Pregenerated sensors for MMUT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023921Ensembl transcript IDs: ENSMUST00000169611.4, ENSMUST00000233222.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTAATAGTAGGTCTGGCTaGGGATCCATCCATAAATAC | + |
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Preference number: 2 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGNSRSG*GSIHKY Trigger: GTATTTATGGATGGATCCTCAGCCAGACCTACTATT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| 3UTR-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTAAGCATTCTAAGAGCTaGTGGGATTACCTGACGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGKHSKS*WDYLTK Trigger: TTTCGTCAGGTAATCCCAGCAGCTCTTAGAATGCTT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| 3UTR-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTATAATTTGCAGGACATaGAGGCACATACCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGIICRT*RHIPLI Trigger: GATTAAAGGTATGTGCCTCCATGTCCTGCAAATTAT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| 3UTR TCA 72 bp | TCCAAAGCAAGCATTCTAAGAGCTGCTGGGATTACCTaGCGAAACGGATTTACCACTACCTTCTTCGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: SKASILRAAGIT*RNGFTTTFFGH Trigger: ATGACCGAAGAAGGTAGTGGTAAATCCGTTTCGTCAGGTAATCCCAGCAGCTCTTAGAATGCTTGCTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTATCCTGCTCAGTAAGTaGCCACCCCGATGTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGILLSK*PPRCLA Trigger: TGCCAGACATCGGGGTGGTCACTTACTGAGCAGGAT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTACGAGCTGCATCCACTaGCAGAGCCAGAATATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGTSCIH*QSQNIA Trigger: GGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTTGGTCCCCGTGTGAATaGCTTCACTCCTGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGWSPCE*LHSWKF Trigger: GAACTTCCAGGAGTGAAGCCATTCACACGGGGACCA...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTACAGACAACCCCTGCTaGCCAGCCTTAATATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGTDNPC*PALILS Trigger: GGACAATATTAAGGCTGGTCAGCAGGGGTTGTCTGT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCTGCATACTGACGGATaGTCCAGGGCCTATAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGLHTDG*SRAYRY Trigger: ATACCTATAGGCCCTGGACCATCCGTCAGTATGCAG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCACAGTACTAAAGCCTaGATACTGACGGATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGHSTKA*ILTDGP Trigger: TGGACCATCCGTCAGTATGCAGGCTTTAGTACTGTG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTGCATCCACAGCTTGCTaGGCCACTTCACGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITASTAC*ATSRGV Trigger: GACTCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGC...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTACAGCCCATTCTGGGTaGAGGGGTTGCTGCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITTAHSG*RGCCWC Trigger: ACACCAGCAGCAACCCCTTCACCCAGAATGGGCTGT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCATAAACGTCATTTGTaGGCGACTCCATCATGTACG | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGHKRHL*ATPSCT Trigger: CGTACATGATGGAGTCGCTCACAAATGACGTTTATG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTCACGCCCCCACACATaGCAAGGATATCTGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLASRPHT*QGYLAA Trigger: GGCGGCCAGATATCCTTGTCATGTGTGGGGGCGTGA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTTTTTTGCCTTTCAGCTaGTTTTTGGCCAGTACAGCC | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGFLPFS*FLASTA Trigger: GGCTGTACTGGCCAAAAAGCAGCTGAAAGGCAAAAA...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCATATAAGGTCCTCTaGGTTTTTGCCTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPYKVL*VFAFQL Trigger: CAGCTGAAAGGCAAAAACCCAGAGGACCTTATATGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCAACCCATCTGCGATaGTATAGGCCAGTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPTHLR*YRPVLK Trigger: TTTTAGAACTGGCCTATACCATCGCAGATGGGTTGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCAGCAGCAAGTGTGCTaGCACCCACAGCATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITQQQVC*HPQHGH Trigger: ATGTCCATGCTGTGGGTGTCAGCACACTTGCTGCTG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTATCTTGTCCCATTTTTaGCACAAGAAGACGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGILSHF*HKKTRS Trigger: AGACCTCGTCTTCTTGTGGCAAAAATGGGACAAGAT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTCTGCATCCACAGCTTaGTGCGCCACTTCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLASASTA*CATSRG Trigger: TCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTAGACTGCTGCTTCTCTaGCAAACACTTCTCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGRLLLL*QTLLNI Trigger: GATATTGAGAAGTGTTTGGCAGAGAAGCAGCAGTCT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTTGGACAGCAGCTCTTaGAATCCGGGTTCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLDSSS*NPGSRT Trigger: GGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTATATCATCAAGCACTTaGACAGCAGCTCTTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGISSST*TAALGI Trigger: GATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATAT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTGATATGGTCCCCGTGTaGATGGCTTCACTCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITDMVPV*MASLLE Trigger: TTCCAGGAGTGAAGCCATTCACACGGGGACCATATC...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCCTGGAGTCCAGTTCTaGAGTACTCCAACCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITPGVQF*STPTHL Trigger: CAGATGGGTTGGAGTACTGCAGAACTGGACTCCAGG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTCAGTACAGCCCATTCTaGGTGAAGGGGTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAQYSPF*VKGLLL Trigger: CAGCAGCAACCCCTTCACCCAGAATGGGCTGTACTG...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTGGGCACTTTTCACAGTaGGCAAACCCAGCGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITGHFSQ*ANPALH Trigger: ATGAAGCGCTGGGTTTGCCCACTGTGAAAAGTGCCC...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCTGACACCCACAGCATaGACATCTGCATCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLTPTA*TSASTA Trigger: AGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTACTTCACGGGGAGTCTaGAAAAGAGGGCCTATGTCC | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLATSRGV*KRGPMS Trigger: GGACATAGGCCCTCTTTTTCAGACTCCCCGTGAAGT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTGACCACCCCGATGTCTaGCAGTGTGCTCTTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLADHPDV*QCALRR Trigger: TCTTCTAAGAGCACACTGCCAGACATCGGGGTGGTC...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTAAGGATCCGCCACTTTaGGGATCCCAGATTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITKDPPL*GSQILP Trigger: AGGAAGAATCTGGGATCCCCAAAGTGGCGGATCCTT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCAAATTCATCAATTGTaGGTCCAGCCTGGAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITQIHQL*VQPGVQ Trigger: CTGGACTCCAGGCTGGACTCACAATTGATGAATTTG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTGCTCAGCCAAAGCTTaGTCCCTGCTGGATTTAATC | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITCSAKA*SLLDLI Trigger: GATTAAATCCAGCAGGGATCAAGCTTTGGCTGAGCA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTCCTTCGGCACACCTTaGTCTTCCCCAGTTACTATA | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITSFGTP*SSPVTI Trigger: TATAGTAACTGGGGAAGAGCAAGGTGTGCCGAAGGA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTCAGCTCCTGCTTCCTaGATATGGTACCCGCTAATC | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLASAPAS*IWYPLI Trigger: GATTAGCGGGTACCATATGCAGGAAGCAGGAGCTGA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTAAACTCCTGCCGATATaGTCCACTCACCATACGATC | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITKLLPI*STHHTI Trigger: GATCGTATGGTGAGTGGAGCATATCGGCAGGAGTTT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTCTTTCTCCAAACTCCTaGCGATATGCTCCACTCACC | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLALSPNS*RYAPLT Trigger: GGTGAGTGGAGCATATCGGCAGGAGTTTGGAGAAAG...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCTTTCAGCTGCTTTTTaGCCAGTACAGCCCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLSAAF*PVQPIL Trigger: CAGAATGGGCTGTACTGGCCAAAAAGCAGCTGAAAG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCATCAAATAGGATTTTaGTGTCTTCTACAGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGHQIGF*CLLQCQ Trigger: TTGACACTGTAGAAGACACCAAAATCCTATTTGATG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTTTTCATCGATGGCTCTaGGGGAAAAATATAAGTATT | + |
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Preference number: 4 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGFHRWL*GKNISI Trigger: AATACTTATATTTTTCCCCCAGAGCCATCGATGAAA...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCCTGCTTCCTGCATATaGTACCCGCTAATCGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITPASCI*YPLIEM Trigger: CATTTCGATTAGCGGGTACCATATGCAGGAAGCAGG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTATTGTGAGTCCAGCCTaGAGTCCAGTTCTGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAIVSPA*SPVLQY Trigger: GTACTGCAGAACTGGACTCCAGGCTGGACTCACAAT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTGGTCCTCTGGGTTTTTaGCTTTCAGCTGCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAGPLGF*LSAAFW Trigger: CCAAAAAGCAGCTGAAAGGCAAAAACCCAGAGGACC...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTAGGCCAGTTCTAAAATaGCATCAGCTCCTGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLARPVLK*HQLLLP Trigger: AGGAAGCAGGAGCTGATGCCATTTTAGAACTGGCCT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCTTCAGCTACAGCTTTaGCCATTCCACCCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLQLQL*PFHPFL Trigger: AAGAAATGGGTGGAATGGCCAAAGCTGTAGCTGAAG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTTGGCTCCCCTGTCATaGCCATCTTGTCCCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLALAPLS*PSCPIF Trigger: AAAAATGGGACAAGATGGCCATGACAGGGGAGCCAA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR TCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTAACTCTGGGGTTGTCTaGATCATAACCACGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLANSGVV*IITTMC Trigger: ACACATCGTGGTTATGATTCAGACAACCCCAGAGTT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR TCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTTTAGGATGTCATTCTaGATTGTGCCAGTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITFRMSF*IVPVSF Trigger: GAAGCTCACTGGCACAATTCAGAATGACATCCTAAA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTGGCTTCGATTGCAGTaGGGACAATGTTATTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITWLRLQ*GQCYCK Trigger: CTTACAATAACATTGTCCGCACTGCAATCGAAGCCA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTATAGAGATCCCTTCTaGGGTGTGCCATATAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAYRDPF*GVPYKV Trigger: GACCTTATATGGCACACCCCAGAAGGGATCTCTATA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTATACATGGTAGGATATaGTCCCCGTGTGAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAIHGRI*SPCEWL Trigger: AAGCCATTCACACGGGGACCATATCCTACCATGTAT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTCATCTCCACGAACTCTaGGGTTGTCTGAATCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAHLHEL*GCLNHN Trigger: GTTATGATTCAGACAACCCCAGAGTTCGTGGAGATG...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTTTCGTATGCAAAGACTaGGTTCCTCCAAACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAFVCKD*VPPNTA Trigger: AGCTGTGTTTGGAGGAACCCAGTCTTTGCATACGAA...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCAGGACCAAAGACGTTaGAAACACCAACTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITQDQRR*KHQLHT Trigger: TGTATGAAGTTGGTGTTTCCAACGTCTTTGGTCCTG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR TCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTATCCCAGATTCTTCCTaGATGATGATCTGTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAIPDSS*MMICVF Trigger: GAACACACAGATCATCATTCAGGAAGAATCTGGGAT...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTTTTGGCATGTGCTGTaGTGTGTATTGGAAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITFWHVL*CVLENV Trigger: GACATTTTCCAATACACAGCACAGCACATGCCAAAA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTTGAGTTTTTCAATCTaGTTCTTACGCACTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLSFSI*FLRTEV Trigger: CACTTCAGTGCGTAAGAAGCAGATTGAAAAACTCAA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR GCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTTAAATTTTGGCATGTaGTGTGCTGTGTATTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITLNFGM*CAVYWK Trigger: TTTCCAATACACAGCACAGCACATGCCAAAATTTAA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTTGCTGTGCTGTGTATTaGAAAATGTCAGCAATAATT | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITCCAVY*KMSAII Trigger: AATTATTGCTGACATTTTCCAATACACAGCACAGCA...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CCA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTAATGGAATTAAATTTTaGCATGTGCTGTGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVITKDPDVTQTAASVITNGIKF*HVLCCV Trigger: TACACAGCACAGCACATGCCAAAATTTAATTCCATT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTGAAGAAAGACAACCTTaGTGCAAATTCATCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGVINTTFIEAIVGLAEERQP*CKFINC Trigger: ACAATTGATGAATTTGCACCAAGGTTGTCTTTCTTC...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS CCA 90 bp | ATAATCCTGTGGTGGAATCACGCCCCCACACATGACAAGGATATCTaGCCGCCCCAGGGCGGTGAGTTCTTTGATAAGCTCAGGAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: IILWWNHAPTHDKDI*PPQGGEFFDKLRNE Trigger: CTCGTTCCTGAGCTTATCAAAGAACTCACCGCCCTGGGGCGGCCAGATATCCTTGTCATGTGTGGGGGCGTGATTCCACCACAGGATTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS CCA 90 bp | AAATACCTGTGGTGGAATCACGCCCCCACACATGACAAGGATATCTaGCCGCCCCAGGGCGGTGAGTTCTTTGATAAGCTCAGGAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: KYLWWNHAPTHDKDI*PPQGGEFFDKLRNE Trigger: CTCGTTCCTGAGCTTATCAAAGAACTCACCGCCCTGGGGCGGCCAGATATCCTTGTCATGTGTGGGGGCGTGATTCCACCACAGGTATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233222.2 |
||
| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTATCTGCATCCACAGCTaGCTGCGCCACTTCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGICIHS*LRHFTG Trigger: CCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGAT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS TCA 90 bp | CCCAGGGCGGTGAGTTCTTTGATAAGCTCAGGAACGAGGGTTTTATaGCCAGCAGCAAGTGTGCTGACACCCACAGCATGGACATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRAVSSLISSGTRVL*PAASVLTPTAWTSA Trigger: TGCAGATGTCCATGCTGTGGGTGTCAGCACACTTGCTGCTGGTCATAAAACCCTCGTTCCTGAGCTTATCAAAGAACTCACCGCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
||
| CDS GCA 90 bp | TTTATGACCAGCAGCAAGTGTGCTGACACCCACAGCATGGACATCTaGATCCACAGCTTGCTGCGCCACTTCACGGGGAGTCTGAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMTSSKCADTHSMDI*IHSLLRHFTGSLKK Trigger: CTTTTTCAGACTCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAGCACACTTGCTGCTGGTCATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CCA 90 bp | GTCCAGCCTGGAGTCCAGTTCTGCAGTACTCCAACCCATCTGCGATaGTATAGGCCAGTTCTAAAATGGCATCAGCTCCTGCTTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQPGVQFCSTPTHLR*YRPVLKWHQLLLPA Trigger: TGCAGGAAGCAGGAGCTGATGCCATTTTAGAACTGGCCTATACCATCGCAGATGGGTTGGAGTACTGCAGAACTGGACTCCAGGCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCTGTAGCAATGACCTaGGCTCCCCTGTCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPVAMT*APLSWP Trigger: TGGCCATGACAGGGGAGCCAAGGTCATTGCTACAGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 90 bp | CAGAGCCAGAATATTGCCATCTCCACTGGCAGCACACTGGGTAAGTaGACTGAGACACTGCTCAGCCAAAGCTTGATCCCTGCTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: QSQNIAISTGSTLGK*TETLLSQSLIPAGF Trigger: AAATCCAGCAGGGATCAAGCTTTGGCTGAGCAGTGTCTCAGTGCACTTACCCAGTGTGCTGCCAGTGGAGATGGCAATATTCTGGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 90 bp | ATCCGTGATTTCTCCAACTGTACATCTTGCACGAGCTGCATCCACTaGCAGAGCCAGAATATTGCCATCTCCACTGGCAGCACACTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IRDFSNCTSCTSCIH*QSQNIAISTGSTLG Trigger: ACCCAGTGTGCTGCCAGTGGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAGATGTACAGTTGGAGAAATCACGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 90 bp | TTTCAAGGCATCCGTGATTTCTCCAACTGTACATCTTGCACGAGCTaGATCCACTGCCAGAGCCAGAATATTGCCATCTCCACTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQGIRDFSNCTSCTS*IHCQSQNIAISTGS Trigger: GCTGCCAGTGGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAGATGTACAGTTGGAGAAATCACGGATGCCTTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCTCCTTCGGCACACCTaGCTCTTCCCCAGTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGLLRHT*LFPSYY Trigger: ATAGTAACTGGGGAAGAGCAAGGTGTGCCGAAGGAG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 90 bp | AGCAATGACCTTGGCTCCCCTGTCATGGCCATCTTGTCCCATTTTTaGCACAAGAAGACGAGGTCTGCGACCTTCACGTTCCATGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SNDLGSPVMAILSHF*HKKTRSATFTFHEF Trigger: AAATTCATGGAACGTGAAGGTCGCAGACCTCGTCTTCTTGTGGCAAAAATGGGACAAGATGGCCATGACAGGGGAGCCAAGGTCATTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CCA 90 bp | ATTCTGGGTGAAGGGGTTGCTGCTGGTGTAGAAGGCGTTTCCATCTaGAAGCTGATGGAATGTTTAGCTGCTTCAGGTAATGGGGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: ILGEGVAAGVEGVSI*KLMECLAASGNGAI Trigger: TATCGCCCCATTACCTGAAGCAGCTAAACATTCCATCAGCTTCCAGATGGAAACGCCTTCTACACCAGCAGCAACCCCTTCACCCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 90 bp | GACTGCTGCTTCTCTGCCAAACACTTCTCAATATCATCAAGCACTTaGACAGCAGCTCTTGGAATCCGGGTTCCAGGACCAAAGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DCCFSAKHFSISSST*TAALGIRVPGPKTL Trigger: CAACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCAGAGAAGCAGCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCTTTCAGCTGCTTTTaGGCCAGTACAGCCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPFSCF*ASTAHS Trigger: AGAATGGGCTGTACTGGCCAAAAAGCAGCTGAAAGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCTTCAGCTACAGCTTaGGCCATTCCACCCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPSATA*AIPPIS Trigger: AGAAATGGGTGGAATGGCCAAAGCTGTAGCTGAAGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 90 bp | AGCAACTCCAGCCATTCCAACATCTCCACGAACTCTGGGGTTGTCTaGATCATAACCACGATGTGTTGCCAAGTCAAAGGCAACAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SNSSHSNISTNSGVV*IITTMCCQVKGNRQ Trigger: TTGTCTGTTGCCTTTGACTTGGCAACACATCGTGGTTATGATTCAGACAACCCCAGAGTTCGTGGAGATGTTGGAATGGCTGGAGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 90 bp | CAACTTCATATATCAACTTCAGAGCAGCCTCATAAACGTCATTTGTaGGCGACTCCATCATGTACGACCCTCCCCAAGGATCCGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QLHISTSEQPHKRHL*ATPSCTTLPKDPPL Trigger: AAGTGGCGGATCCTTGGGGAGGGTCGTACATGATGGAGTCGCTCACAAATGACGTTTATGAGGCTGCTCTGAAGTTGATATATGAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS CCA 90 bp | TGCCAAACACTTCTCAATATCATCAAGCACTTGGACAGCAGCTCTTaGAATCCGGGTTCCAGGACCAAAGACGTTGGAAACACCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CQTLLNIIKHLDSSS*NPGSRTKDVGNTNF Trigger: GAAGTTGGTGTTTCCAACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTAGAATCTATTCTAGCTaGTCTTCGGGCAGCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGRIYSS*SSGSTF Trigger: GAATGTGCTGCCCGAAGACAAGCTAGAATAGATTCT...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTCCATCAAATAGGATTTaGGTGTCTTCTACAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGPSNRI*VSSTVS Trigger: TGACACTGTAGAAGACACCAAAATCCTATTTGATGG...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | ACACAATCCTGGAAGGCCTATCTACCATGTCCCCTATTCCATTGTACAGGGGGTGTGCTGTGCTGTGTATaGGAAAATGTCAGCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: TQSWKAYLPCPLFHCTGGVLCCV*ENVSNN Trigger: ATTATTGCTGACATTTTCCAATACACAGCACAGCAC...ACCCCCTGTACAATGGAATAGGGGACATGGTAGATAGGCCTTCCAGGATTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTACAGGGGGTGATAAACACTACTTTTATTGAAGCAATAGTAGGTCTGGCTCAAGGATCCGCCACTTaGGGGATCCCAGATTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVQGVINTTFIEAIVGLAQGSAT*GIPDSS Trigger: GGAAGAATCTGGGATCCCCAAAGTGGCGGATCCTTG...AGCCAGACCTACTATTGCTTCAATAAAAGTAGTGTTTATCACCCCCTGTACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTAGGGCGGTGAGTTCTTaGATAAGCTCAGGAACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVITKDPDVTQTAASVITRAVSS*ISSGTR Trigger: CCTCGTTCCTGAGCTTATCAAAGAACTCACCGCCCT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCCTGTCATGGCCATCTaGTCCCATTTTTGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVITKDPDVTQTAASVITPVMAI*SHFCHK Trigger: CTTGTGGCAAAAATGGGACAAGATGGCCATGACAGG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS GCA 90 bp | GATGGCAGATGTGATCTCTTTACTTTCTCCAAACTCCTGCCGATATaGTCCACTCACCATACGATCATTAGCTTTATGCTCACCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: DGRCDLFTFSKLLPI*STHHTIISFMLTKY Trigger: GTATTTGGTGAGCATAAAGCTAATGATCGTATGGTGAGTGGAGCATATCGGCAGGAGTTTGGAGAAAGTAAAGAGATCACATCTGCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
||
| CDS GCA 90 bp | ACTCTCTTGATGGCAGATGTGATCTCTTTACTTTCTCCAAACTCCTaGCGATATGCTCCACTCACCATACGATCATTAGCTTTATGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLMADVISLLSPNS*RYAPLTIRSLALCS Trigger: TGAGCATAAAGCTAATGATCGTATGGTGAGTGGAGCATATCGGCAGGAGTTTGGAGAAAGTAAAGAGATCACATCTGCCATCAAGAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCATAACCACGATGTGTaGCCAAGTCAAAGGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SVITKDPDVTQTAASVITHNHDV*PSQRQQ Trigger: CTGTTGCCTTTGACTTGGCAACACATCGTGGTTATG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTCTGCTCAGCCAAAGCTaGATCCCTGCTGGATTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVITKDPDVTQTAASVITLLSQS*IPAGFN Trigger: ATTAAATCCAGCAGGGATCAAGCTTTGGCTGAGCAG...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
||
| CDS TCA 90 bp | GCTGGATTTAATCTTCTTGAGTTTTTCAATCTGCTTCTTACGCACTaGAGTGTTGTCAATGGCCAGGACCTCCACAGAGTCTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGFNLLEFFNLLLTH*SVVNGQDLHRVFFF Trigger: GAAAAAGAAGACTCTGTGGAGGTCCTGGCCATTGACAACACTTCAGTGCGTAAGAAGCAGATTGAAAAACTCAAGAAGATTAAATCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 90 bp | ATTGTCCTTATAGAATTTATTGCTTTCTTCCACAGTACTAAAGCCTaGATACTGACGGATGGTCCAGGGCCTATAGGTATACATGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVLIEFIAFFHSTKA*ILTDGPGPIGIHGR Trigger: CCTACCATGTATACCTATAGGCCCTGGACCATCCGTCAGTATGCAGGCTTTAGTACTGTGGAAGAAAGCAATAAATTCTATAAGGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS-3UTR CAA 90 bp | TCGGTCATAACTAAAGATCCAGATGTTACACAGACTGCTGCTTCAGTCATAACTAATATCATCAAGCACTaGGACAGCAGCTCTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVITKDPDVTQTAASVITNIIKH*DSSSWN Trigger: ATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATT...AGTTATGACTGAAGCAGCAGTCTGTGTAACATCTGGATCTTTAGTTATGACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | AGCAGCAAGTGTGCTGACACCCACAGCATGGACATCTaGATCCACAGCTTGCTGCGCCACTTCACGGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSKCADTHSMDI*IHSLLRHFTGS Trigger: ACTCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAGCACACTTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CCA 72 bp | TGGTGGAATCACGCCCCCACACATGACAAGGATATCTaGCCGCCCCAGGGCGGTGAGTTCTTTGATAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WWNHAPTHDKDI*PPQGGEFFDKL Trigger: GAGCTTATCAAAGAACTCACCGCCCTGGGGCGGCCAGATATCCTTGTCATGTGTGGGGGCGTGATTCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 72 bp | GCTGACACCCACAGCATGGACATCTGCATCCACAGCTaGCTGCGCCACTTCACGGGGAGTCTGAAAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ADTHSMDICIHS*LRHFTGSLKKR Trigger: CCTCTTTTTCAGACTCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 90 bp | AGCAAGTGTGCTGACACCCACAGCATGGACATCTGCATCCACAGCTaGCTGCGCCACTTCACGGGGAGTCTGAAAAAGAGGGCCTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SKCADTHSMDICIHS*LRHFTGSLKKRAYV Trigger: GACATAGGCCCTCTTTTTCAGACTCCCCGTGAAGTGGCGCAGCAAGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAGCACACTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 72 bp | CTTGCACGAGCTGCATCCACTGCCAGAGCCAGAATATaGCCATCTCCACTGGCAGCACACTGGGTAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LARAASTARARI*PSPLAAHWVSA Trigger: TGCACTTACCCAGTGTGCTGCCAGTGGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | CTTGGCTCCCCTGTCATGGCCATCTTGTCCCATTTTTaGCACAAGAAGACGAGGTCTGCGACCTTCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSPVMAILSHF*HKKTRSATFTF Trigger: GAACGTGAAGGTCGCAGACCTCGTCTTCTTGTGGCAAAAATGGGACAAGATGGCCATGACAGGGGAGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 90 bp | ACTGTACATCTTGCACGAGCTGCATCCACTGCCAGAGCCAGAATATaGCCATCTCCACTGGCAGCACACTGGGTAAGTGCACTGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: TVHLARAASTARARI*PSPLAAHWVSALRH Trigger: GTGTCTCAGTGCACTTACCCAGTGTGCTGCCAGTGGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAGATGTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | TTCAGCTGCTTTTTGGCCAGTACAGCCCATTCTGGGTaGAGGGGTTGCTGCTGGTGTAGAAGGCGTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSCFLASTAHSG*RGCCWCRRRFH Trigger: ATGGAAACGCCTTCTACACCAGCAGCAACCCCTTCACCCAGAATGGGCTGTACTGGCCAAAAAGCAGCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | CAGGAACGAGGGTTTTATGACCAGCAGCAAGTGTGCTaGCACCCACAGCATGGACATCTGCATCCACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QERGFYDQQQVC*HPQHGHLHPQL Trigger: AAGCTGTGGATGCAGATGTCCATGCTGTGGGTGTCAGCACACTTGCTGCTGGTCATAAAACCCTCGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS GCA 72 bp | TTCTCCAACTGTACATCTTGCACGAGCTGCATCCACTaGCAGAGCCAGAATATTGCCATCTCCACTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSNCTSCTSCIH*QSQNIAISTGS Trigger: GCTGCCAGTGGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAGATGTACAGTTGGAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | TGTAGCAATGACCTTGGCTCCCCTGTCATGGCCATCTaGTCCCATTTTTGCCACAAGAAGACGAGGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSNDLGSPVMAI*SHFCHKKTRSA Trigger: CGCAGACCTCGTCTTCTTGTGGCAAAAATGGGACAAGATGGCCATGACAGGGGAGCCAAGGTCATTGCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 90 bp | AGCAAATCCTGTAGCAATGACCTTGGCTCCCCTGTCATGGCCATCTaGTCCCATTTTTGCCACAAGAAGACGAGGTCTGCGACCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: SKSCSNDLGSPVMAI*SHFCHKKTRSATFT Trigger: CGTGAAGGTCGCAGACCTCGTCTTCTTGTGGCAAAAATGGGACAAGATGGCCATGACAGGGGAGCCAAGGTCATTGCTACAGGATTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS GCA 72 bp | CTGGGTTCCTCCAAACACAGCTGCCATGGCTTCGATTaGAGTGCGGACAATGTTATTGTAAGGATCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSSKHSCHGFD*SADNVIVRILL Trigger: GAGCAGGATCCTTACAATAACATTGTCCGCACTGCAATCGAAGCCATGGCAGCTGTGTTTGGAGGAACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | AATATTGCCATCTCCACTGGCAGCACACTGGGTAAGTaGACTGAGACACTGCTCAGCCAAAGCTTGATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NIAISTGSTLGK*TETLLSQSLIP Trigger: AGGGATCAAGCTTTGGCTGAGCAGTGTCTCAGTGCACTTACCCAGTGTGCTGCCAGTGGAGATGGCAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | GATGGTCCAGGGCCTATAGGTATACATGGTAGGATATaGTCCCCGTGTGAATGGCTTCACTCCTGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DGPGPIGIHGRI*SPCEWLHSWKF Trigger: GAACTTCCAGGAGTGAAGCCATTCACACGGGGACCATATCCTACCATGTATACCTATAGGCCCTGGACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | GGAGTCCAGTTCTGCAGTACTCCAACCCATCTGCGATaGTATAGGCCAGTTCTAAAATGGCATCAGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVQFCSTPTHLR*YRPVLKWHQLL Trigger: CAGGAGCTGATGCCATTTTAGAACTGGCCTATACCATCGCAGATGGGTTGGAGTACTGCAGAACTGGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | GTGAGTTCTTTGATAAGCTCAGGAACGAGGGTTTTATaGCCAGCAGCAAGTGTGCTGACACCCACAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSLISSGTRVL*PAASVLTPTAW Trigger: CCATGCTGTGGGTGTCAGCACACTTGCTGCTGGTCATAAAACCCTCGTTCCTGAGCTTATCAAAGAACTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS GCA 72 bp | ATCCGTGATTTCTCCAACTGTACATCTTGCACGAGCTaGATCCACTGCCAGAGCCAGAATATTGCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IRDFSNCTSCTS*IHCQSQNIAIS Trigger: GGAGATGGCAATATTCTGGCTCTGGCAGTGGATGCAGCTCGTGCAAGATGTACAGTTGGAGAAATCACGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | TCTGTGTGTTCCGAGCAATCCGGGCACTTTTCACAGTaGGCAAACCCAGCGCTTCATCAAAAGAGTTCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SVCSEQSGHFSQ*ANPALHQKSSY Trigger: ATACGAACTCTTTTGATGAAGCGCTGGGTTTGCCCACTGTGAAAAGTGCCCGGATTGCTCGGAACACACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | CTGAATTGTGCCAGTGAGCTTCTCCTTCGGCACACCTaGCTCTTCCCCAGTTACTATAAATGTTGCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LNCASELLLRHT*LFPSYYKCCQD Trigger: GTCCTGGCAACATTTATAGTAACTGGGGAAGAGCAAGGTGTGCCGAAGGAGAAGCTCACTGGCACAATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | ACTGGGTTCCTCCAAACACAGCTGCCATGGCTTCGATaGCAGTGCGGACAATGTTATTGTAAGGATCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGFLQTQLPWLR*QCGQCYCKDPA Trigger: AGCAGGATCCTTACAATAACATTGTCCGCACTGCAATCGAAGCCATGGCAGCTGTGTTTGGAGGAACCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | CTTCTCTGCCAAACACTTCTCAATATCATCAAGCACTaGGACAGCAGCTCTTGGAATCCGGGTTCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LLCQTLLNIIKH*DSSSWNPGSRT Trigger: GGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 90 bp | GATGTCATTCTGAATTGTGCCAGTGAGCTTCTCCTTCGGCACACCTaGCTCTTCCCCAGTTACTATAAATGTTGCCAGGACTGGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVILNCASELLLRHT*LFPSYYKCCQDWDD Trigger: GTCATCCCAGTCCTGGCAACATTTATAGTAACTGGGGAAGAGCAAGGTGTGCCGAAGGAGAAGCTCACTGGCACAATTCAGAATGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 90 bp | AGACTGCTGCTTCTCTGCCAAACACTTCTCAATATCATCAAGCACTaGGACAGCAGCTCTTGGAATCCGGGTTCCAGGACCAAAGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLLLLCQTLLNIIKH*DSSSWNPGSRTKDV Trigger: AACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCAGAGAAGCAGCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | AGCCATTCCAACATCTCCACGAACTCTGGGGTTGTCTaGATCATAACCACGATGTGTTGCCAAGTCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHSNISTNSGVV*IITTMCCQVKG Trigger: GCCTTTGACTTGGCAACACATCGTGGTTATGATTCAGACAACCCCAGAGTTCGTGGAGATGTTGGAATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | GAAGGGGTTGCTGCTGGTGTAGAAGGCGTTTCCATCTaGAAGCTGATGGAATGTTTAGCTGCTTCAGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: EGVAAGVEGVSI*KLMECLAASGN Trigger: ATTACCTGAAGCAGCTAAACATTCCATCAGCTTCCAGATGGAAACGCCTTCTACACCAGCAGCAACCCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | CTTCTCAATATCATCAAGCACTTGGACAGCAGCTCTTaGAATCCGGGTTCCAGGACCAAAGACGTTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLNIIKHLDSSS*NPGSRTKDVGN Trigger: GTTTCCAACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | TTCTCTGCCAAACACTTCTCAATATCATCAAGCACTTaGACAGCAGCTCTTGGAATCCGGGTTCCAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: FSAKHFSISSST*TAALGIRVPGP Trigger: TGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 90 bp | CTGCCAAACACTTCTCAATATCATCAAGCACTTGGACAGCAGCTCTaGGAATCCGGGTTCCAGGACCAAAGACGTTGGAAACACCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: LPNTSQYHQALGQQL*ESGFQDQRRWKHQL Trigger: AAGTTGGTGTTTCCAACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGTGTTTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | ATATCAACTTCAGAGCAGCCTCATAAACGTCATTTGTaGGCGACTCCATCATGTACGACCCTCCCCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ISTSEQPHKRHL*ATPSCTTLPKD Trigger: ATCCTTGGGGAGGGTCGTACATGATGGAGTCGCTCACAAATGACGTTTATGAGGCTGCTCTGAAGTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | TTAAGTGAGCCCACAGTCTTCTCCCAGCTCGCATCTTaGCTATTTCCATGTAGAAGTTCATTCCAATTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSEPTVFSQLAS*LFPCRSSFQFP Trigger: GGGGAATTGGAATGAACTTCTACATGGAAATAGCCAAGATGCGAGCTGGGAGAAGACTGTGGGCTCACTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | ACTTCTCAATATCATCAAGCACTTGGACAGCAGCTCTaGGAATCCGGGTTCCAGGACCAAAGACGTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSQYHQALGQQL*ESGFQDQRRWK Trigger: TTTCCAACGTCTTTGGTCCTGGAACCCGGATTCCAAGAGCTGCTGTCCAAGTGCTTGATGATATTGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | TCAAAACCAAGATCAGCAAATCCTGTAGCAATGACCTaGGCTCCCCTGTCATGGCCATCTTGTCCCATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKPRSANPVAMT*APLSWPSCPIF Trigger: AAAAATGGGACAAGATGGCCATGACAGGGGAGCCAAGGTCATTGCTACAGGATTTGCTGATCTTGGTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS TCA 72 bp | GTATTTCTGACCATAAACTCCTTTAGGATGTCATTCTaGATTGTGCCAGTGAGCTTCTCCTTCGGCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLTINSFRMSF*IVPVSFSFGTP Trigger: AGGTGTGCCGAAGGAGAAGCTCACTGGCACAATTCAGAATGACATCCTAAAGGAGTTTATGGTCAGAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS TCA 72 bp | AATCTTCTTGAGTTTTTCAATCTGCTTCTTACGCACTaGAGTGTTGTCAATGGCCAGGACCTCCACAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NLLEFFNLLLTH*SVVNGQDLHRV Trigger: GACTCTGTGGAGGTCCTGGCCATTGACAACACTTCAGTGCGTAAGAAGCAGATTGAAAAACTCAAGAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | ATGGCAGATGTGATCTCTTTACTTTCTCCAAACTCCTaGCGATATGCTCCACTCACCATACGATCATTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MADVISLLSPNS*RYAPLTIRSLA Trigger: AGCTAATGATCGTATGGTGAGTGGAGCATATCGGCAGGAGTTTGGAGAAAGTAAAGAGATCACATCTGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CCA 72 bp | TTTCAATCTGCTTCTTACGCACTGAAGTGTTGTCAATaGCCAGGACCTCCACAGAGTCTTCTTTTTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: FQSASYALKCCQ*PGPPQSLLFPT Trigger: AGTTGGAAAAAGAAGACTCTGTGGAGGTCCTGGCCATTGACAACACTTCAGTGCGTAAGAAGCAGATTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | TGTGATCTCTTTACTTTCTCCAAACTCCTGCCGATATaGTCCACTCACCATACGATCATTAGCTTTATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CDLFTFSKLLPI*STHHTIISFML Trigger: GAGCATAAAGCTAATGATCGTATGGTGAGTGGAGCATATCGGCAGGAGTTTGGAGAAAGTAAAGAGATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169611.4 ENSMUST00000233222.2 |
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| CDS CAA 72 bp | TTGAGTTTTTCAATCTGCTTCTTACGCACTGAAGTGTaGTCAATGGCCAGGACCTCCACAGAGTCTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSFSICFLRTEV*SMARTSTESSF Trigger: AAAAGAAGACTCTGTGGAGGTCCTGGCCATTGACAACACTTCAGTGCGTAAGAAGCAGATTGAAAAACTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS GCA 72 bp | ATAGAATTTATTGCTTTCTTCCACAGTACTAAAGCCTaGATACTGACGGATGGTCCAGGGCCTATAGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: IEFIAFFHSTKA*ILTDGPGPIGI Trigger: TATACCTATAGGCCCTGGACCATCCGTCAGTATGCAGGCTTTAGTACTGTGGAAGAAAGCAATAAATTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CCA 72 bp | AGTTCTAAAATGGCATCAGCTCCTGCTTCCTGCATATaGTACCCGCTAATCGAAATGGAATTAAATTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSKMASAPASCI*YPLIEMELNFG Trigger: GCCAAAATTTAATTCCATTTCGATTAGCGGGTACCATATGCAGGAAGCAGGAGCTGATGCCATTTTAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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| CDS CAA 72 bp | TCCAACAATTACCTCAGAACCAGAATCTATTCTAGCTaGTCTTCGGGCAGCACATTCTTCAATGCGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNNYLRTRIYSS*SSGSTFFNAKF Trigger: AAACTTCGCATTGAAGAATGTGCTGCCCGAAGACAAGCTAGAATAGATTCTGGTTCTGAGGTAATTGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169611.4 |
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