Pregenerated sensors for MMS22L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045751Ensembl transcript IDs: ENSMUST00000050446.13, ENSMUST00000108222.9, ENSMUST00000131282.4, ENSMUST00000138567.9, ENSMUST00000154496.3, ENSMUST00000172622.8
Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTGAAGAGCTaGAGGACGAAGGCCAATACGGATGCTAATCGAGGAGGGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SSSRSQAPISVSLKS*RTKANTDANRGGGE Trigger: CTCACCCCCTCCTCGATTAGCATCCGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 90 bp | AACAGAGAAGTCAGCTGGGTGGCAGGTCCTCCTTCTGACCCCACTTaGCAGGTTTGTACCATGCACTGCAGGTTCTCTGTGGCCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NREVSWVAGPPSDPT*QVCTMHCRFSVASF Trigger: AAAGCTGGCCACAGAGAACCTGCAGTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 90 bp | CAGGAAGGAGCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTaGAGAGCTGAAGGACGAAGGCCAATACGGATGCTAATCGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QEGAAQGHRHPFRCP*RAEGRRPIRMLIEE Trigger: CTCCTCGATTAGCATCCGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGCTCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 90 bp | CCGGCTTCACCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATaGTGGGATTACCGGTTTGTATCACCAGGCCCAGCTTGTGGACAC | + |
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Preference number: 1 (lower is better) Translates to: PASPSTLPTVFCHLE*WDYRFVSPGPACGH Trigger: GTGTCCACAAGCTGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 90 bp | TTGCCAGTTGGCATGTGTTCTAGTTACCTAAACAGAGAAGTCAGCTaGGTGGCAGGTCCTCCTTCTGACCCCACTTGGCAGGTTTGTACC | + |
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Preference number: 1 (lower is better) Translates to: LPVGMCSSYLNREVS*VAGPPSDPTWQVCT Trigger: GGTACAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTCTGTTTAGGTAACTAGAACACATGCCAACTGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 90 bp | GCTTCACCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATGCTaGGATTACCGGTTTGTATCACCAGGCCCAGCTTGTGGACACTTG | + |
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Preference number: 1 (lower is better) Translates to: ASPSTLPTVFCHLEC*DYRFVSPGPACGHL Trigger: CAAGTGTCCACAAGCTGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 90 bp | GGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTaGTTCTGTTTCTTCCTTCTCAACTATAGTCAAGGTTCTTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GQPPNACAPVVRTYT*FCFFLLNYSQGSFP Trigger: TGGGAAAGAACCTTGACTATAGTTGAGAAGGAAGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 90 bp | GTTTGTACCATGCACTGCAGGTTCTCTGTGGCCAGCTTTTTAACTTaGGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VCTMHCRFSVASFLT*GSFTNTKHFRMPGR Trigger: CCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTGCAGTGCATGGTACAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGGGCGGCAGGTCCTCCTTCTaGCCCCACTTGGCAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: AGGPGTGIFTQHPQEQLGGRSSF*PHLAGL Trigger: CAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCC...GCCCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGGGTTTGTACCATGCACTaGAGGTTCTCTGTGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KLEDQGQAFLPSIPKSSWVCTMH*RFSVAS Trigger: GCTGGCCACAGAGAACCTGCAGTGCATGGTACAAAC...CCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CCA 90 bp | GGTCCGGCTTCACCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATGCTGGGTGTGTAAAGCAAGCTaGAGGACCAGGGACAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GPASPSTLPTVFCHLECWVCKAS*RTRDRH Trigger: ATGCCTGTCCCTGGTCCTCCAGCTTGCTTTACACAC...CCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGCCGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTGAGAAGTCAGCTGGGTaGCAGGTCCTCCTTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: NLRMPVRLLSELTLASVSEKSAG*QVLLLT Trigger: GGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTC...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCTTCTGCCACTTAGAATGCTGGGATTACCGGTTTGTATCACCAGGCCCAGTGTCCTTGAAGAGCTaGAGGACGAAGGCCAATACG | + |
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Preference number: 2 (lower is better) Translates to: TVFCHLECWDYRFVSPGPVSLKS*RTKANT Trigger: CGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACAC...TGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR TCA 90 bp | GCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCCATTTCGGTGTCCTTaGAGAGCTGAAGGACGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ATSECLCACCQNLHLLLFPFRCP*RAEGRR Trigger: CCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGG...AAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CAA 90 bp | CATCCCCAAGAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTaGTCAGAACTTACACTTGCTTCTGTTTCTTCCTTCTCAACTATA | + |
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Preference number: 2 (lower is better) Translates to: HPQEQLGNLRMPVRL*SELTLASVSSFSTI Trigger: TATAGTTGAGAAGGAAGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTCTTGGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCCAGCTTTTTAACTTaGGGTTCATTTACCAACACC | + |
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Preference number: 2 (lower is better) Translates to: EQLGNLRMPVRLLSELTLASFLT*GSFTNT Trigger: GGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGC...AAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CAA 90 bp | GGTTTGTACCATGCACTGCAGGTTCTCTGTGGCCAGCTTTTTAACTaGGGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GLYHALQVLCGQLFN*GFIYQHQTFQDARK Trigger: CTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTGCAGTGCATGGTACAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACACAACCACTGCCCGGCAGGTTTGTACCATaGACTGCAGGTTCTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LGTFTFSTKQHNVTQPLPGRFVP*TAGSLW Trigger: CCACAGAGAACCTGCAGTGCATGGTACAAACCTGCC...GGGCAGTGGTTGTGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTAATCACAGTAGCAGCTaGGGTAGCCCACAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QCSLCPIIQLLISLHSSCNHSSS*GSPQSC Trigger: ACAGCTCTGTGGGCTACCCCAGCTGCTACTGTGATT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| 3UTR CAA 90 bp | TATTTAAAAAGAATGTTGGCTGTCAAATGGCTGGCAATCGTCTCCTaGCCAGTTGGCATGTGTTCTAGTTACCTAAACAGAGAAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: YLKRMLAVKWLAIVS*PVGMCSSYLNREVS Trigger: GCTGACTTCTCTGTTTAGGTAACTAGAACACATGCCAACTGGCAAGGAGACGATTGCCAGCCATTTGACAGCCAACATTCTTTTTAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTAATCACAGTAGCAGCTaGGGTAGCCCACAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVNHSSS*GSPQSC Trigger: ACAGCTCTGTGGGCTACCCCAGCTGCTACTGTGATT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| 3UTR CCA 72 bp | GGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTaGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GQAFLPSIPKSS*ATSECLCACCQ Trigger: CTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 72 bp | AAACAGAGAAGTCAGCTGGGTGGCAGGTCCTCCTTCTaGCCCCACTTGGCAGGTTTGTACCATGCACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KQRSQLGGRSSF*PHLAGLYHALQ Trigger: CTGCAGTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 72 bp | CCCAGCATCCCCAAGAGCAGTTGGGCAACCTCCGAATaGCTGTGCGCCTGTTGTCAGAACTTACACTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: PSIPKSSWATSE*LCACCQNLHLL Trigger: AAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTCTTGGGGATGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 72 bp | GCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTaGAGAGCTGAAGGACGAAGGCCAATACGGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: AAQGHRHPFRCP*RAEGRRPIRML Trigger: TAGCATCCGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 72 bp | GGCATGTGTTCTAGTTACCTAAACAGAGAAGTCAGCTaGGTGGCAGGTCCTCCTTCTGACCCCACTTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GMCSSYLNREVS*VAGPPSDPTWQ Trigger: CTGCCAAGTGGGGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTCTGTTTAGGTAACTAGAACACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 72 bp | AGGTCACAGGCACCCATTTCGGTGTCCTTGAAGAGCTaGAGGACGAAGGCCAATACGGATGCTAATCGAGGA | + |
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Preference number: 3 (lower is better) Translates to: RSQAPISVSLKS*RTKANTDANRG Trigger: TCCTCGATTAGCATCCGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGGGTGCCTGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 72 bp | ATCCCCAAGAGCAGTTGGGCAACCTCCGAATGCCTGTaGGCCTGTTGTCAGAACTTACACTTGCTTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: IPKSSWATSECL*ACCQNLHLLLF Trigger: AAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTCTTGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 72 bp | CCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATaGTGGGATTACCGGTTTGTATCACCAGGCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PSTLPTVFCHLE*WDYRFVSPGPA Trigger: AGCTGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR GCA 72 bp | GGTCCGGCTTCACCTTCAACACTACCCACTGTCTTCTaGCACTTAGAATGCTGGGATTACCGGTTTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: GPASPSTLPTVF*HLECWDYRFVS Trigger: TGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGCCGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 72 bp | AAGGAGCGTTCTGAAACGTTAGTGTGTAAAGCAAGCTaGAGGACCAGGGACAGGCATTTTTACCCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: KERSETLVCKAS*RTRDRHFYPAS Trigger: GGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTTGCTTTACACACTAACGTTTCAGAACGCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 72 bp | AAACCTCATGTCAAATTGTGCCAGGGCAGGAATATATaGCAGGATTCACAAAAGCTACCCGGCAGAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: KPHVKLCQGRNI*QDSQKLPGRAL Trigger: CAGGGCTCTGCCGGGTAGCTTTTGTGAATCCTGTCATATATTCCTGCCCTGGCACAATTTGACATGAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTAGCTTACCTTTTTCCTaGGCACGTTTACTTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: EQLGNLRMPVRLLSELTLSLPFS*ARLLFQ Trigger: TTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAGCT...AAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACACAACCACTGCCCTCGTCTCCTTGCCAGTaGGCATGTGTTCTAGTTACC | + |
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Preference number: 3 (lower is better) Translates to: LGTFTFSTKQHNVTQPLPSSPCQ*ACVLVT Trigger: GGTAACTAGAACACATGCCAACTGGCAAGGAGACGA...GGGCAGTGGTTGTGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR CCA 72 bp | ATGCACTGCAGGTTCTCTGTGGCCAGCTTTTTAACTTaGGGTTCATTTACCAACACCAAACATTTCAGGATG | + |
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Preference number: 3 (lower is better) Translates to: MHCRFSVASFLT*GSFTNTKHFRM Trigger: CATCCTGAAATGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTGCAGTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| 3UTR TCA 72 bp | CACTTCCTACATGCAGGCAATGAAGGGAATTATTTGTaGTACAACAGTACACAATTAATCACAGTAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: HFLHAGNEGNYL*YNSTQLITVAA Trigger: AGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCTTCATTGCCTGCATGTAGGAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| 3UTR TCA 72 bp | ATGTTCTATCATAAAGTGACCATAACTGAAATGAACTaGGAACAGCAGACAAGCACCAATTATGAGGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: MFYHKVTITEMN*EQQTSTNYEAR Trigger: TCTCGCCTCATAATTGGTGCTTGTCTGCTGTTCTCAGTTCATTTCAGTTATGGTCACTTTATGATAGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGGCAGGTCCTCCTTCTaGCCCCACTTGGCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAGRSSF*PHLAGL Trigger: CAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR GCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATCTGCAGCGGCATCTaGAAGCTGGGAGAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAICSGI*KLGERH Trigger: GTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR CCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGCTCATCGACCAACATaGAGGGAAGCTGGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAAHRPT*REAGLP Trigger: TGGAAGCCCAGCTTCCCTCCATGTTGGTCGATGAGC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR CCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCGAGAAGTCAGCTGGGTaGCAGGTCCTCCTTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVEKSAG*QVLLLT Trigger: GGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTC...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCACTTGCTTCCAAGGGTaGGGGCCGCTGGTTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVTCFQG*GPLVLI Trigger: AATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGT...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATAACTGGCTGTGGCTaGAGATCTGGTGGTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAITGCG*RSGGAV Trigger: CACAGCACCACCAGATCTTCAGCCACAGCCAGTTAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGGGCATCTGCAGCGGCATCTaGAAGCTGGGAGAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AGGPGTGIFTQHPQEQLGICSGI*KLGERH Trigger: GTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGAT...GCCCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
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| CDS-3UTR GCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGGCAGCTCCTTGTCTTaGTGTAGCACTGTATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSGSSLS*CSTVCG Trigger: GCCACATACAGTGCTACAGCAAGACAAGGAGCTGCC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR GCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGTTTGTACCATGCACTaGAGGTTCTCTGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSVCTMH*RFSVAS Trigger: GCTGGCCACAGAGAACCTGCAGTGCATGGTACAAAC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
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| CDS-3UTR CCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCCCTTCTGACCCCACTTaGCAGGTTTGTACCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSPSDPT*QVCTMH Trigger: GTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGG...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCGTGTCCTTGAAGAGCTaGAGGACGAAGGCCAATACG | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVVSLKS*RTKANT Trigger: CGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACAC...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCCCATTTCGGTGTCCTTaGAGAGCTGAAGGACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVPFRCP*RAEGRR Trigger: CCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGG...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATGGATGACAACGTGCTaGTTCAGCGTTGCTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAWMTTC*FSVATV Trigger: GACAGTAGCAACGCTGAATCAGCACGTTGTCATCCA...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGCCCCATTTGAGCTCTaGATCCTTCAGAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSAPFEL*ILQRLS Trigger: ACTCAGTCTCTGAAGGATTCAGAGCTCAAATGGGGC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGCGACTGTGGCTCTCTaGTTCCTGTACTTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAATVAL*FLYFQT Trigger: TGTCTGAAAGTACAGGAAGCAGAGAGCCACAGTCGC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGCGACTGTGGCTCTCTaGTTCCTGTACTTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSATVAL*FLYFQT Trigger: TGTCTGAAAGTACAGGAAGCAGAGAGCCACAGTCGC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCACTGAAGATCTGGTGGTaGTGTGTTTGGCATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAALKIWW*CVWHVH Trigger: GTGGACATGCCAAACACAGCACCACCAGATCTTCAG...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGCCAACAGAACAGGGTaGTGTCCCAGATCTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSANRTG*CPRSET Trigger: TGTTTCAGATCTGGGACAGCACCCTGTTCTGTTGGC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCTGGATGACAACGTGCTaGTTCAGCGTTGCTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVWMTTC*FSVATV Trigger: GACAGTAGCAACGCTGAATCAGCACGTTGTCATCCA...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| 3UTR CAA 72 bp | GGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTaGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGIFTQHPQEQ*GNLRMPVRLLS Trigger: TGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCTCCCAAAATCACAGCTaGCTTGTACCAAGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVSQNHS*LVPRTP Trigger: TGGAGTCCTTGGTACAAGTCAGCTGTGATTTTGGGA...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGACATGGAGGCAGGCCTaGGGAAACGAAGGAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QAGGPGTGIFTQHPQEQLTWRQA*GNEGGL Trigger: TAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGT...CAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATATGCTTCCCTTTGTaGAATATTTCTGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAICFPL*NISAEA Trigger: GGCCTCGGCAGAAATATTGCACAAAGGGAAGCATAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGGTAGGATTTCCTTATaGCATGGACAGTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSGRISL*HGQCAF Trigger: GAAAGCACACTGTCCATGCCATAAGGAAATCCTACC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATTGAGAAGATGCTCATaGGAAGGATACAAGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAALRRCS*EGYKQL Trigger: CAGTTGCTTGTATCCTTCTCATGAGCATCTTCTCAA...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCCAACTTGGGGCCAGATaGTATCATCCCAACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVQLGAR*YHPNQK Trigger: TTTTTGGTTGGGATGATATCATCTGGCCCCAAGTTG...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGGTAATTGCTCTATTTaGGCCTTTGAGAAGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSGNCSI*AFEKTL Trigger: GAGTGTCTTCTCAAAGGCTCAAATAGAGCAATTACC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCCTATGTACTGCTCAATaGCATTCCTCAGCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSLCTAQ*HSSATD Trigger: ATCAGTTGCTGAGGAATGTCATTGAGCAGTACATAG...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCACTATGTACTGCTCAATaGCATTCCTCAGCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAALCTAQ*HSSATD Trigger: ATCAGTTGCTGAGGAATGTCATTGAGCAGTACATAG...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCACTTGTGTCATTCTCTaGCTCTTGAGAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSTCVIL*LLRKEK Trigger: CTTTTCCTTTCTCAAGAGTCAGAGAATGACACAAGT...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGTCCGGCTTCACCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATGCTGGATAACTGGCTGTGGCTaGAGATCTGGTGGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPASPSTLPTVFCHLECWITGCG*RSGGAV Trigger: CACAGCACCACCAGATCTTCAGCCACAGCCAGTTAT...CCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGCCGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCAGAAGACACGCAACTTaGCTGAGAAAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVRRHAT*LRKCFI Trigger: TATGAAGCACTTTCTCAGTCAAGTTGCGTGTCTTCT...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCCTCTATTTGAGCCTTTaGGAAGACACTCTTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSLYLSL*EDTLYF Trigger: GAAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAG...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATTCTAAGGACTTTGTaGCCATGGCAGATTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAILRTL*PWQIYQ Trigger: CTGATAAATCTGCCATGGTCACAAAGTCCTTAGAAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCATACATCAGGAGAAATaGCATCTGACCCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVIHQEK*HLTLPN Trigger: GTTTGGAAGGGTCAGATGGCATTTCTCCTGATGTAT...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCACACCATCAATATAGATaGAAAGCAGTGTCCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAHHQYR*KAVSIE Trigger: CTCTATGGACACTGCTTTGCATCTATATTGATGGTG...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGGCAGCTCCTTGTCTTaGTGTAGCACTGTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQLGNLRMPVRLLSELTLGSSLS*CSTVCG Trigger: GCCACATACAGTGCTACAGCAAGACAAGGAGCTGCC...AAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGGAGGTCTAAAACATaGCTTGCTACATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSRRSKT*LATSSI Trigger: GATAGAAGATGTAGCAAGCCATGTTTTAGACCTCCT...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGATTTCCTTATGGCATaGACAGTGTGCTTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAADFLMA*TVCFLR Trigger: TCTAAGAAAGCACACTGTCCATGCCATAAGGAAATC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCCAACCAATTCCAAAATaGATCTGCAACAGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSQPIPK*ICNRPF Trigger: AAATGGTCTGTTGCAGATTCATTTTGGAATTGGTTG...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCTCTTCGTTGGTCACTTaGCTTTTCAAAAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSSSLVT*LFKKCS Trigger: AGAACACTTTTTGAAAAGTCAAGTGACCAACGAAGA...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCAAACAAGGGCTCCATaGGATGACATGGAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSECLCACCQNLHLLLFQTRAP*DDMEAG Trigger: GCCTGCCTCCATGTCATCTCATGGAGCCCTTGTTTG...AAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGTGTCAAACAACAATaGAGATGCATTCGCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSSVKQQ*RCIRNC Trigger: ACAATTGCGAATGCATCTTCATTGTTGTTTGACACT...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCGAGAGGTGTTTTATGTaGATTTGCAAAACACAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVERCFM*ICKTQR Trigger: CCGTTGTGTTTTGCAAATGCACATAAAACACCTCTC...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCAGGAGGTCTAAAACATaGCTTGCTACATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVRRSKT*LATSSI Trigger: GATAGAAGATGTAGCAAGCCATGTTTTAGACCTCCT...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATGTCCAAGTTTTTCTaGGCATACATCAGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAMSKFF*AYIRRN Trigger: ATTTCTCCTGATGTATGCCCAGAAAAACTTGGACAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCCTTTGCTTTCTCTTaGAATTCACATGACAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAASFAFS*NSHDSF Trigger: GAAACTGTCATGTGAATTCCAAGAGAAAGCAAAGGA...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCTACAATGATGCTACATaGACACTAATCCACCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVYNDAT*TLIHQL Trigger: TAGTTGGTGGATTAGTGTTCATGTAGCATCATTGTA...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAACAGAAGATCTTCGTTaGTCACTTGACTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVAHRAVDRDLPGRKAAATEDLR*SLDFSK Trigger: TTTTGAAAAGTCAAGTGACCAACGAAGATCTTCTGT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCACAGAAGATCTTCGTTaGTCACTTGACTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSTEDLR*SLDFSK Trigger: TTTTGAAAAGTCAAGTGACCAACGAAGATCTTCTGT...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGAATGGATCCTTGGCCTaGGTTAGAGACACAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAGGPGTGIFTQHPQEQLNGSLA*VRDTED Trigger: ATCTTCTGTGTCTCTAACCCAGGCCAAGGATCCATT...CAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCGATACAAGCAACTGCTaGTCTCAAATACTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVDTSNC*SQILLE Trigger: TTCAAGAAGTATTTGAGACCAGCAGTTGCTTGTATC...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTGCGGCATCTGCAAGCTaGGAGAGAGGCACAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMPVRLLSELTLASVSAASAS*ERGTTC Trigger: ACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGC...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| 3UTR CAA 72 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTaGTCAGAACTTACACTTGCTTCTGTTTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQLGNLRMPVRL*SELTLASVSSF Trigger: GAAGGAAGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACACATGGAGGCAGGCCTaGGGAAACGAAGGAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHTWRQA*GNEGGL Trigger: TAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGTTGAGAAGATGCTCATaGGAAGGATACAAGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGGPGTGIFTQHPQEQLLRRCS*EGYKQL Trigger: CAGTTGCTTGTATCCTTCTCATGAGCATCTTCTCAA...CAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCTACCAAGAATTCCTTTaGTTTCTCTTGGAATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVYQEFL*FLLEFT Trigger: TGTGAATTCCAAGAGAAAGCAAAGGAATTCTTGGTA...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGTTTGGCATGTCCACTaGCAGCAAAGTAAAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQLGNLRMPVRLLSELTLVWHVH*QQSKIC Trigger: GCAGATTTTACTTTGCTGGCAGTGGACATGCCAAAC...AAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGCGGCATCTGCAAGCTaGGAGAGAGGCACAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHAASAS*ERGTTC Trigger: ACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAGGATGCCAGGAAGGAGCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTCAACCAATTCCAAAATaGATCTGCAACAGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QDARKEQLKVTGTHFGVLQPIPK*ICNRPF Trigger: AAATGGTCTGTTGCAGATTCATTTTGGAATTGGTTG...AAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGCTCCTTCCTGGCATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGGGGTGAGGACCCTTTaGACTCAAGGTAGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHGVRTL*TQGRIS Trigger: GGAAATCCTACCTTGAGTTCAAAGGGTCCTCACCCC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGCTGAAGATCTGGTGGTaGTGTGTTTGGCATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKLKIWW*CVWHVH Trigger: GTGGACATGCCAAACACAGCACCACCAGATCTTCAG...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGAGCCTAATGGATCCTTaGCCTGGGTTAGAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKSLMDP*PGLETQ Trigger: CTGTGTCTCTAACCCAGGCCAAGGATCCATTAGGCT...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCTGACCCCACTTGGCAGGTTTGTACCATGCACTGCAGGTTCTCTGTGGTCTTCGTTGGTCACTTaGCTTTTCAAAAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTPLGRFVPCTAGSLWSSLVT*LFKKCS Trigger: AGAACACTTTTTGAAAAGTCAAGTGACCAACGAAGA...CCACAGAGAACCTGCAGTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGCTGATGAACACTCCTaGTTCTCGCCAGAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHADEHS*FSPEQL Trigger: AAGCTGTTCTGGCGAGAATCAGGAGTGTTCATCAGC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATACCTGCAGCGGCATCTaGAAGCTGGGAGAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQAKHTQFKHVICPIICHTCSGI*KLGERH Trigger: GTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGGT...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR CCA 90 bp | CAGGATGCCAGGAAGGAGCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTACAGAAGATCTTCGTTaGTCACTTGACTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDARKEQLKVTGTHFGVLTEDLR*SLDFSK Trigger: TTTTGAAAAGTCAAGTGACCAACGAAGATCTTCTGT...AAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGCTCCTTCCTGGCATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | ACTGTCTTCTGCCACTTAGAATGCTGGGATTACCGGTTTGTATCACCAGGCCCAAGAAGACACGCAACTTaGCTGAGAAAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TVFCHLECWDYRFVSPGPRRHAT*LRKCFI Trigger: TATGAAGCACTTTCTCAGTCAAGTTGCGTGTCTTCT...TGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCTCTGTGGCCAGCTTTTTAACTTGGGGTTCATTTACCAACACCAAACAAGAGGAAGCGTCTTCTaGATTGCAGTCAGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLCGQLFNLGFIYQHQTRGSVF*IAVSMG Trigger: ACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCT...TGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTGAAGCCAGGAAATACTaGAGGAGCTATTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMPVRLLSELTLASVSEARKY*RSYSGS Trigger: AGAACCTGAATAGCTCCTTCAGTATTTCCTGGCTTC...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTTCTGCCACTTAGAATGCTGGGATTACCGGTTTGTATCACCAGGCCCATATCTTGCTACAACTTaGGGCCAGATGATATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVFCHLECWDYRFVSPGPYLATT*GQMISS Trigger: GGATGATATCATCTGGCCCCAAGTTGTAGCAAGATA...TGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | AACCTCATGTCAAATTGTGCCAGGGCAGGAATATATGACAGGATTCACAAAAGCGAATTGCAGTCAGCATaGGTCCAGGCAGCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLMSNCARAGIYDRIHKSELQSA*VQAAPC Trigger: ACAAGGAGCTGCCTGGACCCATGCTGACTGCAATTC...GCTTTTGTGAATCCTGTCATATATTCCTGCCCTGGCACAATTTGACATGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGCTGTTTCATTTTGTCTaGCACACCATGGCGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKLFHFV*HTMAIN Trigger: ATTGATCGCCATGGTGTGTCAGACAAAATGAAACAG...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTCAAACAAGGGCTCCATaGGATGACATGGAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGQTRAP*DDMEAG Trigger: GCCTGCCTCCATGTCATCTCATGGAGCCCTTGTTTG...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACCTCTTGGAATTCACATaGCAGTTTCTCAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHLLEFT*QFLSPN Trigger: GTTTGGGCTGAGAAACTGTCATGTGAATTCCAAGAG...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AACCTCATGTCAAATTGTGCCAGGGCAGGAATATATGACAGGATTCACAAAAGCGCTGATGAACACTCCTaGTTCTCGCCAGAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLMSNCARAGIYDRIHKSADEHS*FSPEQL Trigger: AAGCTGTTCTGGCGAGAATCAGGAGTGTTCATCAGC...GCTTTTGTGAATCCTGTCATATATTCCTGCCCTGGCACAATTTGACATGAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACCAACTTGGGGCCAGATaGTATCATCCCAACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHQLGAR*YHPNQK Trigger: TTTTTGGTTGGGATGATATCATCTGGCCCCAAGTTG...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGGCAGGTCCTCCTTCTaGCCCCACTTGGCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYGRSSF*PHLAGL Trigger: CAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGAATCCTTCAGAGACTaGGTGAGGGTAGGAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHESFRD*VRVGIN Trigger: ATTGATTCCTACCCTCACTCAGTCTCTGAAGGATTC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGCCGATAATGAAGACTaGACAGTTAGGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHADNED*TVRSTF Trigger: GAATGTGGACCTAACTGTGCAGTCTTCATTATCGGC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTATCTGCAGCGGCATCTaGAAGCTGGGAGAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCICSGI*KLGERH Trigger: GTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGAT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGTTTGGCATGTCCACTaGCAGCAAAGTAAAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHVWHVH*QQSKIC Trigger: GCAGATTTTACTTTGCTGGCAGTGGACATGCCAAAC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTTGGGCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGTGCTTCATATACTGTaGTATTTTGTAGCAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EQLGNLRMPVRLLSELTLVLHIL*YFVAND Trigger: GTCATTTGCTACAAAATAGCACAGTATATGAAGCAC...AAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGCCCAACTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTGGGCAGGGCGACTGTaGCTCTCTGCTTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCWAGRL*LSASCT Trigger: AGTACAGGAAGCAGAGAGCCACAGTCGCCCTGCCCA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AAAGACATAACTAATAAGCAGATCAGAGCTTCATTTCATGCCACACATGTACCATGGGCAGGGCGACTGTaGCTCTCTGCTTCCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KDITNKQIRASFHATHVPWAGRL*LSASCT Trigger: AGTACAGGAAGCAGAGAGCCACAGTCGCCCTGCCCA...TGGTACATGTGTGGCATGAAATGAAGCTCTGATCTGCTTATTAGTTATGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTGCGGCATCTGCAAGCTaGGAGAGAGGCACAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGAASAS*ERGTTC Trigger: ACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGC...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATGCGGCATCTGCAAGCTaGGAGAGAGGCACAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQAKHTQFKHVICPIICHAASAS*ERGTTC Trigger: ACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGC...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGAGAAGTCAGCTGGGTaGCAGGTCCTCCTTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCEKSAG*QVLLLT Trigger: GGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| 3UTR CAA 72 bp | AGAATGTTGGCTGTCAAATGGCTGGCAATCGTCTCCTaGCCAGTTGGCATGTGTTCTAGTTACCTAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RMLAVKWLAIVS*PVGMCSSYLNR Trigger: TCTGTTTAGGTAACTAGAACACATGCCAACTGGCAAGGAGACGATTGCCAGCCATTTGACAGCCAACATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACTTGAGAAGATGCTCATaGGAAGGATACAAGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHLRRCS*EGYKQL Trigger: CAGTTGCTTGTATCCTTCTCATGAGCATCTTCTCAA...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGCTCTATTTGAGCCTTTaGGAAGACACTCTTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKLYLSL*EDTLYF Trigger: GAAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAG...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGTGCTGTCCCAGATCTaGAACACAGGGCGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSVLSQI*NTGRGW Trigger: CCAACCTCGCCCTGTGTTTCAGATCTGGGACAGCAC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTGGGGTGAGGACCCTTTaGACTCAAGGTAGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGGVRTL*TQGRIS Trigger: GGAAATCCTACCTTGAGTTCAAAGGGTCCTCACCCC...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCTGTCAAATGGCTGGCAATCGTCTCCTTGCCAGTTGGCATGTGTTCTAAGGATACAAGCAACTaGTGGTCTCAAATACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLAVKWLAIVSLPVGMCSKDTSN*WSQILL Trigger: AAGAAGTATTTGAGACCAGCAGTTGCTTGTATCCTT...AGAACACATGCCAACTGGCAAGGAGACGATTGCCAGCCATTTGACAGCCAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | CTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACACAACCACTGCCCCAGCAAAGTAAAATCTaGAGCGGCATCTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTFTFSTKQHNVTQPLPQQSKI*SGICKL Trigger: CAGCTTGCAGATGCCGCTGCAGATTTTACTTTGCTG...GGGCAGTGGTTGTGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGGAGAGGTGTTTTATGTaGATTTGCAAAACACAACGG | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKERCFM*ICKTQR Trigger: CCGTTGTGTTTTGCAAATGCACATAAAACACCTCTC...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTGTTTGTACCATGCACTaGAGGTTCTCTGTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGVCTMH*RFSVAS Trigger: GCTGGCCACAGAGAACCTGCAGTGCATGGTACAAAC...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | ACTAATAAGCAGATCAGAGCTTCATTTCATGCCACACATGTACCAATTCTTCTTGCTCATCGACCAACATaGAGGGAAGCTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNKQIRASFHATHVPILLAHRPT*REAGLP Trigger: TGGAAGCCCAGCTTCCCTCCATGTTGGTCGATGAGC...AAGAAGAATTGGTACATGTGTGGCATGAAATGAAGCTCTGATCTGCTTATTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTAGGAGGTCTAAAACATaGCTTGCTACATCTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: NLRMPVRLLSELTLASVSRRSKT*LATSSI Trigger: GATAGAAGATGTAGCAAGCCATGTTTTAGACCTCCT...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGGCATGTGTTCTAGTTACCTAAACAGAGAAGTCAGCTGGGTGGCAGGTTCCTTTGCTTTCTCTTaGAATTCACATGACAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVGMCSSYLNREVSWVAGSFAFS*NSHDSF Trigger: GAAACTGTCATGTGAATTCCAAGAGAAAGCAAAGGA...ACCTGCCACCCAGCTGACTTCTCTGTTTAGGTAACTAGAACACATGCCAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTGAATTGCAGTCAGCATaGGTCCAGGCAGCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGELQSA*VQAAPC Trigger: ACAAGGAGCTGCCTGGACCCATGCTGACTGCAATTC...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGCCAGCTTTTTAACTTaGGGTTCATTTACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHASFLT*GSFTNT Trigger: GGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| 3UTR CAA 72 bp | CATGCACTGCAGGTTCTCTGTGGCCAGCTTTTTAACTaGGGGTTCATTTACCAACACCAAACATTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HALQVLCGQLFN*GFIYQHQTFQD Trigger: ATCCTGAAATGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTGCAGTGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACTGTTGCCTGAATAAATaGAAGAGCTCTCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHCCLNK*KSSLQE Trigger: TTCCTGTAGAGAGCTCTTTCATTTATTCAGGCAACA...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACAGCTTCATCTGGTTTTaGTTTACAAACGCTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHSFIWF*FTNAPT Trigger: TGTAGGAGCGTTTGTAAATCAAAACCAGATGAAGCT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAACTTGCTTCCAAGGGTaGGGGCCGCTGGTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTTCFQG*GPLVLI Trigger: AATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACAACTTGCTTCCAAGGGTaGGGGCCGCTGGTTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LTFFLGTFTFSTKQHNVTTCFQG*GPLVLI Trigger: AATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGT...TGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACATGGAGGCAGGCCTaGGGAAACGAAGGAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVTWRQA*GNEGGL Trigger: TAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACACAAACAAGGGCTCCATaGGATGACATGGAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTQTRAP*DDMEAG Trigger: GCCTGCCTCCATGTCATCTCATGGAGCCCTTGTTTG...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTGCTGATGAACACTCCTaGTTCTCGCCAGAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGADEHS*FSPEQL Trigger: AAGCTGTTCTGGCGAGAATCAGGAGTGTTCATCAGC...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATGCTGATGAACACTCCTaGTTCTCGCCAGAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQAKHTQFKHVICPIICHADEHS*FSPEQL Trigger: AAGCTGTTCTGGCGAGAATCAGGAGTGTTCATCAGC...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR TCA 90 bp | TCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGGTCAACTTGTGTCATTCTCTaGCTCTTGAGAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFTNTKHFRMPGRSSSRSTCVIL*LLRKEK Trigger: CTTTTCCTTTCTCAAGAGTCAGAGAATGACACAAGT...TGACCTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTATAACTGGCTGTGGCTaGAGATCTGGTGGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCITGCG*RSGGAV Trigger: CACAGCACCACCAGATCTTCAGCCACAGCCAGTTAT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACATTCTAAGGACTTTGTaGCCATGGCAGATTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHILRTL*PWQIYQ Trigger: CTGATAAATCTGCCATGGTCACAAAGTCCTTAGAAT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGGTCAATTCTAAGGACTTTGTaGCCATGGCAGATTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFTNTKHFRMPGRSSSRSILRTL*PWQIYQ Trigger: CTGATAAATCTGCCATGGTCACAAAGTCCTTAGAAT...TGACCTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTAGTGTCAAACAACAATaGAGATGCATTCGCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMPVRLLSELTLASVSSVKQQ*RCIRNC Trigger: ACAATTGCGAATGCATCTTCATTGTTGTTTGACACT...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTCACTTTTCCAGTCTCTaGTTCTCGCCCTGTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCHFSSL*FSPCPT Trigger: GGTAGGACAGGGCGAGAAGCAGAGACTGGAAAAGTG...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGCTCATCGACCAACATaGAGGGAAGCTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSAHRPT*REAGLP Trigger: TGGAAGCCCAGCTTCCCTCCATGTTGGTCGATGAGC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTCTATGTCCAAGTTTTTCTaGGCATACATCAGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLRMPVRLLSELTLASVSMSKFF*AYIRRN Trigger: ATTTCTCCTGATGTATGCCCAGAAAAACTTGGACAT...AGAAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAAACGGCACAAAGACTCTGCCCTAAGAGAAGACTCCAATCAATCCTAAGGTACAATGATGCTACATaGACACTAATCCACCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: EETAQRLCPKRRLQSILRYNDAT*TLIHQL Trigger: TAGTTGGTGGATTAGTGTTCATGTAGCATCATTGTA...CCTTAGGATTGATTGGAGTCTTCTCTTAGGGCAGAGTCTTTGTGCCGTTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAAACGGCACAAAGACTCTGCCCTAAGAGAAGACTCCAATCAATCCTAAGGTCCCAACCAAAAAGCTaGATTATTGATATAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EETAQRLCPKRRLQSILRSQPKS*IIDITG Trigger: GCCAGTTATATCAATAATTCAGCTTTTTGGTTGGGA...CCTTAGGATTGATTGGAGTCTTCTCTTAGGGCAGAGTCTTTGTGCCGTTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTAGAGGAAGCGTCTTCTaGATTGCAGTCAGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCRGSVF*IAVSMG Trigger: ACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGTGTCCTTGAAGAGCTaGAGGACGAAGGCCAATACG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSVSLKS*RTKANT Trigger: CGTATTGGCCTTCGTCCTTCAGCTCTTCAAGGACAC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCCATTTCGGTGTCCTTaGAGAGCTGAAGGACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVPFRCP*RAEGRR Trigger: CCTTCGTCCTTCAGCTCTTCAAGGACACCGAAATGG...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGTACCAAGAATTCCTTTaGTTTCTCTTGGAATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GFIYQHQTFQDARKEQLKYQEFL*FLLEFT Trigger: TGTGAATTCCAAGAGAAAGCAAAGGAATTCTTGGTA...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTCTGTGGCCAGCTTTTTAACTTGGGGTTCATTTACCAACACCAAACACACCATCAATATAGATaGAAAGCAGTGTCCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLCGQLFNLGFIYQHQTHHQYR*KAVSIE Trigger: CTCTATGGACACTGCTTTGCATCTATATTGATGGTG...TGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGGCAGCTCCTTGTCTTaGTGTAGCACTGTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTGSSLS*CSTVCG Trigger: GCCACATACAGTGCTACAGCAAGACAAGGAGCTGCC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGGCAGGTTTGTACCATaGACTGCAGGTTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSGRFVP*TAGSLW Trigger: CCACAGAGAACCTGCAGTGCATGGTACAAACCTGCC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGGCAGGTTTGTACCATaGACTGCAGGTTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYGRFVP*TAGSLW Trigger: CCACAGAGAACCTGCAGTGCATGGTACAAACCTGCC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACACACTTTTCCAGTCTCTaGTTCTCGCCCTGTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTHFSSL*FSPCPT Trigger: GGTAGGACAGGGCGAGAAGCAGAGACTGGAAAAGTG...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTAACACAGGGCGAGGTTaGGAGAAACCTCCCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCNTGRG*EKPPYV Trigger: TACATAGGGAGGTTTCTCCCAACCTCGCCCTGTGTT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCCTTCTGACCCCACTTaGCAGGTTTGTACCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVPSDPT*QVCTMH Trigger: GTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGG...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAAGAGGAAGCGTCTTCTaGATTGCAGTCAGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTRGSVF*IAVSMG Trigger: ACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGCCCCATTTGAGCTCTaGATCCTTCAGAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTAPFEL*ILQRLS Trigger: ACTCAGTCTCTGAAGGATTCAGAGCTCAAATGGGGC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | ACACACTTAAGGCACACCAATCATTTAATTCTTCCCAAATCTCTTGTAACTAGAGCGACTGTGGCTCTCTaGTTCCTGTACTTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: THLRHTNHLILPKSLVTRATVAL*FLYFQT Trigger: TGTCTGAAAGTACAGGAAGCAGAGAGCCACAGTCGC...TCTAGTTACAAGAGATTTGGGAAGAATTAAATGATTGGTGTGCCTTAAGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR GCA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATGCCGATAATGAAGACTaGACAGTTAGGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TQAKHTQFKHVICPIICHADNED*TVRSTF Trigger: GAATGTGGACCTAACTGTGCAGTCTTCATTATCGGC...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCTGAAGATCTGGTGGTaGTGTGTTTGGCATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVLKIWW*CVWHVH Trigger: GTGGACATGCCAAACACAGCACCACCAGATCTTCAG...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGTGCTTCATATACTGTaGTATTTTGTAGCAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LISLHSSCTHTYTHVYTHVLHIL*YFVAND Trigger: GTCATTTGCTACAAAATAGCACAGTATATGAAGCAC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGCCAACAGAACAGGGTaGTGTCCCAGATCTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVANRTG*CPRSET Trigger: TGTTTCAGATCTGGGACAGCACCCTGTTCTGTTGGC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTATATGCTTCCCTTTGTaGAATATTTCTGCCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGICFPL*NISAEA Trigger: GGCCTCGGCAGAAATATTGCACAAAGGGAAGCATAT...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTCTTTGGCGTGCAAGGTaGCTATTTTCCCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGLWRAR*LFSQNH Trigger: GTGATTTTGGGAAAATAGCCACCTTGCACGCCAAAG...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTAGCCTAATGGATCCTTaGCCTGGGTTAGAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVSLMDP*PGLETQ Trigger: CTGTGTCTCTAACCCAGGCCAAGGATCCATTAGGCT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTAACACAGGGCGAGGTTaGGAGAAACCTCCCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVNTGRG*EKPPYV Trigger: TACATAGGGAGGTTTCTCCCAACCTCGCCCTGTGTT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACTCCCAAAATCACAGCTaGCTTGTACCAAGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYSQNHS*LVPRTP Trigger: TGGAGTCCTTGGTACAAGTCAGCTGTGATTTTGGGA...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTCTCTTGGAATTCACATaGCAGTTTCTCAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCLLEFT*QFLSPN Trigger: GTTTGGGCTGAGAAACTGTCATGTGAATTCCAAGAG...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTAGCTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACACTCTTGGAATTCACATaGCAGTTTCTCAGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLAYLFPWHVYFFNKATLLEFT*QFLSPN Trigger: GTTTGGGCTGAGAAACTGTCATGTGAATTCCAAGAG...TGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAGCTAACTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTAGCTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACACAACTTGGGGCCAGATaGTATCATCCCAACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLAYLFPWHVYFFNKATQLGAR*YHPNQK Trigger: TTTTTGGTTGGGATGATATCATCTGGCCCCAAGTTG...TGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAGCTAACTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTATACATCAGGAGAAATaGCATCTGACCCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RELFVIQQYTINHSSSWGIHQEK*HLTLPN Trigger: GTTTGGAAGGGTCAGATGGCATTTCTCCTGATGTAT...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGCCGATAATGAAGACTaGACAGTTAGGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCADNED*TVRSTF Trigger: GAATGTGGACCTAACTGTGCAGTCTTCATTATCGGC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACCAGCAAAGTAAAATCTaGAGCGGCATCTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYQQSKI*SGICKL Trigger: CAGCTTGCAGATGCCGCTGCAGATTTTACTTTGCTG...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCAGCAAAGTAAAATCTaGAGCGGCATCTGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVQQSKI*SGICKL Trigger: CAGCTTGCAGATGCCGCTGCAGATTTTACTTTGCTG...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | AACCTCATGTCAAATTGTGCCAGGGCAGGAATATATGACAGGATTCACAAAAGCGATACAAGCAACTGCTaGTCTCAAATACTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLMSNCARAGIYDRIHKSDTSNC*SQILLE Trigger: TTCAAGAAGTATTTGAGACCAGCAGTTGCTTGTATC...GCTTTTGTGAATCCTGTCATATATTCCTGCCCTGGCACAATTTGACATGAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTCTGTTTCATTTTGTCTaGCACACCATGGCGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCLFHFV*HTMAIN Trigger: ATTGATCGCCATGGTGTGTCAGACAAAATGAAACAG...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATACTTGTGTCATTCTCTaGCTCTTGAGAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQAKHTQFKHVICPIICHTCVIL*LLRKEK Trigger: CTTTTCCTTTCTCAAGAGTCAGAGAATGACACAAGT...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTAGAAGACACGCAACTTaGCTGAGAAAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCRRHAT*LRKCFI Trigger: TATGAAGCACTTTCTCAGTCAAGTTGCGTGTCTTCT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTAGCTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACAGGTAATTGCTCTATTTaGGCCTTTGAGAAGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLAYLFPWHVYFFNKATGNCSI*AFEKTL Trigger: GAGTGTCTTCTCAAAGGCTCAAATAGAGCAATTACC...TGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAGCTAACTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGAATCCTTCAGAGACTaGGTGAGGGTAGGAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVESFRD*VRVGIN Trigger: ATTGATTCCTACCCTCACTCAGTCTCTGAAGGATTC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGAAGCCAGGAAATACTaGAGGAGCTATTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSEARKY*RSYSGS Trigger: AGAACCTGAATAGCTCCTTCAGTATTTCCTGGCTTC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACAGCCGATAATGAAGACTaGACAGTTAGGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTFFLGTFTFSTKQHNVTADNED*TVRSTF Trigger: GAATGTGGACCTAACTGTGCAGTCTTCATTATCGGC...TGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGTTTGGCATGTCCACTaGCAGCAAAGTAAAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYVWHVH*QQSKIC Trigger: GCAGATTTTACTTTGCTGGCAGTGGACATGCCAAAC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTCTTTGGCGTGCAAGGTaGCTATTTTCCCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSLWRAR*LFSQNH Trigger: GTGATTTTGGGAAAATAGCCACCTTGCACGCCAAAG...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACAATGGATCCTTGGCCTaGGTTAGAGACACAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYNGSLA*VRDTED Trigger: ATCTTCTGTGTCTCTAACCCAGGCCAAGGATCCATT...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTAATGGATCCTTGGCCTaGGTTAGAGACACAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSNGSLA*VRDTED Trigger: ATCTTCTGTGTCTCTAACCCAGGCCAAGGATCCATT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTATCTTGCTACAACTTaGGGCCAGATGATATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCYLATT*GQMISS Trigger: GGATGATATCATCTGGCCCCAAGTTGTAGCAAGATA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGGTAGGATTTCCTTATaGCATGGACAGTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVGRISL*HGQCAF Trigger: GAAAGCACACTGTCCATGCCATAAGGAAATCCTACC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | ACTAATAAGCAGATCAGAGCTTCATTTCATGCCACACATGTACCAATTCTTCTTTGTTGCCTGAATAAATaGAAGAGCTCTCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNKQIRASFHATHVPILLCCLNK*KSSLQE Trigger: TTCCTGTAGAGAGCTCTTTCATTTATTCAGGCAACA...AAGAAGAATTGGTACATGTGTGGCATGAAATGAAGCTCTGATCTGCTTATTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCTGTTTCATTTTGTCTaGCACACCATGGCGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVLFHFV*HTMAIN Trigger: ATTGATCGCCATGGTGTGTCAGACAAAATGAAACAG...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGGTAATTGCTCTATTTaGGCCTTTGAGAAGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVGNCSI*AFEKTL Trigger: GAGTGTCTTCTCAAAGGCTCAAATAGAGCAATTACC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | AAAGACATAACTAATAAGCAGATCAGAGCTTCATTTCATGCCACACATGTACCAACCTTCATCTGGTTTTaGTTTACAAACGCTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KDITNKQIRASFHATHVPTFIWF*FTNAPT Trigger: TGTAGGAGCGTTTGTAAATCAAAACCAGATGAAGGT...TGGTACATGTGTGGCATGAAATGAAGCTCTGATCTGCTTATTAGTTATGTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGCCGCTGGTTCTCATTaGTTTCTTAACAACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTAAGSH*FLNNFC Trigger: GCAAAAGTTGTTAAGAAAGCAATGAGAACCAGCGGC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGCCGCTGGTTCTCATTaGTTTCTTAACAACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYAAGSH*FLNNFC Trigger: GCAAAAGTTGTTAAGAAAGCAATGAGAACCAGCGGC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACACAATGTAACAATACATCAGGAGAAATaGCATCTGACCCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTFFLGTFTFSTKQHNVTIHQEK*HLTLPN Trigger: GTTTGGAAGGGTCAGATGGCATTTCTCCTGATGTAT...TGTTACATTGTGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGAGAGGTGTTTTATGTaGATTTGCAAAACACAACGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCERCFM*ICKTQR Trigger: CCGTTGTGTTTTGCAAATGCACATAAAACACCTCTC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTATTCAAGTAGGCATTTaGATTTTGAGACTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCIQVGI*ILRLAA Trigger: TGCTGCCAGTCTCAAAATCCAAATGCCTACTTGAAT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTTGTTGCCTGAATAAATaGAAGAGCTCTCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVCCLNK*KSSLQE Trigger: TTCCTGTAGAGAGCTCTTTCATTTATTCAGGCAACA...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAAGCTTCATCTGGTTTTaGTTTACAAACGCTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTSFIWF*FTNAPT Trigger: TGTAGGAGCGTTTGTAAATCAAAACCAGATGAAGCT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTCTTCGTTGGTCACTTaGCTTTTCAAAAAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCSSLVT*LFKKCS Trigger: AGAACACTTTTTGAAAAGTCAAGTGACCAACGAAGA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTACTTGTGTCATTCTCTaGCTCTTGAGAAAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSTCVIL*LLRKEK Trigger: CTTTTCCTTTCTCAAGAGTCAGAGAATGACACAAGT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTCCCAACCAAAAAGCTaGATTATTGATATAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCSQPKS*IIDITG Trigger: GCCAGTTATATCAATAATTCAGCTTTTTGGTTGGGA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACCTCTATTTGAGCCTTTaGGAAGACACTCTTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYLYLSL*EDTLYF Trigger: GAAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAG...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTCACCATCAATATAGATaGAAAGCAGTGTCCATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSHHQYR*KAVSIE Trigger: CTCTATGGACACTGCTTTGCATCTATATTGATGGTG...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTAAGGATACAAGCAACTaGTGGTCTCAAATACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCKDTSN*WSQILL Trigger: AAGAAGTATTTGAGACCAGCAGTTGCTTGTATCCTT...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | ACTAATAAGCAGATCAGAGCTTCATTTCATGCCACACATGTACCAATTCTTCTTGTTTCTGTAACCCATTaGAAGCCAAATAGTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TNKQIRASFHATHVPILLVSVTH*KPNSST Trigger: AGTAGAACTATTTGGCTTCCAATGGGTTACAGAAAC...AAGAAGAATTGGTACATGTGTGGCATGAAATGAAGCTCTGATCTGCTTATTAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGATACAAGCAACTGCTaGTCTCAAATACTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLCPIIQLLISLHSSCDTSNC*SQILLE Trigger: TTCAAGAAGTATTTGAGACCAGCAGTTGCTTGTATC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAATTCAAGTAGGCATTTaGATTTTGAGACTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTIQVGI*ILRLAA Trigger: TGCTGCCAGTCTCAAAATCCAAATGCCTACTTGAAT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACCAACCAATTCCAAAATaGATCTGCAACAGACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYQPIPK*ICNRPF Trigger: AAATGGTCTGTTGCAGATTCATTTTGGAATTGGTTG...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACTACAATGATGCTACATaGACACTAATCCACCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYYNDAT*TLIHQL Trigger: TAGTTGGTGGATTAGTGTTCATGTAGCATCATTGTA...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACTCCCAACCAAAAAGCTaGATTATTGATATAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYSQPKS*IIDITG Trigger: GCCAGTTATATCAATAATTCAGCTTTTTGGTTGGGA...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTAAGGATACAAGCAACTaGTGGTCTCAAATACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSKDTSN*WSQILL Trigger: AAGAAGTATTTGAGACCAGCAGTTGCTTGTATCCTT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTAGCATACAATACATATaGCCTGTAGATAGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVSIQYI*PVDREE Trigger: TTCCTCTCTATCTACAGGGCATATGTATTGTATGCT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGTTTCTGTAACCCATTaGAAGCCAAATAGTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTVSVTH*KPNSST Trigger: AGTAGAACTATTTGGCTTCCAATGGGTTACAGAAAC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGTTTCTGTAACCCATTaGAAGCCAAATAGTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVVSVTH*KPNSST Trigger: AGTAGAACTATTTGGCTTCCAATGGGTTACAGAAAC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACATGTCCAAGTTTTTCTaGGCATACATCAGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYMSKFF*AYIRRN Trigger: ATTTCTCCTGATGTATGCCCAGAAAAACTTGGACAT...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCCTTTGCTTTCTCTTaGAATTCACATGACAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSSFAFS*NSHDSF Trigger: GAAACTGTCATGTGAATTCCAAGAGAAAGCAAAGGA...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACATACCAAGAATTCCTTTaGTTTCTCTTGGAATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCPIIQLLISLHSSCTYQEFL*FLLEFT Trigger: TGTGAATTCCAAGAGAAAGCAAAGGAATTCTTGGTA...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGTGCTTCATATACTGTaGTATTTTGTAGCAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYVLHIL*YFVAND Trigger: GTCATTTGCTACAAAATAGCACAGTATATGAAGCAC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGAAGCGTCTTCTGAATaGCAGTCAGCATGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAEASSE*QSAWVQ Trigger: CTGGACCCATGCTGACTGCAATTCAGAAGACGCTTC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAAAACACAGGGCGAGGTaGGGAGAAACCTCCCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAKHRAR*GETSLC Trigger: ACATAGGGAGGTTTCTCCCAACCTCGCCCTGTGTTT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAGGAGAGAGGCACAACTaGTGTCATTCTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAGERHN*CHSLTL Trigger: AAGAGTCAGAGAATGACACAAGTTGTGCCTCTCTCC...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGATTCAAGTAGGCATTaGGATTTTGAGACTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSDSSRH*DFETGS Trigger: GCTGCCAGTCTCAAAATCCAAATGCCTACTTGAATC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 90 bp | GAACTGCCTAAACAGAGAAGTCAGCTGGGTGGCAGGTCCTCCTTCTaGCCCCACTTGGCAGGTTTGTACCATGCACTGCAGGTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELPKQRSQLGGRSSF*PHLAGLYHALQVLC Trigger: ACAGAGAACCTGCAGTGCATGGTACAAACCTGCCAAGTGGGGTCAGAAGGAGGACCTGCCACCCAGCTGACTTCTCTGTTTAGGCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS CCA 90 bp | GATGTCCAATGTACAGAAGTAATCCACGGAGCTCATCGACCAACATaGAGGGAAGCTGGGCTTCCAAAGCCTCATAGGGATGGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DVQCTEVIHGAHRPT*REAGLPKPHRDGQG Trigger: GCCCTGCCCATCCCTATGAGGCTTTGGAAGCCCAGCTTCCCTCCATGTTGGTCGATGAGCTCCGTGGATTACTTCTGTACATTGGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCGGTCTAAAACATGGCTaGCTACATCTTCTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGSPQSCRQRPPRQEGSSGLKHG*LHLLSL Trigger: CAGAGATAGAAGATGTAGCAAGCCATGTTTTAGACC...GCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS GCA 90 bp | TGGTGGTGCTGTGTTTGGCATGTCCACTGCCAGCAAAGTAAAATCTaGAGCGGCATCTGCAAGCTGGGAGAGAGGCACAACTTGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WWCCVWHVHCQQSKI*SGICKLGERHNLCH Trigger: ATGACACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGATTTTACTTTGCTGGCAGTGGACATGCCAAACACAGCACCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 90 bp | TGCCCTGTAGATAGAGAGGAAGCGTCTTCTGAATTGCAGTCAGCATaGGTCCAGGCAGCTCCTTGTCTTGCTGTAGCACTGTATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPVDREEASSELQSA*VQAAPCLAVALYVA Trigger: TGCCACATACAGTGCTACAGCAAGACAAGGAGCTGCCTGGACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCTCTATCTACAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCATCGTCGAACACTACACATTGTaGCCTAATACTGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPQSCRQRPPRQEGSSIVEHYTL*PNTVCF Trigger: AAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTC...GACGATGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTAGCCCACAGAGCTGTAGACAGAGACCTCCCAGGCAGGAAGGCAGCAGCAATCTTCGTTGGTCACTaGACTTTTCAAAAAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVAHRAVDRDLPGRKAAAIFVGH*TFQKVF Trigger: GAACACTTTTTGAAAAGTCAAGTGACCAACGAAGAT...TGCTGCTGCCTTCCTGCCTGGGAGGTCTCTGTCTACAGCTCTGTGGGCTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGGGCATCGACAGTGGAGACTaGATAATATTGGTAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGGPGTGIFTQHPQEQLGIDSGD*IILVRP Trigger: AGGCCTTACCAATATTATCAAGTCTCCACTGTCGAT...GCCCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS TCA 90 bp | CGAAGGCCAATACGGATGCTAATCGAGGAGGGGGTGAGGACCCTTTaGACTCAAGGTAGGATTTCCTTATGGCATGGACAGTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRPIRMLIEEGVRTL*TQGRISLWHGQCAF Trigger: GAAAGCACACTGTCCATGCCATAAGGAAATCCTACCTTGAGTTCAAAGGGTCCTCACCCCCTCCTCGATTAGCATCCGTATTGGCCTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CAGGATGCCAGGAAGGAGCAGCTCAAGGTCACAGGCACCCATTTCGGTGTCCTTGGTCTAAAACATGGCTaGCTACATCTTCTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDARKEQLKVTGTHFGVLGLKHG*LHLLSL Trigger: CAGAGATAGAAGATGTAGCAAGCCATGTTTTAGACC...AAGGACACCGAAATGGGTGCCTGTGACCTTGAGCTGCTCCTTCCTGGCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS TCA 90 bp | GACCCTTCCAAACAAGGGCTCCATGAGATGACATGGAGGCAGGCCTaGGGAAACGAAGGAGGTCTAAAACATGGCTTGCTACATCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: DPSKQGLHEMTWRQA*GNEGGLKHGLLHLL Trigger: TAGAAGATGTAGCAAGCCATGTTTTAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGTCATCTCATGGAGCCCTTGTTTGGAAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 90 bp | TTTCCTGTAGATAGAGAGGAAGCGTCTTCTGAATTGCAGTCAGCATaGGTCCAGGCAGCTCCTTGTCTTGCTGTAGCACTGTATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPVDREEASSELQSA*VQAAPCLAVALYVA Trigger: TGCCACATACAGTGCTACAGCAAGACAAGGAGCTGCCTGGACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCTCTATCTACAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCGGCTTCACCTTCAACACTACCCACTGTCTTCTGCCACTTAGAATGCTGGAAGTTCCTGACACAATaGCTGATGAACACTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPASPSTLPTVFCHLECWKFLTQ*LMNTPD Trigger: ATCAGGAGTGTTCATCAGCAATTGTGTCAGGAACTT...CCAGCATTCTAAGTGGCAGAAGACAGTGGGTAGTGTTGAAGGTGAAGCCGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGAGGACCAGGGACAGGCATTTTTACCCAGCATCCCCAAGAGCAGTTGGAATGACTTAAATATCTaGCTACAACTTGGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLEDQGQAFLPSIPKSSWNDLNI*LQLGAR Trigger: TCTGGCCCCAAGTTGTAGCAAGATATTTAAGTCATT...CCAACTGCTCTTGGGGATGCTGGGTAAAAATGCCTGTCCCTGGTCCTCCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS CCA 90 bp | GATGACATGGAGGCAGGCCTGAGGAAACGAAGGAGGTCTAAAACATaGCTTGCTACATCTTCTATCTCTGCAACAGCTGCTAACAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: DDMEAGLRKRRRSKT*LATSSISATAANSR Trigger: TCTACTGTTAGCAGCTGTTGCAGAGATAGAAGATGTAGCAAGCCATGTTTTAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTTCTGCCACTTAGAATGCTGGGATTACCGGTTTGTATCACCAGGCCCAGTCCACATTCTCTCTTaGAAGTTCCTGACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: TVFCHLECWDYRFVSPGPVHILS*KFLTQL Trigger: CAATTGTGTCAGGAACTTCAAAGAGAGAATGTGGAC...TGGGCCTGGTGATACAAACCGGTAATCCCAGCATTCTAAGTGGCAGAAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS TCA 90 bp | TTGTCTGACACACCATGGCGATCAATCTGGTACAATGATGCTACATaGACACTAATCCACCAACTAAAGCCTAATGGATCCTTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDTPWRSIWYNDAT*TLIHQLKPNGSLAW Trigger: CCAGGCCAAGGATCCATTAGGCTTTAGTTGGTGGATTAGTGTTCATGTAGCATCATTGTACCAGATTGATCGCCATGGTGTGTCAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCTGTCAAATGGCTGGCAATCGTCTCCTTGCCAGTTGGCATGTGTTCTGGAGACTTGATAATATaGGTAAGGCCTTTCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLAVKWLAIVSLPVGMCSGDLII*VRPFKG Trigger: TCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCC...AGAACACATGCCAACTGGCAAGGAGACGATTGCCAGCCATTTGACAGCCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTCTGTGGCCAGCTTTTTAACTTGGGGTTCATTTACCAACACCAAACAGGAGAGAGGCACAACTaGTGTCATTCTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLCGQLFNLGFIYQHQTGERHN*CHSLTL Trigger: AAGAGTCAGAGAATGACACAAGTTGTGCCTCTCTCC...TGTTTGGTGTTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTCATTTACCAACACCAAACATTTCAGGATGCCAGGAAGGAGCAGCTCAAGGTGTTTTATGTGCATTaGCAAAACACAACGGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFIYQHQTFQDARKEQLKVFYVH*QNTTDP Trigger: TGGGTCCGTTGTGTTTTGCAAATGCACATAAAACAC...CTTGAGCTGCTCCTTCCTGGCATCCTGAAATGTTTGGTGTTGGTAAATGAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTCCCCACTTGGCAGGTTaGTACCATGCACTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RELFVIQQYTINHSSSWGPHLAG*YHALQV Trigger: AACCTGCAGTGCATGGTACAAACCTGCCAAGTGGGG...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTCTGCCGAGGCCCCATTaGAGCTCTGAATCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RELFVIQQYTINHSSSWGLPRPH*SSESFR Trigger: TCTGAAGGATTCAGAGCTCAAATGGGGCCTCGGCAG...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | GCAACCTCCGAATGCCTGTGCGCCTGTTGTCAGAACTTACACTTGCTTCTGTTTATCTTCGTTGGTCACTaGACTTTTCAAAAAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATSECLCACCQNLHLLLFIFVGH*TFQKVF Trigger: GAACACTTTTTGAAAAGTCAAGTGACCAACGAAGAT...AAACAGAAGCAAGTGTAAGTTCTGACAACAGGCGCACAGGCATTCGGAGGTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACATCGACAGTGGAGACTaGATAATATTGGTAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHIDSGD*IILVRP Trigger: AGGCCTTACCAATATTATCAAGTCTCCACTGTCGAT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AACCTCATGTCAAATTGTGCCAGGGCAGGAATATATGACAGGATTCACAAAAGCTATTCTTCCTTTAACTaGCTTCCAAGGGTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NLMSNCARAGIYDRIHKSYSSFN*LPRVRA Trigger: GGCCCTCACCCTTGGAAGCAAGTTAAAGGAAGAATA...GCTTTTGTGAATCCTGTCATATATTCCTGCCCTGGCACAATTTGACATGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACAAGTTCCTGACACAATaGCTGATGAACACTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHKFLTQ*LMNTPD Trigger: ATCAGGAGTGTTCATCAGCAATTGTGTCAGGAACTT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGTCCACATTCTCTCTTaGAAGTTCCTGACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHVHILS*KFLTQL Trigger: CAATTGTGTCAGGAACTTCAAAGAGAGAATGTGGAC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGTGTTTTATGTGCATTaGCAAAACACAACGGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHVFYVH*QNTTDP Trigger: TGGGTCCGTTGTGTTTTGCAAATGCACATAAAACAC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 90 bp | ATAAGCGCTTGCTTGGGATCGTCTGGGCTGGGTAATTGCTCTATTTaGGCCTTTGAGAAGACACTCTTTACTTCTGAGAGTGTAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISACLGSSGLGNCSI*AFEKTLFTSESVNS Trigger: ACTATTTACACTCTCAGAAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAGCAATTACCCAGCCCAGACGATCCCAAGCAAGCGCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 90 bp | TTGTTTATCACTACAGCAGTTCCTCACCAGTGTAAGCATCGACAGTaGAGACTTGATAATATTGGTAAGGCCTTTCAAAGGAAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFITTAVPHQCKHRQ*RLDNIGKAFQRKPG Trigger: TCCTGGCTTCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCCACTGTCGATGCTTACACTGGTGAGGAACTGCTGTAGTGATAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGAACACTACACATTGTaGCCTAATACTGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHEHYTL*PNTVCF Trigger: AAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACACCTTGTCAAATCTGTaGAGTGACAGGCATATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHTLSNL*SDRHIK Trigger: CTTAATATGCCTGTCACTCAACAGATTTGACAAGGT...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGGAGACTTGATAATATaGGTAAGGCCTTTCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHGDLII*VRPFKG Trigger: TCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTAGCCTTCACTCCTCATGTACACACACGTACACACACGTGTACACACACGCTCTATTTGAGCCTTaGAGAAGACACTCTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LISLHSSCTHTYTHVYTHALFEP*RRHSLL Trigger: AAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAGC...GTGTGTGTACACGTGTGTGTACGTGTGTGTACATGAGGAGTGAAGGCTAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CATGCACTGCAGGTTCTCTGTGGCCAGCTTTTTAACTTGGGGTTCATTTACCAAGCTCTATTTGAGCCTTaGAGAAGACACTCTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: HALQVLCGQLFNLGFIYQALFEP*RRHSLL Trigger: AAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAGC...TTGGTAAATGAACCCCAAGTTAAAAAGCTGGCCACAGAGAACCTGCAGTGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTCAACTATAGTCAAGGTTCTTTCCCACTGAAGACACAAGGAATTTTAGAAGCGTCTTCTGAATaGCAGTCAGCATGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLNYSQGSFPLKTQGILEASSE*QSAWVQ Trigger: CTGGACCCATGCTGACTGCAATTCAGAAGACGCTTC...TAAAATTCCTTGTGTCTTCAGTGGGAAAGAACCTTGACTATAGTTGAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACACCCCACTTGGCAGGTTaGTACCATGCACTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTPHLAG*YHALQV Trigger: AACCTGCAGTGCATGGTACAAACCTGCCAAGTGGGG...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACCTGCCGAGGCCCCATTaGAGCTCTGAATCCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYLPRPH*SSESFR Trigger: TCTGAAGGATTCAGAGCTCAAATGGGGCCTCGGCAG...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 90 bp | GTAAGGCCTTTCAAAGGAAGCCAGGAAATACTGAAGGAGCTATTCTaGACAGTGACGGACCGTTTCAAAAGTTCTTCTATAAAGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VRPFKGSQEILKELF*TVTDRFKSSSIKLQ Trigger: TTGGAGCTTTATAGAAGAACTTTTGAAACGGTCCGTCACTGTTCAGAATAGCTCCTTCAGTATTTCCTGGCTTCCTTTGAAAGGCCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050446.13 |
||
| CDS GCA 90 bp | GGATTCACATCAATCAGCAAGTCAGGGTCAGAGAGGTGTTTTATGTaGATTTGCAAAACACAACGGACCCATGATCTTATAGTTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GFTSISKSGSERCFM*ICKTQRTHDLIVKD Trigger: GTCCTTAACTATAAGATCATGGGTCCGTTGTGTTTTGCAAATGCACATAAAACACCTCTCTGACCCTGACTTGCTGATTGATGTGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATGGAGAGAGGCACAACTaGTGTCATTCTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQAKHTQFKHVICPIICHGERHN*CHSLTL Trigger: AAGAGTCAGAGAATGACACAAGTTGTGCCTCTCTCC...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGAAGCGTCTTCTGAATaGCAGTCAGCATGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVEASSE*QSAWVQ Trigger: CTGGACCCATGCTGACTGCAATTCAGAAGACGCTTC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAAAACACAGGGCGAGGTaGGGAGAAACCTCCCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTKHRAR*GETSLC Trigger: ACATAGGGAGGTTTCTCCCAACCTCGCCCTGTGTTT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTTCTGAAGGCATGACCTaGTCAAATCTGTTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RELFVIQQYTINHSSSWGSEGMT*SNLLSD Trigger: GTCACTCAACAGATTTGACAAGGTCATGCCTTCAGA...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTTCCATCTGTTTCATTTaGTCTGACACACCATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RELFVIQQYTINHSSSWGSICFI*SDTPWR Trigger: TCGCCATGGTGTGTCAGACAAAATGAAACAGATGGA...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTATTCTTCCTTTAACTaGCTTCCAAGGGTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCSLCPIIQLLISLHSSCYSSFN*LPRVRA Trigger: GGCCCTCACCCTTGGAAGCAAGTTAAAGGAAGAATA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 90 bp | ATTCTTAGATACCAAGAATTCCTTTGCTTTCTCTTGGAATTCACATaGCAGTTTCTCAGCCCAAACACCAATGTCCAAGTTTTTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILRYQEFLCFLLEFT*QFLSPNTNVQVFLG Trigger: GCCCAGAAAAACTTGGACATTGGTGTTTGGGCTGAGAAACTGTCATGTGAATTCCAAGAGAAAGCAAAGGAATTCTTGGTATCTAAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS GCA 90 bp | AGCAACTGCTGGTCTCAAATACTTCTTGAACACCATCAATATAGATaGAAAGCAGTGTCCATAGAGCATGTCTCTGTACCATTTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SNCWSQILLEHHQYR*KAVSIEHVSVPFHH Trigger: ATGATGAAATGGTACAGAGACATGCTCTATGGACACTGCTTTGCATCTATATTGATGGTGTTCAAGAAGTATTTGAGACCAGCAGTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 90 bp | CCTAATGGATCCTTGGCCTGGGTTAGAGACACAGAAGATCTTCGTTaGTCACTTGACTTTTCAAAAAGTGTTCTAAGTAGTTTATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PNGSLAWVRDTEDLR*SLDFSKSVLSSLFN Trigger: GTTGAATAAACTACTTAGAACACTTTTTGAAAAGTCAAGTGACCAACGAAGATCTTCTGTGTCTCTAACCCAGGCCAAGGATCCATTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTTCAAAGAGGCTGACATaGGTTAAATTGTCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCSLCPIIQLLISLHSSCSKRLT*VKLSPA Trigger: GGCAGGTGACAATTTAACCAATGTCAGCCTCTTTGA...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTCAACTATAGTCAAGGTTCTTTCCCACTGAAGACACAAGGAATTTTATCCATCTGTTTCATTTaGTCTGACACACCATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLNYSQGSFPLKTQGILSICFI*SDTPWR Trigger: TCGCCATGGTGTGTCAGACAAAATGAAACAGATGGA...TAAAATTCCTTGTGTCTTCAGTGGGAAAGAACCTTGACTATAGTTGAGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTTATTCTTCCTTTAACTaGCTTCCAAGGGTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVYSSFN*LPRVRA Trigger: GGCCCTCACCCTTGGAAGCAAGTTAAAGGAAGAATA...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATAAGTTCCTGACACAATaGCTGATGAACACTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TQAKHTQFKHVICPIICHKFLTQ*LMNTPD Trigger: ATCAGGAGTGTTCATCAGCAATTGTGTCAGGAACTT...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR CAA 90 bp | ACACAAGCCAAACACACCCAATTTAAGCATGTCATTTGTCCCATCATATGTCATGTCCACATTCTCTCTTaGAAGTTCCTGACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: TQAKHTQFKHVICPIICHVHILS*KFLTQL Trigger: CAATTGTGTCAGGAACTTCAAAGAGAGAATGTGGAC...ATGACATATGATGGGACAAATGACATGCTTAAATTGGGTGTGTTTGGCTTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154496.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTGGAGAGAGGCACAACTaGTGTCATTCTCTGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVGERHN*CHSLTL Trigger: AAGAGTCAGAGAATGACACAAGTTGTGCCTCTCTCC...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTATTTGTGATACAACAGTACACAATTAATCACAGTAGCAGCTGGGGTATATCTTGCTACAACTaGGGGCCAGATGATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: RELFVIQQYTINHSSSWGISCYN*GPDDII Trigger: GATGATATCATCTGGCCCCAAGTTGTAGCAAGATAT...ACCCCAGCTGCTACTGTGATTAATTGTGTACTGTTGTATCACAAATAATTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGCTATATGCTTCCCTTaGTGCAATATTTCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCSLCPIIQLLISLHSSCAICFP*CNISAE Trigger: CTCGGCAGAAATATTGCACAAAGGGAAGCATATAGC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACATCAAAGAGGCTGACATaGGTTAAATTGTCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTSKRLT*VKLSPA Trigger: GGCAGGTGACAATTTAACCAATGTCAGCCTCTTTGA...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTTCTGAAGGCATGACCTaGTCAAATCTGTTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVSEGMT*SNLLSD Trigger: GTCACTCAACAGATTTGACAAGGTCATGCCTTCAGA...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTCCATCTGTTTCATTTaGTCTGACACACCATGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSSICFI*SDTPWR Trigger: TCGCCATGGTGTGTCAGACAAAATGAAACAGATGGA...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGTTAGCTTACCTTTTTCCTTGGCACGTTTACTTTTTCAACAAAGCAACAATATCTTGCTACAACTaGGGGCCAGATGATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SQLAYLFPWHVYFFNKATISCYN*GPDDII Trigger: GATGATATCATCTGGCCCCAAGTTGTAGCAAGATAT...TGTTGCTTTGTTGAAAAAGTAAACGTGCCAAGGAAAAAGGTAAGCTAACTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGATTCAAGTAGGCATTaGGATTTTGAGACTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTDSSRH*DFETGS Trigger: GCTGCCAGTCTCAAAATCCAAATGCCTACTTGAATC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGAGGGTAGGAATCAATaGGATGACAACGTGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSEGRNQ*DDNVLI Trigger: AATCAGCACGTTGTCATCCAATTGATTCCTACCCTC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAGCTATATGCTTCCCTTaGTGCAATATTTCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTAICFP*CNISAE Trigger: CTCGGCAGAAATATTGCACAAAGGGAAGCATATAGC...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTGGAGACTTGATAATATaGGTAAGGCCTTTCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QCSLCPIIQLLISLHSSCGDLII*VRPFKG Trigger: TCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCC...ACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACATCGACAGTGGAGACTaGATAATATTGGTAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYIDSGD*IILVRP Trigger: AGGCCTTACCAATATTATCAAGTCTCCACTGTCGAT...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGGTCTAAAACATGGCTaGCTACATCTTCTATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSGLKHG*LHLLSL Trigger: CAGAGATAGAAGATGTAGCAAGCCATGTTTTAGACC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTAAGTTCCTGACACAATaGCTGATGAACACTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSKFLTQ*LMNTPD Trigger: ATCAGGAGTGTTCATCAGCAATTGTGTCAGGAACTT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGTCCACATTCTCTCTTaGAAGTTCCTGACACAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYVHILS*KFLTQL Trigger: CAATTGTGTCAGGAACTTCAAAGAGAGAATGTGGAC...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTATATCTTGCTACAACTaGGGGCCAGATGATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSISCYN*GPDDII Trigger: GATGATATCATCTGGCCCCAAGTTGTAGCAAGATAT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | ACACACTTAAGGCACACCAATCATTTAATTCTTCCCAAATCTCTTGTAACTAGAGAACACTACACATTGTaGCCTAATACTGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: THLRHTNHLILPKSLVTREHYTL*PNTVCF Trigger: AAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTC...TCTAGTTACAAGAGATTTGGGAAGAATTAAATGATTGGTGTGCCTTAAGTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138567.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTACCTTGTCAAATCTGTaGAGTGACAGGCATATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSTLSNL*SDRHIK Trigger: CTTAATATGCCTGTCACTCAACAGATTTGACAAGGT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACAATGACTTAAATATCTaGCTACAACTTGGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYNDLNI*LQLGAR Trigger: TCTGGCCCCAAGTTGTAGCAAGATATTTAAGTCATT...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTAATGACTTAAATATCTaGCTACAACTTGGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSNDLNI*LQLGAR Trigger: TCTGGCCCCAAGTTGTAGCAAGATATTTAAGTCATT...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTGCTCTATTTGAGCCTTaGAGAAGACACTCTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSALFEP*RRHSLL Trigger: AAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAGC...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 90 bp | GCTTTATATATTTTAATACTTCACCAAGGTATTCTAAGGACTTTGTaGCCATGGCAGATTTATCAGAAAATGTCTGCAGAGTCCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALYILILHQGILRTL*PWQIYQKMSAESCK Trigger: CTTACAGGACTCTGCAGACATTTTCTGATAAATCTGCCATGGTCACAAAGTCCTTAGAATACCTTGGTGAAGTATTAAAATATATAAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACAACGACCATAAACAACTaGTTTCAATTTTTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTTTINN*FQFFSQ Trigger: CTGGGAGAAAAATTGAAACAAGTTGTTTATGGTCGT...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACGACCATAAACAACTaGTTTCAATTTTTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKIEQSFTVFLMSYYTVTTINN*FQFFSQ Trigger: CTGGGAGAAAAATTGAAACAAGTTGTTTATGGTCGT...AACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACATCTTCGTTGGTCACTaGACTTTTCAAAAAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQDRAEFYSVPYVLLYSYIFVGH*TFQKVF Trigger: GAACACTTTTTGAAAAGTCAAGTGACCAACGAAGAT...GTAACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTATGTCCTATTATACAGTTACTAATTAGCCTTCACTCCTCATGTACATACTTGATAACTGTATaGCATACCATAGTCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSLCPIIQLLISLHSSCTYLITV*HTIVLD Trigger: ATCCAGGACTATGGTATGCAATACAGTTATCAAGTA...TGTACATGAGGAGTGAAGGCTAATTAGTAACTGTATAATAGGACATAAGGAACA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCAAGATAGAGCAGAGTTTTACAGTGTTCCTTATGTCCTATTATACAGTTACTTGATAACTGTATaGCATACCATAGTCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLQDRAEFYSVPYVLLYSYLITV*HTIVLD Trigger: ATCCAGGACTATGGTATGCAATACAGTTATCAAGTA...ACTGTATAATAGGACATAAGGAACACTGTAAAACTCTGCTCTATCTTGAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 72 bp | TCTCAGTGCCAACAGAACAGGGTGCTGTCCCAGATCTaGAACACAGGGCGAGGTTGGGAGAAACCTCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SQCQQNRVLSQI*NTGRGWEKPPY Trigger: ATAGGGAGGTTTCTCCCAACCTCGCCCTGTGTTTCAGATCTGGGACAGCACCCTGTTCTGTTGGCACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS GCA 72 bp | TGTGTTTGGCATGTCCACTGCCAGCAAAGTAAAATCTaGAGCGGCATCTGCAAGCTGGGAGAGAGGCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: CVWHVHCQQSKI*SGICKLGERHN Trigger: GTTGTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCAGATTTTACTTTGCTGGCAGTGGACATGCCAAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS TCA 72 bp | CCGAGGCCCCATTTGAGCTCTGAATCCTTCAGAGACTaGGTGAGGGTAGGAATCAATTGGATGACAACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRPHLSSESFRD*VRVGINWMTTC Trigger: GCACGTTGTCATCCAATTGATTCCTACCCTCACTCAGTCTCTGAAGGATTCAGAGCTCAAATGGGGCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS GCA 72 bp | CTGAAGATCTGGTGGTGCTGTGTTTGGCATGTCCACTaGCAGCAAAGTAAAATCTGCAGCGGCATCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LKIWWCCVWHVH*QQSKICSGICK Trigger: CTTGCAGATGCCGCTGCAGATTTTACTTTGCTGGCAGTGGACATGCCAAACACAGCACCACCAGATCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 72 bp | TGTACAGAAGTAATCCACGGAGCTCATCGACCAACATaGAGGGAAGCTGGGCTTCCAAAGCCTCATAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CTEVIHGAHRPT*REAGLPKPHRD Trigger: ATCCCTATGAGGCTTTGGAAGCCCAGCTTCCCTCCATGTTGGTCGATGAGCTCCGTGGATTACTTCTGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS TCA 72 bp | AAACAAGGGCTCCATGAGATGACATGGAGGCAGGCCTaGGGAAACGAAGGAGGTCTAAAACATGGCTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: KQGLHEMTWRQA*GNEGGLKHGLL Trigger: TAGCAAGCCATGTTTTAGACCTCCTTCGTTTCCTCAGGCCTGCCTCCATGTCATCTCATGGAGCCCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS TCA 72 bp | ATACGGATGCTAATCGAGGAGGGGGTGAGGACCCTTTaGACTCAAGGTAGGATTTCCTTATGGCATGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: IRMLIEEGVRTL*TQGRISLWHGQ Trigger: CTGTCCATGCCATAAGGAAATCCTACCTTGAGTTCAAAGGGTCCTCACCCCCTCCTCGATTAGCATCCGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS CCA 72 bp | GAGGCAGGCCTGAGGAAACGAAGGAGGTCTAAAACATaGCTTGCTACATCTTCTATCTCTGCAACAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAGLRKRRRSKT*LATSSISATAA Trigger: AGCAGCTGTTGCAGAGATAGAAGATGTAGCAAGCCATGTTTTAGACCTCCTTCGTTTCCTCAGGCCTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 72 bp | TGCAGCGGCATCTGCAAGCTGGGAGAGAGGCACAACTaGTGTCATTCTCTGACTCTTGAGAAAGGAAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSGICKLGERHN*CHSLTLEKGKE Trigger: TTCTTTTCCTTTCTCAAGAGTCAGAGAATGACACAAGTTGTGCCTCTCTCCCAGCTTGCAGATGCCGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000154496.3 |
||
| CDS CAA 90 bp | ATACAATACATATGCCCTGTAGATAGAGAGGAAGCGTCTTCTGAATaGCAGTCAGCATGGGTCCAGGCAGCTCCTTGTCTTGCTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IQYICPVDREEASSE*QSAWVQAAPCLAVA Trigger: TGCTACAGCAAGACAAGGAGCTGCCTGGACCCATGCTGACTGCAATTCAGAAGACGCTTCCTCTCTATCTACAGGGCATATGTATTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS TCA 72 bp | TGCTTGGGATCGTCTGGGCTGGGTAATTGCTCTATTTaGGCCTTTGAGAAGACACTCTTTACTTCTGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: CLGSSGLGNCSI*AFEKTLFTSES Trigger: ACTCTCAGAAGTAAAGAGTGTCTTCTCAAAGGCTCAAATAGAGCAATTACCCAGCCCAGACGATCCCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS GCA 72 bp | AATGTCCAAGTTTTTCTGGGCATACATCAGGAGAAATaGCATCTGACCCTTCCAAACAAGGGCTCCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NVQVFLGIHQEK*HLTLPNKGSMR Trigger: TCTCATGGAGCCCTTGTTTGGAAGGGTCAGATGGCATTTCTCCTGATGTATGCCCAGAAAAACTTGGACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CCA 72 bp | CTAATCCACCAACTAAAGCCTAATGGATCCTTGGCCTaGGTTAGAGACACAGAAGATCTTCGTTGGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LIHQLKPNGSLA*VRDTEDLRWSL Trigger: AAGTGACCAACGAAGATCTTCTGTGTCTCTAACCCAGGCCAAGGATCCATTAGGCTTTAGTTGGTGGATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
||
| CDS CAA 72 bp | CAGTTCCTCACCAGTGTAAGCATCGACAGTGGAGACTaGATAATATTGGTAAGGCCTTTCAAAGGAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QFLTSVSIDSGD*IILVRPFKGSQ Trigger: CTGGCTTCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCCACTGTCGATGCTTACACTGGTGAGGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 90 bp | CAGTTCCTCACCAGTGTAAGCATCGACAGTGGAGACTTGATAATATaGGTAAGGCCTTTCAAAGGAAGCCAGGAAATACTGAAGGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QFLTSVSIDSGDLII*VRPFKGSQEILKEL Trigger: TAGCTCCTTCAGTATTTCCTGGCTTCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCCACTGTCGATGCTTACACTGGTGAGGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 90 bp | TCACTACAGCAGTTCCTCACCAGTGTAAGCATCGACAGTGGAGACTaGATAATATTGGTAAGGCCTTTCAAAGGAAGCCAGGAAATACTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQQFLTSVSIDSGD*IILVRPFKGSQEIL Trigger: CAGTATTTCCTGGCTTCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCCACTGTCGATGCTTACACTGGTGAGGAACTGCTGTAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS TCA 72 bp | AGAACCCATAATTCTTTAACACAGGAGCATGGGCAGTaGCTAATCAGTAGTGCTTCTGAAGGCATGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTHNSLTQEHGQ*LISSASEGMTL Trigger: CAAGGTCATGCCTTCAGAAGCACTACTGATTAGTCACTGCCCATGCTCCTGTGTTAAAGAATTATGGGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS TCA 72 bp | CTTCTGTGCTTTAGAGGTGGCAAAGATGTGTGCCCATaGCTTAACAAGAATTCCCATTATCCCGTAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLCFRGGKDVCP*LNKNSHYPVSQ Trigger: CTGACTTACGGGATAATGGGAATTCTTGTTAAGTCATGGGCACACATCTTTGCCACCTCTAAAGCACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS GCA 72 bp | ACTACACATTGTTGCCTAATACTGTCTGCTTTGGCGTaGAAGGTGGCTATTTTCCCAAAATCACAGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: TTHCCLILSALA*KVAIFPKSQLT Trigger: AGTCAGCTGTGATTTTGGGAAAATAGCCACCTTGCACGCCAAAGCAGACAGTATTAGGCAACAATGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS GCA 72 bp | GTGAAGGAACACTACACATTGTTGCCTAATACTGTCTaGTTTGGCGTGCAAGGTGGCTATTTTCCCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: VKEHYTLLPNTV*FGVQGGYFPKI Trigger: GATTTTGGGAAAATAGCCACCTTGCACGCCAAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTCCTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS GCA 72 bp | AACTTGCTTCCAAGGGTGAGGGCCGCTGGTTCTCATTaGTTTCTTAACAACTTTTGCCAGAATGCAAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NLLPRVRAAGSH*FLNNFCQNAKK Trigger: TTTCTTTGCATTCTGGCAAAAGTTGTTAAGAAAGCAATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 72 bp | AGGAACACTACACATTGTTGCCTAATACTGTCTGCTTaGGCGTGCAAGGTGGCTATTTTCCCAAAATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RNTTHCCLILSA*ACKVAIFPKSQ Trigger: CTGTGATTTTGGGAAAATAGCCACCTTGCACGCCAAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS TCA 72 bp | AAATGCCATGATGGAGGGAAGAGCTTCATCTGGTTTTaGTTTACAAACGCTCCTACAGTAACACTGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KCHDGGKSFIWF*FTNAPTVTLGS Trigger: ACTTCCCAGTGTTACTGTAGGAGCGTTTGTAAATCAAAACCAGATGAAGCTCTTCCCTCCATCATGGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000172622.8 |
||
| CDS TCA 72 bp | ACACCATGGCGATCAATCTGGTACAATGATGCTACATaGACACTAATCCACCAACTAAAGCCTAATGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: TPWRSIWYNDAT*TLIHQLKPNGS Trigger: GGATCCATTAGGCTTTAGTTGGTGGATTAGTGTTCATGTAGCATCATTGTACCAGATTGATCGCCATGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
||
| CDS CAA 72 bp | GTGCAAGGTGGCTATTTTCCCAAAATCACAGCTGACTaGTACCAAGGACTCCAAGTTAAATATCTGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VQGGYFPKITAD*YQGLQVKYLLP Trigger: AGGCAACAGATATTTAACTTGGAGTCCTTGGTACAAGTCAGCTGTGATTTTGGGAAAATAGCCACCTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS CAA 72 bp | ACCAGTGTAAGCATCGACAGTGGAGACTTGATAATATaGGTAAGGCCTTTCAAAGGAAGCCAGGAAATACTG | + |
|
Preference number: 6 (lower is better) Translates to: TSVSIDSGDLII*VRPFKGSQEIL Trigger: CAGTATTTCCTGGCTTCCTTTGAAAGGCCTTACCAATATTATCAAGTCTCCACTGTCGATGCTTACACTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS GCA 72 bp | CATTTGGATTTTGAGACTGGCAGCATACAATACATATaGCCTGTAGATAGAGAGGAAGCGTCTTCTGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: HLDFETGSIQYI*PVDREEASSEL Trigger: CAATTCAGAAGACGCTTCCTCTCTATCTACAGGGCATATGTATTGTATGCTGCCAGTCTCAAAATCCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS GCA 72 bp | CAACGTGCTGATTCAGCGTTGCTACTGTCTCTAGGATaGTGTATACTTGATAACTGTATTGCATACCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: QRADSALLLSLG*CILDNCIAYHS Trigger: ACTATGGTATGCAATACAGTTATCAAGTATACAGCATCCTAGAGACAGTAGCAACGCTGAATCAGCACGTTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 |
||
| CDS CCA 72 bp | TCCTTGGCCTGGGTTAGAGACACAGAAGATCTTCGTTaGTCACTTGACTTTTCAAAAAGTGTTCTAAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLAWVRDTEDLR*SLDFSKSVLSS Trigger: ACTACTTAGAACACTTTTTGAAAAGTCAAGTGACCAACGAAGATCTTCTGTGTCTCTAACCCAGGCCAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
||
| CDS CAA 90 bp | ACACCTGAAGATGAAAACTTTAATGTAGTGAAGGAACACTACACATaGTTGCCTAATACTGTCTGCTTTGGCGTGCAAGGTGGCTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPEDENFNVVKEHYT*LPNTVCFGVQGGYF Trigger: AAAATAGCCACCTTGCACGCCAAAGCAGACAGTATTAGGCAACAATGTGTAGTGTTCCTTCACTACATTAAAGTTTTCATCTTCAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000138567.9 ENSMUST00000172622.8 |
||
| CDS TCA 72 bp | TTCAAAGGAAGCCAGGAAATACTGAAGGAGCTATTCTaGACAGTGACGGACCGTTTCAAAAGTTCTTCTATA | + |
|
Preference number: 6 (lower is better) Translates to: FKGSQEILKELF*TVTDRFKSSSI Trigger: TATAGAAGAACTTTTGAAACGGTCCGTCACTGTTCAGAATAGCTCCTTCAGTATTTCCTGGCTTCCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050446.13 |
||
| CDS TCA 72 bp | TTAGAATATATTCTTCCTTTAACTTGCTTCCAAGGGTaGGGGCCGCTGGTTCTCATTGCTTTCTTAACAACT | + |
|
Preference number: 6 (lower is better) Translates to: LEYILPLTCFQG*GPLVLIAFLTT Trigger: AGTTGTTAAGAAAGCAATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGTTAAAGGAAGAATATATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS GCA 72 bp | TGGTCTCAAATACTTCTTGAACACCATCAATATAGATaGAAAGCAGTGTCCATAGAGCATGTCTCTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: WSQILLEHHQYR*KAVSIEHVSVP Trigger: TGGTACAGAGACATGCTCTATGGACACTGCTTTGCATCTATATTGATGGTGTTCAAGAAGTATTTGAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 72 bp | TTTTTGATGAAACTTAGAATATATTCTTCCTTTAACTaGCTTCCAAGGGTGAGGGCCGCTGGTTCTCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLMKLRIYSSFN*LPRVRAAGSHC Trigger: GCAATGAGAACCAGCGGCCCTCACCCTTGGAAGCAAGTTAAAGGAAGAATATATTCTAAGTTTCATCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
||
| CDS CAA 72 bp | AGAAGGATACAAGCAACTGCTGGTCTCAAATACTTCTaGAACACCATCAATATAGATGCAAAGCAGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRIQATAGLKYF*NTINIDAKQCP Trigger: TGGACACTGCTTTGCATCTATATTGATGGTGTTCAAGAAGTATTTGAGACCAGCAGTTGCTTGTATCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
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| CDS TCA 72 bp | AGTAACATGCTAAATCCATCATTGAGAAGATGCTCATaGGAAGGATACAAGCAACTGCTGGTCTCAAATACT | + |
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Preference number: 6 (lower is better) Translates to: SNMLNPSLRRCS*EGYKQLLVSNT Trigger: AGTATTTGAGACCAGCAGTTGCTTGTATCCTTCTCATGAGCATCTTCTCAATGATGGATTTAGCATGTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
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| CDS CAA 90 bp | AAAAGTTCTTCTATAAAGCTCCAATTGGATTCCATCTGTTTCATTTaGTCTGACACACCATGGCGATCAATCTGGTACAATGATGCTACA | + |
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Preference number: 6 (lower is better) Translates to: KSSSIKLQLDSICFI*SDTPWRSIWYNDAT Trigger: TGTAGCATCATTGTACCAGATTGATCGCCATGGTGTGTCAGACAAAATGAAACAGATGGAATCCAATTGGAGCTTTATAGAAGAACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
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| CDS TCA 72 bp | AGATGCATTCGCAATTGTTCTTCTAGTATACTATCCTaGACAGTGACGGACCGTTTCAAAAGTTCTTCTATA | + |
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Preference number: 6 (lower is better) Translates to: RCIRNCSSSILS*TVTDRFKSSSI Trigger: TATAGAAGAACTTTTGAAACGGTCCGTCACTGTTCAGGATAGTATACTAGAAGAACAATTGCGAATGCATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
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| CDS CAA 72 bp | ACCTGCCTGACCAATAAACTGACGACCATAAACAACTaGTTTCAATTTTTCTCCCAGAATATGCAGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: TCLTNKLTTINN*FQFFSQNMQYF Trigger: GAAATACTGCATATTCTGGGAGAAAAATTGAAACAAGTTGTTTATGGTCGTCAGTTTATTGGTCAGGCAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000172622.8 |
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| CDS TCA 72 bp | TTTGGCTCCCAGAAATCACAAAGTGTCAAACAACAATaGAGATGCATTCGCAATTGTTCTTCTAGTATACTA | + |
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Preference number: 6 (lower is better) Translates to: FGSQKSQSVKQQ*RCIRNCSSSIL Trigger: TAGTATACTAGAAGAACAATTGCGAATGCATCTTCATTGTTGTTTGACACTTTGTGATTTCTGGGAGCCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108222.9 ENSMUST00000131282.4 ENSMUST00000172622.8 |
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| CDS TCA 72 bp | AATGACTTAAATATCTTGCTACAACTTGGGGCCAGATaGTATCATCCCAACCAAAAAGCTGAATTATTGATA | + |
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Preference number: 6 (lower is better) Translates to: NDLNILLQLGAR*YHPNQKAELLI Trigger: TATCAATAATTCAGCTTTTTGGTTGGGATGATATCATCTGGCCCCAAGTTGTAGCAAGATATTTAAGTCATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050446.13 ENSMUST00000108222.9 ENSMUST00000131282.4 |
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