RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070576

Ensembl transcript IDs: ENSMUST00000094463.5

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCCCTCTaGGCCCCATCACAACGCCCAGGCAACAAGTGCAGATCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: GPFLLHQPIPPVSAL*APSQRPGNKCRSWG
Trigger: CCCCCAGGATCTGCACTTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR TCA 90 bp CCAGTAAGTCCCTTAGACAACTGGCAGACCCTCCCTTGTGCCCTTTaGGGGTCACAAGGCCACAGAGAAGGCAGAGGGCGCAACGGTAGC +
Preference number: 1 (lower is better)
Translates to: PVSPLDNWQTLPCAL*GSQGHREGRGRNGS
Trigger: GCTACCGTTGCGCCCTCTGCCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 90 bp AAGCCATCCCTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTaGTCCACCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCAT +
Preference number: 1 (lower is better)
Translates to: KPSLHCFGHKTEGPS*STSPYHLCLPSEPH
Trigger: ATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAGGGATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CCA 90 bp TGCTCCTGTGGCCCATGGAGGAGAGAAGCCATCCCTTCACTGCTTTaGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCA +
Preference number: 1 (lower is better)
Translates to: CSCGPWRREAIPSLL*AQNRGPFLLHQPIP
Trigger: TGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAGGGATGGCTTCTCTCCTCCATGGGCCACAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 90 bp AACAGGGCCAGTAAGTCCCTTAGACAACTGGCAGACCCTCCCTTGTaGCCTTTGAGGGTCACAAGGCCACAGAGAAGGCAGAGGGCGCAA +
Preference number: 1 (lower is better)
Translates to: NRASKSLRQLADPPL*PLRVTRPQRRQRAQ
Trigger: TTGCGCCCTCTGCCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACTTACTGGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 90 bp CTAGGATCTGTGCAGGACCGAAGAGTGTCTCAGCCTGAATTTGGCTaGCTCAATCCCTCCTCCCAGGGATGGATTCACTTAGGGATGCTA +
Preference number: 1 (lower is better)
Translates to: LGSVQDRRVSQPEFG*LNPSSQGWIHLGML
Trigger: TAGCATCCCTAAGTGAATCCATCCCTGGGAGGAGGGATTGAGGCAGCCAAATTCAGGCTGAGACACTCTTCGGTCCTGCACAGATCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACAGTCGACACTGGCATaGCCCTGCTACATCCACCCG +
Preference number: 2 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVQSTLA*PCYIHP
Trigger: CGGGTGGATGTAGCAGGGTCATGCCAGTGTCGACTG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCTATGCGAGGTGGAACTaGGGCACCCTGGCTGCCATC +
Preference number: 2 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCYARWN*GTLAAI
Trigger: GATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATA...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACTCCCTTGTGCCCTTTaGGGGTCACAAGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVLPCAL*GSQGHR
Trigger: TCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCCTGTGTCTGCCCTCTaGGCCCCATCACAACGCCCA +
Preference number: 2 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYPVSAL*APSQRP
Trigger: TGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGG...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 90 bp GAGAACAGGGCCAGTAAGTCCCTTAGACAACTGGCAGACCCTCCCTaGTGCCCTTTGAGGGTCACAAGGCCACAGAGAAGGCAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: ENRASKSLRQLADPP*CPLRVTRPQRRQRA
Trigger: CGCCCTCTGCCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACTTACTGGCCCTGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAAAGGAGAGGGTGCCCATaGCACCAGCATCCAACTCAC +
Preference number: 2 (lower is better)
Translates to: LGMLCEVELRHPGCHLGERRGCP*HQHPTH
Trigger: GTGAGTTGGATGCTGGTGTCATGGGCACCCTCTCCT...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR GCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAAGCAGACCCTCCCTTGTaGCCTTTGAGGGTCACAAGG +
Preference number: 2 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEADPPL*PLRVTR
Trigger: CCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGC...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAGAACCCTTTCCATTCTaGGTGCCACTAAGAAAGTAC +
Preference number: 2 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATEPFPF*VPLRKY
Trigger: GTACTTTCTTAGTGGCACTCAGAATGGAAAGGGTTC...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR GCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACGAAAAGACCTCTCTCTaGAAGTTCTCAGGGAGCACA +
Preference number: 2 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYEKTSL*KFSGST
Trigger: TGTGCTCCCTGAGAACTTGCAGAGAGAGGTCTTTTC...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR GCA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCCATCCACCCGGGGAGTaGTCCAGGACACAATCTTCC +
Preference number: 2 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSHPPGE*SRTQSS
Trigger: GGAAGATTGTGTCCTGGAGCACTCCCCGGGTGGATG...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CCA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCGGAACTGAGGCACCCTaGCTGCCATCTGGGAGAACA +
Preference number: 2 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSGTEAP*LPSGRT
Trigger: TGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCC...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATGGAGGATGCTCCTGTaGCCCATGGAGGAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAWRMLL*PMEERS
Trigger: GCTTCTCTCCTCCATGGGCCACAGGAGCATCCTCCA...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCACATACCACCTGTGTCTaGCCTCTGAGCCCCATCACA +
Preference number: 2 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAHTTCV*PLSPIT
Trigger: TGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATG...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTTGCTCCTGTGGCCCATaGAGGAGAGAAGCCATCCCT +
Preference number: 2 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFCSCGP*RREAIP
Trigger: AGGGATGGCTTCTCTCCTCCATGGGCCACAGGAGCA...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAAGGGACTGCTCCCAATaGGAGGAATGGAAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQARDCSQ*EEWKLS
Trigger: ACTAAGCTTCCATTCCTCTCATTGGGAGCAGTCCCT...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAAGTCCCTTAGACAACTaGCAGACCCTCCCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQSPLDN*QTLPCA
Trigger: GGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACT...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTAACTGTCATTCTTGTTTaGGGACTGAAAGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLTVILV*GLKGWH
Trigger: GTGCCAGCCTTTCAGTCCCCAAACAAGAATGACAGT...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCCCCAGCCTTAAGCACTaGAAACTGTCATTCTTGTTT +
Preference number: 2 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSPSLKH*KLSFLF
Trigger: AAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGG...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAGCTTGTAAATCAGAATaGAACCAAATCCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAACKSE*NQIQRA
Trigger: TGCCCTTTGGATTTGGTTTCATTCTGATTTACAAGC...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR TCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTATCAGAAAGGAGTAATTaGAGAGACACACTAACAACA +
Preference number: 2 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLSERSN*RDTLTT
Trigger: TGTTGTTAGTGTGTCTCTTCAATTACTCCTTTCTGA...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp GCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTaGCCTCTGAGCCCCATCACAACGCCCAGGCAACAA +
Preference number: 3 (lower is better)
Translates to: ALPAPPAHTTCV*PLSPITTPRQQ
Trigger: TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CAA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACCTCCCTTGTGCCCTTaGAGGGTCACAAGGCCACAG +
Preference number: 3 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVPPLCP*RVTRPQ
Trigger: CTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CAA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAACTGGCAGACCCTCCCTaGTGCCCTTTGAGGGTCACA +
Preference number: 3 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQLADPP*CPLRVT
Trigger: TGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAG...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR TCA 72 bp CTGCTCCACCAGCCCATACCACCTGTGTCTGCCCTCTaGGCCCCATCACAACGCCCAGGCAACAAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: LLHQPIPPVSAL*APSQRPGNKCR
Trigger: TCTGCACTTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGGTGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CAA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAAGGAGATAGCCAGCTTTaGGCAAGGGGCTCCCACAGT +
Preference number: 3 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQGDSQL*ARGSHS
Trigger: ACTGTGGGAGCCCCTTGCCAAAAGCTGGCTATCTCC...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp CCCTCCTCCCAGGGATGGATTCACTTAGGGATGCTATaGGAGGTGGAACTGAGGCACCCTGGCTGCCATCTG +
Preference number: 3 (lower is better)
Translates to: PSSQGWIHLGML*EVELRHPGCHL
Trigger: CAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAAGTGAATCCATCCCTGGGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp CCTGTGGCCCATGGAGGAGAGAAGCCATCCCTTCACTaGTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PVAHGGEKPSLH*FGHKTEGPSCS
Trigger: GGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAGGGATGGCTTCTCTCCTCCATGGGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CCA 72 bp GGCCCATGGAGGAGAGAAGCCATCCCTTCACTGCTTTaGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAG +
Preference number: 3 (lower is better)
Translates to: GPWRREAIPSLL*AQNRGPFLLHQ
Trigger: CTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAGGGATGGCTTCTCTCCTCCATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR TCA 72 bp GGCACTCTCAGACAGCTAGCTACATGTCACCAACTCTaGGAGACCGAAGCCTGGAGGATGCTCCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: GTLRQLATCHQL*ETEAWRMLLWP
Trigger: GGGCCACAGGAGCATCCTCCAGGCTTCGGTCTCTCAGAGTTGGTGACATGTAGCTAGCTGTCTGAGAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTaGTCCACCAGCCCATACCACCTGTGTCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: LHCFGHKTEGPS*STSPYHLCLPS
Trigger: AGAGGGCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp AGTAAGTCCCTTAGACAACTGGCAGACCCTCCCTTGTaGCCTTTGAGGGTCACAAGGCCACAGAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: SKSLRQLADPPL*PLRVTRPQRRQ
Trigger: CTGCCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CCA 72 bp GGAGGAGGAGAGGACTTGAGGGAGATAGCCAGCTTTTaGCAAGGGGCTCCCACAGTTGAAAGTCCCTTGACA +
Preference number: 3 (lower is better)
Translates to: GGGEDLREIASF*QGAPTVESPLT
Trigger: TGTCAAGGGACTTTCAACTGTGGGAGCCCCTTGCCAAAAGCTGGCTATCTCCCTCAAGTCCTCTCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp GTGCAGGACCGAAGAGTGTCTCAGCCTGAATTTGGCTaGCTCAATCCCTCCTCCCAGGGATGGATTCACTTA +
Preference number: 3 (lower is better)
Translates to: VQDRRVSQPEFG*LNPSSQGWIHL
Trigger: TAAGTGAATCCATCCCTGGGAGGAGGGATTGAGGCAGCCAAATTCAGGCTGAGACACTCTTCGGTCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR GCA 72 bp GTTGGCTGCGGACTGATTACAGTGTTCCCAGGCTCCTaGGCTTCGGGCATGGTTTTCTTCTACTTTTATTCT +
Preference number: 3 (lower is better)
Translates to: VGCGLITVFPGS*ASGMVFFYFYS
Trigger: AGAATAAAAGTAGAAGAAAACCATGCCCGAAGCGCAGGAGCCTGGGAACACTGTAATCAGTCCGCAGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CAA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAAGTGGGCCACATAGGTaGGCGGGGTACAGAGCACAC +
Preference number: 3 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQASGPHR*AGYRAH
Trigger: GTGTGCTCTGTACCCCGCCAACCTATGTGGCCCACT...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR TCA 72 bp GAGGTTCCTTTGATCACCTTCCCCGGCCCCTTTCAATaGACCCTTTCCATTCTGAGTGCCACTAAGAAAGTA +
Preference number: 3 (lower is better)
Translates to: EVPLITFPGPFQ*TLSILSATKKV
Trigger: TACTTTCTTAGTGGCACTCAGAATGGAAAGGGTTCATTGAAAGGGGCCGGGGAAGGTGATCAAAGGAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR-3UTR CAA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAGGAGGAGGAGAGGACTaGAGGGAGATAGCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQGGGED*REIASF
Trigger: AAAGCTGGCTATCTCCCTCAAGTCCTCTCCTCCTCC...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR TCA 72 bp TCTGTCGAGTTCAGGTGGGGCTCAGAAAGGAGTAATTaGAGAGACACACTAACAACAAAAACTGAACTGGCT +
Preference number: 3 (lower is better)
Translates to: SVEFRWGSERSN*RDTLTTKTELA
Trigger: AGCCAGTTCAGTTTTTGTTGTTAGTGTGTCTCTTCAATTACTCCTTTCTGAGCCCCACCTGAACTCGACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAAAACCACGCGCTCTCCTaGGCCAGGTGGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQNHALS*ARWGAC
Trigger: GCAGGCGCCCCACCTGGCGCAGGAGAGCGCGTGGTT...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACGGGCTCACCCCTGGTaGGCCCCCACTGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQRAHPW*APTVWS
Trigger: GCTCCAGACAGTGGGGGCGCACCAGGGGTGAGCCCG...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAATCTGCGAAGGGAGGCTaGCTGCCCAGGCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQSAKGG*LPRPPA
Trigger: AGCGGGCGGCCTGGGCAGCCAGCCTCCCTTCGCAGA...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCGTCCGGGAGGTTTCCTaGCCGCTGCGGGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCVREVS*PLRAEA
Trigger: GGCTTCGGCCCGCAGCGGCCAGGAAACCTCCCGGAC...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCTGCTGCTGCAGGGACTaGTGGTCCGGCCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCCCCRD*WSGPGC
Trigger: GCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCA...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTATGGACCAGGCCGCCCTaGCCCACGTCCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVWTRPP*PTSPGW
Trigger: CCATCCTGGGGACGTGGGCCAGGGCGGCCTGGTCCA...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGTCGCCGGGAGGGTGTaGACCCGGGAACCACGCGCT +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVVAGRV*TREPRA
Trigger: AGCGCGTGGTTCCCGGGTCCACACCCTCCCGGCGAC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAAGGCTGCATTAGCGGGTaGCTGGAGCCCACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQGCISG*LEPTAG
Trigger: GCCTGCAGTGGGCTCCAGGCACCCGCTAATGCAGCC...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAAGTGCCAGCCTCACCCTaGTGGGGCCGCGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEVPASP*WGRGSA
Trigger: TGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGGCAC...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGGCTGAGCCAGGAGCCTaGTGCTGCCCCGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLAEPGA*CCPGLT
Trigger: GGTGAGCCCGGGGCAGCAGCAGGCTCCTGGCTCAGC...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCAATGGAAAGCCCGGCTaGCCCCCGAGAGCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCNGKPG*PPRAGA
Trigger: CGCGCCAGCTCTCGGGGGCCAGCCGGGCTTTCCATT...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAAGGGTTGGGCGGTCCTaGGGCTTTGGAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVRVGRS*GFGATT
Trigger: GGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCT...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAAGCCCAGGCCGCCCGCTaGACCTCCGTAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEAQAAR*TSVAKQ
Trigger: CTGCTTGGCTACGGAGGTGCAGCGGGCGGCCTGGGC...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAAGCCAGGTGGGGCGCCTaGTGCTCAAAGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQARWGA*CSKPLR
Trigger: CCTGAGTGGCTTTGAGCAGCAGGCGCCCCACCTGGC...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACACGCCTGGAGCGCTGTaGGGAGTGGCCTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYTPGAL*GVACRL
Trigger: CAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGT...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAAAGCCCTCCGGCCCCTaGCTCTCCGCCATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVKPSGP*LSAMCS
Trigger: TGAGCACATGGCGGAGAGCCAGGGGCCGGAGGGCTT...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAACTGGTGCTGTCCCCCTaGATGGGAGGGTTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQLVLSP*MGGLGG
Trigger: ACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAG...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCGACCTGCTCCAGGCCTaGTGTGCCGGGATGTCCGGT +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCDLLQA*CAGMSG
Trigger: ACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTC...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAATGGGGTTCTGGGACTTaGCCTTCTCCCAGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQWGSGT*PSPRAP
Trigger: TGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCA...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCGCCAGAGCAGGGTCGTaGGGGCCGCAGTCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPARAGS*GPQSVG
Trigger: GCCGACTGACTGCGGCCCGCACGACCCTGCTCTGGC...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACTAGGCCAGCTAAGCTaGCCCCAAACTGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVLGQLS*PQTAAR
Trigger: CCGGGCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAAATCTCGTCAGGAGGCTaGGCACCGCTGCTGCTCGTT +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQISSGG*APLLLV
Trigger: AACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGAT...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAAGGTGGGTACGGAGGTaGGGGCCTTGGGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVRWVRR*GPWGHH
Trigger: ATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCT...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACGCCCGGTTAGGGCTCTaGTCCAGAGGCAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYARLGL*SRGRHG
Trigger: CCCGTGCCTGCCTCTGGACCAGAGCCCTAACCGGGC...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGCATTAGCGGGTGCCTaGAGCCCACTGCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVALAGA*SPLQAP
Trigger: TGGAGCCTGCAGTGGGCTCCAGGCACCCGCTAATGC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACGGTGTGAACTCGCCTaGGAGGCCTGGGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVRCELA*EAWVGR
Trigger: TCTGCCTACCCAGGCCTCCCAGGCGAGTTCACACCG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACCGCCGAAGAAGCCATaGACAGGCTGCGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEPPKKP*TGCACS
Trigger: GCTGCAGGCGCAGCCTGTGCATGGCTTCTTCGGCGG...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACCGGACCACCGAAGTTaGCCCCAAAGTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVPDHRS*PQSGGD
Trigger: ATCACCCCCACTTTGGGGGCAACTTCGGTGGTCCGG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCCCCCAGGGACAGGCTTaGCATCGTTACCCGACGTTG +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCPQGQA*HRYPTL
Trigger: CAACGTCGGGTAACGATGGCAAGCCTGTCCCTGGGG...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGAATCTACGGCTCCTTaGTTCGTCACCCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVESTAP*FVTLRG
Trigger: GCCCCGGAGGGTGACGAACCAAGGAGCCGTAGATTC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAACGCTCAAAGTTCGTCTaGGCCAAGCCGCCCACGGAA +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQRSKFV*AKPPTE
Trigger: TTCCGTGGGCGGCTTGGCCCAGACGAACTTTGAGCG...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAATGCTGTCCCCCTGGATaGGAGGGTTGGGCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGECCPPG*EGWAVL
Trigger: CAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCA...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGCAGCGTGCCGGCTGTTaGTCTGGGGCTCGAATTGGT +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLQRAGC*SGARIG
Trigger: ACCAATTCGAGCCCCAGATCAACAGCCGGCACGCTG...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCAGGATCTCCAGGGGATaGATCTCGTCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCRISRG*ISSGGC
Trigger: GCAGCCTCCTGACGAGATTCATCCCCTGGAGATCCT...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAGTGCTCATAACTCTCTaGGAAGGGAGGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATVLITL*EGRLAA
Trigger: GGCAGCCAGCCTCCCTTCGCAGAGAGTTATGAGCAC...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCAGGTGGGGCGCCTGCTaGTCAAAGCCACTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPRWGAC*SKPLRR
Trigger: GCGCCTGAGTGGCTTTGAGCAGCAGGCGCCCCACCT...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAACATGGCGCTCTTGACTaGTTCGGAGCAGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQHGALD*FGAAAT
Trigger: GGTAGCTGCTGCTCCGAAGCAGTCAAGAGCGCCATG...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACTTGCGCTGGCTGGGTTaGAAATCTGGCTGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYLRWLG*KSGCGG
Trigger: CCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAA...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGGGAGTTTCGGTGAGCTaGTCACCAGGGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLGVSVS*SPGDFG
Trigger: GCCGAAGTCCCCTGGTGACCAGCTCACCGAAACTCC...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 72 bp TCCCTTAGACAACTGGCAGACCCTCCCTTGTGCCCTTaGAGGGTCACAAGGCCACAGAGAAGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SLRQLADPPLCP*RVTRPQRRQRA
Trigger: CGCCCTCTGCCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCGGCGCATCGAAATGCTaGAGCCTCTGGTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPGASKC*SLWLGA
Trigger: GGCGCCCAACCAGAGGCTGCAGCATTTCGATGCGCC...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACATACCGTTATGCATGCTaGCATTCCACGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATYRYAC*HSTRRS
Trigger: GCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTA...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGGCCGCATTCTGGCGTTaGTGTTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLAAFWR*CCCCCC
Trigger: ACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGC...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGCTTACTGGCCGAGTTaGGCTGGCTGGGTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVAYWPS*AGWVGN
Trigger: ATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAGCAGGAGCCTTAAAGTaGGCGTTCATGCTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATAGALK*AFMLSP
Trigger: CGGACTGAGCATGAACGCCCACTTTAAGGCTCCTGC...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAGAGGTGCCCGAACTATaGAAGTCCGGGAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATEVPEL*KSGRFP
Trigger: AGGAAACCTCCCGGACTTCCATAGTTCGGGCACCTC...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACACTGAGCATGTTGACTaGGCAGCATGGGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYTEHVD*AAWGPR
Trigger: ACGGGGGCCCCATGCTGCCCAGTCAACATGCTCAGT...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACTGGCAATCATGTTCTaGCAAGCAGTGGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQLAIMF*QAVESA
Trigger: TGCGCTCTCCACTGCTTGCCAGAACATGATTGCCAG...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAATGCGCCCCCACTGTCTaGAGCTGTGGAATATTTGTC +
Preference number: 4 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQCAPTV*SCGIFV
Trigger: GACAAATATTCCACAGCTCCAGACAGTGGGGGCGCA...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCGCCATGAGGTCCGGCTaGTCCCCAAGGAGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPAMRSG*SPRRSS
Trigger: CGAGCTTCTCCTTGGGGACCAGCCGGACCTCATGGC...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTGTCTGCTTGAGCCCCAGGGGCTaGTCCTCCGAGATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: GTKQRALPAPPAHTTCVCLSPRG*SSEMLN
Trigger: ATTTAGCATCTCGGAGGACCAGCCCCTGGGGCTCAA...GCAGACACAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACTACTCATGGCGCTCTTaGCTGCTTCGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYYSWRS*LLRSSS
Trigger: GCTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTA...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAAAGAACACTCCGTGCTaGGGTTGCTGCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATKNTPC*GCCCCG
Trigger: TCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTT...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAAGGCTCAGAATATGGGTaGATGCTCCGGTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQGSEYG*MLRFSS
Trigger: GCTAGAGAACCGGAGCATGCACCCATATTCTGAGCC...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAATCCTCAGAGGCTCCTaGAAAGAGCCTCGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATILRGS*KEPRKS
Trigger: GCTTTTCCGAGGCTCTTTGCAGGAGCCTCTGAGGAT...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAATTGGAGATATCAGAGTaGAGAGACCGCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQLEISE*RDRQVG
Trigger: ACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAA...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGCTGGCTGTGCATTTTaGACAAACCCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVAGCAF*TNPPCL
Trigger: CAGGCATGGTGGGTTTGTCCAAAATGCACAGCCAGC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACATTGGTGGGGTGGTCATaGGCTTCTTTGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATLVGWS*ASLLLG
Trigger: CCCCAACAACAAAGAAGCCCATGACCACCCCACCAA...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGCTGAGGCCTTGTTGGTaGGGTGGTCATGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLLRPCW*GGHGLL
Trigger: AAGAAGCCCATGACCACCCCACCAACAAGGCCTCAG...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 72 bp TGGCCCATGGAGGAGAGAAGCCATCCCTTCACTGCTTaGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: WPMEERSHPFTA*GTKQRALPAPP
Trigger: TGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAGGGATGGCTTCTCTCCTCCATGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCCATGTCAAAATGTCCTaGGGGCGGCTCGCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPHVKMS*GRLARV
Trigger: TACCCGAGCGAGCCGCCCTCAGGACATTTTGACATG...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTAGCAGAGGGAGAGAGTTaGTTGTCTAGGGTACCGTTA +
Preference number: 4 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVAEGES*LSRVPL
Trigger: TAACGGTACCCTAGACAACCAACTCTCTCCCTCTGC...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAACCTCTTCCCCTCGGGTaGGTTCTTCTTGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQPLPLG*VLLVES
Trigger: ACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGG...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAATCACCATCTGTGCAGTaGACAGTCAGGCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGESPSVQ*TVRHCR
Trigger: CCTGCAGTGCCTGACTGTCCACTGCACAGATGGTGA...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 72 bp GCCAGTAAGTCCCTTAGACAACTGGCAGACCCTCCCTaGTGCCCTTTGAGGGTCACAAGGCCACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASKSLRQLADPP*CPLRVTRPQRR
Trigger: CCTTCTCTGTGGCCTTGTGACCCTCAAAGGGCACAAGGGAGGGTCTGCCAGTTGTCTAAGGGACTTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAAGGGGATGCTGCATGCTaGAGACAGGCTCAGAATATG +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEGDAAC*RQAQNM
Trigger: CATATTCTGAGCCTGTCTTCAGCATGCAGCATCCCC...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGCCTGCAGGCCGCCACTaGGTGTGCCAGCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGPAGRH*VCQPHP
Trigger: AGGGTGAGGCTGGCACACCCAGTGGCGGCCTGCAGG...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 72 bp GATCTGTGCAGGACCGAAGAGTGTCTCAGCCTGAATTaGGCTGCCTCAATCCCTCCTCCCAGGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: DLCRTEECLSLN*AASIPPPRDGF
Trigger: GAATCCATCCCTGGGAGGAGGGATTGAGGCAGCCAAATTCAGGCTGAGACACTCTTCGGTCCTGCACAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGTGCTGCTGCTGCTGCTaGAGGGACTGGTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGCCCCC*RDWWSG
Trigger: GCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCA...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGCTAAATTGTTGTCTCTaGAGCTGGATCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLLNCCL*SWIWAW
Trigger: CCAAGCCCAGATCCAGCTGCAGAGACAACAATTTAG...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACCGGCACAGGCGGTGTaGACTCGCCTGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLPAQAV*TRLGGL
Trigger: CAGGCCTCCCAGGCGAGTTCACACCGCCTGTGCCGG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCATAGCTGTCAGGGGTTaGGGTAGAGGTAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: YISSAISAPLHLGRSVSPIAVRG*GRGRQD
Trigger: ATCCTGTCTACCTCTACCTCAACCCCTGACAGCTAT...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCGGCCGCCACTGGGTGTaGCAGCCTCACCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSGRHWV*QPHPAG
Trigger: CCCAGCAGGGTGAGGCTGGCACACCCAGTGGCGGCC...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTCCAGCCTCACCCTGCTaGGGCCGCGGGAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFPASPC*GRGSAG
Trigger: TCCTGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGG...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTATGCTGCAGGGACTGGTaGTCCGGCCCCGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLCCRDW*SGPGCC
Trigger: GCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCA...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACATTCCAGGGTATAATTaGGGGAGAGACTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYIPGYN*GRDWCC
Trigger: ACAGCACCAGTCTCTCCCCCAATTATACCCTGGAAT...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGATGTCCCAAATCGGTTaGAGATATCAGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLMSQIG*RYQSAE
Trigger: CTCTGCACTCTGATATCTCCAACCGATTTGGGACAT...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTGCTTCCCCCAGCGGCTaGGCCAGGAGCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFASPSG*ARSLLL
Trigger: CAGCAGCAGGCTCCTGGCTCAGCCGCTGGGGGAAGC...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGAGGAGGGAGTTTCGGTaGGCTGGTCACCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGRREFR*AGHQGT
Trigger: AGTCCCCTGGTGACCAGCTCACCGAAACTCCCTCCT...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACGAAGGGAGGCTGGCTaGCCAGGCCGCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQRREAG*PGRPLH
Trigger: GTGCAGCGGGCGGCCTGGGCAGCCAGCCTCCCTTCG...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTAGCCCGGCACCTGCGCTaGCCCCTTCGCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLARHLR*PLRAQS
Trigger: ACTTTGAGCGCGAAGGGGGCAGCGCAGGTGCCGGGC...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACACTGTCTGGAGCTGTaGAATATTTGTCGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEHCLEL*NICRRR
Trigger: CCTTCTTCGACAAATATTCCACAGCTCCAGACAGTG...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATCGGAAAAGCACCCCTaGGCCACCTGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQASEKHP*ATWSRG
Trigger: CCCCCTGCTCCAGGTGGCTCAGGGGTGCTTTTCCGA...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCCCGTGCTGCGGTTGCTaGTGTTGTGGAGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSPCCGC*CCGGGW
Trigger: CCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGG...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAGTGCCTGGAGCCCACTaGAGGCTCCAGACCCACAGG +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAVPGAH*RLQTHR
Trigger: CCTGTGGGTCTGGAGCCTGCAGTGGGCTCCAGGCAC...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTTCCGGCCCCGGGTGCTaGAAGGGTGGTCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFSGPGC*KGGPEE
Trigger: TTCCTCGGGACCACCCTTGCAGCACCCGGGGCCGGA...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATGGACAGTCAGGCACTaGAGGTGGCTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAWTVRH*RWLPGW
Trigger: CCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCA...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACTCGCCTGGGAGGCCTaGGTAGGCAGAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLLAWEA*VGRGRE
Trigger: CTCTCTCCCTCTGCCTACCCAGGCCTCCCAGGCGAG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTAGTGCGCCCAGCTTACTaGCCGAGTTGCGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLVRPAY*PSCAGW
Trigger: CCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCAC...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGTGGCTGAGGCCTTGTTaGTGGGGTGGTCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGWLRPC*WGGHGL
Trigger: AAGCCCATGACCACCCCACCAACAAGGCCTCAGCCA...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTGGCTGCCGGGCTGGGTaGCTGAGGCCTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFGCRAG*LRPCWW
Trigger: CCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCC...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAGCAGCGGTCCACGCCTaGGCTGCCCGGAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAAAVHA*AARKVK
Trigger: TTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCTGC...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCGGCACCGGGCGACTaGAACTGGCCTAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQPAPGD*NWPRPA
Trigger: AGCTGGCCTAGGCCAGTTGCAGTCGCCCGGTGCCGG...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCACTGTGCGGAGTGGCCTaGCGGCTGCCTGAACCGAAT +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQALCGVA*RLPEPN
Trigger: ATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAG...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGGCGAACTCACCCACGTaGGGGGAACTACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGANSPT*GELPSD
Trigger: ATCAGATGGTAGTTCCCCGCACGTGGGTGAGTTCGC...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGGGTAGTGCTGTGTTCTaGCATCAGGGAGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGGSAVF*HQGVQV
Trigger: GACCTGGACTCCCTGATGGCAGAACACAGCACTACC...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCACGCAACCGCTGCTGCTaGTTCCGGGACGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQARNRCC*FRDAIC
Trigger: ACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCG...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAGCTGGGTTGGAAATCTaGCTGCGGCGGGTAAGCGCC +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAAGLEI*LRRVSA
Trigger: GGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGC...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAGCAGAGACCGCCAGGTaGGTACGGAGGTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQAETAR*VRRCGP
Trigger: AGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGC...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
3UTR CAA 72 bp AGCTTTTGGCAAGGGGCTCCCACAGTTGAAAGTCCCTaGACACAAACAATACGGGTATCTGGAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SFWQGAPTVESP*TQTIRVSGESQ
Trigger: TTGGCTCTCTCCAGATACCCGTATTGTTTGTGTCAAGGGACTTTCAACTGTGGGAGCCCCTTGCCAAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR TCA 90 bp TTAGCACACTCATCCCCAGCCTTAAGCACTGAAAACTGTCATTCTTGTTTGGGGGTTGTCAGAACTGGATaGCACTTCGTCCTCGTTCGC +
Preference number: 4 (lower is better)
Translates to: LAHSSPALSTENCHSCLGVVRTG*HFVLVR
Trigger: GCGAACGAGGACGAAGTGTCATCCAGTTCTGACAAC...CCCCAAACAAGAATGACAGTTTTCAGTGCTTAAGGCTGGGGATGAGTGTGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACACGTGGCCTTCTCCTaGCATCCTCAGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLHVAFS*HPQRLL
Trigger: CAGGAGCCTCTGAGGATGCCAGGAGAAGGCCACGTG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAAATTGGGGGAGAGACTaGTGCTGTCCCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQANWGRD*CCPPGW
Trigger: CCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATT...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATGGGGTGGCTGGCTGTaGATTTTGGACAAACCCACC +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAWGGWL*ILDKPT
Trigger: GGTGGGTTTGTCCAAAATGCACAGCCAGCCACCCCA...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTTGCCGGCTGTTGATCTaGGGCTCGAATTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFCRLLI*GSNWSS
Trigger: GCTGGACCAATTCGAGCCCCAGATCAACAGCCGGCA...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACAGGGCCTTGTCAGGTaGCATGTACCAGGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLQGLVR*HVPGSA
Trigger: AGCACTACCTGGTACATGCCACCTGACAAGGCCCTG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAGCAGCCAGGCAGCTCTaGCCGAACAGGTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQAARQL*PNRLSL
Trigger: TAAGGACAACCTGTTCGGCCAGAGCTGCCTGGCTGC...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCAGCCTTGTTGGTGGGGTaGTCATGGGCTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAALLVG*SWASLL
Trigger: CAACAAAGAAGCCCATGACCACCCCACCAACAAGGC...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR GCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAATTCTGGCGTTGCTGTTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQFWRCC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAA...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACAAAACGCGGCCTCTTaGCCACGTTCATGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQQNAAS*PRSCKG
Trigger: CCCCTTACATGAACGTGGCCAAGAGGCCGCGTTTTG...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTAAACTACCATCTGATTTaGCTGTGCTGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLNYHLI*LCCPGT
Trigger: CGTCCCTGGACAGCACAGCCAAATCAGATGGTAGTT...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CCA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTTCTCTAGCCGATGGATaGGATACTCGAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFSLADG*DTRTEH
Trigger: ATGCTCAGTTCGAGTATCCCATCCATCGGCTAGAGA...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CTGGCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGAGCTGCCGCTaGCCGCGCTCGGGGGCGAATTCACGCCTGGAGCGCTGTGCGGAG +
Preference number: 5 (lower is better)
Translates to: LAAAGKRPRQHRSCR*PRSGANSRLERCAE
Trigger: CTCCGCACAGCGCTCCAGGCGTGAATTCGCCCCCGAGCGCGGGCAGCGGCAGCTCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGACCCGGGAACCACGCGCTCTCCTGCGCCAGGTGGGGCGCCTGCTaGTCAAAGCCACTCAGGCGCCCGGCACCTGCGCTGCCCCCTTCG +
Preference number: 5 (lower is better)
Translates to: GPGNHALSCARWGAC*SKPLRRPAPALPPS
Trigger: CGAAGGGGGCAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGCAGGCGCCCCACCTGGCGCAGGAGAGCGCGTGGTTCCCGGGTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGAAATCTGGCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGAGCTaGCGCTGCCCGCGCTCGGGGGCGAATTCACGCCTGGAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GNLAAAGKRPRQHRS*RCPRSGANSRLERC
Trigger: ACAGCGCTCCAGGCGTGAATTCGCCCCCGAGCGCGGGCAGCGGCAGCTCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GGCAGGCACGGGGCAGGCACGGCGTGGCCCGAGGTGCCCGAACTATaGAAGTCCGGGAGGTTTCCTGGCCGCTGCGGGCCGAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GRHGAGTAWPEVPEL*KSGRFPGRCGPKPS
Trigger: GGAGGGCTTCGGCCCGCAGCGGCCAGGAAACCTCCCGGACTTCCATAGTTCGGGCACCTCGGGCCACGCCGTGCCTGCCCCGTGCCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGCGGAGTGGCCTGCCGGCTGCCTGAACCGAATGGAAAGCCCGGCTaGCCCCCGAGAGCTGGCGCGGGGAAGTCCGGAGGCGGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: CGVACRLPEPNGKPG*PPRAGAGKSGGGGR
Trigger: ACGGCCTCCGCCTCCGGACTTCCCCGCGCCAGCTCTCGGGGGCCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGGCCCCCGTCCTGCAGGCCGCCACTGGGTGTGCCAGCCTCACCCTaGTGGGGCCGCGGGAGCGCAGGAGGGCAAGAATTCTGTCGAACC +
Preference number: 5 (lower is better)
Translates to: GPPSCRPPLGVPASP*WGRGSAGGQEFCRT
Trigger: GGTTCGACAGAATTCTTGCCCTCCTGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGGCACACCCAGTGGCGGCCTGCAGGACGGGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGGGCGCCTGCTGCTCAAAGCCACTCAGGCGCCCGGCACCTGCGCTaGCCCCTTCGCGCTCAAAGTTCGTCTGGGCCAAGCCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: GAPAAQSHSGARHLR*PLRAQSSSGPSRPR
Trigger: CCGTGGGCGGCTTGGCCCAGACGAACTTTGAGCGCGAAGGGGGCAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGCAGGCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CTGCCGCTGCCCGCGCTCGGGGGCGAATTCACGCCTGGAGCGCTGTaGGGAGTGGCCTGCCGGCTGCCTGAACCGAATGGAAAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LPLPALGGEFTPGAL*GVACRLPEPNGKPG
Trigger: GCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCCCCCGAGCGCGGGCAGCGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TCGTCAGGAGGCTGCGCACCGCTGCTGCTCGTTGGGGTCCGGACCTaGTCCAGGCCTGGTGTGCCGGGATGTCCGGTGCCCACGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SSGGCAPLLLVGVRT*SRPGVPGCPVPTPP
Trigger: TGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GTCTGGGCCAAGCCGCCCACGGAACCTCCGTGGACCAGGCCGCCCTaGCCCACGTCCCCAGGATGGCCTAGCTGGGCCAGGTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: VWAKPPTEPPWTRPP*PTSPGWPSWARLGC
Trigger: ACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCCAGGGCGGCCTGGTCCACGGAGGTTCCGTGGGCGGCTTGGCCCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGCCCGCGCTCGGGGGCGAATTCACGCCTGGAGCGCTGTGCGGAGTaGCCTGCCGGCTGCCTGAACCGAATGGAAAGCCCGGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: CPRSGANSRLERCAE*PAGCLNRMESPAGP
Trigger: GGGGCCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCCCCCGAGCGCGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CAGGTGGGGCGCCTGCTGCTCAAAGCCACTCAGGCGCCCGGCACCTaGGCTGCCCCCTTCGCGCTCAAAGTTCGTCTGGGCCAAGCCGCC +
Preference number: 5 (lower is better)
Translates to: QVGRLLLKATQAPGT*AAPFALKVRLGQAA
Trigger: GGCGGCTTGGCCCAGACGAACTTTGAGCGCGAAGGGGGCAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGCAGGCGCCCCACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CCGGGCGACTGCAACTGGCCTAGGCCAGCTAAGCTGCCCCCAAACTaGAGCCCGGGCGAGGCCAGTGCGGGCACGTGGCCTTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PGDCNWPRPAKLPPN*SPGEASAGTWPSPG
Trigger: GCCAGGAGAAGGCCACGTGCCCGCACTGGCCTCGCCCGGGCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCAGTCGCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGGGCGAATTCACGCCTGGAGCGCTGTGCGGAGTGGCCTGCCGGCTaGCTGAACCGAATGGAAAGCCCGGCTGGCCCCCGAGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GANSRLERCAEWPAG*LNRMESPAGPRELA
Trigger: CGCCAGCTCTCGGGGGCCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GCGCTCGGGGGCGAATTCACGCCTGGAGCGCTGTGCGGAGTGGCCTaGCGGCTGCCTGAACCGAATGGAAAGCCCGGCTGGCCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: ALGGEFTPGALCGVA*RLPEPNGKPGWPPR
Trigger: TCTCGGGGGCCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCCCCCGAGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CACCGCTGCTGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTGGTGTaGCGGGATGTCCGGTGCCCACGCCCCCACCATAGCTGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: HRCCSLGSGPAPGLV*RDVRCPRPHHSCQG
Trigger: CCCCTGACAGCTATGGTGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp ACGGAACCTCCGTGGACCAGGCCGCCCTGGCCCACGTCCCCAGGATaGCCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TEPPWTRPPWPTSPG*PSWARLGCRNRCCW
Trigger: CCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCCAGGGCGGCCTGGTCCACGGAGGTTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CTGCGCACCGCTGCTGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTaGTGTGCCGGGATGTCCGGTGCCCACGCCCCCACCATAGCTGTC +
Preference number: 5 (lower is better)
Translates to: LRTAAARWGPDLLQA*CAGMSGAHAPTIAV
Trigger: GACAGCTATGGTGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGCTCTCCGCCATGTGCTCATAACTCTCTGCGAAGGGAGGCTGGCTaGCCAGGCCGCCCGCTGCACCTCCGTAGCCAAGCAGCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GSPPCAHNSLRREAG*PGRPLHLRSQAAGP
Trigger: GGGGCCGGCTGCTTGGCTACGGAGGTGCAGCGGGCGGCCTGGGCAGCCAGCCTCCCTTCGCAGAGAGTTATGAGCACATGGCGGAGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CCCGAGGTGCCCGAACTATGGAAGTCCGGGAGGTTTCCTGGCCGCTaGGGGCCGAAGCCCTCCGGCCCCTGGCTCTCCGCCATGTGCTCA +
Preference number: 5 (lower is better)
Translates to: PEVPELWKSGRFPGR*GPKPSGPWLSAMCS
Trigger: TGAGCACATGGCGGAGAGCCAGGGGCCGGAGGGCTTCGGCCCGCAGCGGCCAGGAAACCTCCCGGACTTCCATAGTTCGGGCACCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CCCCCGTCCTGCAGGCCGCCACTGGGTGTGCCAGCCTCACCCTGCTaGGGCCGCGGGAGCGCAGGAGGGCAAGAATTCTGTCGAACCAGA +
Preference number: 5 (lower is better)
Translates to: PPSCRPPLGVPASPC*GRGSAGGQEFCRTR
Trigger: TCTGGTTCGACAGAATTCTTGCCCTCCTGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGGCACACCCAGTGGCGGCCTGCAGGACGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GGCCGCCCTGGCCCACGTCCCCAGGATGGCCTAGCTGGGCCAGGTTaGGCTGTCGCAACCGCTGCTGCTGGTTCCGGGACGCCATCTGTT +
Preference number: 5 (lower is better)
Translates to: GRPGPRPQDGLAGPG*AVATAAAGSGTPSV
Trigger: AACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCCAGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGCGCCCAGCTTACTGGCCGAGTTGCGCTGGCTGGGTTGGAAATCTaGCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGAGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: CAQLTGRVALAGLEI*LRRVSAPASTGAAA
Trigger: AGCGGCAGCTCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGGTGCTGTCCCCCTGGATGGGAGGGTTGGGCGGTCCTGAGGCTTTaGAGCCACCACCACTGGTCCCGGAAGGGCCTCCGGGTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: WCCPPGWEGWAVLRL*SHHHWSRKGLRVQG
Trigger: CCCCTGGACCCGGAGGCCCTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 90 bp GCCCGCTGCACCTCCGTAGCCAAGCAGCCGGCCCCCGTGCAGACATaGGGCACCTGGATCCGGACCACCGAAGTTGCCCCCAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: ARCTSVAKQPAPVQT*GTWIRTTEVAPKVG
Trigger: CCCCACTTTGGGGGCAACTTCGGTGGTCCGGATCCAGGTGCCTCATGTCTGCACGGGGGCCGGCTGCTTGGCTACGGAGGTGCAGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GAAGCCCTCCGGCCCCTGGCTCTCCGCCATGTGCTCATAACTCTCTaGGAAGGGAGGCTGGCTGCCCAGGCCGCCCGCTGCACCTCCGTA +
Preference number: 5 (lower is better)
Translates to: EALRPLALRHVLITL*EGRLAAQAARCTSV
Trigger: TACGGAGGTGCAGCGGGCGGCCTGGGCAGCCAGCCTCCCTTCGCAGAGAGTTATGAGCACATGGCGGAGAGCCAGGGGCCGGAGGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTaGAAGGGTGGTCCCGAGGAAAAGCTGTCCGGCACAGGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCRDWWSGPGC*KGGPEEKLSGTGGV
Trigger: CACACCGCCTGTGCCGGACAGCTTTTCCTCGGGACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTaGTGCAAGGGTGGTCCCGAGGAAAAGCTGTCCGGCACAGGCGGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCRDWWSGPG*CKGGPEEKLSGTGG
Trigger: ACCGCCTGTGCCGGACAGCTTTTCCTCGGGACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CGCTCCGACGGAGCGTTTGGCAGTCCCACACCGGCACCGGGCGACTaGAACTGGCCTAGGCCAGCTAAGCTGCCCCCAAACTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RSDGAFGSPTPAPGD*NWPRPAKLPPNCSP
Trigger: CGGGCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCCGTCGGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp ACCGCCAGGTGGGTACGGAGGTGCGGGCCTTGGGGTCACCATCTGTaGAGTGGACAGTCAGGCACTGCAGGTGGCTGCCGGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TARWVRRCGPWGHHL*SGQSGTAGGCRAGW
Trigger: CCACCCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAGGGTaGTCCCGAGGAAAAGCTGTCCGGCACAGGCGGTGTGAACTCGCC +
Preference number: 5 (lower is better)
Translates to: LLLQGLVVRPRVLQG*SRGKAVRHRRCELA
Trigger: GGCGAGTTCACACCGCCTGTGCCGGACAGCTTTTCCTCGGGACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GACGGAGCGTTTGGCAGTCCCACACCGGCACCGGGCGACTGCAACTaGCCTAGGCCAGCTAAGCTGCCCCCAAACTGCAGCCCGGGCGAG +
Preference number: 5 (lower is better)
Translates to: DGAFGSPTPAPGDCN*PRPAKLPPNCSPGE
Trigger: CTCGCCCGGGCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGAGGATCTCCAGGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTaGTGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GGSPGDESRQEAAHR*CSLGSGPAPGLVCR
Trigger: CCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCCTGGAGATCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp AAGCTGCCCCCAAACTGCAGCCCGGGCGAGGCCAGTGCGGGCACGTaGCCTTCTCCTGGCATCCTCAGAGGCTCCTGCAAAGAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: KLPPNCSPGEASAGT*PSPGILRGSCKEPR
Trigger: CCGAGGCTCTTTGCAGGAGCCTCTGAGGATGCCAGGAGAAGGCCACGTGCCCGCACTGGCCTCGCCCGGGCTGCAGTTTGGGGGCAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp ACCCCAACGACAGTGCGCCCAGCTTACTGGCCGAGTTGCGCTGGCTaGGTTGGAAATCTGGCTGCGGCGGGTAAGCGCCCCCGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: TPTTVRPAYWPSCAG*VGNLAAAGKRPRQH
Trigger: GTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CAGGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTGCTGCTCGTTaGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGGGATGTCCGGT +
Preference number: 5 (lower is better)
Translates to: QGMNLVRRLRTAAAR*GPDLLQAWCAGMSG
Trigger: ACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGATCTCCAGGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTGCTaGTCGTTGGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: GSPGDESRQEAAHRC*SLGSGPAPGLVCRD
Trigger: ATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCCTGGAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CTCCATGTTCAAGCCCAAGATCGGGGGTTCGCCCAGAGCGCTTATTaGAGGGTCCACGGGGCCAGTAGGAGGCCCGGCGTGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LHVQAQDRGFAQSAY*RVHGASRRPGVEGR
Trigger: CCTGCCTTCCACGCCGGGCCTCCTACTGGCCCCGTGGACCCTGCAATAAGCGCTCTGGGCGAACCCCCGATCTTGGGCTTGAACATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGCATCTTTCGGGCCCCGCCAAACCTCTCGAAGAACACTCCGTGCTaGGGTTGCTGCTGTTGTGGAGGCGGCTGGGGTGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GIFRAPPNLSKNTPC*GCCCCGGGWGGWLC
Trigger: GCACAGCCAGCCACCCCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTTCGAGAGGTTTGGCGGGGCCCGAAAGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGCTGCTGCTaGAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAGGGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*RDWWSGPGCCKGGP
Trigger: GGGACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGGGGTCACCATCTGTGCAGTGGACAGTCAGGCACTGCAGGTGGCTaGCGGGCTGGGTGGCTGAGGCCTTGTTGGTGGGGTGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: WGHHLCSGQSGTAGG*RAGWLRPCWWGGHG
Trigger: CCCATGACCACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCACTGCACAGATGGTGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp AAACTGCAGCCCGGGCGAGGCCAGTGCGGGCACGTGGCCTTCTCCTaGCATCCTCAGAGGCTCCTGCAAAGAGCCTCGGAAAAGCACCCC +
Preference number: 5 (lower is better)
Translates to: KLQPGRGQCGHVAFS*HPQRLLQRASEKHP
Trigger: GGGGTGCTTTTCCGAGGCTCTTTGCAGGAGCCTCTGAGGATGCCAGGAGAAGGCCACGTGCCCGCACTGGCCTCGCCCGGGCTGCAGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 90 bp GCAGTGGACAGTCAGGCACTGCAGGTGGCTGCCGGGCTGGGTGGCTaGGGCCTTGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: AVDSQALQVAAGLGG*GLVGGVVMGFFVVG
Trigger: CCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGTAGGCAGAGGGAGAGAGTTGGTTGTCTAGGGTACCGTTATGCATaGTGCCATTCCACGAGGCGCAGCGGTCCACGCCTGCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GRQRERVGCLGYRYA*CHSTRRSGPRLRCP
Trigger: CGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTACCCTAGACAACCAACTCTCTCCCTCTGCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGCTGCTaGTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CRDWWSGPGCCKGG
Trigger: ACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTaGTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCRDWWSGPGCCK
Trigger: CTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTaGTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCRDWWSGPGCC
Trigger: GCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTaGTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCRDWWSGPGC
Trigger: GCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTaGTGCTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCRDWWSGPG
Trigger: CCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TCCCCAGGATGGCCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTaGTGCTGGTTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: SPGWPSWARLGCRNR*CWFRDAICLIMRAA
Trigger: TGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp AGGAGTAGTCCCTCCGGGGAAGTAATCCGAGCCCGGGTTACCGGCTaGAACCGCGCTGTCGGGCTCGTTCTGGCTCAGTTTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RSSPSGEVIRARVTG*NRAVGLVLAQFPLP
Trigger: GGGAAGAGGAAACTGAGCCAGAACGAGCCCGACAGCGCGGTTGCAGCCGGTAACCCGGGCTCGGATTACTTCCCCGGAGGGACTACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp AGAGCGCTTATTGCAGGGTCCACGGGGCCAGTAGGAGGCCCGGCGTaGAAGGCAGGAGCCTTAAAGTGGGCGTTCATGCTCAGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: RALIAGSTGPVGGPA*KAGALKWAFMLSPA
Trigger: AGCCGGACTGAGCATGAACGCCCACTTTAAGGCTCCTGCCTTCCACGCCGGGCCTCCTACTGGCCCCGTGGACCCTGCAATAAGCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GGTTCTCTAGCCGATGGATGGGATACTCGAACTGAGCATGTTGACTaGGCAGCATGGGGCCCCCGTCCTGCAGGCCGCCACTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GSLADGWDTRTEHVD*AAWGPRPAGRHWVC
Trigger: GCACACCCAGTGGCGGCCTGCAGGACGGGGGCCCCATGCTGCCCAGTCAACATGCTCAGTTCGAGTATCCCATCCATCGGCTAGAGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TATCAGAGTGCAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCCTTaGGGTCACCATCTGTGCAGTGGACAGTCAGGCACTGCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: YQSAETARWVRRCGP*GHHLCSGQSGTAGG
Trigger: GCCACCTGCAGTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACACACTCCGTGCTGCGGTaGCTGCTGTTGTGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATHSVLR*LLLWRR
Trigger: CCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTG...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp ACCGTTATGCATGCTGCCATTCCACGAGGCGCAGCGGTCCACGCCTaGGCTGCCCGGAAAGTCAAAACGCGGCCTCTTGGCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: TVMHAAIPRGAAVHA*AARKVKTRPLGHVH
Trigger: ATGAACGTGGCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp AGGCAGAGGGAGAGAGTTGGTTGTCTAGGGTACCGTTATGCATGCTaGCATTCCACGAGGCGCAGCGGTCCACGCCTGCGCTGCCCGGAA +
Preference number: 5 (lower is better)
Translates to: RQRERVGCLGYRYAC*HSTRRSGPRLRCPE
Trigger: TTCCGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTACCCTAGACAACCAACTCTCTCCCTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CCAGGATGGCCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTGCTaGTGGTTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCATTC +
Preference number: 5 (lower is better)
Translates to: PGWPSWARLGCRNRC*WFRDAICLIMRAAF
Trigger: GAATGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp AGCGGTCCACGCCTGCGCTGCCCGGAAAGTCAAAACGCGGCCTCTTaGCCACGTTCATGTAAGGGGGCGCATCGAAATGCTGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SGPRLRCPESQNAAS*PRSCKGAHRNAAAS
Trigger: AGAGGCTGCAGCATTTCGATGCGCCCCCTTACATGAACGTGGCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GGATGGCCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTGCTGCTaGTTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCATTCTGG +
Preference number: 5 (lower is better)
Translates to: GWPSWARLGCRNRCC*FRDAICLIMRAAFW
Trigger: CCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TATAATTGGGGGAGAGACTGGTGCTGTCCCCCTGGATGGGAGGGTTaGGCGGTCCTGAGGCTTTGGAGCCACCACCACTGGTCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: YNWGRDWCCPPGWEG*AVLRLWSHHHWSRK
Trigger: CTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACACCGCTGCTGCTCGTaGGGGTCCGGACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEHRCCS*GSGPAP
Trigger: TGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTG...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 90 bp TGGGCGTTCATGCTCAGTCCGGCTTCGTTAAAGTTCCCCTCGCCCTaGCCAGCGTGCCGGCTGTTGATCTGGGGCTCGAATTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WAFMLSPASLKFPSP*PACRLLIWGSNWSS
Trigger: GCTGGACCAATTCGAGCCCCAGATCAACAGCCGGCACGCTGGTCAGGGCGAGGGGAACTTTAACGAAGCCGGACTGAGCATGAACGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 90 bp CACCTCATCAGAGGCGAACTCACCCACGTGCGGGGAACTACCATCTaGTTTGGCTGTGCTGTCCAGGGACGCCATGAGGTCCGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: HLIRGELTHVRGTTI*FGCAVQGRHEVRLV
Trigger: GACCAGCCGGACCTCATGGCGTCCCTGGACAGCACAGCCAAATCAGATGGTAGTTCCCCGCACGTGGGTGAGTTCGCCTCTGATGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TATGCATGCTGCCATTCCACGAGGCGCAGCGGTCCACGCCTGCGCTaGCCGGAAAGTCAAAACGCGGCCTCTTGGCCACGTTCATGTAAG +
Preference number: 5 (lower is better)
Translates to: YACCHSTRRSGPRLR*PESQNAASWPRSCK
Trigger: CTTACATGAACGTGGCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GGTTGGAGATATCAGAGTGCAGAGACCGCCAGGTGGGTACGGAGGTaGGGGCCTTGGGGTCACCATCTGTGCAGTGGACAGTCAGGCACT +
Preference number: 5 (lower is better)
Translates to: GWRYQSAETARWVRR*GPWGHHLCSGQSGT
Trigger: AGTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GTCAGGGCGGCCACAAATGTCCCAAATCGGTTGGAGATATCAGAGTaGAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCCTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: VRAATNVPNRLEISE*RDRQVGTEVRALGS
Trigger: TGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAACCGATTTGGGACATTTGTGGCCGCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp ATTCCAGGGTATAATTGGGGGAGAGACTGGTGCTGTCCCCCTGGATaGGAGGGTTGGGCGGTCCTGAGGCTTTGGAGCCACCACCACTGG +
Preference number: 5 (lower is better)
Translates to: IPGYNWGRDWCCPPG*EGWAVLRLWSHHHW
Trigger: CCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATACCCTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAAGTACTCATGGCGCTCTaGACTGCTTCGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQVLMAL*TASEQQ
Trigger: CTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTAC...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GCCAAACCTCTCGAAGAACACTCCGTGCTGCGGTTGCTGCTGTTGTaGAGGCGGCTGGGGTGGCTGGCTGTGCATTTTGGACAAACCCAC +
Preference number: 5 (lower is better)
Translates to: AKPLEEHSVLRLLLL*RRLGWLAVHFGQTH
Trigger: GTGGGTTTGTCCAAAATGCACAGCCAGCCACCCCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTTCGAGAGGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GGACAGGCTTGCCATCGTTACCCGACGTTGATTCCAGGGTATAATTaGGGGAGAGACTGGTGCTGTCCCCCTGGATGGGAGGGTTGGGCG +
Preference number: 5 (lower is better)
Translates to: GQACHRYPTLIPGYN*GRDWCCPPGWEGWA
Trigger: CGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGGGTAACGATGGCAAGCCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGGCTGAGGCCTTGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTTaGGGTTCTGGGACTTGGCCTTCTCCCAGGGCGCCAGCGTCTTGT +
Preference number: 5 (lower is better)
Translates to: WLRPCWWGGHGLLCC*GSGTWPSPRAPASC
Trigger: ACAAGACGCTGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGCCTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCGTTGCGCTGGCTGGGTaGGAAATCTGGCTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: YISSAISAPLHLGRSVSPVALAG*EIWLRR
Trigger: CCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAAC...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp GCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAACAAAGCTTACTGGCCGAGTaGCGCTGGCTGGGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: AHTTCVCPLSPITTPRQQSLLAE*RWLGWK
Trigger: TTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCT...TTGTTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACACTCTGGCCGAACAGGTaGTCCTTAGAGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATLWPNR*SLELGL
Trigger: CAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAG...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp AAAGTCACGTTGAGGTTAGGAGCACCCAGGCTGGCAATCATGTTCTaGCAAGCAGTGGAGAGCGCAGCCAGGCAGCTCTGGCCGAACAGG +
Preference number: 5 (lower is better)
Translates to: KVTLRLGAPRLAIMF*QAVESAARQLWPNR
Trigger: CCTGTTCGGCCAGAGCTGCCTGGCTGCGCTCTCCACTGCTTGCCAGAACATGATTGCCAGCCTGGGTGCTCCTAACCTCAACGTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CATCGTTACCCGACGTTGATTCCAGGGTATAATTGGGGGAGAGACTaGTGCTGTCCCCCTGGATGGGAGGGTTGGGCGGTCCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: HRYPTLIPGYNWGRD*CCPPGWEGWAVLRL
Trigger: AAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGGGTAACGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGGTGGGGTGGTCATGGGCTTCTTTGTTGTTGGGGTTCTGGGACTTaGCCTTCTCCCAGGGCGCCAGCGTCTTGTCCTCATCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: WWGGHGLLCCWGSGT*PSPRAPASCPHLHH
Trigger: ATGGTGGAGATGAGGACAAGACGCTGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp ATGTCCCAAATCGGTTGGAGATATCAGAGTGCAGAGACCGCCAGGTaGGTACGGAGGTGCGGGCCTTGGGGTCACCATCTGTGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: MSQIGWRYQSAETAR*VRRCGPWGHHLCSG
Trigger: TCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAACCGATTTGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCGGAATCTACGGCTCCTaGGTTCGTCACCCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: YISSAISAPLHLGRSVSPGIYGS*VRHPPG
Trigger: CCCCGGAGGGTGACGAACCAAGGAGCCGTAGATTCC...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AGGCGCCTCCAGCTGCTCCATGTCACCAGTCGACACTGGCATGACCCTGCTACAGGCTGGCTGTGCATTTaGGACAAACCCACCATGCCT +
Preference number: 5 (lower is better)
Translates to: RRLQLLHVTSRHWHDPATGWLCI*DKPTMP
Trigger: AGGCATGGTGGGTTTGTCCAAAATGCACAGCCAGCC...TGTAGCAGGGTCATGCCAGTGTCGACTGGTGACATGGAGCAGCTGGAGGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CAGGTTGTCCTTAGAGCTGGGCTTGTTGAAAGACCCCAACGACAGTaGGCCCAGCTTACTGGCCGAGTTGCGCTGGCTGGGTTGGAAATC +
Preference number: 5 (lower is better)
Translates to: QVVLRAGLVERPQRQ*AQLTGRVALAGLEI
Trigger: GATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGCCATCAGGGAGTCCAGGTCGATAGTACTCATGGCGCTCTTGACTaGTTCGGAGCAGCAGCTACCCAACTCGCTGTCACCGTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: CHQGVQVDSTHGALD*FGAAATQLAVTVLC
Trigger: GCACAGAACGGTGACAGCGAGTTGGGTAGCTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTACTATCGACCTGGACTCCCTGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CAGGCTCAGAATATGGGTGCATGCTCCGGTTCTCTAGCCGATGGATaGGATACTCGAACTGAGCATGTTGACTGGGCAGCATGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QAQNMGACSGSLADG*DTRTEHVDWAAWGP
Trigger: GGGGCCCCATGCTGCCCAGTCAACATGCTCAGTTCGAGTATCCCATCCATCGGCTAGAGAACCGGAGCATGCACCCATATTCTGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp GCAATCATGTTCTGGCAAGCAGTGGAGAGCGCAGCCAGGCAGCTCTaGCCGAACAGGTTGTCCTTAGAGCTGGGCTTGTTGAAAGACCCC +
Preference number: 5 (lower is better)
Translates to: AIMFWQAVESAARQL*PNRLSLELGLLKDP
Trigger: GGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAGCTGCCTGGCTGCGCTCTCCACTGCTTGCCAGAACATGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CGCGCTGTCGGGCTCGTTCTGGCTCAGTTTCCTCTTCCCCTCGGGTaGGTTCTTCTTGTTGAAAGTCACGTTGAGGTTAGGAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: RAVGLVLAQFPLPLG*VLLVESHVEVRSTQ
Trigger: CTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACTGAGCCAGAACGAGCCCGACAGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp CAGCGTCTTGTCCTCATCTCCACCATCCACCAGGGCCTTGTCAGGTaGCATGTACCAGGTAGTGCTGTGTTCTGCCATCAGGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QRLVLISTIHQGLVR*HVPGSAVFCHQGVQ
Trigger: CTGGACTCCCTGATGGCAGAACACAGCACTACCTGGTACATGCCACCTGACAAGGCCCTGGTGGATGGTGGAGATGAGGACAAGACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp CACCAGGGCCTTGTCAGGTGGCATGTACCAGGTAGTGCTGTGTTCTaGCATCAGGGAGTCCAGGTCGATAGTACTCATGGCGCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: HQGLVRWHVPGSAVF*HQGVQVDSTHGALD
Trigger: GTCAAGAGCGCCATGAGTACTATCGACCTGGACTCCCTGATGGCAGAACACAGCACTACCTGGTACATGCCACCTGACAAGGCCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TTAGGGATGCTATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAATGGGCTTCTTTGTTGTaGGGGTTCTGGGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LGMLCEVELRHPGCHLGEWASLL*GFWDLA
Trigger: GGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCA...TTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCATAGCATCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GACGCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTTaGTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DAICLIMRAAFWRCC*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTaGTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FRDAICLIMRAAFWR*CCCCCCCCCCCCCC
Trigger: GCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 90 bp TGCTGGTTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCATTCTaGCGTTGCTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: CWFRDAICLIMRAAF*RCCCCCCCCCCCCC
Trigger: GCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAACCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp CCAGCCCATACCACCTGTGTCTGCCCTCTGAGCCCCATCACAACGCCCAGGCAAGGTGGGTTCTTCTTGTaGAAAGTCACGTTGAGGTTA +
Preference number: 5 (lower is better)
Translates to: PAHTTCVCPLSPITTPRQGGFFL*KVTLRL
Trigger: TAACCTCAACGTGACTTTCAACAAGAAGAACCCACC...TTGCCTGGGCGTTGTGATGGGGCTCAGAGGGCAGACACAGGTGGTATGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACCACCTGTCGGGTGGGTTCTTCTaGTTGAAAGTCACGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CFGHKTEGPSCSTSPYHLSGGFF*LKVTLR
Trigger: CCTCAACGTGACTTTCAACAAGAAGAACCCACCCGA...CAGGTGGTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp ATGCGAGGTGGAACTGAGGCACCCTGGCTGCCATCTGGGAGAACAGGGCCAGTACGAGATGCTAAATTGTaGTCTCTGCAGCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: MRGGTEAPWLPSGRTGPVRDAKL*SLQLDL
Trigger: CAGATCCAGCTGCAGAGACAACAATTTAGCATCTCG...TACTGGCCCTGTTCTCCCAGATGGCAGCCAGGGTGCCTCAGTTCCACCTCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp GCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTTGCTaGTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: AICLIMRAAFWRCCC*CCCCCCCCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp CTTCACTGCTTTGGGCACAAAACAGAGGGCCCTTCCTGCTCCACCAGCCCATACTTAGAGCTGGGCTTGTaGAAAGACCCCAACGACAGT +
Preference number: 5 (lower is better)
Translates to: LHCFGHKTEGPSCSTSPYLELGL*KDPNDS
Trigger: ACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAA...GTATGGGCTGGTGGAGCAGGAAGGGCCCTCTGTTTTGTGCCCAAAGCAGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TACATCAGCTCAGCAATCTCTGCTCCCCTCCACTTAGGCAGAAGCGTCTCTCCCTGGTCATGGGCTTCTTaGTTGTTGGGGTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: YISSAISAPLHLGRSVSPWSWAS*LLGFWD
Trigger: GTCCCAGAACCCCAACAACAAAGAAGCCCATGACCA...GGGAGAGACGCTTCTGCCTAAGTGGAGGGGAGCAGAGATTGCTGAGCTGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp TGTTGTCAGAACTGGATGACACTTCGTCCTCGTTCGCATAACTTGTaGTCACCTCATCAGAGGCGAACTCACCCACGTGCGGGGAACTAC +
Preference number: 5 (lower is better)
Translates to: CCQNWMTLRPRSHNL*SPHQRRTHPRAGNY
Trigger: GTAGTTCCCCGCACGTGGGTGAGTTCGCCTCTGATGAGGTGAGCACAAGTTATGCGAACGAGGACGAAGTGTCATCCAGTTCTGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 90 bp ACTTCGGCTGGCTTTGGCCAGGGCTGTAGTGTTGTCAGAACTGGATaGCACTTCGTCCTCGTTCGCATAACTTGTGCTCACCTCATCAGA +
Preference number: 5 (lower is better)
Translates to: TSAGFGQGCSVVRTG*HFVLVRITCAHLIR
Trigger: TCTGATGAGGTGAGCACAAGTTATGCGAACGAGGACGAAGTGTCATCCAGTTCTGACAACACTACAGCCCTGGCCAAAGCCAGCCGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 90 bp ATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTTGCTGCTaGTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ICLIMRAAFWRCCCC*CCCCCCCCCCCCCC
Trigger: ACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCACGCCCAGAGCGCTTATaGCAGGGTCCACGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQARPERL*QGPRGQ
Trigger: CTGGCCCCGTGGACCCTGCAATAAGCGCTCTGGGCG...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCCCAGCGTGCCGGCTGTaGATCTGGGGCTCGAATTGG +
Preference number: 5 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSPACRL*IWGSNW
Trigger: CCAATTCGAGCCCCAGATCAACAGCCGGCACGCTGG...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTCCCTGGATGGGAGGGTaGGGCGGTCCTGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFPWMGG*GGPEAL
Trigger: CAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGG...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATGGGTGGCTGAGGCCTaGTTGGTGGGGTGGTCATGG +
Preference number: 5 (lower is better)
Translates to: KIPLSFMSYCQSLSSNQAWVAEA*LVGWSW
Trigger: CCATGACCACCCCACCAACAAGGCCTCAGCCACCCA...TGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAGGCGGTCCTGAGGCTTaGGAGCCACCACCACTGGTC +
Preference number: 5 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQGGPEA*EPPPLV
Trigger: GACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCC...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCCCATCCACCAGGGCCTaGTCAGGTGGCATGTACCAG +
Preference number: 5 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSPSTRA*SGGMYQ
Trigger: CTGGTACATGCCACCTGACAAGGCCCTGGTGGATGG...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTCTCGAACTGAGCATGTaGACTGGGCAGCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFLELSM*TGQHGA
Trigger: GGCCCCATGCTGCCCAGTCAACATGCTCAGTTCGAG...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AGAAAGAAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAAGGACTTCGGCTGGCTTaGGCCAGGGCTGTAGTGTTG +
Preference number: 5 (lower is better)
Translates to: RKKNTTQFHELLSVTVFQGLRLA*ARAVVL
Trigger: CAACACTACAGCCCTGGCCAAAGCCAGCCGAAGTCC...TTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp AAAAATACCACTCAGTTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCGAGGGAGAGAGTTGGTaGTCTAGGGTACCGTTATGC +
Preference number: 5 (lower is better)
Translates to: KNTTQFHELLSVTVFQPSEGESW*SRVPLC
Trigger: GCATAACGGTACCCTAGACAACCAACTCTCTCCCTC...GCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAACTGAGTGGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACATCGTTACCCGACGTaGATTCCAGGGTATAATTGG +
Preference number: 5 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLHRYPT*IPGYNW
Trigger: CCAATTATACCCTGGAATCAACGTCGGGTAACGATG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp CGCAGGGTTAAGGGTTCATATTATACATGTGCAATAGCGATTTCCTTCTCTCTACTCCGAGATGCTAAATaGTTGTCTCTGCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: RRVKGSYYTCAIAISFSLLRDAK*LSLQLD
Trigger: ATCCAGCTGCAGAGACAACAATTTAGCATCTCGGAG...TAGAGAGAAGGAAATCGCTATTGCACATGTATAATATGAACCCTTAACCCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS-3UTR CAA 90 bp TTTCATGAGCTATTGTCAGTCACTGTCTTCCAACCAAGCATTCAGAAATGGTTTAATGTCCCAAATCGGTaGGAGATATCAGAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: FHELLSVTVFQPSIQKWFNVPNR*EISECR
Trigger: TCTGCACTCTGATATCTCCAACCGATTTGGGACATT...AAACCATTTCTGAATGCTTGGTTGGAAGACAGTGACTGACAATAGCTCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCGGGTAAGCGCCCCCGCCAGCACCGGAGCTGCCGCTaGCCGCGCTCGGGGGCGAATTCACGCCTGGAGCGC +
Preference number: 6 (lower is better)
Translates to: AGKRPRQHRSCR*PRSGANSRLER
Trigger: GCGCTCCAGGCGTGAATTCGCCCCCGAGCGCGGGCAGCGGCAGCTCCGGTGCTGGCGGGGGCGCTTACCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGAGCTaGCGCTGCCCGCGCTCGGGGGCGAATTCACGCCTG +
Preference number: 6 (lower is better)
Translates to: AAAGKRPRQHRS*RCPRSGANSRL
Trigger: CAGGCGTGAATTCGCCCCCGAGCGCGGGCAGCGGCAGCTCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGCTGCGCACCGCTGCTGCTCGTTGGGGTCCGGACCTaGTCCAGGCCTGGTGTGCCGGGATGTCCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: GCAPLLLVGVRT*SRPGVPGCPVP
Trigger: GGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGGGCAGGCACGGCGTGGCCCGAGGTGCCCGAACTATaGAAGTCCGGGAGGTTTCCTGGCCGCTGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: GAGTAWPEVPEL*KSGRFPGRCGP
Trigger: CGGCCCGCAGCGGCCAGGAAACCTCCCGGACTTCCATAGTTCGGGCACCTCGGGCCACGCCGTGCCTGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp AAGCCGCCCACGGAACCTCCGTGGACCAGGCCGCCCTaGCCCACGTCCCCAGGATGGCCTAGCTGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KPPTEPPWTRPP*PTSPGWPSWAR
Trigger: CCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCCAGGGCGGCCTGGTCCACGGAGGTTCCGTGGGCGGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GCCTGCCGGCTGCCTGAACCGAATGGAAAGCCCGGCTaGCCCCCGAGAGCTGGCGCGGGGAAGTCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: ACRLPEPNGKPG*PPRAGAGKSGG
Trigger: GCCTCCGGACTTCCCCGCGCCAGCTCTCGGGGGCCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GCTGCTGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTaGTGTGCCGGGATGTCCGGTGCCCACGCCCCCACC +
Preference number: 6 (lower is better)
Translates to: AAARWGPDLLQA*CAGMSGAHAPT
Trigger: GGTGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GCGCGGGGAAGTCCGGAGGCGGAGGCCGTCGCTCCGACGGAGCGTTaGGCAGTCCCACACCGGCACCGGGCGACTGCAACTGGCCTAGGC +
Preference number: 6 (lower is better)
Translates to: ARGSPEAEAVAPTER*AVPHRHRATATGLG
Trigger: GCCTAGGCCAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCCGTCGGAGCGACGGCCTCCGCCTCCGGACTTCCCCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCCGAACTATGGAAGTCCGGGAGGTTTCCTGGCCGCTaGGGGCCGAAGCCCTCCGGCCCCTGGCTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PELWKSGRFPGR*GPKPSGPWLSA
Trigger: GGCGGAGAGCCAGGGGCCGGAGGGCTTCGGCCCGCAGCGGCCAGGAAACCTCCCGGACTTCCATAGTTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp AACCACGCGCTCTCCTGCGCCAGGTGGGGCGCCTGCTaGTCAAAGCCACTCAGGCGCCCGGCACCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: NHALSCARWGAC*SKPLRRPAPAL
Trigger: CAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGCAGGCGCCCCACCTGGCGCAGGAGAGCGCGTGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GTCCGGAGGCGGAGGCCGTCGCTCCGACGGAGCGTTTaGCAGTCCCACACCGGCACCGGGCGACTGCAACTG +
Preference number: 6 (lower is better)
Translates to: VRRRRPSLRRSV*QSHTGTGRLQL
Trigger: CAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCCGTCGGAGCGACGGCCTCCGCCTCCGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGTTGGGCGGTCCTGAGGCTTTGGAGCCACCACCACTaGTCCCGGAAGGGCCTCCGGGTCCAGGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GWAVLRLWSHHH*SRKGLRVQGPQ
Trigger: CTGGGGCCCCTGGACCCGGAGGCCCTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TCCTGCAGGCCGCCACTGGGTGTGCCAGCCTCACCCTaGTGGGGCCGCGGGAGCGCAGGAGGGCAAGAATTC +
Preference number: 6 (lower is better)
Translates to: SCRPPLGVPASP*WGRGSAGGQEF
Trigger: GAATTCTTGCCCTCCTGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGGCACACCCAGTGGCGGCCTGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTGGTGTaGCGGGATGTCCGGTGCCCACGCCCCCACCATAGC +
Preference number: 6 (lower is better)
Translates to: CSLGSGPAPGLV*RDVRCPRPHHS
Trigger: GCTATGGTGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGCCCACGTCCCCAGGATGGCCTAGCTGGGCCAGGTTaGGCTGTCGCAACCGCTGCTGCTGGTTCCGGGACG +
Preference number: 6 (lower is better)
Translates to: GPRPQDGLAGPG*AVATAAAGSGT
Trigger: CGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CCCCCTGGATGGGAGGGTTGGGCGGTCCTGAGGCTTTaGAGCCACCACCACTGGTCCCGGAAGGGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: PPGWEGWAVLRL*SHHHWSRKGLR
Trigger: CCGGAGGCCCTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp AGTCCGGAGGCGGAGGCCGTCGCTCCGACGGAGCGTTaGGCAGTCCCACACCGGCACCGGGCGACTGCAACT +
Preference number: 6 (lower is better)
Translates to: SPEAEAVAPTER*AVPHRHRATAT
Trigger: AGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCCGTCGGAGCGACGGCCTCCGCCTCCGGACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp AGGCCGCCCTGGCCCACGTCCCCAGGATGGCCTAGCTGGGCCAGGTaGGGCTGTCGCAACCGCTGCTGCTGGTTCCGGGACGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: RPPWPTSPGWPSWAR*GCRNRCCWFRDAIC
Trigger: ACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCATCCTGGGGACGTGGGCCAGGGCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CTGGTGCTGTCCCCCTGGATGGGAGGGTTGGGCGGTCCTGAGGCTTaGGAGCCACCACCACTGGTCCCGGAAGGGCCTCCGGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LVLSPWMGGLGGPEA*EPPPLVPEGPPGPG
Trigger: CCCTGGACCCGGAGGCCCTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CCAGGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTGCTGCTCGTaGGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGGGATGTCCGG +
Preference number: 6 (lower is better)
Translates to: PGDESRQEAAHRCCS*GSGPAPGLVCRDVR
Trigger: CCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CGCCTGCTGCTCAAAGCCACTCAGGCGCCCGGCACCTaGGCTGCCCCCTTCGCGCTCAAAGTTCGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RLLLKATQAPGT*AAPFALKVRLG
Trigger: GCCCAGACGAACTTTGAGCGCGAAGGGGGCAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGCAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCAACTGGCCTAGGCCAGCTAAGCTGCCCCCAAACTaGAGCCCGGGCGAGGCCAGTGCGGGCACGTGGCCT +
Preference number: 6 (lower is better)
Translates to: CNWPRPAKLPPN*SPGEASAGTWP
Trigger: AGGCCACGTGCCCGCACTGGCCTCGCCCGGGCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGACCTGCTCCAGGCCTGGTGTGCCGGGATGTCCGGTaGCCACGCCCCCACCATAGCTGTCAGGGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: GPAPGLVCRDVR*PRPHHSCQGLR
Trigger: CCTCAACCCCTGACAGCTATGGTGGGGGCGTGGGCACCGGACATCCCGGCACACCAGGCCTGGAGCAGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TGCAGGCCGCCACTGGGTGTGCCAGCCTCACCCTGCTaGGGCCGCGGGAGCGCAGGAGGGCAAGAATTCTGT +
Preference number: 6 (lower is better)
Translates to: CRPPLGVPASPC*GRGSAGGQEFC
Trigger: ACAGAATTCTTGCCCTCCTGCGCTCCCGCGGCCCCAGCAGGGTGAGGCTGGCACACCCAGTGGCGGCCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAGGGTaGTCCCGAGGAAAAGCTGTCCGGCACAGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: QGLVVRPRVLQG*SRGKAVRHRRC
Trigger: ACACCGCCTGTGCCGGACAGCTTTTCCTCGGGACCACCCTTGCAGCACCCGGGGCCGGACCACCAGTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp AATCTCGTCAGGAGGCTGCGCACCGCTGCTGCTCGTTaGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: NLVRRLRTAAAR*GPDLLQAWCAG
Trigger: CCCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TGCGCCCAGCTTACTGGCCGAGTTGCGCTGGCTGGGTaGGAAATCTGGCTGCGGCGGGTAAGCGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: CAQLTGRVALAG*EIWLRRVSAPA
Trigger: GGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TCCCCCTGGATGGGAGGGTTGGGCGGTCCTGAGGCTTaGGAGCCACCACCACTGGTCCCGGAAGGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: SPWMGGLGGPEA*EPPPLVPEGPP
Trigger: CGGAGGCCCTTCCGGGACCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp GAATCTCGTCAGGAGGCTGCGCACCGCTGCTGCTCGTaGGGGTCCGGACCTGCTCCAGGCCTGGTGTGCCGG +
Preference number: 6 (lower is better)
Translates to: ESRQEAAHRCCS*GSGPAPGLVCR
Trigger: CCGGCACACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CAACGACAGTGCGCCCAGCTTACTGGCCGAGTTGCGCTGGCTGGGTaGGAAATCTGGCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGA +
Preference number: 6 (lower is better)
Translates to: QRQCAQLTGRVALAG*EIWLRRVSAPASTG
Trigger: TCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 72 bp ACCTCCGTAGCCAAGCAGCCGGCCCCCGTGCAGACATaGGGCACCTGGATCCGGACCACCGAAGTTGCCCCC +
Preference number: 6 (lower is better)
Translates to: TSVAKQPAPVQT*GTWIRTTEVAP
Trigger: GGGGGCAACTTCGGTGGTCCGGATCCAGGTGCCTCATGTCTGCACGGGGGCCGGCTGCTTGGCTACGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CAAGCCCAAGATCGGGGGTTCGCCCAGAGCGCTTATTaGAGGGTCCACGGGGCCAGTAGGAGGCCCGGCGTG +
Preference number: 6 (lower is better)
Translates to: QAQDRGFAQSAY*RVHGASRRPGV
Trigger: CACGCCGGGCCTCCTACTGGCCCCGTGGACCCTGCAATAAGCGCTCTGGGCGAACCCCCGATCTTGGGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTGCTGCTaGTGCAGGGACTGGTGGTCCGGCCCCGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CRDWWSGPGCC
Trigger: GCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCTGCTCAAAGCCACTCAGGCGCCCGGCACCTGCGCTaGCCCCTTCGCGCTCAAAGTTCGTCTGGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: AAQSHSGARHLR*PLRAQSSSGPS
Trigger: GCTTGGCCCAGACGAACTTTGAGCGCGAAGGGGGCAGCGCAGGTGCCGGGCGCCTGAGTGGCTTTGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGCGAATTCACGCCTGGAGCGCTGTGCGGAGTGGCCTaGCGGCTGCCTGAACCGAATGGAAAGCCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GEFTPGALCGVA*RLPEPNGKPGW
Trigger: CCAGCCGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTGCTaGTCGTTGGGGTCCGGACCTGCTCCAGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: GDESRQEAAHRC*SLGSGPAPGLV
Trigger: CACCAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCAGGGGATGAATCTCGTCAGGAGGCTGCGCACCGCTaGTGCTCGTTGGGGTCCGGACCTGCTCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: PGDESRQEAAHR*CSLGSGPAPGL
Trigger: CAGGCCTGGAGCAGGTCCGGACCCCAACGAGCAGCAGCGGTGCGCAGCCTCCTGACGAGATTCATCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TCGGGGGCGAATTCACGCCTGGAGCGCTGTGCGGAGTaGCCTGCCGGCTGCCTGAACCGAATGGAAAGCCCG +
Preference number: 6 (lower is better)
Translates to: SGANSRLERCAE*PAGCLNRMESP
Trigger: CGGGCTTTCCATTCGGTTCAGGCAGCCGGCAGGCCACTCCGCACAGCGCTCCAGGCGTGAATTCGCCCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CTTACTGGCCGAGTTGCGCTGGCTGGGTTGGAAATCTaGCTGCGGCGGGTAAGCGCCCCCGCCAGCACCGGA +
Preference number: 6 (lower is better)
Translates to: LTGRVALAGLEI*LRRVSAPASTG
Trigger: TCCGGTGCTGGCGGGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CAGCGCCCACCCCTCGAGGAGGGAGTTTCGGTGAGCTaGTCACCAGGGGACTTCGGCTGGCTTTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: QRPPLEEGVSVS*SPGDFGWLWPG
Trigger: CCCTGGCCAAAGCCAGCCGAAGTCCCCTGGTGACCAGCTCACCGAAACTCCCTCCTCGAGGGGTGGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 72 bp TCCGGTGCCCACGCCCCCACCATAGCTGTCAGGGGTTaGGGTAGAGGTAGACAGGATGCCCAGGCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SGAHAPTIAVRG*GRGRQDAQAQG
Trigger: GCCCTGGGCCTGGGCATCCTGTCTACCTCTACCTCAACCCCTGACAGCTATGGTGGGGGCGTGGGCACCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCCATTCCACGAGGCGCAGCGGTCCACGCCTGCGCTaGCCGGAAAGTCAAAACGCGGCCTCTTGGCCACGT +
Preference number: 6 (lower is better)
Translates to: CHSTRRSGPRLR*PESQNAASWPR
Trigger: ACGTGGCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CATGCTGCCATTCCACGAGGCGCAGCGGTCCACGCCTaGGCTGCCCGGAAAGTCAAAACGCGGCCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: HAAIPRGAAVHA*AARKVKTRPLG
Trigger: GCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCTGCTGCTGCTGTTGTTGCTGCTGCTGCTGCTGCTaGAGGGACTGGTGGTCCGGCCCCGGGTGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*RDWWSGPGCCK
Trigger: CTTGCAGCACCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGAGCGTTTGGCAGTCCCACACCGGCACCGGGCGACTaGAACTGGCCTAGGCCAGCTAAGCTGCCCCCAAAC +
Preference number: 6 (lower is better)
Translates to: GAFGSPTPAPGD*NWPRPAKLPPN
Trigger: GTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAACGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CCAAACTGCAGCCCGGGCGAGGCCAGTGCGGGCACGTaGCCTTCTCCTGGCATCCTCAGAGGCTCCTGCAAA +
Preference number: 6 (lower is better)
Translates to: PNCSPGEASAGT*PSPGILRGSCK
Trigger: TTTGCAGGAGCCTCTGAGGATGCCAGGAGAAGGCCACGTGCCCGCACTGGCCTCGCCCGGGCTGCAGTTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp ACAGTGCGCCCAGCTTACTGGCCGAGTTGCGCTGGCTaGGTTGGAAATCTGGCTGCGGCGGGTAAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: TVRPAYWPSCAG*VGNLAAAGKRP
Trigger: GGGGCGCTTACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGGAGAGACTGGTGCTGTCCCCCTGGATGGGAGGGTTaGGCGGTCCTGAGGCTTTGGAGCCACCACCACTGG +
Preference number: 6 (lower is better)
Translates to: GRDWCCPPGWEG*AVLRLWSHHHW
Trigger: CCAGTGGTGGTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CAGTGGACAGTCAGGCACTGCAGGTGGCTGCCGGGCTaGGTGGCTGAGGCCTTGTTGGTGGGGTGGTCATGG +
Preference number: 6 (lower is better)
Translates to: QWTVRHCRWLPG*VAEALLVGWSW
Trigger: CCATGACCACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp GACCCCAACGACAGTGCGCCCAGCTTACTGGCCGAGTaGCGCTGGCTGGGTTGGAAATCTGGCTGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: DPNDSAPSLLAE*RWLGWKSGCGG
Trigger: CCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCATGTGCTCATAACTCTCTGCGAAGGGAGGCTGGCTaGCCAGGCCGCCCGCTGCACCTCCGTAGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: PCAHNSLRREAG*PGRPLHLRSQA
Trigger: TGCTTGGCTACGGAGGTGCAGCGGGCGGCCTGGGCAGCCAGCCTCCCTTCGCAGAGAGTTATGAGCACATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTaGTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCRDWWSGPG
Trigger: CCCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp ACCCCAACGACAGTGCGCCCAGCTTACTGGCCGAGTTaGGCTGGCTGGGTTGGAAATCTGGCTGCGGCGGGT +
Preference number: 6 (lower is better)
Translates to: TPTTVRPAYWPS*AGWVGNLAAAG
Trigger: ACCCGCCGCAGCCAGATTTCCAACCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCCTCCGGGGAAGTAATCCGAGCCCGGGTTACCGGCTaGAACCGCGCTGTCGGGCTCGTTCTGGCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: PSGEVIRARVTG*NRAVGLVLAQF
Trigger: AAACTGAGCCAGAACGAGCCCGACAGCGCGGTTGCAGCCGGTAACCCGGGCTCGGATTACTTCCCCGGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CATCTGTGCAGTGGACAGTCAGGCACTGCAGGTGGCTaGCGGGCTGGGTGGCTGAGGCCTTGTTGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: HLCSGQSGTAGG*RAGWLRPCWWG
Trigger: ACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCCACCTGCAGTGCCTGACTGTCCACTGCACAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GCCGATGGATGGGATACTCGAACTGAGCATGTTGACTaGGCAGCATGGGGCCCCCGTCCTGCAGGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: ADGWDTRTEHVD*AAWGPRPAGRH
Trigger: GTGGCGGCCTGCAGGACGGGGGCCCCATGCTGCCCAGTCAACATGCTCAGTTCGAGTATCCCATCCATCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TTTGGCAGTCCCACACCGGCACCGGGCGACTGCAACTaGCCTAGGCCAGCTAAGCTGCCCCCAAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: FGSPTPAPGDCN*PRPAKLPPNCS
Trigger: GCTGCAGTTTGGGGGCAGCTTAGCTGGCCTAGGCCAGTTGCAGTCGCCCGGTGCCGGTGTGGGACTGCCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TTGGCTGTGCTGTCCAGGGACGCCATGAGGTCCGGCTaGTCCCCAAGGAGAAGCTCGGCTCCTTTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: LAVLSRDAMRSG*SPRRSSAPLPH
Trigger: GTGGGGCAAAGGAGCCGAGCTTCTCCTTGGGGACCAGCCGGACCTCATGGCGTCCCTGGACAGCACAGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GCAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCCTTaGGGTCACCATCTGTGCAGTGGACAGTCAGGCACT +
Preference number: 6 (lower is better)
Translates to: AETARWVRRCGP*GHHLCSGQSGT
Trigger: AGTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TGCAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCCTaGGGGTCACCATCTGTGCAGTGGACAGTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: CRDRQVGTEVRA*GSPSVQWTVRH
Trigger: GTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCAAACCTCTCGAAGAACACTCCGTGCTGCGGTTGCTaGTGTTGTGGAGGCGGCTGGGGTGGCTGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: PNLSKNTPCCGC*CCGGGWGGWLC
Trigger: GCACAGCCAGCCACCCCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTTCGAGAGGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TTTCGGGCCCCGCCAAACCTCTCGAAGAACACTCCGTaGTGCGGTTGCTGCTGTTGTGGAGGCGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: FRAPPNLSKNTP*CGCCCCGGGWG
Trigger: ACCCCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTTCGAGAGGTTTGGCGGGGCCCGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTaGCTGCTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLLLQGLVVRPR
Trigger: CCGGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GGGCGGCTCGCTCGGGTAATTGTATTCCAGGGAATCTACGGCTCCTaGGTTCGTCACCCTCCGGGGCTCCAGGCTGTGAGAATCCGAGCC +
Preference number: 6 (lower is better)
Translates to: GRLARVIVFQGIYGS*VRHPPGLQAVRIRA
Trigger: GGCTCGGATTCTCACAGCCTGGAGCCCCGGAGGGTGACGAACCAAGGAGCCGTAGATTCCCTGGAATACAATTACCCGAGCGAGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp ATATCAGAGTGCAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCCTaGGGGTCACCATCTGTGCAGTGGACAGTCAGGCACTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: ISECRDRQVGTEVRA*GSPSVQWTVRHCRW
Trigger: CCACCTGCAGTGCCTGACTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCAGACATGAGGCACCTGGATCCGGACCACCGAAGTTaGCCCCAAAGTGGGGGTGATGCTGGTGCGGGTGAT +
Preference number: 6 (lower is better)
Translates to: ADMRHLDPDHRS*PQSGGDAGAGD
Trigger: ATCACCCGCACCAGCATCACCCCCACTTTGGGGGCAACTTCGGTGGTCCGGATCCAGGTGCCTCATGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTGCTaGTGCTGCTGCTGCAGGGACTGGTGGTCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCRDWWSGP
Trigger: GGGGCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TATCAGAGTGCAGAGACCGCCAGGTGGGTACGGAGGTaGGGGCCTTGGGGTCACCATCTGTGCAGTGGACAG +
Preference number: 6 (lower is better)
Translates to: YQSAETARWVRR*GPWGHHLCSGQ
Trigger: CTGTCCACTGCACAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp AGCTGGGCCAGGTTGGGCTGTCGCAACCGCTGCTGCTaGTTCCGGGACGCCATCTGTTTAATCATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: SWARLGCRNRCC*FRDAICLIMRA
Trigger: GGCCCTCATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CTGCCGGGCTGGGTGGCTGAGGCCTTGTTGGTGGGGTaGTCATGGGCTTCTTTGTTGTTGGGGTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LPGWVAEALLVG*SWASLLLGFWD
Trigger: GTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp GCGAACTCACCCACGTGCGGGGAACTACCATCTGATTaGGCTGTGCTGTCCAGGGACGCCATGAGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: ANSPTCGELPSD*AVLSRDAMRSG
Trigger: GCCGGACCTCATGGCGTCCCTGGACAGCACAGCCAAATCAGATGGTAGTTCCCCGCACGTGGGTGAGTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CACTGCAGGTGGCTGCCGGGCTGGGTGGCTGAGGCCTaGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: HCRWLPGWVAEA*LVGWSWASLLL
Trigger: CAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGCCTCAGCCACCCAGCCCGGCAGCCACCTGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CCCGCCAAACCTCTCGAAGAACACTCCGTGCTGCGGTTGCTGCTGTaGTGGAGGCGGCTGGGGTGGCTGGCTGTGCATTTTGGACAAACC +
Preference number: 6 (lower is better)
Translates to: PAKPLEEHSVLRLLL*WRRLGWLAVHFGQT
Trigger: GGTTTGTCCAAAATGCACAGCCAGCCACCCCAGCCGCCTCCACAACAGCAGCAACCGCAGCACGGAGTGTTCTTCGAGAGGTTTGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GCAGCCAGGCAGCTCTGGCCGAACAGGTTGTCCTTAGAGCTGGGCTaGTTGAAAGACCCCAACGACAGTGCGCCCAGCTTACTGGCCGAG +
Preference number: 6 (lower is better)
Translates to: AARQLWPNRLSLELG*LKDPNDSAPSLLAE
Trigger: CTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAGCTGCCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp TCATCAGAGGCGAACTCACCCACGTGCGGGGAACTACCATCTGATTaGGCTGTGCTGTCCAGGGACGCCATGAGGTCCGGCTGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: SSEANSPTCGELPSD*AVLSRDAMRSGWSP
Trigger: TGGGGACCAGCCGGACCTCATGGCGTCCCTGGACAGCACAGCCAAATCAGATGGTAGTTCCCCGCACGTGGGTGAGTTCGCCTCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp TTGTTGGGGTTCTGGGACTTGGCCTTCTCCCAGGGCGCCAGCGTCTaGTCCTCATCTCCACCATCCACCAGGGCCTTGTCAGGTGGCATG +
Preference number: 6 (lower is better)
Translates to: LLGFWDLAFSQGASV*SSSPPSTRALSGGM
Trigger: CATGCCACCTGACAAGGCCCTGGTGGATGGTGGAGATGAGGACAAGACGCTGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GTGGCTGAGGCCTTGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTaGGGGTTCTGGGACTTGGCCTTCTCCCAGGGCGCCAGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: VAEALLVGWSWASLL*GFWDLAFSQGASVL
Trigger: CAAGACGCTGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGCCTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GAGAGAGTTGGTTGTCTAGGGTACCGTTATGCATGCTaGCATTCCACGAGGCGCAGCGGTCCACGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: ERVGCLGYRYAC*HSTRRSGPRLR
Trigger: GCGCAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTACCCTAGACAACCAACTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGCTGTTGTTGTTGCTGCTGCTGCTGCTGTTGTTGCTaGTGCTGCTGCTGCTGCAGGGACTGGTGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCCRDWWSG
Trigger: GCCGGACCACCAGTCCCTGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTGCTaGTGGTTCCGGGACGCCATCTGTTTAATCATGAGG +
Preference number: 6 (lower is better)
Translates to: PSWARLGCRNRC*WFRDAICLIMR
Trigger: CCTCATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGGCCTAGCTGGGCCAGGTTGGGCTGTCGCAACCGCTaGTGCTGGTTCCGGGACGCCATCTGTTTAATCATG +
Preference number: 6 (lower is better)
Translates to: WPSWARLGCRNR*CWFRDAICLIM
Trigger: CATGATTAAACAGATGGCGTCCCGGAACCAGCAGCAGCGGTTGCGACAGCCCAACCTGGCCCAGCTAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CTTAGAGCTGGGCTTGTTGAAAGACCCCAACGACAGTaGGCCCAGCTTACTGGCCGAGTTGCGCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LRAGLVERPQRQ*AQLTGRVALAG
Trigger: CCCAGCCAGCGCAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CGCCTGCGCTGCCCGGAAAGTCAAAACGCGGCCTCTTaGCCACGTTCATGTAAGGGGGCGCATCGAAATGCT +
Preference number: 6 (lower is better)
Translates to: RLRCPESQNAAS*PRSCKGAHRNA
Trigger: AGCATTTCGATGCGCCCCCTTACATGAACGTGGCCAAGAGGCCGCGTTTTGACTTTCCGGGCAGCGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TATAATTGGGGGAGAGACTGGTGCTGTCCCCCTGGATaGGAGGGTTGGGCGGTCCTGAGGCTTTGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: YNWGRDWCCPPG*EGWAVLRLWSH
Trigger: GTGGCTCCAAAGCCTCAGGACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CCGACGTTGATTCCAGGGTATAATTGGGGGAGAGACTaGTGCTGTCCCCCTGGATGGGAGGGTTGGGCGGTC +
Preference number: 6 (lower is better)
Translates to: PTLIPGYNWGRD*CCPPGWEGWAV
Trigger: GACCGCCCAACCCTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp ATCGGTTGGAGATATCAGAGTGCAGAGACCGCCAGGTaGGTACGGAGGTGCGGGCCTTGGGGTCACCATCTG +
Preference number: 6 (lower is better)
Translates to: IGWRYQSAETAR*VRRCGPWGHHL
Trigger: CAGATGGTGACCCCAAGGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAACCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp GCCTTGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTaGGGGTTCTGGGACTTGGCCTTCTCCCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: ALLVGWSWASLL*GFWDLAFSQGA
Trigger: GGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GCCAGGCAGCTCTGGCCGAACAGGTTGTCCTTAGAGCTGGGCTTGTaGAAAGACCCCAACGACAGTGCGCCCAGCTTACTGGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: ARQLWPNRLSLELGL*KDPNDSAPSLLAEL
Trigger: CAACTCGGCCAGTAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAGCTGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp CAGGGCGCCAGCGTCTTGTCCTCATCTCCACCATCCACCAGGGCCTaGTCAGGTGGCATGTACCAGGTAGTGCTGTGTTCTGCCATCAGG +
Preference number: 6 (lower is better)
Translates to: QGASVLSSSPPSTRA*SGGMYQVVLCSAIR
Trigger: CCTGATGGCAGAACACAGCACTACCTGGTACATGCCACCTGACAAGGCCCTGGTGGATGGTGGAGATGAGGACAAGACGCTGGCGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 72 bp ATGCTCAGTCCGGCTTCGTTAAAGTTCCCCTCGCCCTaGCCAGCGTGCCGGCTGTTGATCTGGGGCTCGAAT +
Preference number: 6 (lower is better)
Translates to: MLSPASLKFPSP*PACRLLIWGSN
Trigger: ATTCGAGCCCCAGATCAACAGCCGGCACGCTGGTCAGGGCGAGGGGAACTTTAACGAAGCCGGACTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 72 bp AGAGGCGAACTCACCCACGTGCGGGGAACTACCATCTaGTTTGGCTGTGCTGTCCAGGGACGCCATGAGGTC +
Preference number: 6 (lower is better)
Translates to: RGELTHVRGTTI*FGCAVQGRHEV
Trigger: GACCTCATGGCGTCCCTGGACAGCACAGCCAAATCAGATGGTAGTTCCCCGCACGTGGGTGAGTTCGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp AGGGAGAGAGTTGGTTGTCTAGGGTACCGTTATGCATaGTGCCATTCCACGAGGCGCAGCGGTCCACGCCTG +
Preference number: 6 (lower is better)
Translates to: RERVGCLGYRYA*CHSTRRSGPRL
Trigger: CAGGCGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTACCCTAGACAACCAACTCTCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCAGAGGGAGAGAGTTGGTTGTCTAGGGTACCGTTATaGATGCTGCCATTCCACGAGGCGCAGCGGTCCACG +
Preference number: 6 (lower is better)
Translates to: AEGESWLSRVPL*MLPFHEAQRST
Trigger: CGTGGACCGCTGCGCCTCGTGGAATGGCAGCATGCATAACGGTACCCTAGACAACCAACTCTCTCCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCCACAAATGTCCCAAATCGGTTGGAGATATCAGAGTaGAGAGACCGCCAGGTGGGTACGGAGGTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: ATNVPNRLEISE*RDRQVGTEVRA
Trigger: GGCCCGCACCTCCGTACCCACCTGGCGGTCTCTGCACTCTGATATCTCCAACCGATTTGGGACATTTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TTCTGGCAAGCAGTGGAGAGCGCAGCCAGGCAGCTCTaGCCGAACAGGTTGTCCTTAGAGCTGGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FWQAVESAARQL*PNRLSLELGLL
Trigger: CAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAGCTGCCTGGCTGCGCTCTCCACTGCTTGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CCTTGTTGGTGGGGTGGTCATGGGCTTCTTTGTTGTTaGGGTTCTGGGACTTGGCCTTCTCCCAGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: PCWWGGHGLLCC*GSGTWPSPRAP
Trigger: TGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACCACCCCACCAACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TGTTGTGGAGGCGGCTGGGGTGGCTGGCTGTGCATTTaGGACAAACCCACCATGCCTGAGGCTCTAGGCATG +
Preference number: 6 (lower is better)
Translates to: CCGGGWGGWLCI*DKPTMPEALGM
Trigger: CATGCCTAGAGCCTCAGGCATGGTGGGTTTGTCCAAAATGCACAGCCAGCCACCCCAGCCGCCTCCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GGAGGGAGTTTCGGTGAGCTGGTCACCAGGGGACTTCGGCTGGCTTaGGCCAGGGCTGTAGTGTTGTCAGAACTGGATGACACTTCGTCC +
Preference number: 6 (lower is better)
Translates to: GGSFGELVTRGLRLA*ARAVVLSELDDTSS
Trigger: GGACGAAGTGTCATCCAGTTCTGACAACACTACAGCCCTGGCCAAAGCCAGCCGAAGTCCCCTGGTGACCAGCTCACCGAAACTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS TCA 72 bp GCCCCCAGGGACAGGCTTGCCATCGTTACCCGACGTTaGTTCCAGGGTATAATTGGGGGAGAGACTGGTGCT +
Preference number: 6 (lower is better)
Translates to: APRDRLAIVTRR*FQGIIGGETGA
Trigger: AGCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGGGTAACGATGGCAAGCCTGTCCCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGAGTCCAGGTCGATAGTACTCATGGCGCTCTTGACTaGTTCGGAGCAGCAGCTACCCAACTCGCTGTCACC +
Preference number: 6 (lower is better)
Translates to: GVQVDSTHGALD*FGAAATQLAVT
Trigger: GGTGACAGCGAGTTGGGTAGCTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTACTATCGACCTGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGTCATGGGCTTCTTTGTTGTTGGGGTTCTGGGACTTaGCCTTCTCCCAGGGCGCCAGCGTCTTGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: GHGLLCCWGSGT*PSPRAPASCPH
Trigger: ATGAGGACAAGACGCTGGCGCCCTGGGAGAAGGCCAAGTCCCAGAACCCCAACAACAAAGAAGCCCATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp GCTCGGGTAATTGTATTCCAGGGAATCTACGGCTCCTaGGTTCGTCACCCTCCGGGGCTCCAGGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: ARVIVFQGIYGS*VRHPPGLQAVR
Trigger: TCTCACAGCCTGGAGCCCCGGAGGGTGACGAACCAAGGAGCCGTAGATTCCCTGGAATACAATTACCCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TGCCCCCAGGGACAGGCTTGCCATCGTTACCCGACGTaGATTCCAGGGTATAATTGGGGGAGAGACTGGTGC +
Preference number: 6 (lower is better)
Translates to: CPQGQACHRYPT*IPGYNWGRDWC
Trigger: GCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGGGTAACGATGGCAAGCCTGTCCCTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GTCCTCCGAGATGCTAAATTGTTGTCTCTGCAGCTGGATCTGGGCTaGGAGGATCTCCAGGGGATGAATCTCGTCAGGAGGCTGCGCACC +
Preference number: 6 (lower is better)
Translates to: VLRDAKLLSLQLDLG*EDLQGMNLVRRLRT
Trigger: GGTGCGCAGCCTCCTGACGAGATTCATCCCCTGGAGATCCTCCAAGCCCAGATCCAGCTGCAGAGACAACAATTTAGCATCTCGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp TGTTCTGCCATCAGGGAGTCCAGGTCGATAGTACTCATGGCGCTCTaGACTGCTTCGGAGCAGCAGCTACCCAACTCGCTGTCACCGTTC +
Preference number: 6 (lower is better)
Translates to: CSAIRESRSIVLMAL*TASEQQLPNSLSPF
Trigger: GAACGGTGACAGCGAGTTGGGTAGCTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTACTATCGACCTGGACTCCCTGATGGCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp CGGGACGCCATCTGTTTAATCATGAGGGCCGCATTCTaGCGTTGCTGTTGCTGCTGCTGCTGTTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: RDAICLIMRAAF*RCCCCCCCCCC
Trigger: ACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp TGCCATCGTTACCCGACGTTGATTCCAGGGTATAATTaGGGGAGAGACTGGTGCTGTCCCCCTGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: CHRYPTLIPGYN*GRDWCCPPGWE
Trigger: CTCCCATCCAGGGGGACAGCACCAGTCTCTCCCCCAATTATACCCTGGAATCAACGTCGGGTAACGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GTCCTCATCTCCACCATCCACCAGGGCCTTGTCAGGTaGCATGTACCAGGTAGTGCTGTGTTCTGCCATCAG +
Preference number: 6 (lower is better)
Translates to: VLISTIHQGLVR*HVPGSAVFCHQ
Trigger: CTGATGGCAGAACACAGCACTACCTGGTACATGCCACCTGACAAGGCCCTGGTGGATGGTGGAGATGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CTCTGGCCGAACAGGTTGTCCTTAGAGCTGGGCTTGTaGAAAGACCCCAACGACAGTGCGCCCAGCTTACTG +
Preference number: 6 (lower is better)
Translates to: LWPNRLSLELGL*KDPNDSAPSLL
Trigger: CAGTAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CAGCTCTGGCCGAACAGGTTGTCCTTAGAGCTGGGCTaGTTGAAAGACCCCAACGACAGTGCGCCCAGCTTA +
Preference number: 6 (lower is better)
Translates to: QLWPNRLSLELG*LKDPNDSAPSL
Trigger: TAAGCTGGGCGCACTGTCGTTGGGGTCTTTCAACAAGCCCAGCTCTAAGGACAACCTGTTCGGCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp AGGGGACTTCGGCTGGCTTTGGCCAGGGCTGTAGTGTaGTCAGAACTGGATGACACTTCGTCCTCGTTCGCA +
Preference number: 6 (lower is better)
Translates to: RGLRLALARAVV*SELDDTSSSFA
Trigger: TGCGAACGAGGACGAAGTGTCATCCAGTTCTGACAACACTACAGCCCTGGCCAAAGCCAGCCGAAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CTTGAGCCCCAGGGGCTGGTCCTCCGAGATGCTAAATaGTTGTCTCTGCAGCTGGATCTGGGCTTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: LEPQGLVLRDAK*LSLQLDLGLED
Trigger: ATCCTCCAAGCCCAGATCCAGCTGCAGAGACAACAATTTAGCATCTCGGAGGACCAGCCCCTGGGGCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp ATCAGGGAGTCCAGGTCGATAGTACTCATGGCGCTCTaGACTGCTTCGGAGCAGCAGCTACCCAACTCGCTG +
Preference number: 6 (lower is better)
Translates to: IRESRSIVLMAL*TASEQQLPNSL
Trigger: CAGCGAGTTGGGTAGCTGCTGCTCCGAAGCAGTCAAGAGCGCCATGAGTACTATCGACCTGGACTCCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GGACGCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTaGCTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRHLFNHEGRILALL*LLLLLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GTTCCGGGACGCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTaGCTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VPGRHLFNHEGRILA*LLLLLLLLLLLLLL
Trigger: CAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCGTCCCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp GGCTCGTTCTGGCTCAGTTTCCTCTTCCCCTCGGGTGGGTTCTTCTaGTTGAAAGTCACGTTGAGGTTAGGAGCACCCAGGCTGGCAATC +
Preference number: 6 (lower is better)
Translates to: GSFWLSFLFPSGGFF*LKVTLRLGAPRLAI
Trigger: GATTGCCAGCCTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACTGAGCCAGAACGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp AGCGTCTTGTCCTCATCTCCACCATCCACCAGGGCCTaGTCAGGTGGCATGTACCAGGTAGTGCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: SVLSSSPPSTRA*SGGMYQVVLCS
Trigger: AGAACACAGCACTACCTGGTACATGCCACCTGACAAGGCCCTGGTGGATGGTGGAGATGAGGACAAGACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GGATGCTGCATGCTGAAGACAGGCTCAGAATATGGGTaGATGCTCCGGTTCTCTAGCCGATGGATGGGATAC +
Preference number: 6 (lower is better)
Translates to: GCCMLKTGSEYG*MLRFSSRWMGY
Trigger: GTATCCCATCCATCGGCTAGAGAACCGGAGCATGCACCCATATTCTGAGCCTGTCTTCAGCATGCAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TTAATCATGAGGGCCGCATTCTGGCGTTGCTGTTGCTaGTGCTGCTGTTGCTGCTGTTGTTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LIMRAAFWRCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp AACTGGATGACACTTCGTCCTCGTTCGCATAACTTGTaGTCACCTCATCAGAGGCGAACTCACCCACGTGCG +
Preference number: 6 (lower is better)
Translates to: NWMTLRPRSHNL*SPHQRRTHPRA
Trigger: CGCACGTGGGTGAGTTCGCCTCTGATGAGGTGAGCACAAGTTATGCGAACGAGGACGAAGTGTCATCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp CTTGTCAGGTGGCATGTACCAGGTAGTGCTGTGTTCTaGCATCAGGGAGTCCAGGTCGATAGTACTCATGGC +
Preference number: 6 (lower is better)
Translates to: LVRWHVPGSAVF*HQGVQVDSTHG
Trigger: GCCATGAGTACTATCGACCTGGACTCCCTGATGGCAGAACACAGCACTACCTGGTACATGCCACCTGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp GGGCTCGTTCTGGCTCAGTTTCCTCTTCCCCTCGGGTaGGTTCTTCTTGTTGAAAGTCACGTTGAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: GLVLAQFPLPLG*VLLVESHVEVR
Trigger: CCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACTGAGCCAGAACGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CGCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTaGCTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RHLFNHEGRILA*LLLLLLLLLLL
Trigger: CAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TGGCTCAGTTTCCTCTTCCCCTCGGGTGGGTTCTTCTaGTTGAAAGTCACGTTGAGGTTAGGAGCACCCAGG +
Preference number: 6 (lower is better)
Translates to: WLSFLFPSGGFF*LKVTLRLGAPR
Trigger: CCTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp TCGTTCTGGCTCAGTTTCCTCTTCCCCTCGGGTGGGTTCTTCTTGTaGAAAGTCACGTTGAGGTTAGGAGCACCCAGGCTGGCAATCATG +
Preference number: 6 (lower is better)
Translates to: SFWLSFLFPSGGFFL*KVTLRLGAPRLAIM
Trigger: CATGATTGCCAGCCTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACTGAGCCAGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp TGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTTaGTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CLIMRAAFWRCC*CCCCCCCCCCC
Trigger: GCAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS GCA 72 bp GCCATCTGTTTAATCATGAGGGCCGCATTCTGGCGTTaGTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTTGT +
Preference number: 6 (lower is better)
Translates to: AICLIMRAAFWR*CCCCCCCCCCC
Trigger: ACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CCA 72 bp AATATGGGTGCATGCTCCGGTTCTCTAGCCGATGGATaGGATACTCGAACTGAGCATGTTGACTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: NMGACSGSLADG*DTRTEHVDWAA
Trigger: TGCTGCCCAGTCAACATGCTCAGTTCGAGTATCCCATCCATCGGCTAGAGAACCGGAGCATGCACCCATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CTGTTTAATCATGAGGGCCGCATTCTGGCGTTGCTGTaGCTGCTGCTGCTGTTGCTGCTGTTGTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LFNHEGRILALL*LLLLLLLLLLL
Trigger: CAGCAACAACAACAGCAGCAACAGCAGCAGCAGCAACAGCAACGCCAGAATGCGGCCCTCATGATTAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp TTCCCCTCGGGTGGGTTCTTCTTGTTGAAAGTCACGTaGAGGTTAGGAGCACCCAGGCTGGCAATCATGTTC +
Preference number: 6 (lower is better)
Translates to: FPSGGFFLLKVT*RLGAPRLAIMF
Trigger: GAACATGATTGCCAGCCTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 72 bp CAGAACTGGATGACACTTCGTCCTCGTTCGCATAACTaGTGCTCACCTCATCAGAGGCGAACTCACCCACGT +
Preference number: 6 (lower is better)
Translates to: QNWMTLRPRSHN*CSPHQRRTHPR
Trigger: ACGTGGGTGAGTTCGCCTCTGATGAGGTGAGCACAAGTTATGCGAACGAGGACGAAGTGTCATCCAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5
CDS CAA 90 bp AGTTTCCTCTTCCCCTCGGGTGGGTTCTTCTTGTTGAAAGTCACGTaGAGGTTAGGAGCACCCAGGCTGGCAATCATGTTCTGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: SFLFPSGGFFLLKVT*RLGAPRLAIMFWQA
Trigger: TGCTTGCCAGAACATGATTGCCAGCCTGGGTGCTCCTAACCTCAACGTGACTTTCAACAAGAAGAACCCACCCGAGGGGAAGAGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094463.5