Pregenerated sensors for MNAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021103Ensembl transcript IDs: ENSMUST00000021523.7, ENSMUST00000187549.7, ENSMUST00000189644.7
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCCCGGACGTGGTTTAAATACCCAAGCCGTCCTAAGAGCTCTTaGTCAGGAACTTGTGGGCCACAGGTCTCTATCTGCAGGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AARTWFKYPSRPKSS*SGTCGPQVSICRGW Trigger: CCAGCCCCTGCAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAAGAGCTCTTAGGACGGCTTGGGTATTTAAACCACGTCCGGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR CCA 90 bp | GTCACTGGCTTCATGGATCTGGGCTTCTCGAGCTGCATTTCCAGCTaGGTCGATCTGTCTTTATGCTGCGCCAGGAGCAGAGCAACAGGG | + |
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Preference number: 1 (lower is better) Translates to: VTGFMDLGFSSCISS*VDLSLCCARSRATG Trigger: CCCTGTTGCTCTGCTCCTGGCGCAGCATAAAGACAGATCGACCCAGCTGGAAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR GCA 90 bp | CCTGTGGAAAACGTCACTGGCTTCATGGATCTGGGCTTCTCGAGCTaGATTTCCAGCTGGGTCGATCTGTCTTTATGCTGCGCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PVENVTGFMDLGFSS*ISSWVDLSLCCARS Trigger: GCTCCTGGCGCAGCATAAAGACAGATCGACCCAGCTGGAAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTTTTCCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR CCA 90 bp | AGCTCTTCTTCCTTTTGTATGAACAGCCGTCGCTGCTCATGTTCTTaGCGTTCTACCTCCAATGCTTCCTCCAACTCCTCCTGCTCCCGC | + |
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Preference number: 1 (lower is better) Translates to: SSSSFCMNSRRCSCS*RSTSNASSNSSCSR Trigger: GCGGGAGCAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR TCA 90 bp | GGGGCCCATGCGACAGACTCACACAGGCTGGGATGCTCATGCTTCTaGCCAACACACACCCAAACTACACAAAACCACAAGCACAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: GAHATDSHRLGCSCF*PTHTQTTQNHKHSK Trigger: TTTACTGTGCTTGTGGTTTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTGTGTGAGTCTGTCGCATGGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR CCA 90 bp | TGTGGCTCACAGCTGGGAACCACATTAGGTTTGCCTCACTTTGCATaGCTCAAAACAGTCCCCCAGACTCTTACTGCTGAGGAAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CGSQLGTTLGLPHFA*LKTVPQTLTAEEEP Trigger: TGGCTCTTCCTCAGCAGTAAGAGTCTGGGGGACTGTTTTGAGCCATGCAAAGTGAGGCAAACCTAATGTGGTTCCCAGCTGTGAGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR TCA 90 bp | ACCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTaGGCTCAATCAGTGAGTTCCAGGCTTGGTGAGAGACTCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: TTWEAESRIYTEQAG*AQSVSSRLGERLCL Trigger: GAGGCAGAGTCTCTCACCAAGCCTGGAACTCACTGATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR TCA 90 bp | TGTTCTTCCTTTTCAGAGCCTGCTGCAGCTCTTCTTCCTTTTGTATaGACAGCCGTCGCTGCTCATGTTCTTGGCGTTCTACCTCCAATG | + |
|
Preference number: 1 (lower is better) Translates to: CSSFSEPAAALLPFV*TAVAAHVLGVLPPM Trigger: CATTGGAGGTAGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAGGAAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR TCA 90 bp | CAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATCAGTaGGTTCCAGGCTTGGTGAGAGACTCTGCCTCAAAAGATAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QSQEYTQSKLVELNQ*VPGLVRDSASKDKV Trigger: CACCTTATCTTTTGAGGCAGAGTCTCTCACCAAGCCTGGAACTCACTGATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR TCA 90 bp | ATACATGAGAAAATACAGGTTATCTGGGCTGCCAGAAGAGCCCACTaGACGCATCCTGTAGCGCTCTGTGACAAGCAAGAGAAGAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: IHEKIQVIWAARRAH*THPVALCDKQEKKY Trigger: ATACTTCTTCTCTTGCTTGTCACAGAGCGCTACAGGATGCGTTCAGTGGGCTCTTCTGGCAGCCCAGATAACCTGTATTTTCTCATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR TCA 90 bp | ATAGATACTGTACCACCAAGAAATCGGAGAATGACTCCCCACTCCTaGAGCCTGGGAGGAGGAGGTGAGAATAATTTCACAGAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: IDTVPPRNRRMTPHS*SLGGGGENNFTEEK Trigger: TTTCTCTTCTGTGAAATTATTCTCACCTCCTCCTCCCAGGCTTCAGGAGTGGGGAGTCATTCTCCGATTTCTTGGTGGTACAGTATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR TCA 90 bp | ACTTTCAAACCCCTTGGTTTGGCTCCACAATCCAGATCTTATACATaGGAAAATACAGGTTATCTGGGCTGCCAGAAGAGCCCACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: TFKPLGLAPQSRSYT*ENTGYLGCQKSPLN Trigger: GTTCAGTGGGCTCTTCTGGCAGCCCAGATAACCTGTATTTTCTCATGTATAAGATCTGGATTGTGGAGCCAAACCAAGGGGTTTGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAACCAGCAGCAGTGGTGGTGTaGTGTGCAGCTGCGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QAGMLMLLTNTHPNYTKPAAVVV*CAAAGL Trigger: CAGCCCCGCAGCTGCACAGCACACCACCACTGCTGC...TGGTTTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAGCTCTTGCTCAGGAACTTGTGGGCCACAGGTCTCTATCTGCAGGGGCTGGTGTGCTGTGCAGCTaGGGGGCTGGAACTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: LRALAQELVGHRSLSAGAGVLCS*GAGTLQ Trigger: TTGTAAAGTTCCAGCCCCGCAGCTGCACAGCACACC...AGCCCCTGCAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAAGAGCTCTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR CAA 90 bp | CAGCTCTTCTTCCTTTTGTATGAACAGCCGTCGCTGCTCATGTTCTaGGCGTTCTACCTCCAATGCTTCCTCCAACTCCTCCTGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: QLFFLLYEQPSLLMF*AFYLQCFLQLLLLP Trigger: CGGGAGCAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAGCTCTTGCTCAGGAACTTGTGGGCCACAGGTCTCTATCTGCAGGGGCTCTGGCTTCATGGATCTaGGCTTCTCGAGCTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: LRALAQELVGHRSLSAGALASWI*ASRAAF Trigger: AAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAG...AGCCCCTGCAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAAGAGCTCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGTATAGCCGCCAGCAAGATCCTGTGGAGATGCAGCCCGGACGTGGTTTAGATCTGTCTTTATGCTaGGCCAGGAGCAGAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: KKYSRQQDPVEMQPGRGLDLSLC*ARSRAT Trigger: TGTTGCTCTGCTCCTGGCGCAGCATAAAGACAGATC...TAAACCACGTCCGGGCTGCATCTCCACAGGATCTTGCTGGCGGCTATACTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGACTGCAATAAACACCTGAGCACAGCAGCAGTGGTGGTGTGCTGTGCAGCTTACTTTCAAACCCCTTaGTTTGGCTCCACAATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PDCNKHLSTAAVVVCCAAYFQTP*FGSTIQ Trigger: CTGGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTA...AGCTGCACAGCACACCACCACTGCTGCTGTGCTCAGGTGTTTATTGCAGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR CAA 90 bp | CTGAAACTGCCAGCATTCATGTACATGATGGCACACACCCACCACTaGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LKLPAFMYMMAHTHH*GGRVKNIHRASWLS Trigger: GCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGGTGGGTGTGTGCCATCATGTACATGAATGCTGGCAGTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCTGCGGGGCTGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTACTGCAATAAACACCTaGGCACAGCAGCAGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CSCGAGTLQTSILSNPLVTAINT*AQQQWW Trigger: CCACCACTGCTGCTGTGCTCAGGTGTTTATTGCAGT...AACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCAGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR-3UTR TCA 90 bp | CACACAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAGGCCTGCTGCTAAGATaGAACATCTCCACTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HTGWDAHASDQHTPKLHKGLLLR*NISTCL Trigger: CAGACAAGTGGAGATGTTTCATCTTAGCAGCAGGCC...TTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR CCA 90 bp | CCACAACGAGCTGAGCTGAAACTGCCAGCATTCATGTACATGATGGCACACACCATACACAGAGCAAGCTaGTTGAGCTCAATCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PQRAELKLPAFMYMMAHTIHRAS*LSSISE Trigger: CTCACTGATTGAGCTCAACCAGCTTGCTCTGTGTAT...GGTGTGTGCCATCATGTACATGAATGCTGGCAGTTTCAGCTCAGCTCGTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR CAA 90 bp | CTGGTTTATCATTTCTGTGGCTCACAGCTGGGAACCACATTAGGTTaGCCTCACTTTGCATGGCTCAAAACAGTCCCCCAGACTCTTACT | + |
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Preference number: 2 (lower is better) Translates to: LVYHFCGSQLGTTLG*PHFAWLKTVPQTLT Trigger: AGTAAGAGTCTGGGGGACTGTTTTGAGCCATGCAAAGTGAGGCAAACCTAATGTGGTTCCCAGCTGTGAGCCACAGAAATGATAAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR GCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATAGATCTGTCTGCTTCTaGCTCCCAAAGGCTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: PLGRQSQEYTQSKLVELNRSVCF*LPKARI Trigger: AATCCTAGCCTTTGGGAGGCAGAAGCAGACAGATCT...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGGAGATGCAGCCCGGACGTGGTTTAAATACCCAAGCCGTCCTAAGAGCTCATCTAAAAAGGCCTaGTTGTTCTTCCTTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SCGDAARTWFKYPSRPKSSSKKA*LFFLFR Trigger: TCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGATGA...GCTCTTAGGACGGCTTGGGTATTTAAACCACGTCCGGGCTGCATCTCCACAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAACCACCCTTGAAGCTTTGGTaGGTGGAAAACTACATCAGT | + |
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Preference number: 2 (lower is better) Translates to: QAGMLMLLTNTHPNYTKPPLKLW*VENYIS Trigger: ACTGATGTAGTTTTCCACCCACCAAAGCTTCAAGGG...TGGTTTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR TCA 90 bp | AACTATGTTCACTTGTGTAAATATGGGTCTTGTTTAGAGCCACATTTCACAGGAATGACTCCCCACTCCTaGAGCCTGGGAGGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NYVHLCKYGSCLEPHFTGMTPHS*SLGGGG Trigger: ACCTCCTCCTCCCAGGCTTCAGGAGTGGGGAGTCAT...TCCTGTGAAATGTGGCTCTAAACAAGACCCATATTTACACAAGTGAACATAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCGCCACATCACAGTTGTaGTTTCTTGACACGGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSATSQL*FLDTAC Trigger: GCAGGCCGTGTCAAGAAAGCACAACTGTGATGTGGC...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR GCA 90 bp | CACACAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAAGCAGGTTAATGGCCTaGTCTGGTTTATCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HTGWDAHASDQHTPKLHKSRLMA*SGLSFL Trigger: CAGAAATGATAAACCAGAGCAGGCCATTAACCTGCT...TTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTCTTCCTTTTGTATGAACAGCCGTCGCTGCTCATGTTCTTGGCGTTCTTCAAACCCCTTGGTTTaGCTCCACAATCCAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: SSSSFCMNSRRCSCSWRSSNPLV*LHNPDL Trigger: AAGATCTGGATTGTGGAGCCAAACCAAGGGGTTTGA...AGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCACGTCACTGGCTTCATaGATCTGGGCTTCTCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSTSLAS*IWASRA Trigger: AGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGT...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCACAGTTGTGCTTTCTTaGCACGGCCTGCTGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSTVVLS*HGLLLR Trigger: TCTTAGCAGCAGGCCGTGTCAAGAAAGCACAACTGT...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATGAGAAAAATGCTAACTaGTTTCTATGGTATGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PLGRQSQEYTQSKLVELNEKNAN*FLWYAS Trigger: TGAGGCATACCATAGAAATCAGTTAGCATTTTTCTC...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR GCA 90 bp | AATGAGCTCACATTAGCAGTGAAAGGTGCCATTGATGTATTAAGTTTTATTAGCGGTGTGCTGTGCAGCTaGGGGGCTGGAACTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: NELTLAVKGAIDVLSFISGVLCS*GAGTLQ Trigger: TTGTAAAGTTCCAGCCCCGCAGCTGCACAGCACACC...GCTAATAAAACTTAATACATCAATGGCACCTTTCACTGCTAATGTGAGCTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAATACTTTCAAACCCCTTaGTTTGGCTCCACAATCCAG | + |
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Preference number: 2 (lower is better) Translates to: TSSMNLYATHFSAWSRLQYFQTP*FGSTIQ Trigger: CTGGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTA...TTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCATCACCAAAAGACACATATCTAATCACCTCCCACCAACTCAATCTCTACACACACCCACCACTTaGGAGGCAGAGTCAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: KSITKRHISNHLPPTQSLHTPTT*EAESRI Trigger: TATTCTTGACTCTGCCTCCCAAGTGGTGGGTGTGTG...TAGAGATTGAGTTGGTGGGAGGTGATTAGATATGTGTCTTTTGGTGATGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR TCA 90 bp | AACTATGTTCACTTGTGTAAATATGGGTCTTGTTTAGAGCCACATTTCACAGGACAGCATTCATGTACATaGTGGCACACACCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: NYVHLCKYGSCLEPHFTGQHSCT*WHTPTT Trigger: AGTGGTGGGTGTGTGCCATCATGTACATGAATGCTG...TCCTGTGAAATGTGGCTCTAAACAAGACCCATATTTACACAAGTGAACATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCTGCGGGGCTGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTTCCATGAATCTATATaGAACACATTTCTCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: CSCGAGTLQTSILSNPLVFHESI*NTFLSL Trigger: CAAGCTGAGAAATGTGTTGCATATAGATTCATGGAA...AACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCAGCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR-3UTR CCA 90 bp | AACTATGTTCACTTGTGTAAATATGGGTCTTGTTTAGAGCCACATTTCACAGGAAAACCAAGGGGTTGGTaGGCAACTGTTACTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: NYVHLCKYGSCLEPHFTGKPRGW*ATVTQD Trigger: GTCCTGAGTAACAGTTGCCCACCAACCCCTTGGTTT...TCCTGTGAAATGTGGCTCTAAACAAGACCCATATTTACACAAGTGAACATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAATAAACTCAAACCCCTTGGTTTaGCTCCACAATCCAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: FHESICNTFLSLVQTAINSNPLV*LHNPDL Trigger: AAGATCTGGATTGTGGAGCCAAACCAAGGGGTTTGA...GTTTATTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR CCA 72 bp | CCGCCAGCAAGATCCTGTGGAGATGCAGCCCGGACGTaGTTTAAATACCCAAGCCGTCCTAAGAGCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: PPARSCGDAART*FKYPSRPKSSC Trigger: GCAAGAGCTCTTAGGACGGCTTGGGTATTTAAACCACGTCCGGGCTGCATCTCCACAGGATCTTGCTGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCTCTTGCTCAGGAACTTGTGGGCCACAGGTCTCTATCTGCAGGGGCTGGCAGCTCTTCTTCCTTTaGTATGAACAGCCGTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: KSSCSGTCGPQVSICRGWQLFFL*YEQPSL Trigger: CAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTG...CCAGCCCCTGCAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAAGAGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR GCA 72 bp | CCTGAGCACAGCAGCAGTGGTGGTGTGCTGTGCAGCTaGGGGGCTGGAACTTTACAAACCTCTATACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: PEHSSSGGVLCS*GAGTLQTSILS Trigger: TGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCAGCTGCACAGCACACCACCACTGCTGCTGTGCTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR CCA 72 bp | TTCATGGATCTGGGCTTCTCGAGCTGCATTTCCAGCTaGGTCGATCTGTCTTTATGCTGCGCCAGGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FMDLGFSSCISS*VDLSLCCARSR Trigger: TCTGCTCCTGGCGCAGCATAAAGACAGATCGACCCAGCTGGAAATGCAGCTCGAGAAGCCCAGATCCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| 3UTR TCA 72 bp | ACATTTCTCAGCTTGGTCCAGACTGCAATAAACACCTaGGCACAGCAGCAGTGGTGGTGTGCTGTGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TFLSLVQTAINT*AQQQWWCAVQL Trigger: CAGCTGCACAGCACACCACCACTGCTGCTGTGCTCAGGTGTTTATTGCAGTCTGGACCAAGCTGAGAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| 3UTR GCA 72 bp | AACGTCACTGGCTTCATGGATCTGGGCTTCTCGAGCTaGATTTCCAGCTGGGTCGATCTGTCTTTATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NVTGFMDLGFSS*ISSWVDLSLCC Trigger: GCAGCATAAAGACAGATCGACCCAGCTGGAAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR CCA 72 bp | CAGCAGCAGTGGTGGTGTGCTGTGCAGCTGCGGGGCTaGAACTTTACAAACCTCTATACTTTCAAACCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQQWWCAVQLRG*NFTNLYTFKPL Trigger: AAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCAGCTGCACAGCACACCACCACTGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
||
| 3UTR TCA 72 bp | AAAATACAGGTTATCTGGGCTGCCAGAAGAGCCCACTaGACGCATCCTGTAGCGCTCTGTGACAAGCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KIQVIWAARRAH*THPVALCDKQE Trigger: CTCTTGCTTGTCACAGAGCGCTACAGGATGCGTTCAGTGGGCTCTTCTGGCAGCCCAGATAACCTGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR GCA 72 bp | CTCACAGCTGGGAACCACATTAGGTTTGCCTCACTTTaGATGGCTCAAAACAGTCCCCCAGACTCTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LTAGNHIRFASL*MAQNSPPDSYC Trigger: GCAGTAAGAGTCTGGGGGACTGTTTTGAGCCATGCAAAGTGAGGCAAACCTAATGTGGTTCCCAGCTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR GCA 72 bp | TGGCTGTCCTGGAACTCACAGAGATCTGTCTGCTTCTaGCTCCCAAAGGCTAGGATTAAAGATGTGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLSWNSQRSVCF*LPKARIKDVCL Trigger: GAGGCACACATCTTTAATCCTAGCCTTTGGGAGGCAGAAGCAGACAGATCTCTGTGAGTTCCAGGACAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR GCA 72 bp | ACGTGGTTTAAATACCCAAGCCGTCCTAAGAGCTCTTaGTCAGGAACTTGTGGGCCACAGGTCTCTATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TWFKYPSRPKSS*SGTCGPQVSIC Trigger: GCAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAAGAGCTCTTAGGACGGCTTGGGTATTTAAACCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR GCA 72 bp | TGCAGCTCTTCTTCCTTTTGTATGAACAGCCGTCGCTaGTCATGTTCTTGGCGTTCTACCTCCAATGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CSSSSFCMNSRR*SCSWRSTSNAS Trigger: GGAAGCATTGGAGGTAGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR-3UTR CAA 90 bp | ACGCATCCTGTAGCGCTCTGTGACAAGCAAGAGAAGAAGTATAGCCGCCAGCAATCTAAAAAGGCCTGCTaGTTCTTCCTTTTCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: THPVALCDKQEKKYSRQQSKKAC*FFLFRA Trigger: GGCTCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGA...TTGCTGGCGGCTATACTTCTTCTCTTGCTTGTCACAGAGCGCTACAGGATGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR TCA 72 bp | GAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTaGGCTCAATCAGTGAGTTCCAGGCTTGGTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EAESRIYTEQAG*AQSVSSRLGER Trigger: TCTCTCACCAAGCCTGGAACTCACTGATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR TCA 72 bp | TTTTCAGAGCCTGCTGCAGCTCTTCTTCCTTTTGTATaGACAGCCGTCGCTGCTCATGTTCTTGGCGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSEPAAALLPFV*TAVAAHVLGVL Trigger: TAGAACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR CCA 72 bp | AGCAGGTTAATGGCCTGCTCTGGTTTATCATTTCTGTaGCTCACAGCTGGGAACCACATTAGGTTTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLMACSGLSFL*LTAGNHIRFAS Trigger: TGAGGCAAACCTAATGTGGTTCCCAGCTGTGAGCCACAGAAATGATAAACCAGAGCAGGCCATTAACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR TCA 72 bp | GAATATACACAGAGCAAGCTGGTTGAGCTCAATCAGTaGGTTCCAGGCTTGGTGAGAGACTCTGCCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EYTQSKLVELNQ*VPGLVRDSASK Trigger: TTTTGAGGCAGAGTCTCTCACCAAGCCTGGAACTCACTGATTGAGCTCAACCAGCTTGCTCTGTGTATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR GCA 72 bp | ATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTaGAATAAACACCTGAGCACAGCAGCAGTGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IYMQHISQLGPD*NKHLSTAAVVV Trigger: CACCACCACTGCTGCTGTGCTCAGGTGTTTATTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
||
| 3UTR CCA 72 bp | CTGTTGACCCATTTTAATTCCTGTGGAAAACGTCACTaGCTTCATGGATCTGGGCTTCTCGAGCTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLTHFNSCGKRH*LHGSGLLELHF Trigger: GAAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTTTTCCACAGGAATTAAAATGGGTCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR CCA 72 bp | TTGAATCTGCCATTAAAGCAGGTTAATGGCCTGCTCTaGTTTATCATTTCTGTGGCTCACAGCTGGGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: LNLPLKQVNGLL*FIISVAHSWEP Trigger: TGGTTCCCAGCTGTGAGCCACAGAAATGATAAACCAGAGCAGGCCATTAACCTGCTTTAATGGCAGATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR TCA 72 bp | CAACTGTTACTCAGGACAGAAACCAGTTATAGCAAATaGCTTCACATACTGGGGGCAAGGGGCTCAATATTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLRTETSYSK*LHILGARGSIL Trigger: CAATATTGAGCCCCTTGCCCCCAGTATGTGAAGTCATTTGCTATAACTGGTTTCTGTCCTGAGTAACAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR GCA 72 bp | AATGCCTATAAATGGACACTCTGCAAAATACAGGCATaGTATACTCCAGATAGTCAGGGTCATCAGGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: NAYKWTLCKIQA*YTPDSQGHQAY Trigger: ATATGCCTGATGACCCTGACTATCTGGAGTATAGCATGCCTGTATTTTGCAGAGTGTCCATTTATAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTATGTTCACTTGTGTAAATATGGGTCTTGTTTAGAGCCACATTTCACAGGAAGTGGTGGTAAAGTGTaGTACAACCACAACGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NYVHLCKYGSCLEPHFTGSGGKV*YNHNEL Trigger: CAGCTCGTTGTGGTTGTACAACACTTTACCACCACT...TCCTGTGAAATGTGGCTCTAAACAAGACCCATATTTACACAAGTGAACATAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR TCA 72 bp | AATGAAGGGATGCCAATGGTCACTCTTCCCTCAATCTaGACTGATGGTAACCAAAATGTCAAAGAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NEGMPMVTLPSI*TDGNQNVKETN Trigger: GTTTGTTTCTTTGACATTTTGGTTACCATCAGTTCAGATTGAGGGAAGAGTGACCATTGGCATCCCTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR GCA 72 bp | AGGGTAAAGCAGATAAATGCCTATAAATGGACACTCTaGAAAATACAGGCATGCTATACTCCAGATAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVKQINAYKWTL*KIQACYTPDSQ Trigger: CTGACTATCTGGAGTATAGCATGCCTGTATTTTGCAGAGTGTCCATTTATAGGCATTTATCTGCTTTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR TCA 72 bp | GTATGCCTCATGAACATGTATACTCTGACCTCATTATaGAGGGTAAAGCAGATAAATGCCTATAAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VCLMNMYTLTSL*RVKQINAYKWT Trigger: TGTCCATTTATAGGCATTTATCTGCTTTACCCTTCATAATGAGGTCAGAGTATACATGTTCATGAGGCATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR TCA 72 bp | AGAATAATTTCACAGAAGAGAAAATCCTCAGCCTGCTaGTCAAGGTTGACACCAAATGTAATGATGTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RIISQKRKSSAC*SRLTPNVMMSY Trigger: ATAGGACATCATTACATTTGGTGTCAACCTTGATCAGCAGGCTGAGGATTTTCTCTTCTGTGAAATTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR GCA 72 bp | ATATACAATGCATTAAACAACAGTATAATGAAGGGATaGCAATGGTCACTCTTCCCTCAATCTGAACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: IYNALNNSIMKG*QWSLFPQSELM Trigger: CATCAGTTCAGATTGAGGGAAGAGTGACCATTGGCATCCCTTCATTATACTGTTGTTTAATGCATTGTATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR CCA 72 bp | ACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTaGCTCCACAATCCAGATCTTATACATGAGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TLQTSILSNPLV*LHNPDLIHEKI Trigger: TATTTTCTCATGTATAAGATCTGGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAACCATGGTGGTCTTACACCTaGGGCAGCCCTGGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGMLMLLTNTHPNYTKPWWSYT*GSPGRP Trigger: TGGACGACCAGGGCTGCCCCAGGTGTAAGACCACCA...TGGTTTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTCTTCTTCCTTTTGTATGAACAGCCGTCGCTGCTCATGTTCTTGGCGTTGGTGGTCTTACACCTaGGGCAGCCCTGGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSFCMNSRRCSCSWRWWSYT*GSPGRP Trigger: TGGACGACCAGGGCTGCCCCAGGTGTAAGACCACCA...ACGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCGTTCTACCTCCAATGCTTCCTCCAACTCCTCCTGCTCCCGCGTCAGCTTGTTGCTCTTTCTCAGTaGAGTCCCACACTCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LAFYLQCFLQLLLLPRQLVALSQ*SPTLRT Trigger: TGTCCTGAGTGTGGGACTCCACTGAGAAAGAGCAAC...AAGCTGACGCGGGAGCAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| CDS-3UTR GCA 90 bp | CACACAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAAGCGTTCTACCTCCAATaGTTCCTCCAACTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGWDAHASDQHTPKLHKAFYLQ*FLQLLL Trigger: CAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGC...TTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR CCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATAAGGGTTCCGGTACTTaGTGGTCTTACACCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLGRQSQEYTQSKLVELNKGSGT*WSYTWG Trigger: GCCCCAGGTGTAAGACCACCAAGTACCGGAACCCTT...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR CCA 90 bp | ATTGTAGGTATATTGATTTCTGTCCACGAGTGCAGCAAAGCCCTAGCCGTGGGCACGTCACTGGCTTCATaGATCTGGGCTTCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVGILISVHECSKALAVGTSLAS*IWASRA Trigger: AGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGT...GCCCACGGCTAGGGCTTTGCTGCACTCGTGGACAGAAATCAATATACCTACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR CAA 72 bp | CATTTCTGTGGCTCACAGCTGGGAACCACATTAGGTTaGCCTCACTTTGCATGGCTCAAAACAGTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFCGSQLGTTLG*PHFAWLKTVPQ Trigger: CTGGGGGACTGTTTTGAGCCATGCAAAGTGAGGCAAACCTAATGTGGTTCCCAGCTGTGAGCCACAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR CAA 72 bp | CTTCCTTTTCAGAGCCTGCTGCAGCTCTTCTTCCTTTaGTATGAACAGCCGTCGCTGCTCATGTTCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPFQSLLQLFFL*YEQPSLLMFLA Trigger: CGCCAAGAACATGAGCAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| 3UTR CAA 72 bp | AGGTCGGAGCTCTCCAGCTCATCTAAAAAGGCCTGCTaGTTCTTCCTTTTCAGAGCCTGCTGCAGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSELSSSSKKAC*FFLFRACCSSS Trigger: AGAAGAGCTGCAGCAGGCTCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGATGAGCTGGAGAGCTCCGACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
||
| CDS-3UTR TCA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCGCCAGAAGAGCCCACTaGACGCATCCTGTAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSARRAH*THPVAL Trigger: GAGCGCTACAGGATGCGTTCAGTGGGCTCTTCTGGC...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR CCA 90 bp | CACACAGGCTGGGATGCTCATGCTTCTGACCAACACACACCCAAACTACACAAATTGCTCAGGAACTTGTaGGCCACAGGTCTCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGWDAHASDQHTPKLHKLLRNL*ATGLYL Trigger: CAGATAGAGACCTGTGGCCCACAAGTTCCTGAGCAA...TTTGTGTAGTTTGGGTGTGTGTTGGTCAGAAGCATGAGCATCCCAGCCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR CAA 72 bp | ACTGCTGAGGAAGAGCCACATCACAGTTGTGCTTTCTaGACACGGCCTGCTGCTAAGATGAAACATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAEEEPHHSCAF*TRPAAKMKHLH Trigger: GTGGAGATGTTTCATCTTAGCAGCAGGCCGTGTCAAGAAAGCACAACTGTGATGTGGCTCTTCCTCAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| 3UTR CAA 72 bp | CCAGCATTCATGTACATGATGGCACACACCCACCACTaGGGAGGCAGAGTCAAGAATATACACAGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFMYMMAHTHH*GGRVKNIHRAS Trigger: GCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGGTGGGTGTGTGCCATCATGTACATGAATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| 3UTR CAA 72 bp | GCATTTCTCTGGTTGCTTGTTTGGAAAGTGGTGACATaGGCTTCCCAGCCTAAGGCAGAACTGACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLWLLVWKVVT*ASQPKAELTPN Trigger: GTTTGGGGTCAGTTCTGCCTTAGGCTGGGAAGCCAATGTCACCACTTTCCAAACAAGCAACCAGAGAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTGCGGGGCTGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTGATCTGTCTTTATGCTaGGCCAGGAGCAGAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSCGAGTLQTSILSNPLVDLSLC*ARSRAT Trigger: TGTTGCTCTGCTCCTGGCGCAGCATAAAGACAGATC...AACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCAGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR CCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATGTTGCTCTTTCTCAGTaGAGTCCCACACTCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PLGRQSQEYTQSKLVELNVALSQ*SPTLRT Trigger: TGTCCTGAGTGTGGGACTCCACTGAGAAAGAGCAAC...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR CCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATCTGGCTTCATGGATCTaGGCTTCTCGAGCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLGRQSQEYTQSKLVELNLASWI*ASRAAF Trigger: AAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAG...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR GCA 90 bp | ATTGTAGGTATATTGATTTCTGTCCACGAGTGCAGCAAAGCCCTAGCCGTGGGCCTTTTCAGAGCCTGCTaGAGCTCTTCTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVGILISVHECSKALAVGLFRAC*SSSSFC Trigger: ACAAAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAG...GCCCACGGCTAGGGCTTTGCTGCACTCGTGGACAGAAATCAATATACCTACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGCATCACCAAAAGACACATATCTAATCACCTCCCACCAACTCAATCTCTATGGTGGTCTTACACCTaGGGCAGCCCTGGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSITKRHISNHLPPTQSLWWSYT*GSPGRP Trigger: TGGACGACCAGGGCTGCCCCAGGTGTAAGACCACCA...TAGAGATTGAGTTGGTGGGAGGTGATTAGATATGTGTCTTTTGGTGATGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR CCA 90 bp | GCTAGGATTAAAGATGTGTGCCTCAACACCCAGAAAATTCTGTGTGTGTGTGTGACGTCACTGGCTTCATaGATCTGGGCTTCTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARIKDVCLNTQKILCVCVTSLAS*IWASRA Trigger: AGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGT...CACACACACACACAGAATTTTCTGGGTGTTGAGGCACACATCTTTAATCCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR GCA 90 bp | TGCGGGGCTGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCTTCCTTTTCAGAGCCTaGTGCAGCTCTTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGAGTLQTSILSNPLVWLFLFRA*CSSSSF Trigger: AAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAGGAA...GAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGCCCCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR GCA 90 bp | GATGTGTGCCTCAACACCCAGAAAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTTTTCAGAGCCTaGTGCAGCTCTTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DVCLNTQKILCVCVCVCVFLFRA*CSSSSF Trigger: AAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAGGAA...CACACACACACACACACACACACACAGAATTTTCTGGGTGTTGAGGCACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAATATCCTCCAACTCCTCCTaGTCCCGCGTCAGCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFHESICNTFLSLVQTAISSNSS*SRVSFN Trigger: ATTAAAGCTGACGCGGGAGCAGGAGGAGTTGGAGGA...TATTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCTATAAATGGACACTCTGCAAAATACAGGCATGCTATACTCCAGATAGTCGCGTTCTACCTCCAATaGTTCCTCCAACTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPINGHSAKYRHAILQIVAFYLQ*FLQLLL Trigger: CAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGC...GACTATCTGGAGTATAGCATGCCTGTATTTTGCAGAGTGTCCATTTATAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAAGTTGCTCTTTCTCAGTaGAGTCCCACACTCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSSMNLYATHFSAWSRLQVALSQ*SPTLRT Trigger: TGTCCTGAGTGTGGGACTCCACTGAGAAAGAGCAAC...TTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
||
| CDS-3UTR CCA 90 bp | TCTGTGACAAGCAAGAGAAGAAGTATAGCCGCCAGCAAGATCCTGTGGAGATGCCCTCCTTATCAACAGTaGGATCTTCAAAGAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVTSKRRSIAASKILWRCPPYQQ*DLQRVV Trigger: TACAACTCTTTGAAGATCCCACTGTTGATAAGGAGG...GCATCTCCACAGGATCTTGCTGGCGGCTATACTTCTTCTCTTGCTTGTCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189644.7 |
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| CDS-3UTR GCA 90 bp | AAAAGCATCACCAAAAGACACATATCTAATCACCTCCCACCAACTCAATCTCTATCCTCCAACTCCTCCTaGTCCCGCGTCAGCTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: KSITKRHISNHLPPTQSLSSNSS*SRVSFN Trigger: ATTAAAGCTGACGCGGGAGCAGGAGGAGTTGGAGGA...TAGAGATTGAGTTGGTGGGAGGTGATTAGATATGTGTCTTTTGGTGATGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR GCA 90 bp | ATGCCTATAAATGGACACTCTGCAAAATACAGGCATGCTATACTCCAGATAGTCGATCTGTCTTTATGCTaGGCCAGGAGCAGAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: MPINGHSAKYRHAILQIVDLSLC*ARSRAT Trigger: TGTTGCTCTGCTCCTGGCGCAGCATAAAGACAGATC...GACTATCTGGAGTATAGCATGCCTGTATTTTGCAGAGTGTCCATTTATAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATCCTCCTTATCAACAGTaGGATCTTCAAAGAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: PLGRQSQEYTQSKLVELNPPYQQ*DLQRVV Trigger: TACAACTCTTTGAAGATCCCACTGTTGATAAGGAGG...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR GCA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATTCATCTAAAAAGGCCTaGTTGTTCTTCCTTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLGRQSQEYTQSKLVELNSSKKA*LFFLFR Trigger: TCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGATGA...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CCA 90 bp | AATTTATGCAGAGAAATTTCACTTACATGGTACCTTTTCCAGTCTCAACATCTCAAGGGTTCCGGTACTTaGTGGTCTTACACCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NLCREISLTWYLFQSQHLKGSGT*WSYTWG Trigger: GCCCCAGGTGTAAGACCACCAAGTACCGGAACCCTT...GAGATGTTGAGACTGGAAAAGGTACCATGTAAGTGAAATTTCTCTGCATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR CAA 72 bp | GCTGGAACTTTACAAACCTCTATACTTTCAAACCCCTaGGTTTGGCTCCACAATCCAGATCTTATACATGAG | + |
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Preference number: 4 (lower is better) Translates to: AGTLQTSILSNP*VWLHNPDLIHE Trigger: CTCATGTATAAGATCTGGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| CDS-3UTR TCA 90 bp | GCTAGGATTAAAGATGTGTGCCTCAACACCCAGAAAATTCTGTGTGTGTGTGTGCATTGTTGGTCAAATTaGAAACGATTTCCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: ARIKDVCLNTQKILCVCVHCWSN*KRFPPL Trigger: AAGTGGAGGAAATCGTTTTCAATTTGACCAACAATG...CACACACACACACAGAATTTTCTGGGTGTTGAGGCACACATCTTTAATCCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CCA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCCCTCCTTATCAACAGTaGGATCTTCAAAGAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSPPYQQ*DLQRVV Trigger: TACAACTCTTTGAAGATCCCACTGTTGATAAGGAGG...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| CDS-3UTR CCA 90 bp | AATGAGCTCACATTAGCAGTGAAAGGTGCCATTGATGTATTAAGTTTTATTAGCCTGGCTTCATGGATCTaGGCTTCTCGAGCTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: NELTLAVKGAIDVLSFISLASWI*ASRAAF Trigger: AAATGCAGCTCGAGAAGCCCAGATCCATGAAGCCAG...GCTAATAAAACTTAATACATCAATGGCACCTTTCACTGCTAATGTGAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR TCA 90 bp | ACCTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAACATTGTTGGTCAAATTaGAAACGATTTCCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: TSSMNLYATHFSAWSRLQHCWSN*KRFPPL Trigger: AAGTGGAGGAAATCGTTTTCAATTTGACCAACAATG...TTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR GCA 90 bp | AATTTATGCAGAGAAATTTCACTTACATGGTACCTTTTCCAGTCTCAACATCTCTCATCTAAAAAGGCCTaGTTGTTCTTCCTTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: NLCREISLTWYLFQSQHLSSKKA*LFFLFR Trigger: TCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGATGA...GAGATGTTGAGACTGGAAAAGGTACCATGTAAGTGAAATTTCTCTGCATAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR CAA 72 bp | TGCACTGAAATGGATCCCCACCCAATAAAGATGGTATaGTTACATATGACTATTAACACTAACATAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: CTEMDPHPIKMV*LHMTINTNITR Trigger: TCTGGTTATGTTAGTGTTAATAGTCATATGTAACAATACCATCTTTATTGGGTGGGGATCCATTTCAGTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| 3UTR CAA 72 bp | ACATCACTGAAAATATCTATTAACCAAAACCTGCGTTaGACAAGTTACAGAAGTGTCATGTTTAGAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: TSLKISINQNLR*TSYRSVMFRTQ Trigger: CTGAGTTCTAAACATGACACTTCTGTAACTTGTCAAACGCAGGTTTTGGTTAATAGATATTTTCAGTGATGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | ATTGTAGGTATATTGATTTCTGTCCACGAGTGCAGCAAAGCCCTAGCCGTGGGCGAAGGGTTCCGGTACTaGGTGGTCTTACACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: IVGILISVHECSKALAVGEGFRY*VVLHLG Trigger: CCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTC...GCCCACGGCTAGGGCTTTGCTGCACTCGTGGACAGAAATCAATATACCTACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR CAA 90 bp | CCACTTGGGAGGCAGAGTCAAGAATATACACAGAGCAAGCTGGTTGAGCTCAATGAAGGGTTCCGGTACTaGGTGGTCTTACACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PLGRQSQEYTQSKLVELNEGFRY*VVLHLG Trigger: CCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTC...ATTGAGCTCAACCAGCTTGCTCTGTGTATATTCTTGACTCTGCCTCCCAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | CCACAACGAGCTGAGCTGAAACTGCCAGCATTCATGTACATGATGGCACACACCGGGATCTTCAAAGAGTaGTACCCTGAAGTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PQRAELKLPAFMYMMAHTGIFKE*YPEVAL Trigger: AAGAGCAACTTCAGGGTACAACTCTTTGAAGATCCC...GGTGTGTGCCATCATGTACATGAATGCTGGCAGTTTCAGCTCAGCTCGTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | GATGTGTGCCTCAACACCCAGAAAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGCAGCTCTTCTTCCTTTaGTATGAACAGCCGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: DVCLNTQKILCVCVCVCVQLFFL*YEQPSL Trigger: CAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTG...CACACACACACACACACACACACACAGAATTTTCTGGGTGTTGAGGCACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | CCACAACGAGCTGAGCTGAAACTGCCAGCATTCATGTACATGATGGCACACACCTCTAAAAAGGCCTGCTaGTTCTTCCTTTTCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PQRAELKLPAFMYMMAHTSKKAC*FFLFRA Trigger: GGCTCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGA...GGTGTGTGCCATCATGTACATGAATGCTGGCAGTTTCAGCTCAGCTCGTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS CCA 90 bp | AGTGGGATCTTCAAAGAGTTGTACCCTGAAGTTGCTCTTTCTCAGTaGAGTCCCACACTCAGGACAGTTTCCAGCTCCTCTTACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: SGIFKELYPEVALSQ*SPTLRTVSSSSYKQ Trigger: CTGTTTGTAAGAGGAGCTGGAAACTGTCCTGAGTGTGGGACTCCACTGAGAAAGAGCAACTTCAGGGTACAACTCTTTGAAGATCCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021523.7 ENSMUST00000187549.7 ENSMUST00000189644.7 |
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| CDS-3UTR CAA 90 bp | TTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAATAAACGAAGGGTTCCGGTACTaGGTGGTCTTACACCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: FHESICNTFLSLVQTAINEGFRY*VVLHLG Trigger: CCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTC...GTTTATTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| CDS TCA 90 bp | TTTCAACCTCCTTATCAACAGTGGGATCTTCAAAGAGTTGTACCCTaGAGTTGCTCTTTCTCAGTGGAGTCCCACACTCAGGACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: FQPPYQQWDLQRVVP*SCSFSVESHTQDSF Trigger: GAAACTGTCCTGAGTGTGGGACTCCACTGAGAAAGAGCAACTTCAGGGTACAACTCTTTGAAGATCCCACTGTTGATAAGGAGGTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021523.7 ENSMUST00000187549.7 ENSMUST00000189644.7 |
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| CDS-3UTR CAA 90 bp | ACCTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAAGGGATCTTCAAAGAGTaGTACCCTGAAGTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: TSSMNLYATHFSAWSRLQGIFKE*YPEVAL Trigger: AAGAGCAACTTCAGGGTACAACTCTTTGAAGATCCC...TTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021523.7 ENSMUST00000189644.7 |
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| CDS-3UTR CAA 90 bp | GATGTGTGCCTCAACACCCAGAAAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTCCAAATCCACATaGTTGGTCAAATTGAAAACG | + |
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Preference number: 5 (lower is better) Translates to: DVCLNTQKILCVCVCVCVFSKST*LVKLKT Trigger: CGTTTTCAATTTGACCAACAATGTGGATTTGGAGAA...CACACACACACACACACACACACACAGAATTTTCTGGGTGTTGAGGCACACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | CTCTTCCATGAATCTATATGCAACACATTTCTCAGCTTGGTCCAGACTGCAATATCTAAAAAGGCCTGCTaGTTCTTCCTTTTCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LFHESICNTFLSLVQTAISKKAC*FFLFRA Trigger: GGCTCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGA...TATTGCAGTCTGGACCAAGCTGAGAAATGTGTTGCATATAGATTCATGGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR CAA 90 bp | AATGAGCTCACATTAGCAGTGAAAGGTGCCATTGATGTATTAAGTTTTATTAGCCAGCTCTTCTTCCTTTaGTATGAACAGCCGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: NELTLAVKGAIDVLSFISQLFFL*YEQPSL Trigger: CAGCGACGGCTGTTCATACAAAAGGAAGAAGAGCTG...GCTAATAAAACTTAATACATCAATGGCACCTTTCACTGCTAATGTGAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR CAA 90 bp | TGGAACTTTACAAACCTCTATACTTTCAAACCCCTTGGTTTGGCTCCACAATCCTTCTCCAAATCCACATaGTTGGTCAAATTGAAAACG | + |
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Preference number: 5 (lower is better) Translates to: WNFTNLYTFKPLGLAPQSFSKST*LVKLKT Trigger: CGTTTTCAATTTGACCAACAATGTGGATTTGGAGAA...GGATTGTGGAGCCAAACCAAGGGGTTTGAAAGTATAGAGGTTTGTAAAGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR CAA 90 bp | AACTATGTTCACTTGTGTAAATATGGGTCTTGTTTAGAGCCACATTTCACAGGAACATTGTTGGTCAAATaGAAAACGATTTCCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: NYVHLCKYGSCLEPHFTGTLLVK*KTISST Trigger: AGTGGAGGAAATCGTTTTCAATTTGACCAACAATGT...TCCTGTGAAATGTGGCTCTAAACAAGACCCATATTTACACAAGTGAACATAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187549.7 |
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| CDS-3UTR CAA 90 bp | AATTTATGCAGAGAAATTTCACTTACATGGTACCTTTTCCAGTCTCAACATCTCCTTCCAGCTTTTGGATaGGTGCTAATGAAATCTGTT | + |
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Preference number: 5 (lower is better) Translates to: NLCREISLTWYLFQSQHLLPAFG*VLMKSV Trigger: AACAGATTTCATTAGCACCAATCCAAAAGCTGGAAG...GAGATGTTGAGACTGGAAAAGGTACCATGTAAGTGAAATTTCTCTGCATAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS-3UTR CAA 90 bp | AATGAGCTCACATTAGCAGTGAAAGGTGCCATTGATGTATTAAGTTTTATTAGCACATTGTTGGTCAAATaGAAAACGATTTCCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: NELTLAVKGAIDVLSFISTLLVK*KTISST Trigger: AGTGGAGGAAATCGTTTTCAATTTGACCAACAATGT...GCTAATAAAACTTAATACATCAATGGCACCTTTCACTGCTAATGTGAGCTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021523.7 |
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| CDS CCA 72 bp | CGTTCACCATCAGCTTCAAAGAAGGGTTCCGGTACTTaGTGGTCTTACACCTGGGGCAGCCCTGGTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSPSASKKGSGT*WSYTWGSPGRP Trigger: TGGACGACCAGGGCTGCCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTCTTTGAAGCTGATGGTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021523.7 ENSMUST00000187549.7 ENSMUST00000189644.7 |
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| CDS CAA 72 bp | ACGTTCACCATCAGCTTCAAAGAAGGGTTCCGGTACTaGGTGGTCTTACACCTGGGGCAGCCCTGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: TFTISFKEGFRY*VVLHLGQPWSS Trigger: GGACGACCAGGGCTGCCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTCTTTGAAGCTGATGGTGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021523.7 ENSMUST00000187549.7 ENSMUST00000189644.7 |
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