | AGAGGTCTGTCGTCTCCCTGTAGTGAGCTGCTGTGTTaGGCCTCTGGTTCTGTGGAATTCTGTGATATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RGLSSPCSELLC*ASGSVEFCDMM Trigger: CATCATATCACAGAATTCCACAGAACCAGAGGCCAAACACAGCAGCTCACTACAGGGAGACGACAGACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | GCACACATCAGGAGACTGACAGCACAAATGAAAGCCTaGAGCTGTAGCTCAGTGGCAGAGCACTTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHIRRLTAQMKA*SCSSVAEHLQN Trigger: GTTCTGTAAGTGCTCTGCCACTGAGCTACAGCTCAAGGCTTTCATTTGTGCTGTCAGTCTCCTGATGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTCATCTTGTTTGCTTCTaGTTTTTGGATGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFHLVCF*FLDGFF Trigger: GAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATG...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | CAGAGGCTGTTGTGCAGGGGCTATGTGTGTGTTCTCTaGTTCAGTGGTTGTGCACACAGGAGACAAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRLLCRGYVCVL*FSGCAHRRQNR Trigger: TCTATTTTGTCTCCTGTGTGCACAACCACTGAACAAGAGAACACACACATAGCCCCTGCACAACAGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTTCATCTACTAACTTCTaGTGCTTTTCACTAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLTATFNSSSRGSRPFSSTNF*CFSLKL Trigger: GAGCTTTAGTGAAAAGCATCAGAAGTTAGTAGATGA...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | AAATCTCCTCAAAGAAAAACACAGGACCTGACGGCTTCACTGCCAGCTTCTACCTTGCAGCCTGCAGTATaGGTTCCTTCAGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSPQRKTQDLTASLPASTLQPAV*VPSVPF Trigger: AAATGGCACTGAAGGAACTCATACTGCAGGCTGCAA...GGTAGAAGCTGGCAGTGAAGCCGTCAGGTCCTGTGTTTTTCTTTGAGGAGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | GAAGATTTCTGTGAGTTCGAGGTTAGCCTGGACAGCCAGGCCCACACAGTGAAATTCTCTCTCACTTGCTaGCTCATCTTCTTATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDFCEFEVSLDSQAHTVKFSLTC*LIFLSF Trigger: GAAGGATAAGAAGATGAGGCAGCAAGTGAGAGAGAA...TTTCACTGTGTGGGCCTGGCTGTCCAGGCTAACCTCGAACTCACAGAAATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | AGGACCCAAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACTTGCTCCTGTATGTTTaGAAACTCTATGATTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTQIQFPAPTGLLTATFNLLLYV*KLYDFP Trigger: CGGAAAATCATAGAGTTTGCAAACATACAGGAGCAA...GTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTTGGGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | AAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTTATGAGTTCCTTCAGTaGCATTTGGTCTTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFSSQHPQGCSQPPLTPAYEFLQ*HLVFKV Trigger: GACTTTGAAGACCAAATGGCACTGAAGGAACTCATA...AGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | GGAGACAAAATAGAGATGGAAACAGGGACACACTTACTGTACCAAAGGATCATACATTCTGCAGCACTCTaGGGAACCTCTGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDKIEMETGTHLLYQRIIHSAAL*GTSGVP Trigger: TGGAACGCCAGAGGTTCCTCAGAGTGCTGCAGAATG...TATGATCCTTTGGTACAGTAAGTGTGTCCCTGTTTCCATCTCTATTTTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | ATAAAAAGCTCTATTGGGAGCTGGTGTGATGGCACAGTGGTTACGGAGGGCATTTCGTCGTTTTCATTTTaGACCACTTGGTTCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSSIGSWCDGTVVTEGISSFSF*TTWFLA Trigger: AGCCAAGAACCAAGTGGTGCAAAATGAAAACGACGA...AATGCCCTCCGTAACCACTGTGCCATCACACCAGCTCCCAATAGAGCTTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGTGGTCTTCAAAGTCTTaGTTCATCTCCCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQWSSKS*FISLCL Trigger: GAGGCAGAGGGAGATGAAGCAAGACTTTGAAGACCA...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | AAATCTCCTCAAAGAAAAACACAGGACCTGACGGCTTCACTGCCAGCTTCTACCTGTTTGCAAACTCTATaGTTTTCCGGTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPQRKTQDLTASLPASTCLQTL*FSGSLP Trigger: AGGAAGAGAACCGGAAAATCATAGAGTTTGCAAACA...GGTAGAAGCTGGCAGTGAAGCCGTCAGGTCCTGTGTTTTTCTTTGAGGAGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGACTCTGAGGAACCTCTaGCGTTCCACCTTCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISDTLQTDRSAKKFVFTLTLRNL*RSTFSS Trigger: CGACGAGAAGGTGGAACGCCAGAGGTTCCTCAGAGT...CAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCTGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | TACTACCAAGAATTAACTAAGATAGAAAAACCTGGACACACCCATAGTAAGAAGCAGCCCTGCCGCCTTTaGTGTAGTTGCAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YYQELTKIEKPGHTHSKKQPCRL*CSCNSS Trigger: GGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTG...CTTCTTACTATGGGTGTGTCCAGGTTTTTCTATCTTAGTTAATTCTTGGTAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR CCA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGTCCTTCAGTGCCATTTaGTCTTCAAAGTCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQSFSAI*SSKSCF Trigger: GAAGCAAGACTTTGAAGACCAAATGGCACTGAAGGA...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | AGTAAGAAGGGAGATCAAGTAGATCAAATCCATAATAAAAAGCTCTATTGGGAGGCAAGTCTCTCTTCCTaGTCAAGCTGTCGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKKGDQVDQIHNKKLYWEASLSS*SSCRSL Trigger: GAGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGC...CTCCCAATAGAGCTTTTTATTATGGATTTGATCTACTTGATCTCCCTTCTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR GCA 90 bp | GATGCAGAAATGCTCCCCAGAACACCAGCAAACAACTTCTATACATCAAAAGATTCCTCTTTTGCAGCCTaGAGTATGAGTTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DAEMLPRTPANNFYTSKDSSFAA*SMSSFS Trigger: ACTGAAGGAACTCATACTGCAGGCTGCAAAAGAGGA...ATCTTTTGATGTATAGAAGTTGTTTGCTGGTGTTCTGGGGAGCATTTCTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR CCA 90 bp | AGTTACAAGGTAAGAAAACCAATAGGCACACATCAGGAGACTGACAGCACAAATCTTCTGCTTTTTGGATaGCTTCTTCCATGTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYKVRKPIGTHQETDSTNLLLFG*LLPCRA Trigger: AGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAG...ATTTGTGCTGTCAGTCTCCTGATGTGTGCCTATTGGTTTTCTTACCTTGTAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | CAGTTCATGAGTGAGCAACTGCAATGGGATGCTCATTaGATATCAAGTGTAGTCTTCTTGCTGTTCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QFMSEQLQWDAH*ISSVVFLLFMS Trigger: ACTCATGAACAGCAAGAAGACTACACTTGATATCAAATGAGCATCCCATTGCAGTTGCTCACTCATGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR CCA 90 bp | AGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGCTTATTCCTTCTCCACGATCTaGGCTGCTCTCTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYTTDRPFCQKVCFYFAYSFSTI*AALSLF Trigger: GAACAAAGAGAGAGCAGCCCAGATCGTGGAGAAGGA...ATAAGCAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | AGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGCTTATTTGCAGCATGTTCTTTaGGGAGTCTCAGCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYTTDRPFCQKVCFYFAYLQHVL*GVSASL Trigger: AAGAGAGGCTGAGACTCCTCAAAGAACATGCTGCAA...ATAAGCAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | CAGTTGAAATTGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTAACAATAGACCGCTCGCCTTCTCTTTaGTCCTGTATGTTTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLKLIDILKRQKVSLTIDRSPSL*SCMFAN Trigger: GTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCG...GTCTATTGTTAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR CCA 90 bp | ATCTCAGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGTTTGCTTCTGCTTTTTaGATGGCTTCTTCCATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ISDTLQTDRSAKKFVFTLFASAF*MASSMS Trigger: CGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAA...CAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCTGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS-3UTR CCA 90 bp | GGAGACAAAATAGAGATGGAAACAGGGACACACTTACTGTACCAAAGGATCATAAAGTCTTGTGCCCTCTaGAATTCTTCAATATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDKIEMETGTHLLYQRIIKSCAL*NSSIYF Trigger: GAAGTATATTGAAGAATTCCAGAGGGCACAAGACTT...TATGATCCTTTGGTACAGTAAGTGTGTCCCTGTTTCCATCTCTATTTTGTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR TCA 90 bp | AGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGCTTATCAATTTCGTCTATCATaGGTTTCTCCTTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYTTDRPFCQKVCFYFAYQFRLS*VSPSAA Trigger: AGCTGCTGAAGGAGAAACTCATGATAGACGAAATTG...ATAAGCAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR GCA 90 bp | AGTAAGAAGGGAGATCAAGTAGATCAAATCCATAATAAAAAGCTCTATTGGGAGACTTGGTTCTTGGCTTaGCTCTCTAACTTATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SKKGDQVDQIHNKKLYWETWFLA*LSNLFM Trigger: CATGAATAAGTTAGAGAGGCAAGCCAAGAACCAAGT...CTCCCAATAGAGCTTTTTATTATGGATTTGATCTACTTGATCTCCCTTCTTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| 3UTR CAA 72 bp | GGAGAATTAATGATAGGGTTCAAGAAGCAGTTGAAATaGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GELMIGFKKQLK*IDILKRQKVSL Trigger: TAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTGCTTCTTGAACCCTATCATTAATTCTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | TTGATGATCTCTGCCTGCTCCTCCTGGTACAGCTCCTGCCGCACTTaGTCCAGGTCATCCCGCTGCCGCAGTGTTTCCTCCAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LMISACSSWYSSCRT*SRSSRCRSVSSSCF Trigger: GAAGCAGCTGGAGGAAACACTGCGGCAGCGGGATGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGAGGAGCAGGCAGAGATCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | ACTTTCAGTTTGATGATCTCTGCCTGCTCCTCCTGGTACAGCTCCTaGCGCACTTGCTCCAGGTCATCCCGCTGCCGCAGTGTTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFSLMISACSSWYSS*RTCSRSSRCRSVSS Trigger: GGAGGAAACACTGCGGCAGCGGGATGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGAGGAGCAGGCAGAGATCATCAAACTGAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | CCTCTCTTGATCTTCCAGCTGCTTCTCCAGGTCCAGGTAGTACTGTaGCCTCTCCTTGTTCCGCCGCTCTTGCTTGGCGCTCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLLIFQLLLQVQVVL*PLLVPPLLLGALFL Trigger: AAGGAAGAGAGCGCCAAGCAAGAGCGGCGGAACAAGGAGAGGGCACAGTACTACCTGGACCTGGAGAAGCAGCTGGAAGATCAAGAGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS CCA 90 bp | GCTTCTTCTTTCACTTTCAGTTTGATGATCTCTGCCTGCTCCTCCTaGTACAGCTCCTGCCGCACTTGCTCCAGGTCATCCCGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSFTFSLMISACSS*YSSCRTCSRSSRCR Trigger: GCGGCAGCGGGATGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGAGGAGCAGGCAGAGATCATCAAACTGAAAGTGAAAGAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS TCA 90 bp | GCTCACGTTGTTTGTCTGCGAGGAACTGGCTCCGGCGTTCTTCAATaGGTTTCTCCACGGCGCGTTTGTGCTCCAGCTGCTTCATTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHVVCLRGTGSGVLQ*VSPRRVCAPAASFA Trigger: AGCGAATGAAGCAGCTGGAGCACAAACGCGCCGTGGAGAAACTCATTGAAGAACGCCGGAGCCAGTTCCTCGCAGACAAACAACGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | TTCATCTCCCTCTGCCTCCTCAGTCTCAGCTCTGCTTCTTCCATCTaGTCATACTTCATGGCGTCCTTCTCCACGATCTGGGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FISLCLLSLSSASSI*SYFMASFSTIWAAL Trigger: GAGAGCAGCCCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGGAAGAAGCAGAGCTGAGACTGAGGAGGCAGAGGGAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184604.8 |
||
| CDS CCA 90 bp | TTCTCCACGGCGCGTTTGTGCTCCAGCTGCTTCATTCGCTGTTTCTaGGCATTCATGAGCTCAATGCGGTCATCTTCGGCAAACTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSTARLCSSCFIRCF*AFMSSMRSSSANLA Trigger: GGCCAAGTTTGCCGAAGATGACCGCATTGAGCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGCACAAACGCGCCGTGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS TCA 90 bp | CGCGTTTGTGCTCCAGCTGCTTCATTCGCTGTTTCTGGGCATTCATaGGCTCAATGCGGTCATCTTCGGCAAACTTGGCCAGCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVCAPAASFAVSGHS*AQCGHLRQTWPAWL Trigger: AAGCCATGCTGGCCAAGTTTGCCGAAGATGACCGCATTGAGCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGCACAAACGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | TTCCGCCGCTCTTGCTTGGCGCTCTCTTCCTTCAGCAGCCTATCGTaGTCCTCCATCATGATCCTTTCTATCTCCGCATCACGTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FRRSCLALSSFSSLS*SSIMILSISASRFI Trigger: GATGAAACGTGATGCGGAGATAGAAAGGATCATGATGGAGGAGCACGATAGGCTGCTGAAGGAAGAGAGCGCCAAGCAAGAGCGGCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS GCA 90 bp | AACTGGCTCCGGCGTTCTTCAATGAGTTTCTCCACGGCGCGTTTGTaGTCCAGCTGCTTCATTCGCTGTTTCTGGGCATTCATGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NWLRRSSMSFSTARL*SSCFIRCFWAFMSS Trigger: TGAGCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGCACAAACGCGCCGTGGAGAAACTCATTGAAGAACGCCGGAGCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CCA 90 bp | GCCTCCTCAGTCTCAGCTCTGCTTCTTCCATCTGCTCATACTTCATaGCGTCCTTCTCCACGATCTGGGCTGCTCTCTCTTTGTTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSVSALLLPSAHTS*RPSPRSGLLSLCSC Trigger: ACATGAACAAAGAGAGAGCAGCCCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGGAAGAAGCAGAGCTGAGACTGAGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184604.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTCTAGGGGTTCAAGGCCCTTTTTCATTTTGCACCACTaGGTTCTTGGCTTGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLTATFNSSSRGSRPFFILHH*VLGLPL Trigger: GAGAGGCAAGCCAAGAACCAAGTGGTGCAAAATGAA...AAAGGGCCTTGAACCCCTAGAGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | TGCTCCTCCATCATGATCCTTTCTATCTCCGCATCACGTTTCATCTaGTCATACTTCATGGCGTCCTTCTCCACGATCTGGGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSIMILSISASRFI*SYFMASFSTIWAAL Trigger: GAGAGCAGCCCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGAAACGTGATGCGGAGATAGAAAGGATCATGATGGAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS CCA 90 bp | GCAAATTCTGACGCTGGACCCTCTTTTCCTCGATCTCGTGAACTCTaGCCATCCGCTCGCCTTCTCTTTGCTCCTGTATGTTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ANSDAGPSFPRSREL*PSARLLFAPVCLQT Trigger: AGTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGGATGGCCAGAGTTCACGAGATCGAGGAAAAGAGGGTCCAGCGTCAGAATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS TCA 90 bp | GCTTGGCGCTCTCTTCCTTCAGCAGCCTATCGTGCTCCTCCATCATaGTCCTTTCTATCTCCGCATCACGTTTCATCTGCTCATACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWRSLPSAAYRAPPS*SFLSPHHVSSAHTS Trigger: TGAAGTATGAGCAGATGAAACGTGATGCGGAGATAGAAAGGATCATGATGGAGGAGCACGATAGGCTGCTGAAGGAAGAGAGCGCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS GCA 90 bp | CTCTCGTGCTTCAGTCTGGCCAGTTCGTTTGCAAGTCTCTCTTCCTaGTCAAGCTGTCGATCCCTCAGCATCTTGTTTGCTTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCFSLASSFASLSS*SSCRSLSILFASAF Trigger: AAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAAGCACGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS GCA 90 bp | GTGAACTCTGGCCATCCGCTCGCCTTCTCTTTGCTCCTGTATGTTTaGAAACTCTATGATTTTCCGGTTCTCTTCCTCCATCTCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: VNSGHPLAFSLLLYV*KLYDFPVLFLHLLT Trigger: CGTGAGGAGATGGAGGAAGAGAACCGGAAAATCATAGAGTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGGATGGCCAGAGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | TCTTCAATAATCTCATTGATGCAGCCCTGCCGCCTTTGCTGTAGTTaGAATTCCTCCAGCTCACGTTGTTTGTCTGCGAGGAACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSIISLMQPCRLCCS*NSSSSRCLSARNWL Trigger: GAGCCAGTTCCTCGCAGACAAACAACGTGAGCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | AGCCTCTCTTCTTCAATAATCTCATTGATGCAGCCCTGCCGCCTTTaGTGTAGTTGCAATTCCTCCAGCTCACGTTGTTTGTCTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSIISLMQPCRL*CSCNSSSSRCLSAR Trigger: CCTCGCAGACAAACAACGTGAGCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGAAGAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CCA 90 bp | CTTGCTGCCTCATCTTCTTATCCTTCAGACTCTCGTGCTTCAGTCTaGCCAGTTCGTTTGCAAGTCTCTCTTCCTGCTCAAGCTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAASSSYPSDSRASV*PVRLQVSLPAQAVD Trigger: ATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAAGCACGAGAGTCTGAAGGATAAGAAGATGAGGCAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCAGTTCCCAGCACCCACAGGGCTGCTCACAGCCACCTTTAACTCCAGCTTCTTTCACTTTCAGTTaGATGATCTCTGCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KFSSQHPQGCSQPPLTPASFTFS*MISACS Trigger: GGAGCAGGCAGAGATCATCAAACTGAAAGTGAAAGA...AGCTGGAGTTAAAGGTGGCTGTGAGCAGCCCTGTGGGTGCTGGGAACTGAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | GAAGATTTCTGTGAGTTCGAGGTTAGCCTGGACAGCCAGGCCCACACAGTGAAATCTTCAATAATCTCATaGATGCAGCCCTGCCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDFCEFEVSLDSQAHTVKSSIIS*MQPCRL Trigger: AAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGA...TTTCACTGTGTGGGCCTGGCTGTCCAGGCTAACCTCGAACTCACAGAAATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | AGGAGTCTCAGCCTCTCTTCTTCAATAATCTCATTGATGCAGCCCTaGCGCCTTTGCTGTAGTTGCAATTCCTCCAGCTCACGTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLSLSSSIISLMQP*RLCCSCNSSSSRCL Trigger: CAAACAACGTGAGCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGAAGAGAGGCTGAGACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CCA 90 bp | CAAGCTGTCGATCCCTCAGCATCTTGTTTGCTTCTGCTTTTTGGATaGCTTCTTCCATGTCGAGCTCAAACTGCTCATTCTGCAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: QAVDPSASCLLLLFG*LLPCRAQTAHSAAL Trigger: GAGTGCTGCAGAATGAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS TCA 90 bp | CCATCCGCTCGCCTTCTCTTTGCTCCTGTATGTTTGCAAACTCTATaGTTTTCCGGTTCTCTTCCTCCATCTCCTCACGCTTCTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSARLLFAPVCLQTL*FSGSLPPSPHASFV Trigger: GACAAAAGAAGCGTGAGGAGATGGAGGAAGAGAACCGGAAAATCATAGAGTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 90 bp | CTCTTCCTGCTCAAGCTGTCGATCCCTCAGCATCTTGTTTGCTTCTaGTTTTTGGATGGCTTCTTCCATGTCGAGCTCAAACTGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LFLLKLSIPQHLVCF*FLDGFFHVELKLLI Trigger: AATGAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAAGGTGAGTCTAACAATAGACGCTGTATCTCAGATACACTACAGACAGCGATCCCTCAGCATCTaGTTTGCTTCTGCTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQKVSLTIDAVSQIHYRQRSLSI*FASAFW Trigger: CCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCG...CTGTCTGTAGTGTATCTGAGATACAGCGTCTATTGTTAGACTCACCTTCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | GATGCAGAAATGCTCCCCAGAACACCAGCAAACAACTTCTATACATCAAAAGATCTCCTCACGCTTCTTTaGTCTCCAGAAGTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAEMLPRTPANNFYTSKDLLTLL*SPEVLC Trigger: GCACAAGACTTCTGGAGACAAAAGAAGCGTGAGGAG...ATCTTTTGATGTATAGAAGTTGTTTGCTGGTGTTCTGGGGAGCATTTCTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | GGAGACAAAATAGAGATGGAAACAGGGACACACTTACTGTACCAAAGGATCATACCGCTCGCCTTCTCTTaGCTCCTGTATGTTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDKIEMETGTHLLYQRIIPLAFS*LLYVCK Trigger: TTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGG...TATGATCCTTTGGTACAGTAAGTGTGTCCCTGTTTCCATCTCTATTTTGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | CAGTTGAAATTGATTGACATTTTGAAAAGGCAGAAGGTGAGTCTAACAATAGACCTGCTTCCTCCTCTCTaGATCTTCCAGCTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLKLIDILKRQKVSLTIDLLPPL*IFQLLL Trigger: GAGAAGCAGCTGGAAGATCAAGAGAGGAGGAAGCAG...GTCTATTGTTAGACTCACCTTCTGCCTTTTCAAAATGTCAATCAATTTCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | CAGATATGTTTGTATATATATTCCCTCCCAACTACAGAAAGTACCATTCATGAGCCCTCAGCATCTTGTTaGCTTCTGCTTTTTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QICLYIYSLPTTESTIHEPSASC*LLLFGW Trigger: CCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGG...CTCATGAATGGTACTTTCTGTAGTTGGGAGGGAATATATATACAAACATATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | AGATACACTACAGACAGACCGTTCTGCCAAAAAGTTTGTTTTTACTTTGCTTATTCATCTTCGGCAAACTaGGCCAGCATGGCTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RYTTDRPFCQKVCFYFAYSSSAN*ASMAFL Trigger: TAAGAAAGCCATGCTGGCCAAGTTTGCCGAAGATGA...ATAAGCAAAGTAAAAACAAACTTTTTGGCAGAACGGTCTGTCTGTAGTGTATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS-3UTR CAA 90 bp | AGTAAGAAGGGAGATCAAGTAGATCAAATCCATAATAAAAAGCTCTATTGGGAGTTCCTTCAGTGCCATTaGGTCTTCAAAGTCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKKGDQVDQIHNKKLYWEFLQCH*VFKVLL Trigger: AAGCAAGACTTTGAAGACCAAATGGCACTGAAGGAA...CTCCCAATAGAGCTTTTTATTATGGATTTGATCTACTTGATCTCCCTTCTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 72 bp | TTGATGATCTCTGCCTGCTCCTCCTGGTACAGCTCCTaGCGCACTTGCTCCAGGTCATCCCGCTGCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LMISACSSWYSS*RTCSRSSRCRS Trigger: ACTGCGGCAGCGGGATGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGAGGAGCAGGCAGAGATCATCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CAA 90 bp | TTTGATGATCTCTGCCTGCTCCTCCTGGTACAGCTCCTGCCGCACTaGCTCCAGGTCATCCCGCTGCCGCAGTGTTTCCTCCAGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FDDLCLLLLVQLLPH*LQVIPLPQCFLQLL Trigger: AAGCAGCTGGAGGAAACACTGCGGCAGCGGGATGACCTGGAGCAAGTGCGGCAGGAGCTGTACCAGGAGGAGCAGGCAGAGATCATCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 72 bp | ATCTTCCAGCTGCTTCTCCAGGTCCAGGTAGTACTGTaGCCTCTCCTTGTTCCGCCGCTCTTGCTTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: IFQLLLQVQVVL*PLLVPPLLLGA Trigger: AGCGCCAAGCAAGAGCGGCGGAACAAGGAGAGGGCACAGTACTACCTGGACCTGGAGAAGCAGCTGGAAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS CAA 72 bp | CAGGTAGTACTGTGCCCTCTCCTTGTTCCGCCGCTCTaGCTTGGCGCTCTCTTCCTTCAGCAGCCTATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVVLCPLLVPPL*LGALFLQQPIV Trigger: CACGATAGGCTGCTGAAGGAAGAGAGCGCCAAGCAAGAGCGGCGGAACAAGGAGAGGGCACAGTACTACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS CCA 72 bp | GACGCTGGACCCTCTTTTCCTCGATCTCGTGAACTCTaGCCATCCGCTCGCCTTCTCTTTGCTCCTGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: DAGPSFPRSREL*PSARLLFAPVC Trigger: ACATACAGGAGCAAAGAGAAGGCGAGCGGATGGCCAGAGTTCACGAGATCGAGGAAAAGAGGGTCCAGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CAA 90 bp | AGGAACTGGCTCCGGCGTTCTTCAATGAGTTTCTCCACGGCGCGTTaGTGCTCCAGCTGCTTCATTCGCTGTTTCTGGGCATTCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNWLRRSSMSFSTAR*CSSCFIRCFWAFMS Trigger: GCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGCACAAACGCGCCGTGGAGAAACTCATTGAAGAACGCCGGAGCCAGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CAA 90 bp | CCCTGCCGCCTTTGCTGTAGTTGCAATTCCTCCAGCTCACGTTGTTaGTCTGCGAGGAACTGGCTCCGGCGTTCTTCAATGAGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PCRLCCSCNSSSSRC*SARNWLRRSSMSFS Trigger: GGAGAAACTCATTGAAGAACGCCGGAGCCAGTTCCTCGCAGACAAACAACGTGAGCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 72 bp | CTCTGCCTCCTCAGTCTCAGCTCTGCTTCTTCCATCTaGTCATACTTCATGGCGTCCTTCTCCACGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLLSLSSASSI*SYFMASFSTIW Trigger: CCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGGAAGAAGCAGAGCTGAGACTGAGGAGGCAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184604.8 |
||
| CDS CCA 72 bp | GCGCGTTTGTGCTCCAGCTGCTTCATTCGCTGTTTCTaGGCATTCATGAGCTCAATGCGGTCATCTTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARLCSSCFIRCF*AFMSSMRSSSA Trigger: TGCCGAAGATGACCGCATTGAGCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGCACAAACGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS CAA 72 bp | CCTTCAGACTCTCGTGCTTCAGTCTGGCCAGTTCGTTaGCAAGTCTCTCTTCCTGCTCAAGCTGTCGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSDSRASVWPVR*QVSLPAQAVDP Trigger: GGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAAGCACGAGAGTCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS TCA 72 bp | CCATGTCGAGCTCAAACTGCTCATTCTGCAGCACTCTaGGGAACCTCTGGCGTTCCACCTTCTCGTCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PCRAQTAHSAAL*GTSGVPPSRRF Trigger: AAAACGACGAGAAGGTGGAACGCCAGAGGTTCCTCAGAGTGCTGCAGAATGAGCAGTTTGAGCTCGACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS TCA 72 bp | GCTCCAGCTGCTTCATTCGCTGTTTCTGGGCATTCATaGGCTCAATGCGGTCATCTTCGGCAAACTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: APAASFAVSGHS*AQCGHLRQTWP Trigger: TGGCCAAGTTTGCCGAAGATGACCGCATTGAGCTCATGAATGCCCAGAAACAGCGAATGAAGCAGCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 72 bp | CTTCAGACTCTCGTGCTTCAGTCTGGCCAGTTCGTTTaGAAGTCTCTCTTCCTGCTCAAGCTGTCGATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQTLVLQSGQFV*KSLFLLKLSIP Trigger: AGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAAGCACGAGAGTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS CCA 72 bp | GTCTCAGCTCTGCTTCTTCCATCTGCTCATACTTCATaGCGTCCTTCTCCACGATCTGGGCTGCTCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSALLLPSAHTS*RPSPRSGLLSL Trigger: AAGAGAGAGCAGCCCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGGAAGAAGCAGAGCTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184604.8 |
||
| CDS GCA 72 bp | GCTTTTTGGATGGCTTCTTCCATGTCGAGCTCAAACTaGTCATTCTGCAGCACTCTGAGGAACCTCTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: AFWMASSMSSSN*SFCSTLRNLWR Trigger: ACGCCAGAGGTTCCTCAGAGTGCTGCAGAATGAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS CCA 72 bp | CTATCTCCGCATCACGTTTCATCTGCTCATACTTCATaGCGTCCTTCTCCACGATCTGGGCTGCTCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSPHHVSSAHTS*RPSPRSGLLSL Trigger: AAGAGAGAGCAGCCCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGAAACGTGATGCGGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS CAA 90 bp | TCTTCTTATCCTTCAGACTCTCGTGCTTCAGTCTGGCCAGTTCGTTaGCAAGTCTCTCTTCCTGCTCAAGCTGTCGATCCCTCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSYPSDSRASVWPVR*QVSLPAQAVDPSAS Trigger: AGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAAGCACGAGAGTCTGAAGGATAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS GCA 72 bp | TTCAGTCTGGCCAGTTCGTTTGCAAGTCTCTCTTCCTaGTCAAGCTGTCGATCCCTCAGCATCTTGTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSLASSFASLSS*SSCRSLSILFA Trigger: AGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAACGAACTGGCCAGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS CAA 90 bp | CTGCTCAAGCTGTCGATCCCTCAGCATCTTGTTTGCTTCTGCTTTTaGGATGGCTTCTTCCATGTCGAGCTCAAACTGCTCATTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLKLSIPQHLVCFCF*DGFFHVELKLLILQ Trigger: CTGCAGAATGAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
||
| CDS CAA 90 bp | GCATGTTCTTTGAGGAGTCTCAGCCTCTCTTCTTCAATAATCTCATaGATGCAGCCCTGCCGCCTTTGCTGTAGTTGCAATTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSLRSLSLSSSIIS*MQPCRLCCSCNSSS Trigger: GCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGAAGAGAGGCTGAGACTCCTCAAAGAACATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS TCA 72 bp | TCTCTTCCTTCAGCAGCCTATCGTGCTCCTCCATCATaGTCCTTTCTATCTCCGCATCACGTTTCATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPSAAYRAPPS*SFLSPHHVSSA Trigger: AGCAGATGAAACGTGATGCGGAGATAGAAAGGATCATGATGGAGGAGCACGATAGGCTGCTGAAGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
||
| CDS GCA 72 bp | GGCCATCCGCTCGCCTTCTCTTTGCTCCTGTATGTTTaGAAACTCTATGATTTTCCGGTTCTCTTCCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHPLAFSLLLYV*KLYDFPVLFLH Trigger: ATGGAGGAAGAGAACCGGAAAATCATAGAGTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGGATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
||
| CDS GCA 72 bp | AGCCTCTCTTCTTCAATAATCTCATTGATGCAGCCCTaGCGCCTTTGCTGTAGTTGCAATTCCTCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSSSIISLMQP*RLCCSCNSSSS Trigger: TGAGCTGGAGGAATTGCAACTACAGCAAAGGCGGCAGGGCTGCATCAATGAGATTATTGAAGAAGAGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS CAA 72 bp | CTGTCGATCCCTCAGCATCTTGTTTGCTTCTGCTTTTaGGATGGCTTCTTCCATGTCGAGCTCAAACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSIPQHLVCFCF*DGFFHVELKLL Trigger: GAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS CAA 72 bp | CTTCCTGCTCAAGCTGTCGATCCCTCAGCATCTTGTTaGCTTCTGCTTTTTGGATGGCTTCTTCCATGTCGA | + |
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Preference number: 6 (lower is better) Translates to: LPAQAVDPSASC*LLLFGWLLPCR Trigger: TCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS CAA 72 bp | CTCTCTTCCTGCTCAAGCTGTCGATCCCTCAGCATCTaGTTTGCTTCTGCTTTTTGGATGGCTTCTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LSSCSSCRSLSI*FASAFWMASSM Trigger: CATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS CAA 90 bp | TTTGCAAGTCTCTCTTCCTGCTCAAGCTGTCGATCCCTCAGCATCTaGTTTGCTTCTGCTTTTTGGATGGCTTCTTCCATGTCGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FASLSSCSSCRSLSI*FASAFWMASSMSSS Trigger: TGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACAGCTTGAGCAGGAAGAGAGACTTGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS CAA 90 bp | CTTTTCCTCGATCTCGTGAACTCTGGCCATCCGCTCGCCTTCTCTTaGCTCCTGTATGTTTGCAAACTCTATGATTTTCCGGTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFLDLVNSGHPLAFS*LLYVCKLYDFPVLF Trigger: GAAGAGAACCGGAAAATCATAGAGTTTGCAAACATACAGGAGCAAAGAGAAGGCGAGCGGATGGCCAGAGTTCACGAGATCGAGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS GCA 72 bp | AACCTCTGGCGTTCCACCTTCTCGTCGTTTTCATTTTaGACCACTTGGTTCTTGGCTTGCCTCTCTAACTTA | + |
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Preference number: 6 (lower is better) Translates to: NLWRSTFSSFSF*TTWFLACLSNL Trigger: TAAGTTAGAGAGGCAAGCCAAGAACCAAGTGGTGCAAAATGAAAACGACGAGAAGGTGGAACGCCAGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS GCA 72 bp | AACTCTCTGAGCTCAATGCTGTTCTCTCTCACTTGCTaGCTCATCTTCTTATCCTTCAGACTCTCGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NSLSSMLFSLTC*LIFLSFRLSCF Trigger: GAAGCACGAGAGTCTGAAGGATAAGAAGATGAGGCAGCAAGTGAGAGAGAACAGCATTGAGCTCAGAGAGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS GCA 72 bp | ATCATGATCCTTTCTATCTCCGCATCACGTTTCATCTaGTCATACTTCATGGCGTCCTTCTCCACGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: IMILSISASRFI*SYFMASFSTIW Trigger: CCAGATCGTGGAGAAGGACGCCATGAAGTATGAGCAGATGAAACGTGATGCGGAGATAGAAAGGATCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 |
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| CDS CCA 72 bp | TGTCGATCCCTCAGCATCTTGTTTGCTTCTGCTTTTTaGATGGCTTCTTCCATGTCGAGCTCAAACTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CRSLSILFASAF*MASSMSSSNCS Trigger: TGAGCAGTTTGAGCTCGACATGGAAGAAGCCATCCAAAAAGCAGAAGCAAACAAGATGCTGAGGGATCGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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| CDS CAA 90 bp | CTCTATGATTTTCCGGTTCTCTTCCTCCATCTCCTCACGCTTCTTTaGTCTCCAGAAGTCTTGTGCCCTCTGGAATTCTTCAATATACTT | + |
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Preference number: 6 (lower is better) Translates to: LYDFPVLFLHLLTLL*SPEVLCPLEFFNIL Trigger: AAGTATATTGAAGAATTCCAGAGGGCACAAGACTTCTGGAGACAAAAGAAGCGTGAGGAGATGGAGGAAGAGAACCGGAAAATCATAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS CAA 72 bp | CTCCATCTCCTCACGCTTCTTTTGTCTCCAGAAGTCTaGTGCCCTCTGGAATTCTTCAATATACTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LHLLTLLLSPEV*CPLEFFNILLN Trigger: ATTCAGAAGTATATTGAAGAATTCCAGAGGGCACAAGACTTCTGGAGACAAAAGAAGCGTGAGGAGATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034746.10 |
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| CDS GCA 72 bp | TCGTCGTTTTCATTTTGCACCACTTGGTTCTTGGCTTaGCTCTCTAACTTATTCATGACTTGTATGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SSFSFCTTWFLA*LSNLFMTCMFN Trigger: ATTGAACATACAAGTCATGAATAAGTTAGAGAGGCAAGCCAAGAACCAAGTGGTGCAAAATGAAAACGACGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034746.10 ENSMUST00000183809.8 ENSMUST00000184604.8 |
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