RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMS19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025159

Ensembl transcript IDs: ENSMUST00000026168.9, ENSMUST00000163287.8, ENSMUST00000163398.8, ENSMUST00000164776.8, ENSMUST00000166090.8, ENSMUST00000167927.8, ENSMUST00000168484.8, ENSMUST00000169765.2, ENSMUST00000169775.8, ENSMUST00000171561.8

Found 766 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGATTCAGAGGCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTaGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTGCTTGTTGAGG +
Preference number: 1 (lower is better)
Translates to: EDSEARPASTVPTAS*RNSSNCCPGGCLLR
Trigger: CCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGCCTCTGAATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 90 bp TGTGCTTGTGGAACTGTTCCAGCAGCAAGGGAAGCACGTTGCTGGTaGGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGCTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: CACGTVPAAREARCW*GAHRPGQTHLQLPA
Trigger: TGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCTGCTGGAACAGTTCCACAAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp CCCACAGCGAGCTGGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCAAAGCACTTAGTGGCGGCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: PTASWRNSSNCCPGG*LLRSPAKHLVAAVE
Trigger: CTCCACTGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 90 bp GGCAGGGAGCAGACAAAAGCCGTAAGTAGTGCAACCAGCCGCCTCTaGCCAGAGGAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: GREQTKAVSSATSRL*PEEPSWNGWNWSGK
Trigger: CTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGCACTACTTACGGCTTTTGTCTGCTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 90 bp GCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTGAGGAGCCCTGCAAAGCACTTAGTG +
Preference number: 1 (lower is better)
Translates to: ASTVPTASWRNSSNC*PGGCLLRSPAKHLV
Trigger: CACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 90 bp GCAGGACAGACACGCAGTCAGGGAGTGGAGAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGCAGTCTGGAAAACCTGTCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: AGQTRSQGVESCQAL*LYSLTSSLENLSGR
Trigger: CCTTCCTGACAGGTTTTCCAGACTGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTGTCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR GCA 90 bp GTTGCTGGTGAGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCTAGGCCATACAAGTTTCATGTCTGG +
Preference number: 1 (lower is better)
Translates to: VAGEVLTGPGRRTCS*LQQLSARPYKFHVW
Trigger: CCAGACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp GCCCCATGGGAATGGGATGAGCTGGGACCCTCCTCCCTGGGTGACTaGTCACTCAGCCTCTGTGATGGCCGTGTAAGCCACAACTTGAAC +
Preference number: 1 (lower is better)
Translates to: APWEWDELGPSSLGD*SLSLCDGRVSHNLN
Trigger: GTTCAAGTTGTGGCTTACACGGCCATCACAGAGGCTGAGTGAGCAGTCACCCAGGGAGGAGGGTCCCAGCTCATCCCATTCCCATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 90 bp CCTAGGTGTGGACACAGGAAGGTAAGTACAGACAGAGCGGGGCCGTaGAACAGAACCGTGATGGGGAGGTGGTCCACACCCAGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: PRCGHRKVSTDRAGP*NRTVMGRWSTPRRE
Trigger: CTCTCTCCTGGGTGTGGACCACCTCCCCATCACGGTTCTGTTGCACGGCCCCGCTCTGTCTGTACTTACCTTCCTGTGTCCACACCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 90 bp CCTGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTaGAGCTGGGTGCTGGGGTCTGTTAGAGCCATGAACACCAATGAG +
Preference number: 1 (lower is better)
Translates to: PGWAPKTVSVRMPTS*SWVLGSVRAMNTNE
Trigger: CTCATTGGTGTTCATGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR TCA 90 bp CAAGTGTCTGCTGAAGGCTCCAGGATACAGAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCACCCAACTCTGGGAATCTTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: QVSAEGSRIQSGQGS*CLQCGHPTLGIFLQ
Trigger: CTGGAGGAAGATTCCCAGAGTTGGGTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAGCCTTCAGCAGACACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp CTGGTGAGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGCCATACAAGTTTCATGTCTGGTTCA +
Preference number: 1 (lower is better)
Translates to: LVRCSQARADAPAAA*NSLALGHTSFMSGS
Trigger: TGAACCAGACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp AAGCACGTTGCTGGTGAGGTGCTCACAGGCCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTTAGCGCTAGGCCATACAAGTTTCAT +
Preference number: 1 (lower is better)
Translates to: KHVAGEVLTGPGRRT*SCLQQLSARPYKFH
Trigger: ATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp GAACTCCTCCAACTGCTGCCCTGGAGGCTGCTTGTTGAGGAGCCCTaGAAAGCACTTAGTGGCGGCAGTGGAGGAGAAAGGACAGCTGTG +
Preference number: 1 (lower is better)
Translates to: ELLQLLPWRLLVEEP*KALSGGSGGERTAV
Trigger: CACAGCTGTCCTTTCTCCTCCACTGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 90 bp GCAGGACAGACACGCAGTCAGGGAGTGGAGAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGCAGTCTGGAAAACCTCTCTACGGAT +
Preference number: 1 (lower is better)
Translates to: AGQTRSQGVESCQAL*LYSLTSSLENLSTD
Trigger: ATCCGTAGAGAGGTTTTCCAGACTGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTGTCTGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CCA 90 bp AGACATGAGCAGAGAGAAGCCATCAGCTGCTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCATGAGCCGGGTGGTCAGGCAGGCACT +
Preference number: 1 (lower is better)
Translates to: RHEQREAISCCTAKF*ITEEAHEPGGQAGT
Trigger: AGTGCCTGCCTGACCACCCGGCTCATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 90 bp GTGCTGTTACCTTCTAGTCACCTGCCCCATGGGAATGGGATGAGCTaGGACCCTCCTCCCTGGGTGACTGCTCACTCAGCCTCTGTGATG +
Preference number: 1 (lower is better)
Translates to: VLLPSSHLPHGNGMS*DPPPWVTAHSASVM
Trigger: CATCACAGAGGCTGAGTGAGCAGTCACCCAGGGAGGAGGGTCCCAGCTCATCCCATTCCCATGGGGCAGGTGACTAGAAGGTAACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 90 bp CAAGTGTCTGCTGAAGGCTCCAGGATACAGAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCACCCTACAACTCTGGGAATCTTCCTC +
Preference number: 1 (lower is better)
Translates to: QVSAEGSRIQSGQGS*CLQCGHPTTLGIFL
Trigger: GAGGAAGATTCCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAGCCTTCAGCAGACACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 90 bp GCAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTTGCTGGCTAGCTaGTCTTGCCAAAGCAGCACGTTTGAGGTTCCCTGGGAAATCCTG +
Preference number: 1 (lower is better)
Translates to: AVQPSGDRAPGLLAS*SCQSSTFEVPWEIL
Trigger: CAGGATTTCCCAGGGAACCTCAAACGTGCTGCTTTGGCAAGATCAGCTAGCCAGCAAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 90 bp TGGAGAGCTGCCAGGCCCTCTGCCTCTACTCGCTCACTAGCAGTCTaGAAAACCTGTCAGGAAGGGATCCCATGGCTCTCTACGGATGGA +
Preference number: 1 (lower is better)
Translates to: WRAARPSASTRSLAV*KTCQEGIPWLSTDG
Trigger: TCCATCCGTAGAGAGCCATGGGATCCCTTCCTGACAGGTTTTCCAGACTGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR TCA 90 bp CCACACGGGATTAGAAGAATAGCTTTTGTGGGTGTGCACGGTCTCTaGATCAGCTACGAGGGTGAGCCAGGAAGCCCCGAGGATCCTCCC +
Preference number: 1 (lower is better)
Translates to: PHGIRRIAFVGVHGL*ISYEGEPGSPEDPP
Trigger: GGGAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTAGCTGATTCAGAGACCGTGCACACCCACAAAAGCTATTCTTCTAATCCCGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR TCA 90 bp CTACAACTCTGGGAATCTTCCTCCAGGAAGGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGGC +
Preference number: 1 (lower is better)
Translates to: LQLWESSSRKVSRYR*PTASSKSSADRRPG
Trigger: GCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 90 bp CACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTGCTaGACAGCCAAGTTCTGGATCACTGAGGAGGCCCATGAGCCGGGT +
Preference number: 1 (lower is better)
Translates to: HISAVRHEQREAISC*TAKFWITEEAHEPG
Trigger: ACCCGGCTCATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 90 bp CAACACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGGATCACTGAGGAGGCCCATGAGCCG +
Preference number: 1 (lower is better)
Translates to: QHISAVRHEQREAIS*CTAKFWITEEAHEP
Trigger: CGGCTCATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 90 bp GCCTGTCCACAGCAGGGAAAGTGGTCTGTCCACAGAAGCAGAGACTaGTTAGTGCCACCGGAGTCTGCCATTAGGTTTTACCCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: ACPQQGKWSVHRSRD*LVPPESAIRFYPQV
Trigger: CACCTGAGGGTAAAACCTAATGGCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTTTCCCTGCTGTGGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp TTGCATCTTAGTTCTGTGGCCCTGGCCCTGGGTGCCCTAACCATGTaGCATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGG +
Preference number: 1 (lower is better)
Translates to: LHLSSVALALGALTM*HAVLISRGETSIER
Trigger: CCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGCCACATGGTTAGGGCACCCAGGGCCAGGGCCACAGAACTAAGATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 90 bp GCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCAGTAGCACAGAAGTGGGGAGGCGAG +
Preference number: 1 (lower is better)
Translates to: AQVSSCRPEAWLRLG*PEICMAVAQKWGGE
Trigger: CTCGCCTCCCCACTTCTGTGCTACTGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR CCA 90 bp ATGATGCTGAAGACAGTATGGCGGTCCACCTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACAGAGACAGCCAGACCCGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: MMLKTVWRSTCTCTS*KMALSTETARPGGR
Trigger: CCTGCCTCCGGGTCTGGCTGTCTCTGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACAGGTGGACCGCCATACTGTCTTCAGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163398.8
3UTR CCA 90 bp TGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTaGCGGAACATGATCCGAACATCAGCATGGCCGGCACGAGTCAAC +
Preference number: 1 (lower is better)
Translates to: WKPWTKAGTLSVKNR*RNMIRTSAWPARVN
Trigger: GTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 90 bp GGTGCTTCCAGTAGTAGGGGTTGGAGACAGCTCAGAGTGGAAAGCTaGACCACAGAGTCAGGGCAGGATAATGCTTCCAGCAGCAAGGAA +
Preference number: 1 (lower is better)
Translates to: GASSSRGWRQLRVES*TTESGQDNASSSKE
Trigger: TTCCTTGCTGCTGGAAGCATTATCCTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCCAACCCCTACTACTGGAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 90 bp AGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGATGACCTaGGATTTGTATGGCAGTAGCACAGAAGTGGGGAGGCGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: SLFLSSRGLAKARMT*DLYGSSTEVGRRVR
Trigger: TCTCACTCGCCTCCCCACTTCTGTGCTACTGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR CCA 90 bp AAAGCCAGCAGGAGATTACGGGGATCCTTCTCCCCATCCATCACCTaGATGAAGCCAAATGTGAAGTCAGCTCCCAGACCCTTCAGCTCT +
Preference number: 1 (lower is better)
Translates to: KASRRLRGSFSPSIT*MKPNVKSAPRPFSS
Trigger: AGAGCTGAAGGGTCTGGGAGCTGACTTCACATTTGGCTTCATCCAGGTGATGGATGGGGAGAAGGATCCCCGTAATCTCCTGCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CCA 90 bp TTGTCTGTGAAGAACCGCTGGCGGAACATGATCCGAACATCAGCATaGCCGGCACGAGTCAACACATCAGTGCAGTCAGACATGAGCAGA +
Preference number: 1 (lower is better)
Translates to: LSVKNRWRNMIRTSA*PARVNTSVQSDMSR
Trigger: TCTGCTCATGTCTGACTGCACTGATGTGTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 90 bp GAAGTGTGGGCAGCTCTGGTAAAAGCACAGGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTG +
Preference number: 1 (lower is better)
Translates to: EVWAALVKAQAWAAC*VRETDPSDSLASHL
Trigger: CAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACCAGAGCTGCCCACACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 90 bp CTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGACCATCTGCTCTAGCCACATCTGAC +
Preference number: 1 (lower is better)
Translates to: LGCVETADKACRQRK*REHLVGPSALATSD
Trigger: GTCAGATGTGGCTAGAGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp CCCAGGAGAGAGACTGTAATTGAGCTGAAGCTAAAGCTAGTGCTGTaGATTAAACTCCCACAACAGGGAAAGCGGCCTGTCCACAGCAGG +
Preference number: 1 (lower is better)
Translates to: PRRETVIELKLKLVL*IKLPQQGKRPVHSR
Trigger: CCTGCTGTGGACAGGCCGCTTTCCCTGTTGTGGGAGTTTAATGCACAGCACTAGCTTTAGCTTCAGCTCAATTACAGTCTCTCTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp CAAACTCCAGAAGCCAGAGGCACTCATACACACTCCTTCTACATGTaGCTCGGGGCTTTGGTGGCTTGGATGAGATGTCTGTCTCTGGTA +
Preference number: 1 (lower is better)
Translates to: QTPEARGTHTHSFYM*LGALVAWMRCLSLV
Trigger: TACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGAGTGTGTATGAGTGCCTCTGGCTTCTGGAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CCA 90 bp ATATTTGGAGATCAGCTTTCACCTTGGGGAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAAC +
Preference number: 1 (lower is better)
Translates to: IFGDQLSPWGAAWKP*TKAGTLSVKNRWRN
Trigger: GTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 90 bp CTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCACTGGACTCTGTAACCATATTCCCT +
Preference number: 1 (lower is better)
Translates to: LSGSCWHFSATCWRL*QTATTSLDSVTIFP
Trigger: AGGGAATATGGTTACAGAGTCCAGTGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 90 bp CAAATAACTCTTCCACGAAAGGTCCCAGACTGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGAAAGCCAGCAGGAGATTACGGGGAT +
Preference number: 1 (lower is better)
Translates to: QITLPRKVPDCSPWR*GHGRCGKPAGDYGD
Trigger: ATCCCCGTAATCTCCTGCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAAGGACTACAGTCTGGGACCTTTCGTGGAAGAGTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR TCA 90 bp GAAGTGTGGGCAGCTCTGGTAAAAGCACAGGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTT +
Preference number: 1 (lower is better)
Translates to: EVWAALVKAQAWAAC*VRETDPSDSLASHL
Trigger: AAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACCAGAGCTGCCCACACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR GCA 90 bp GTCTCCTTGACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGGGAACATTTGGTGGGACCATCTGCT +
Preference number: 1 (lower is better)
Translates to: VSLTMLGCVETADKA*RQRKCREHLVGPSA
Trigger: AGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGTCAAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 90 bp CTTGTGGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTaGCACCTGCTGGAGACTCTGACAGACAGCAACAACTTCACTGGA +
Preference number: 1 (lower is better)
Translates to: LVEIPVALRVLLAFF*HLLETLTDSNNFTG
Trigger: TCCAGTGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 90 bp CAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGCTC +
Preference number: 1 (lower is better)
Translates to: QTSSLALWDGSIVST*RLDCQEGLGQDQGL
Trigger: GAGCCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 90 bp GAGGGTAGCAGTCAGATGAATCTGTGTCAGTCCTTCCTTCCTCTTTaGCCCATCGTCACCACATTCCCACCTCTACTGTGCTTGCAATCT +
Preference number: 1 (lower is better)
Translates to: EGSSQMNLCQSFLPL*PIVTTFPPLLCLQS
Trigger: AGATTGCAAGCACAGTAGAGGTGGGAATGTGGTGACGATGGGGCAAAGAGGAAGGAAGGACTGACACAGATTCATCTGACTGCTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp GAGGTCCATATATTTGGAGATCAGCTTTCACCTTGGGGAGCGGCATaGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGC +
Preference number: 1 (lower is better)
Translates to: EVHIFGDQLSPWGAA*KPWTKAGTLSVKNR
Trigger: GCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATATGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 90 bp AGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTTCAGGAATTTTGTAACCAGAGTGTC +
Preference number: 1 (lower is better)
Translates to: SESVHTLQSSNPDSH*VTGAEVQEFCNQSV
Trigger: GACACTCTGGTTACAAAATTCCTGAACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR GCA 90 bp GGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTaGCTTAGAGTACTACACAGGGACAATCAAGACCAATCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: GQLFLESMTMKSHQA*LRVLHRDNQDQSSA
Trigger: GGCAGAAGATTGGTCTTGATTGTCCCTGTGTAGTACTCTAAGGCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 90 bp TTCCTTCCTCTTTGCCCCATCGTCACCACATTCCCACCTCTACTGTaGTTGCAATCTCTTAAAAGATTGTGGCTGGTAATGGCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: FLPLCPIVTTFPPLL*LQSLKRLWLVMAAH
Trigger: GTGGGCTGCCATTACCAGCCACAATCTTTTAAGAGATTGCAAGCACAGTAGAGGTGGGAATGTGGTGACGATGGGGCAAAGAGGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp ACTCATACACACTCCTTCTACATGTGGCTCGGGGCTTTGGTGGCTTaGATGAGATGTCTGTCTCTGGTAAGTCTGGCATTTGAGGACCTA +
Preference number: 1 (lower is better)
Translates to: THTHSFYMWLGALVA*MRCLSLVSLAFEDL
Trigger: TAGGTCCTCAAATGCCAGACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGAGTGTGTATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CCA 90 bp TGGCCAAGAGTAGAGGTCCATATATTTGGAGATCAGCTTTCACCTTaGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCT +
Preference number: 1 (lower is better)
Translates to: WPRVEVHIFGDQLSP*GAAWKPWTKAGTLS
Trigger: AGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATATGGACCTCTACTCTTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 90 bp ACCACATTCCCACCTCTACTGTGCTTGCAATCTCTTAAAAGATTGTaGCTGGTAATGGCAGCCCACGCCTGGAATCCCAGCACTTCAAGA +
Preference number: 1 (lower is better)
Translates to: TTFPPLLCLQSLKRL*LVMAAHAWNPSTSR
Trigger: TCTTGAAGTGCTGGGATTCCAGGCGTGGGCTGCCATTACCAGCCACAATCTTTTAAGAGATTGCAAGCACAGTAGAGGTGGGAATGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp TCTTCTCGTGATCGCATGAAGTTAGTGATGATGCTGAAGACAGTATaGCGGTCCACCTGTAGCAGGGACTGTACATGTACCTCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: SSRDRMKLVMMLKTV*RSTCSRDCTCTSWK
Trigger: CTTCCAGGAGGTACATGTACAGTCCCTGCTACAGGTGGACCGCCATACTGTCTTCAGCATCATCACTAACTTCATGCGATCACGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164776.8
3UTR GCA 90 bp CCAACAGTACTTTTCTCAGAACTGAGGATTCCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: PTVLFSELRIPGIEA*TANANRQGTAVLWK
Trigger: TTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGGAATCCTCAGTTCTGAGAAAAGTACTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR GCA 90 bp AGTACTTTTCTCAGAACTGAGGATTCCTTCTCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: STFLRTEDSFSGIEA*TANANRQGTAVLWK
Trigger: TTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 90 bp CCGCATGAGTCGGTTCAGCTGAGGGATTTCCACCTACAGAAAACCTaGCCATGTAATGGACCCAGAAGACACTTGAACTCTAAGAAATAC +
Preference number: 1 (lower is better)
Translates to: PHESVQLRDFHLQKT*PCNGPRRHLNSKKY
Trigger: GTATTTCTTAGAGTTCAAGTGTCTTCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTGGAAATCCCTCAGCTGAACCGACTCATGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 90 bp CTCGGTGTGTGCTTCTCTAGCATCTGTAGAATAAGGCAGTACACGTaGGTGTGCCCATTACAAAGAAGGCTTTATTCTCTGGCAGGTGAA +
Preference number: 1 (lower is better)
Translates to: LGVCFSSICRIRQYT*VCPLQRRLYSLAGE
Trigger: TTCACCTGCCAGAGAATAAAGCCTTCTTTGTAATGGGCACACTCACGTGTACTGCCTTATTCTACAGATGCTAGAGAAGCACACACCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp CATACACAGCACAGCAAGCATTCAGAGTTTGCAGAGAATCCAGCTTaGCACTTAAAATCTCCGAATCCACTTTCTCAATTAGCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: HTQHSKHSEFAENPA*HLKSPNPLSQLAEA
Trigger: TGCCTCTGCTAATTGAGAAAGTGGATTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGCTGTGCTGTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR CCA 90 bp CACCTGCTGTTAAGCCTGATTAGCATTCAATCATTGGAAGCTACATaGTGGAAGGAGAGACTTCCACAGACATATTGTGGCAAGCAATTA +
Preference number: 1 (lower is better)
Translates to: HLLLSLISIQSLEAT*WKERLPQTYCGKQL
Trigger: TAATTGCTTGCCACAATATGTCTGTGGAAGTCTCTCCTTCCACCATGTAGCTTCCAATGATTGAATGCTAATCAGGCTTAACAGCAGGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 90 bp CTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTaGCTTCTCAACGGGACAAAGACAGTAAGCCTATTGCCAAGGTCA +
Preference number: 1 (lower is better)
Translates to: LSFTLGKDPSGMLKL*LLNGTKTVSLLPRS
Trigger: TGACCTTGGCAATAGGCTTACTGTCTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 90 bp ATCCCTGGAACCCATTTGGTACAACTAACTTGGTTAGCTGTTCTTTaGCCTCCAGGTATACATATCTTTGTGCATGTACACACATACCAC +
Preference number: 1 (lower is better)
Translates to: IPGTHLVQLTWLAVL*PPGIHIFVHVHTYH
Trigger: GTGGTATGTGTGTACATGCACAAAGATATGTATACCTGGAGGTCAAAGAACAGCTAACCAAGTTAGTTGTACCAAATGGGTTCCAGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 90 bp TGTATCAACCACAACCAGCCAACAGGTGTCTTAAAAGCTAGACTTTaGTTACAGGAATTCCATCATCTCCAAGATGAGGAGGAGATTAAG +
Preference number: 1 (lower is better)
Translates to: CINHNQPTGVLKARL*LQEFHHLQDEEEIK
Trigger: CTTAATCTCCTCCTCATCTTGGAGATGATGGAATTCCTGTAAGCAAAGTCTAGCTTTTAAGACACCTGTTGGCTGGTTGTGGTTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 90 bp CTGCTGTTAAGCCTGATTAGCATTCAATCATTGGAAGCTACATGGTaGAAGGAGAGACTTCCACAGACATATTGTGGCAAGCAATTAATA +
Preference number: 1 (lower is better)
Translates to: LLLSLISIQSLEATW*KERLPQTYCGKQLI
Trigger: TATTAATTGCTTGCCACAATATGTCTGTGGAAGTCTCTCCTTCCACCATGTAGCTTCCAATGATTGAATGCTAATCAGGCTTAACAGCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 90 bp TGTAAGCTAACCGTAGACCACTTCCTTTCTTATGGTGTATTTGGATaGAACACCGAACTGTACAACCATAAATGTACATCCGCTTACTGT +
Preference number: 1 (lower is better)
Translates to: CKLTVDHFLSYGVFG*NTELYNHKCTSAYC
Trigger: ACAGTAAGCGGATGTACATTTATGGTTGTACAGTTCGGTGTTTCATCCAAATACACCATAAGAAAGGAAGTGGTCTACGGTTAGCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR GCA 90 bp CAGATAGAGATGAGAACTCTGTCTTTTTGTTTGATGTATGCTTGCTaGAGGGAAAATGGGAAGGACAACCAAGAACTGAGAATTAAAGAG +
Preference number: 1 (lower is better)
Translates to: QIEMRTLSFCLMYAC*RENGKDNQELRIKE
Trigger: CTCTTTAATTCTCAGTTCTTGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 90 bp ACAGAATCAGATAGAGATGAGAACTCTGTCTTTTTGTTTGATGTATaGTTGCTGCAGGGAAAATGGGAAGGACAACCAAGAACTGAGAAT +
Preference number: 1 (lower is better)
Translates to: TESDRDENSVFLFDV*LLQGKWEGQPRTEN
Trigger: ATTCTCAGTTCTTGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATCTGATTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR TCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCAC +
Preference number: 2 (lower is better)
Translates to: GTQDCERPDANKLKLGAGSGQGS*CLQCGH
Trigger: GTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACT...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GGCCCGGGCAGACGCACCTGCAGCTGCCTGCAACAGCTTAGCGCTAGGCCATACGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGC +
Preference number: 2 (lower is better)
Translates to: GPGRRTCSCLQQLSARPYAPAAA*NSLALG
Trigger: GCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGC...GTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCT +
Preference number: 2 (lower is better)
Translates to: ARPASTVPTASWRNSSNCRRTCS*LQQLSA
Trigger: AGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCT...GCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGC +
Preference number: 2 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPAPAAA*NSLALG
Trigger: GCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGC...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CAAGGGAAGCACGTTGCTGGTGAGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCT +
Preference number: 2 (lower is better)
Translates to: QGKHVAGEVLTGPGRRTCRRTCS*LQQLSA
Trigger: AGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCT...GCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGTGCTTCCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp ACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCCACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: TQDCERPDANKLKLGAGVHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...GACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: ARPASTVPTASWRNSSNCSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...GCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CAA 90 bp GCGAGCTGGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCACTTAGTGGCGGCAGTGGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: ASWRNSSNCCPGGCL*RSPAKHLVAAVEEK
Trigger: TTTCTCCTCCACTGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp GTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGGCTGGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 2 (lower is better)
Translates to: VQVTYCQLQVLSRQETWLGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...CAGCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp TGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: WLGTQDCERPDANKLKLGVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...ACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GTGGCCACAGCTCTGCTTCAAAAGCTCCCGCATGAGTCGGTTCAGCTGAGGGATACGTTGCTGGTGAGGTaGTCACAGGCCCGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: VATALLQKLPHESVQLRDTLLVR*SQARAD
Trigger: GTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGT...ATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: GTQDCERPDANKLKLGAGGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR TCA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 2 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp TATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGGAACAGCTTCCTATTCCTaGCAGACACGGGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: YQQEGEAPVTGQGQGEWGTASYS*QTRESP
Trigger: GGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGT...TCCCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp GAAGAACCGCTGGCGGAACATGATCCGAACATCAGCATGGCCGGCACGAGTCAAGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGC +
Preference number: 2 (lower is better)
Translates to: EEPLAEHDPNISMAGTSQAPAAA*NSLALG
Trigger: GCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGC...TTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp TTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAACGTTGCTGGTGAGGTaGTCACAGGCCCGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LHSHAGGPAFVLHPWEGRTLLVR*SQARAD
Trigger: GTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGT...TCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GTQDCERPDANKLKLGAGWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp GCAGTCAGGGAGTGGAGAGCTGCCAGGCCCTCTGCCTCTACTCGCTCACTAGCATGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 2 (lower is better)
Translates to: AVREWRAARPSASTRSLAWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...TGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR GCA 90 bp TCCTTCTACATGTGGCTCGGGGCTTTGGTGGCTTGGATGAGATGTCTGTCTCTGCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 2 (lower is better)
Translates to: SFYMWLGALVAWMRCLSLPGRRT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGG...CAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp TGGCCAGGGTTCCTGATGCCTCCAGTGCGGCCACCCTACAACTCTGGGAATCTTTTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: WPGFLMPPVRPPYNSGNLLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...AAGATTCCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAACCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CAGTCGGTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: QSVQVTYCQLQVLSRQETLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...GGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTACCGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCAGGAACTCCTCCAACTaGTGCCCTGGAGGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: STEVGRRVRACIHCRAAIRNSSN*CPGGCL
Trigger: CAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp TCAGCAGACAGGAGACCTGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCACACATAGATGGTGCCTaGAGTCTAGAGAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SADRRPGWAPKTVSVRMPHIDGA*SLERQQ
Trigger: TTGCTGCCTCTCTAGACTGCAGGCACCATCTATGTG...TGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
3UTR-3UTR CCA 90 bp GTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGGCTGCAGGAAGGGATCCCATaGCTCTCTACGGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: VQVTYCQLQVLSRQETWLQEGIP*LSTDGS
Trigger: GCTTCCATCCGTAGAGAGCCATGGGATCCCTTCCTG...CAGCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GTGTTAGAAACTTACCCGGGTGGTCAGGCAGGCACTGAGAGGATGGTATCTGAGCACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: VLETYPGGQAGTERMVSEHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...CTCAGATACCATCCTCTCAGTGCCTGCCTGACCACCCGGGTAAGTTTCTAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp CAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: QDCERPDANKLKLGAGVCRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...ACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: STALTLQQHSFLFLTDTGDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCAGCAGACAGGAGACCTaGCTGGGCACCCAAGACTGT +
Preference number: 2 (lower is better)
Translates to: STEVGRRVRACIHCRAAISRQET*LGTQDC
Trigger: ACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCT...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp CAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTCTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 2 (lower is better)
Translates to: QDCERPDANKLKLGAGVCLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...ACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GAAGAACCGCTGGCGGAACATGATCCGAACATCAGCATGGCCGGCACGAGTCAACTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: EEPLAEHDPNISMAGTSQLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...TTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp TGGCCAGGGTTCCTGATGCCTCCAGTGCGGCCACCCTACAACTCTGGGAATCTTGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: WPGFLMPPVRPPYNSGNLDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...AAGATTCCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAACCCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164776.8
3UTR CAA 90 bp GCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTaGGGGAGCAAGTGTCTGCTGAAGGCTCCAGGATACAGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: ALATSDSPLCSSSAS*GSKCLLKAPGYRVA
Trigger: GGCCACTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp GGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: GSGMETLDQSRHIVCEEPVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: GEASESVHTLQSSNPDSHNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...ATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp ACATCTTGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGTGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: TSWGAAWKPWTKAGTLSVCCPGG*LLRSPA
Trigger: TGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCA...CACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp GGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCCAGTAGTCTTGCCTTGTaGGATGGCTCAATAGTTAGT +
Preference number: 2 (lower is better)
Translates to: GQDQGLSSPGSQVGTILPSSLAL*DGSIVS
Trigger: ACTAACTATTGAGCCATCCCACAAGGCAAGACTACT...GGGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp AGTTTGGCTTCACATCTTGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCAGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: SLASHLGERHGNLGPKQADRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...TGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp CGCTGGCGGAACATGATCCGAACATCAGCATGGCCGGCACGAGTCAACACATCACTCTCAGGGTCCTGCTaGCATTTTTCTGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: RWRNMIRTSAWPARVNTSLSGSC*HFSATC
Trigger: GCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG...TGATGTGTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGCTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: FAQPCRRPSICTASMGRQLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 2 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGTTACCTTTGTTTGCTTaGCAGAGATGCTGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GTQDCERPDANKLKLGAGLPLFA*QRCCSS
Trigger: GCTACTGCAGCATCTCTGTCAAGCAAACAAAGGTAA...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR TCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCTTCCTTCTCTGGCATTaGAGCCTGCACAGCCAATGC +
Preference number: 2 (lower is better)
Translates to: STEVGRRVRACIHCRAAIFLLWH*SLHSQC
Trigger: GCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAA...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCACAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 2 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR GCA 90 bp CAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 2 (lower is better)
Translates to: QDCERPDANKLKLGAGVCSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...ACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTGAGTAACTGGAGCAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ERAYTAEQQSGQPLSNWSRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...GCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: AWKPWTKAGTLSVKNRWRRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...CCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp CCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTTGGGGAGCAAGTGTCATGGCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: PHLTPLYAAPQQAWGASVMALYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGCCAT...GACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp CAGAGGAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTAAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: QRSHPGTAGTGQGSCFQVRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...TACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GGGGCTTTGGTGGCTTGGATGAGATGTCTGTCTCTGGTAAGTCTGGCATTTGAGGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: GALVAWMRCLSLVSLAFEDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...CTCAAATGCCAGACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp TGCACGGTCTCTGAATCAGCTACGAGGGTGAGCCAGGAAGCCCCGAGGATCCTCTCTGGTTCACATAGATaGTGCCTGCAGTCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: CTVSESATRVSQEAPRILSGSHR*CLQSRE
Trigger: CTCTCTAGACTGCAGGCACCATCTATGTGAACCAGA...GAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTAGCTGATTCAGAGACCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR CCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: STEVGRRVRACIHCRAAICTAKF*ITEEAH
Trigger: ATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCA...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CAA 90 bp TCACCTTGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGGCGGAACATGATCCGAACATCAGCA +
Preference number: 2 (lower is better)
Translates to: SPWGAAWKPWTKAGT*SVKNRWRNMIRTSA
Trigger: TGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp ACGCAGCCAAGACCTCATCCTCCAACAGTACTTTTCTCAGAACTGAGGATTCCTCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 2 (lower is better)
Translates to: TQPRPHPPTVLFSELRIPPGRRT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGG...AGGAATCCTCAGTTCTGAGAAAAGTACTGTTGGAGGATGAGGTCTTGGCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp CTGGGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTAACGTTGCTGGTGAGGTaGTCACAGGCCCGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: LGSVRAMNTNEHSWSLKLTLLVR*SQARAD
Trigger: GTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGT...TAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTTGGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: QPVEYVRQTLQIVWLHILAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...CAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp GCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTTGGGGAGCAAGTGTTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: ATSDSPLCSSSASLGSKCLEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...ACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGAAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTAGAAAGCTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 2 (lower is better)
Translates to: EPSWNGWNWSGKLFSGRKLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...CTTTCTACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp ACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGCTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TSIERHINKKERRRLQAKLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...CTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATGCCTTTCGATGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: PSRNHSPLADTASFRTSLDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp CATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGCACCTACAGAAAACCTaGCCATGTAATGGACCCAGA +
Preference number: 2 (lower is better)
Translates to: HINKKERRRLQAKGRVSGHLQKT*PCNGPR
Trigger: TCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTG...CCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CAA 90 bp GGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTAGAAAGGAAGTGTaGCCATCTAAGAAGAGGGGCACGATGCATGTGACGCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GWNWSGKLFSGRKEV*PSKKRGTMHVTLWA
Trigger: TGCCCAGAGCGTCACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTTCCCTGACCAGTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CAA 90 bp ACATCTTGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGGCGGAACATGATCCGAACATCAGCA +
Preference number: 2 (lower is better)
Translates to: TSWGAAWKPWTKAGT*SVKNRWRNMIRTSA
Trigger: TGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR TCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 2 (lower is better)
Translates to: PSRNHSPLADTASFRTSLCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR TCA 90 bp GAACATGATCCGAACATCAGCATGGCCGGCACGAGTCAACACATCAGTGCAGTCGAGGCAGTGTCTCCTTaGCAATGCTGGGATGTGTTG +
Preference number: 2 (lower is better)
Translates to: EHDPNISMAGTSQHISAVEAVSP*QCWDVL
Trigger: CAACACATCCCAGCATTGTCAAGGAGACACTGCCTC...GACTGCACTGATGTGTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: GSGMETLDQSRHIVCEEPNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGATGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 2 (lower is better)
Translates to: STALTLQQHSFLFLTDTGWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 2 (lower is better)
Translates to: GSGMETLDQSRHIVCEEPWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCACAGCTTCCTATTCCTaGCAGACACGGGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVTASYS*QTRESP
Trigger: GGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGT...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp GATTCCTTCTCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACATTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: DSFSGIEACTANANRQGTLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...TGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTTTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: HSFLFLTDTGEPQHPRSFLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...AAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMNSSNC*PGGCLL
Trigger: CAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTT...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GATTCCTTCTCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACAAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: DSFSGIEACTANANRQGTRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...TGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp ACTGAGGATTCCTTCTCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: TEDSFSGIEACTANANRQRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...CTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGATTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGLEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCGGGAACATTGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: DVLKQLTKLADSGNAGNIDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...AATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGAAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 2 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CAA 90 bp GAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCGGGAACATTaGGTGGGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGC +
Preference number: 2 (lower is better)
Translates to: ETADKACRQRKCREH*VGPSALATSDSPLC
Trigger: GCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR CAA 90 bp CTTCAGATAGTTTGGCTTCACATCTTGGGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAA +
Preference number: 2 (lower is better)
Translates to: LQIVWLHILGSGMET*DQSRHIVCEEPLAE
Trigger: TTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAACTATCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR TCA 90 bp CAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTCAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: QDCERPDANKLKLGAGVCQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...ACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp CAGGTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTCTCACTCAGCCTCTGTaGTGGCCGTGTAAGCCACAA +
Preference number: 2 (lower is better)
Translates to: QVCATTARQDEFQFWFCFLTQPL*WPCKPQ
Trigger: TTGTGGCTTACACGGCCATCACAGAGGCTGAGTGAG...AAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp ACTGGTCAGGGAAGCTGTTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGACAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 2 (lower is better)
Translates to: TGQGSCFQVERKCCHLRRQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...TCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTTCCCTGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GCCCCGAGGATCCTCCCAAGAGATATAGTGTTCAACAGGATAACTAAGGATGACAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCT +
Preference number: 2 (lower is better)
Translates to: APRILPRDIVFNRITKDDRRTCS*LQQLSA
Trigger: AGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCT...GTCATCCTTAGTTATCCTGTTGAACACTATATCTCTTGGGAGGATCCTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR GCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GACAGATGCCAACGCAGCCAAGACCTCATCCTCCAACAGTACTTTTCTCAGAACCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: DRCQRSQDLILQQYFSQNQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...GTTCTGAGAAAAGTACTGTTGGAGGATGAGGTCTTGGCTGCGTTGGCATCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp CACAGGCTTGGGCAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 2 (lower is better)
Translates to: HRLGQPVEYVRQTLQIVWSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...CCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCCTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 2 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp CAGAGGAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTATTTGTACTGCATCCATaGGAAGGCAGACCAGTAGTC +
Preference number: 2 (lower is better)
Translates to: QRSHPGTAGTGQGSCFQVFVLHP*EGRPVV
Trigger: GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAA...TACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CAA 90 bp TATATTTGGAGATCAGCTTTCACCTTGGGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAA +
Preference number: 2 (lower is better)
Translates to: YIWRSAFTLGSGMET*DQSRHIVCEEPLAE
Trigger: TTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CAA 90 bp GTCACCACATTCCCACCTCTACTGTGCTTGCAATCTCTTAAAAGATaGTGGCTGGTAATGGCAGCCCACGCCTGGAATCCCAGCACTTCA +
Preference number: 2 (lower is better)
Translates to: VTTFPPLLCLQSLKR*WLVMAAHAWNPSTS
Trigger: TGAAGTGCTGGGATTCCAGGCGTGGGCTGCCATTACCAGCCACAATCTTTTAAGAGATTGCAAGCACAGTAGAGGTGGGAATGTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR TCA 90 bp ATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGTGGAAATGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 2 (lower is better)
Translates to: IEACTANANRQGTAVLWKCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...TTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp TCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGGGTCTGTTAGAGCCATaGACACCAATGAGCATAGCT +
Preference number: 2 (lower is better)
Translates to: SGIEACTANANRQGTAVLGLLEP*TPMSIA
Trigger: AGCTATGCTCATTGGTGTTCATGGCTCTAACAGACC...CAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp ACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCGGAGCAAGTGTCTGCTaGAGGCTCCAGGATACAGAG +
Preference number: 2 (lower is better)
Translates to: TMLGCVETADKACRQRKCGASVC*RLQDTE
Trigger: CTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCC...GCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPASKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGA...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp AGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: RNHSPLADTASFRTSLFLNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...CAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCACAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp ACTGAGGATTCCTTCTCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGAGACAGCTTAGCCTGTaGACTAAGCCCAGAGGTCAT +
Preference number: 2 (lower is better)
Translates to: TEDSFSGIEACTANANRQRQLSL*TKPRGH
Trigger: ATGACCTCTGGGCTTAGTTCACAGGCTAAGCTGTCT...CTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp GGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCGGGAACATTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GCVETADKACRQRKCREHLEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...ATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp CAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCCGCTCACTAGCAGTCTaGAAAACCTGTCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QCWDVLKQLTKLADSGNARSLAV*KTCQEG
Trigger: CCCTTCCTGACAGGTTTTCCAGACTGCTAGTGAGCG...GGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp ACGCAGCCAAGACCTCATCCTCCAACAGTACTTTTCTCAGAACTGAGGATTCCTAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: TQPRPHPPTVLFSELRIPRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...AGGAATCCTCAGTTCTGAGAAAAGTACTGTTGGAGGATGAGGTCTTGGCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp CTGGGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTAAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: LGSVRAMNTNEHSWSLKLRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...TAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GGTACTATAAGTGCTGCAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTTGCTGACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 2 (lower is better)
Translates to: GTISAAVQPSGDRAPGLLTNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...CAGCAAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTGCAGCACTTATAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTCCACTTCCTTTCTTATaGTGTATTTGGATGAAACAC +
Preference number: 2 (lower is better)
Translates to: WLGTQDCERPDANKLKLGPLPFL*CIWMKH
Trigger: GTGTTTCATCCAAATACACCATAAGAAAGGAAGTGG...ACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR CAA 90 bp ATGGCCAAGAGTAGAGGTCCATATATTTGGAGATCAGCTTTCACCTaGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTC +
Preference number: 2 (lower is better)
Translates to: MAKSRGPYIWRSAFT*GSGMETLDQSRHIV
Trigger: GACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATATGGACCTCTACTCTTGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp ACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCTGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 2 (lower is better)
Translates to: TMLGCVETADKACRQRKCCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...GCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp CTGGGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTATGGTGCCTGCAGTCTTaGAGGATGTTGCTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LGSVRAMNTNEHSWSLKLWCLQS*RMLLRK
Trigger: CTTCCTCAGCAACATCCTTCAAGACTGCAGGCACCA...TAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR TCA 90 bp ACTGAGGATTCCTTCTCTGGCATTGAAGCCTGCACAGCCAATGCAAACAGGCAGAGCATAGCTGGTCTTTaGAGCTACTCAGAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: TEDSFSGIEACTANANRQSIAGL*SYSEAF
Trigger: AAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCT...CTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTTGACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGG +
Preference number: 2 (lower is better)
Translates to: QPVEYVRQTLQIVWLHILTADKA*RQRKCR
Trigger: CCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGT...CAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR GCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGG +
Preference number: 2 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVSGIEA*TANANR
Trigger: CCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp GGTACTATAAGTGCTGCAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTTGCTGAGAGGTCCATATATTTaGAGATCAGCTTTCACCTTG +
Preference number: 2 (lower is better)
Translates to: GTISAAVQPSGDRAPGLLRGPYI*RSAFTL
Trigger: CAAGGTGAAAGCTGATCTCCAAATATATGGACCTCT...CAGCAAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTGCAGCACTTATAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp GGGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTCATCAGGGAAAAGTaGGATTTAGTACAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: GSGMETLDQSRHIVCEEPLIREK*DLVQLC
Trigger: ACAGAGCTGTACTAAATCCCACTTTTCCCTGATGAG...CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGACAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR TCA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCCAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCATCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPSIVST*RLDCQE
Trigger: CTCCTGACAATCTAACCTGCAAGTACTAACTATTGA...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp TTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGAGGGGCACGATGCATGTGTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: FSGRKEVLPSKKRGTMHVWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...CACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp ACTGGTCAGGGAAGCTGTTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGACAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: TGQGSCFQVERKCCHLRRQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...TCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTTCCCTGACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CCA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGAGTAGTCTTGCCTTGTaGGATGGCTCAATAGTTAGT +
Preference number: 2 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKSSLAL*DGSIVS
Trigger: ACTAACTATTGAGCCATCCCACAAGGCAAGACTACT...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 2 (lower is better)
Translates to: PSRNHSPLADTASFRTSLTNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp AAGTGGTCTGTCCACAGAAGCAGAGACTGCTTAGTGCCACCGGAGTCTGCCATTACACATGGAGAACAATaGAAGAACATGCTATCAGGC +
Preference number: 2 (lower is better)
Translates to: KWSVHRSRDCLVPPESAITHGEQ*KNMLSG
Trigger: GCCTGATAGCATGTTCTTCCATTGTTCTCCATGTGT...AATGGCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: GGPAFVLHPWEGRPVVLPSIVST*RLDCQE
Trigger: CTCCTGACAATCTAACCTGCAAGTACTAACTATTGA...AGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp GCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTTGGGGAGCAAGTGTTCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: ATSDSPLCSSSASLGSKCSIVST*RLDCQE
Trigger: CTCCTGACAATCTAACCTGCAAGTACTAACTATTGA...ACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp AGGAACCCATTTTCTAAACTGCAGATTACTAGGCCTGGCATGATTACGTACATCGTACAGGTGACCTACTaGCAGCTCCAAGTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: RNPFSKLQITRPGMITYIVQVTY*QLQVLS
Trigger: GCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC...GATGTACGTAATCATGCCAGGCCTAGTAATCTGCAGTTTAGAAAATGGGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp ATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGTGGAAAGTAGAAAGGAAGTGTTaGCATCTAAGAAGAGGGGCA +
Preference number: 2 (lower is better)
Translates to: IEACTANANRQGTAVLWKVERKC*HLRRGA
Trigger: TGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTAC...TTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp TCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACTCAAGCTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 2 (lower is better)
Translates to: SRPIFCHLKTRCSVEKLKLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...CTTGAGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp ACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGAGGCCTTTCATCTCTGTCTCACATAGATGGTGCCTaGAGTCTAGAGAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: TNEHSWSLKLLRGLSSLSHIDGA*SLERQQ
Trigger: TTGCTGCCTCTCTAGACTGCAGGCACCATCTATGTG...AGACAGAGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
3UTR-3UTR CCA 90 bp GCTTGGCACTTAAAATCTCCGAATCCACTTTCTCAATTAGCAGAGGCAGTAAGAGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: AWHLKSPNPLSQLAEAVRGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...TCTTACTGCCTCTGCTAATTGAGAAAGTGGATTCGGAGATTTTAAGTGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CAA 90 bp AGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAG +
Preference number: 2 (lower is better)
Translates to: SICTASMGRQTSSLA*WDGSIVSTCRLDCQ
Trigger: CTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR TCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCACAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp GTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGTTTTGATGTATGCTTGCTaGAGGGAAAATGGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: VCATTARQDEFQFWFCFVLMYAC*RENGKD
Trigger: GTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAA...AACAAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCAGTAGTCTTGCCTTGTaGGATGGCTCAATAGTTAGT +
Preference number: 2 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVSSLAL*DGSIVS
Trigger: ACTAACTATTGAGCCATCCCACAAGGCAAGACTACT...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATAGTAGTCTTGCCTTGTaGGATGGCTCAATAGTTAGT +
Preference number: 2 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHSSLAL*DGSIVS
Trigger: ACTAACTATTGAGCCATCCCACAAGGCAAGACTACT...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp ACGTACATCTGTAATCCCATCAGTTGGAAGGCACAGGCAGAGGATCAGGAGTTTTCTCTTAAAAGATTGTaGCTGGTAATGGCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: TYICNPISWKAQAEDQEFSLKRL*LVMAAH
Trigger: GTGGGCTGCCATTACCAGCCACAATCTTTTAAGAGA...AAACTCCTGATCCTCTGCCTGTGCCTTCCAACTGATGGGATTACAGATGTACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp GTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGTTCTTTGTAGACCAGGCTaGCCTCAAATTCAGAAATCC +
Preference number: 2 (lower is better)
Translates to: VCATTARQDEFQFWFCFVLCRPG*PQIQKS
Trigger: GGATTTCTGAATTTGAGGCCAGCCTGGTCTACAAAG...AACAAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 90 bp CCATACACAGCACAGCAAGCATTCAGAGTTTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAATCCACTTTCTCAATTAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PYTAQQAFRVCRESS*ALKISESTFSISRG
Trigger: GCCTCTGCTAATTGAGAAAGTGGATTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGCTGTGCTGTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR GCA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR GCA 90 bp AGGAACCCATTTTCTAAACTGCAGATTACTAGGCCTGGCATGATTACGTACATCTTCTCTGTGCCTCGGTaGTGTACTGAAGAACTGGGA +
Preference number: 2 (lower is better)
Translates to: RNPFSKLQITRPGMITYIFSVPR*CTEELG
Trigger: TCCCAGTTCTTCAGTACAGCACCGAGGCACAGAGAA...GATGTACGTAATCATGCCAGGCCTAGTAATCTGCAGTTTAGAAAATGGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp CTGGGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTATGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: LGSVRAMNTNEHSWSLKLCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...TAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp TCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGATCCCCATCCATCACCTaGATGAAGCCAAATGTGAAG +
Preference number: 2 (lower is better)
Translates to: SVRAMNTNEHSWSLKLLRSPSIT*MKPNVK
Trigger: CTTCACATTTGGCTTCATCCAGGTGATGGATGGGGA...TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CCA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGGGAGACAGCTCAGAGTaGAAAGCTGGACCACAGAGT +
Preference number: 2 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRGDSSE*KAGPQS
Trigger: ACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCC...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CCA 90 bp ATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAACCACAATATAGCATCTaGGTCCTAAATTACTGTAGA +
Preference number: 2 (lower is better)
Translates to: METLDQSRHIVCEEPLAEPQYSI*VLNYCR
Trigger: TCTACAGTAATTTAGGACCCAGATGCTATATTGTGG...TTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CAA 90 bp CTGTGGTTTAAAAGGTATGTCTTCTCAAGACAACTAGAGAAGAGCTaGTGGTTAGGCACTGTATGTGGAGTTCAAGCCAACTGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: LWFKRYVFSRQLEKS*WLGTVCGVQANCER
Trigger: TCTCTCACAGTTGGCTTGAACTCCACATACAGTGCCTAACCACAAGCTCTTCTCTAGTTGTCTTGAGAAGACATACCTTTTAAACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTATCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVSIVST*RLDCQE
Trigger: CTCCTGACAATCTAACCTGCAAGTACTAACTATTGA...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CCA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRTLQIV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGT...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CAA 90 bp ACACCATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTaGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGCCTATTG +
Preference number: 2 (lower is better)
Translates to: TPSLSFTLGKDPSGM*KLWLLNGTKTVSLL
Trigger: CAATAGGCTTACTGTCTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTGAAAGAAAGAGATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGTCAATAGTTAGTACTTaGAGGTTAGATTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQSIVST*RLDCQE
Trigger: CTCCTGACAATCTAACCTGCAAGTACTAACTATTGA...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 90 bp TTCCACCTACAGAAAACCTGGCCATGTAATGGACCCAGAAGACACTaGAACTCTAAGAAATACTCAATAGAAAGCAACATCAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: FHLQKTWPCNGPRRH*NSKKYSIESNIRVQ
Trigger: CTGAACTCTGATGTTGCTTTCTATTGAGTATTTCTTAGAGTTCAAGTGTCTTCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CAA 90 bp AATCCCTGGAACCCATTTGGTACAACTAACTTGGTTAGCTGTTCTTaGACCTCCAGGTATACATATCTTTGTGCATGTACACACATACCA +
Preference number: 2 (lower is better)
Translates to: NPWNPFGTTNLVSCS*TSRYTYLCACTHIP
Trigger: TGGTATGTGTGTACATGCACAAAGATATGTATACCTGGAGGTCAAAGAACAGCTAACCAAGTTAGTTGTACCAAATGGGTTCCAGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CAA 90 bp GATACAGTTCTGACAGAATCAGATAGAGATGAGAACTCTGTCTTTTaGTTTGATGTATGCTTGCTGCAGGGAAAATGGGAAGGACAACCA +
Preference number: 2 (lower is better)
Translates to: DTVLTESDRDENSVF*FDVCLLQGKWEGQP
Trigger: TGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATCTGATTCTGTCAGAACTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR GCA 90 bp ATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGAGGCCTTTCATCTCTTGATGAGTGTTACTaGTACTTACCTTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: MNTNEHSWSLKLLRGLSSLDECY*YLPLFA
Trigger: AGCAAACAAAGGTAAGTAGCAGTAACACTCATCAAG...AGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR CCA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CCA 72 bp GAGGCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTaGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: EARPASTVPTAS*RNSSNCCPGGC
Trigger: GCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR GCA 72 bp GCTGGTGAGGTGCTCACAGGCCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTTAGCGCTAGGCCATAC +
Preference number: 3 (lower is better)
Translates to: AGEVLTGPGRRT*SCLQQLSARPY
Trigger: GTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCATTGTCCGACGCTGGTaGCTCTGGCTGTGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: ARPASTVPTASWRNSSNCIVRRW*LWLCLW
Trigger: CCACAAGCACAGCCAGAGCAACCAGCGTCGGACAAT...GCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 72 bp GGAACTGTTCCAGCAGCAAGGGAAGCACGTTGCTGGTaGGGTGCTCACAGGCCCGGGCAGACGCACCTGCAG +
Preference number: 3 (lower is better)
Translates to: GTVPAAREARCW*GAHRPGQTHLQ
Trigger: CTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCTGCTGGAACAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCGGCTCTTTAAGAGTTTaGCACAGCCATGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: ARPASTVPTASWRNSSNCGSLRV*HSHAGG
Trigger: GCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC...GCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 72 bp CAGCAGACAGGAGACCTGGCTGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: QQTGDLAGHPRL*ASGCQQAEAGC
Trigger: GCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR TCA 72 bp AGAGCCTTGGTTACCCAGAGCAGCAGTGTGAAAGCCTaGTCACGGGAGGATTCAGAGGCCAGGCCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: RALVTQSSSVKA*SREDSEARPAS
Trigger: GGAGGCGGGCCTGGCCTCTGAATCCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGGTAACCAAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 72 bp GAGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCTAGGCCATACAAGTTT +
Preference number: 3 (lower is better)
Translates to: EVLTGPGRRTCS*LQQLSARPYKF
Trigger: AAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 72 bp GAATGGGATGAGCTGGGACCCTCCTCCCTGGGTGACTaGTCACTCAGCCTCTGTGATGGCCGTGTAAGCCAC +
Preference number: 3 (lower is better)
Translates to: EWDELGPSSLGD*SLSLCDGRVSH
Trigger: GTGGCTTACACGGCCATCACAGAGGCTGAGTGAGCAGTCACCCAGGGAGGAGGGTCCCAGCTCATCCCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp TGCTCACAGGCCCGGGCAGACGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGCCATACAAGTTTCATG +
Preference number: 3 (lower is better)
Translates to: CSQARADAPAAA*NSLALGHTSFM
Trigger: CATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 72 bp AGCTGGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCAAAGCACTTAGTGGCG +
Preference number: 3 (lower is better)
Translates to: SWRNSSNCCPGG*LLRSPAKHLVA
Trigger: CGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CCA 72 bp AGGGTTCCTGATGCCTCCAGTGCGGCCACCCAACTCTaGGAATCTTCCTCCAGGAAGGTCAGTCGGTACAGG +
Preference number: 3 (lower is better)
Translates to: RVPDASSAATQL*ESSSRKVSRYR
Trigger: CCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGTTGGGTGGCCGCACTGGAGGCATCAGGAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR CCA 72 bp CCCATGAGCCGGGTGGTCAGGCAGGCACTGAGAGGATaGTATCTGAGGACTAGAGCCTTGGTTACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: PMSRVVRQALRG*YLRTRALVTQS
Trigger: GCTCTGGGTAACCAAGGCTCTAGTCCTCAGATACCATCCTCTCAGTGCCTGCCTGACCACCCGGCTCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp CAGAGAGAAGCCATCAGCTGCTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCATGAGCCGGGTGGTCAG +
Preference number: 3 (lower is better)
Translates to: QREAISCCTAKF*ITEEAHEPGGQ
Trigger: CTGACCACCCGGCTCATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp AGAGCGGGGCCGTGCAACAGAACCGTGATGGGGAGGTaGTCCACACCCAGGAGAGAGACTGTAATTGAGCTG +
Preference number: 3 (lower is better)
Translates to: RAGPCNRTVMGR*STPRRETVIEL
Trigger: CAGCTCAATTACAGTCTCTCTCCTGGGTGTGGACCACCTCCCCATCACGGTTCTGTTGCACGGCCCCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp GCCAGGCCCGCCTCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 3 (lower is better)
Translates to: ARPASTVPTASWRNSSNCCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...GCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp TGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTTTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: WLGTQDCERPDANKLKLGLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...ACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp AGACACGCAGTCAGGGAGTGGAGAGCTGCCAGGCCCTCTGCCTCTACTCGCTCAGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 3 (lower is better)
Translates to: RHAVREWRAARPSASTRSASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...TGAGCGAGTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR TCA 72 bp TGTGGGTGTGCACGGTCTCTGAATCAGCTACGAGGGTaGGCCAGGAAGCCCCGAGGATCCTCCCAAGAGATA +
Preference number: 3 (lower is better)
Translates to: CGCARSLNQLRG*ARKPRGSSQEI
Trigger: TATCTCTTGGGAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTAGCTGATTCAGAGACCGTGCACACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR GCA 72 bp TTCCTCCAGGAAGGTCAGTCGGTACAGGTGACCTACTaGCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGG +
Preference number: 3 (lower is better)
Translates to: FLQEGQSVQVTY*QLQVLSRQETW
Trigger: CCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGACCTTCCTGGAGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 72 bp GGCAGTAGCACAGAAGTGGGGAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCAATCCGGACAGCCATT +
Preference number: 3 (lower is better)
Translates to: GSSTEVGRRVRA*IHCRAAIRTAI
Trigger: AATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCTACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR CCA 72 bp GCCAGGCCCTCTGCCTCTACTCGCTCACTAGCAGTCTaGAAAACCTGTCAGGAAGGGATCCCATGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: ARPSASTRSLAV*KTCQEGIPWLS
Trigger: AGAGAGCCATGGGATCCCTTCCTGACAGGTTTTCCAGACTGCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CCA 72 bp GTTCCTGATGCCTCCAGTGCGGCCACCCTACAACTCTaGGAATCTTCCTCCAGGAAGGTCAGTCGGTACAGG +
Preference number: 3 (lower is better)
Translates to: VPDASSAATLQL*ESSSRKVSRYR
Trigger: CCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp CAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTTGCTaGCTAGCTGATCTTGCCAAAGCAGCACGTTTGAGG +
Preference number: 3 (lower is better)
Translates to: QCSRVETEHLAC*LADLAKAARLR
Trigger: CCTCAAACGTGCTGCTTTGGCAAGATCAGCTAGCCAGCAAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp GGTACTATAAGTGCTGCAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTTGCTGTTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: GTISAAVQPSGDRAPGLLLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...CAGCAAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTGCAGCACTTATAGTACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp GCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 3 (lower is better)
Translates to: AWKPWTKAGTLSVKNRWRLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...CCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp ACTCTGGGAATCTTCCTCCAGGAAGGTCAGTCGGTACAGGTGACCTACTGCCAGTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 3 (lower is better)
Translates to: TLGIFLQEGQSVQVTYCQLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...CTGGCAGTAGGTCACCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 72 bp CCAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTaGCTCCTGAGGGCTGGGATTAAAGGTGTGCACCAC +
Preference number: 3 (lower is better)
Translates to: PGWPQIQKSTCL*LLRAGIKGVHH
Trigger: GTGGTGCACACCTTTAATCCCAGCCCTCAGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp GACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACAGGCTCTTTAAGAGTTTaGCACAGCCATGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: DPSAAQLPIPDRHGRAPTGSLRV*HSHAGG
Trigger: GCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC...TGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp GAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTAGAAAGAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 3 (lower is better)
Translates to: EPSWNGWNWSGKLFSGRKSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...CTTTCTACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp TCCTTCTACATGTGGCTCGGGGCTTTGGTGGCTTGGATGAGATGTCTGTCTCTGAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 3 (lower is better)
Translates to: SFYMWLGALVAWMRCLSLSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...CAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp CATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGATTCCTTCTCTGGCATaGAAGCCTGCACAGCCAATG +
Preference number: 3 (lower is better)
Translates to: HINKKERRRLQAKGRVSGIPSLA*KPAQPM
Trigger: CATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAAT...CCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGG +
Preference number: 3 (lower is better)
Translates to: STEVGRRVRACIHCRAAITKAGT*SVKNRW
Trigger: CCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGT...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 72 bp AAGTGTTGCCATCTAAGAAGAGGGGCACGATGCATGTaGCGCTCTGGGCAGCTAGTTCAGGGCTCAGATGGG +
Preference number: 3 (lower is better)
Translates to: KCCHLRRGARCM*RSGQLVQGSDG
Trigger: CCCATCTGAGCCCTGAACTAGCTGCCCAGAGCGTCACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 72 bp AGAGATTTTCCCCCATCATTCCTCACAGGCATTGGCTaGCCCGGGTGCTGTTACCTTCTAGTCACCTGCCCC +
Preference number: 3 (lower is better)
Translates to: RDFPPSFLTGIG*PGCCYLLVTCP
Trigger: GGGGCAGGTGACTAGAAGGTAACAGCACCCGGGTCAGCCAATGCCTGTGAGGAATGATGGGGGAAAATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp AGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGGATCACTGAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: SAVRHEQREAIS*CTAKFWITEEA
Trigger: GGCCTCCTCAGTGATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp AGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATaGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATG +
Preference number: 3 (lower is better)
Translates to: SHAGGPAFVLHP*EGRPVVLPCGM
Trigger: CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp AAGAACCGCTGGCGGAACATGATCCGAACATCAGCATaGCCGGCACGAGTCAACACATCAGTGCAGTCAGAC +
Preference number: 3 (lower is better)
Translates to: KNRWRNMIRTSA*PARVNTSVQSD
Trigger: GTCTGACTGCACTGATGTGTTGACTCGTGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp TGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTaGCGGAACATGATCCGAACATCAGCATGGCCGGCA +
Preference number: 3 (lower is better)
Translates to: WTKAGTLSVKNR*RNMIRTSAWPA
Trigger: TGCCGGCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp ACAACAGGGAAAGCGGCCTGTCCACAGCAGGGAAAGTaGTCTGTCCACAGAAGCAGAGACTGCTTAGTGCCA +
Preference number: 3 (lower is better)
Translates to: TTGKAACPQQGK*SVHRSRDCLVP
Trigger: TGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTTTCCCTGCTGTGGACAGGCCGCTTTCCCTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp CGGTCCACCTGTAGCAGGGACTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACAGAGACAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: RSTCSRDCTCTS*KMALSTETARP
Trigger: GGGTCTGGCTGTCTCTGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACAGTCCCTGCTACAGGTGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164776.8
3UTR-3UTR CAA 90 bp GCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTT +
Preference number: 3 (lower is better)
Translates to: ALTLQQHSFLFLTDTGEPTSSLA*WDGSIV
Trigger: AACTATTGAGCCATCCCACAAGGCAAGACTACTGGT...GGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp TGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 3 (lower is better)
Translates to: WLGTQDCERPDANKLKLGCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...ACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTTGGGGAGCGGCATGGAAATTGTCCGACGCTGGTaGCTCTGGCTGTGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: VRQTLQIVWLHILGSGMEIVRRW*LWLCLW
Trigger: CCACAAGCACAGCCAGAGCAACCAGCGTCGGACAAT...TTCCATGCCGCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CAA 90 bp ACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCGCTACTTACCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 3 (lower is better)
Translates to: TQDCERPDANKLKLGAGVATYLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGTAAGTAGC...GACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR TCA 72 bp GGAACATTTGGTGGGACCATCTGCTCTAGCCACATCTaGCTCCCCTTTATGCAGCTCCTCAGCAAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: GTFGGTICSSHI*LPFMQLLSKLG
Trigger: CCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCACCAAATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR TCA 72 bp CTCTGCTTCAAAAGCTCCCGCATGAGTCGGTTCAGCTaGGGGATTTCCACATTTCGTGGCAGGGAGCAGACA +
Preference number: 3 (lower is better)
Translates to: LCFKSSRMSRFS*GISTFRGREQT
Trigger: TGTCTGCTCCCTGCCACGAAATGTGGAAATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR TCA 72 bp AGCTGTGGCCACAGCTCTGCTTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGATTTCCACATTTCGTG +
Preference number: 3 (lower is better)
Translates to: SCGHSSASKAPA*VGSAEGFPHFV
Trigger: CACGAAATGTGGAAATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR TCA 72 bp ATTTGTATGGCAGTAGCACAGAAGTGGGGAGGCGAGTaGGAGCGTGCATACACTGCAGAGCAGCAATCCGGA +
Preference number: 3 (lower is better)
Translates to: ICMAVAQKWGGE*ERAYTAEQQSG
Trigger: TCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCTACTGCCATACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR TCA 72 bp TTGTCGTCCAGAGGCTTGGCTAAGGCTCGGATGACCTaGGATTTGTATGGCAGTAGCACAGAAGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LSSRGLAKARMT*DLYGSSTEVGR
Trigger: CCTCCCCACTTCTGTGCTACTGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR TCA 72 bp CTTCCACGAAAGGTCCCAGACTGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGAAAGCCAGCAGGAGAT +
Preference number: 3 (lower is better)
Translates to: LPRKVPDCSPWR*GHGRCGKPAGD
Trigger: ATCTCCTGCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAAGGACTACAGTCTGGGACCTTTCGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR TCA 72 bp AGCTGTGGCCACAGCTCTGCTTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGATTTCCACCTACAGAA +
Preference number: 3 (lower is better)
Translates to: SCGHSSASKAPA*VGSAEGFPPTE
Trigger: TTCTGTAGGTGGAAATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 72 bp CATCAGTTGGAAGGCACAGGCAGAGGATCAGGAGTTTaGTGGCTTTGCCTCTCCTCACCCTATGTCCACCCT +
Preference number: 3 (lower is better)
Translates to: HQLEGTGRGSGV*WLCLSSPYVHP
Trigger: AGGGTGGACATAGGGTGAGGAGAGGCAAAGCCATCAAACTCCTGATCCTCTGCCTGTGCCTTCCAACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp GTAACACCAACCCCAGTTCTCGAGGTCACACTCCACTaGACTGACCCTTCAGCAGCACAGCTTCCTATTCCT +
Preference number: 3 (lower is better)
Translates to: VTPTPVLEVTLH*TDPSAAQLPIP
Trigger: AGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAGAACTGGGGTTGGTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp AGGAGATTACGGGGATCCTTCTCCCCATCCATCACCTaGATGAAGCCAAATGTGAAGTCAGCTCCCAGACCC +
Preference number: 3 (lower is better)
Translates to: RRLRGSFSPSIT*MKPNVKSAPRP
Trigger: GGGTCTGGGAGCTGACTTCACATTTGGCTTCATCCAGGTGATGGATGGGGAGAAGGATCCCCGTAATCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CCA 72 bp AGTAGTAGGGGTTGGAGACAGCTCAGAGTGGAAAGCTaGACCACAGAGTCAGGGCAGGATAATGCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: SSRGWRQLRVES*TTESGQDNASS
Trigger: GCTGGAAGCATTATCCTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCCAACCCCTACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp GATCAGCTTTCACCTTGGGGAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTGTCTGTGAAGAACCGC +
Preference number: 3 (lower is better)
Translates to: DQLSPWGAAWKP*TKAGTLSVKNR
Trigger: GCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp TGGGTGCTGGGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGTTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: WVLGSVRAMNTNEHSWSLLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...CAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: AWKPWTKAGTLSVKNRWRGSFQG*SDAGCS
Trigger: AGAGCAACCAGCGTCGGACAATCCTTGAAATGATCC...CCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp CGCACCTGCAGCTGCCTGCAACAGCTTAGCGCTAGGCCATACAAGTTTCATGTCGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: RTCSCLQQLSARPYKFHVGSFQG*SDAGCS
Trigger: AGAGCAACCAGCGTCGGACAATCCTTGAAATGATCC...GACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GTGGGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: VGPSALATSDSPLCSSSAEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...TGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GTGGGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 3 (lower is better)
Translates to: VGPSALATSDSPLCSSSARGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...TGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp CACAGGCTTGGGCAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATT +
Preference number: 3 (lower is better)
Translates to: HRLGQPVEYVRQTLQIVWSGMET*DQSRHI
Trigger: AATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCT...CCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp TATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGGACAACTAGAGAAGAGCTaGTGGTTAGGCACTGTATGT +
Preference number: 3 (lower is better)
Translates to: YQQEGEAPVTGQGQGEWGQLEKS*WLGTVC
Trigger: ACATACAGTGCCTAACCACAAGCTCTTCTCTAGTTG...TCCCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 72 bp CACATAGATGGTGCCTGCAGTCTTGAAGGATGTTGCTaGGGAAGGAACCAAGGAGGTCCTCAGCATCAGCTC +
Preference number: 3 (lower is better)
Translates to: HIDGACSLEGCC*GRNQGGPQHQL
Trigger: GAGCTGATGCTGAGGACCTCCTTGGTTCCTTCCTCAGCAACATCCTTCAAGACTGCAGGCACCATCTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR TCA 72 bp ATTAGAAGAATAGCTTTTGTGGGTGTGCACGGTCTCTaGATCAGCTACGAGGGTGAGCCAGGAAGCCCCGAG +
Preference number: 3 (lower is better)
Translates to: IRRIAFVGVHGL*ISYEGEPGSPE
Trigger: CTCGGGGCTTCCTGGCTCACCCTCGTAGCTGATTCAGAGACCGTGCACACCCACAAAAGCTATTCTTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR TCA 72 bp GCAGCTCTGGTAAAAGCACAGGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCTTCAGATAGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: AALVKAQAWAAC*VRETDPSDSLA
Trigger: AGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACCAGAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 72 bp TGTGTACATGTATGCACATCGTGTGCATCTGGTACCTaGGTCGGGAGAGGGCACTGGATGGATCCCTTAGGA +
Preference number: 3 (lower is better)
Translates to: CVHVCTSCASGT*VGRGHWMDPLG
Trigger: TCCTAAGGGATCCATCCAGTGCCCTCTCCCGACTCAGGTACCAGATGCACACGATGTGCATACATGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp GTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGACCATCTGCTCTAGCC +
Preference number: 3 (lower is better)
Translates to: VETADKACRQRK*REHLVGPSALA
Trigger: GGCTAGAGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR GCA 72 bp CTCAGAACTGAGGATTCCTTCTCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGGCAGGGTACAGCTGTC +
Preference number: 3 (lower is better)
Translates to: LRTEDSFSGIEA*TANANRQGTAV
Trigger: GACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAATCCTCAGTTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR GCA 72 bp CGAGTTTTAGTCCCATTGACCCATAGGTACTATAAGTaGTGCAGTGCAGCCGAGTGGAGACAGAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: RVLVPLTHRYYK*CSAAEWRQSTW
Trigger: CCAGGTGCTCTGTCTCCACTCGGCTGCACTGCAGCACTTATAGTACCTATGGGTCAATGGGACTAAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 72 bp CAGCAGGGAAAGTGGTCTGTCCACAGAAGCAGAGACTaGTTAGTGCCACCGGAGTCTGCCATTAGGTTTTAC +
Preference number: 3 (lower is better)
Translates to: QQGKWSVHRSRD*LVPPESAIRFY
Trigger: GTAAAACCTAATGGCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTTTCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp AAGACAGTATGGCGGTCCACCTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACAGAGACAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: KTVWRSTCTCTS*KMALSTETARP
Trigger: GGGTCTGGCTGTCTCTGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACAGGTGGACCGCCATACTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163398.8
3UTR CCA 72 bp TTTGGCTTCACATCTTGGGGAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTGTCTGTGAAGAACCGC +
Preference number: 3 (lower is better)
Translates to: FGFTSWGAAWKP*TKAGTLSVKNR
Trigger: GCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CAA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTT +
Preference number: 3 (lower is better)
Translates to: FAQPCRRPSICTASMGRQTSSLA*WDGSIV
Trigger: AACTATTGAGCCATCCCACAAGGCAAGACTACTGGT...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp GCATGGAAACCTTGGACCAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTT +
Preference number: 3 (lower is better)
Translates to: AWKPWTKAGTLSVKNRWRTSSLA*WDGSIV
Trigger: AACTATTGAGCCATCCCACAAGGCAAGACTACTGGT...CCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp ACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 3 (lower is better)
Translates to: TMLGCVETADKACRQRKCSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...GCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp CACAGGCTTGGGCAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: HRLGQPVEYVRQTLQIVWEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...CCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp TACGAGGGTGAGCCAGGAAGCCCCGAGGATCCTCCCAAGAGATATAGTGTTCAAGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: YEGEPGSPEDPPKRYSVQEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...TTGAACACTATATCTCTTGGGAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR CAA 90 bp GTGGGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCATGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 3 (lower is better)
Translates to: VGPSALATSDSPLCSSSACRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...TGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR TCA 72 bp TCCTGCTGGCATTTTTCTGCCACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCACTGGACTCTGTAACC +
Preference number: 3 (lower is better)
Translates to: SCWHFSATCWRL*QTATTSLDSVT
Trigger: GGTTACAGAGTCCAGTGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 72 bp TCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCAGTAGCACAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: SSCRPEAWLRLG*PEICMAVAQKW
Trigger: CCACTTCTGTGCTACTGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR GCA 72 bp CTTTTCTCAGAACTGAGGATTCCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGGCAGGGTACAGCTGTC +
Preference number: 3 (lower is better)
Translates to: LFSELRIPGIEA*TANANRQGTAV
Trigger: GACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGGAATCCTCAGTTCTGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR GCA 72 bp GGCTGGAGAGATGGTTCAGTGGTTAAGAGCATCGACTaGTCTTCCAGAGGTCCTGAGTTCAACTCCAAGCAA +
Preference number: 3 (lower is better)
Translates to: GWRDGSVVKSID*SSRGPEFNSKQ
Trigger: TTGCTTGGAGTTGAACTCAGGACCTCTGGAAGAGCAGTCGATGCTCTTAACCACTGAACCATCTCTCCAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 72 bp GTTTTAGTCCCATTGACCCATAGGTACTATAAGTGCTaGAGTGCAGCCGAGTGGAGACAGAGCACCTGGCTT +
Preference number: 3 (lower is better)
Translates to: VLVPLTHRYYKC*SAAEWRQSTWL
Trigger: AAGCCAGGTGCTCTGTCTCCACTCGGCTGCACTGCAGCACTTATAGTACCTATGGGTCAATGGGACTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 72 bp CGGTGCTGTACTGAAGAACTGGGAGCTCTCGGTGTGTaGTTCTCTAGCATCTGTAGAATAAGGCAGTACACG +
Preference number: 3 (lower is better)
Translates to: RCCTEELGALGV*FSSICRIRQYT
Trigger: CGTGTACTGCCTTATTCTACAGATGCTAGAGAAGCACACACCGAGAGCTCCCAGTTCTTCAGTACAGCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp AGTCAGATGAATCTGTGTCAGTCCTTCCTTCCTCTTTaGCCCATCGTCACCACATTCCCACCTCTACTGTGC +
Preference number: 3 (lower is better)
Translates to: SQMNLCQSFLPL*PIVTTFPPLLC
Trigger: GCACAGTAGAGGTGGGAATGTGGTGACGATGGGGCAAAGAGGAAGGAAGGACTGACACAGATTCATCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp CACTCCTTCTACATGTGGCTCGGGGCTTTGGTGGCTTaGATGAGATGTCTGTCTCTGGTAAGTCTGGCATTT +
Preference number: 3 (lower is better)
Translates to: HSFYMWLGALVA*MRCLSLVSLAF
Trigger: AAATGCCAGACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CCA 72 bp AAACTTACCCGGGTGGTCAGGCAGGCACTGAGAGGATaGTATCTGAGGACTAGAGCCTTGGTTACCTGTAAT +
Preference number: 3 (lower is better)
Translates to: KLTRVVRQALRG*YLRTRALVTCN
Trigger: ATTACAGGTAACCAAGGCTCTAGTCCTCAGATACCATCCTCTCAGTGCCTGCCTGACCACCCGGGTAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CCA 72 bp CCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGCGGCATGGAAACCTTG +
Preference number: 3 (lower is better)
Translates to: PVEYVRQTLQIV*LHILGSGMETL
Trigger: CAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CCA 72 bp GTAGAGGTCCATATATTTGGAGATCAGCTTTCACCTTaGGGAGCGGCATGGAAACCTTGGACCAAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: VEVHIFGDQLSP*GAAWKPWTKAG
Trigger: GCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATATGGACCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp CGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTGGCTCTTTAAGAGTTTaGCACAGCCATGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: RESPNIQGLFLKYKSQSLGSLRV*HSHAGG
Trigger: GCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC...AAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp ATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGAGGCCTTTCATCTAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 3 (lower is better)
Translates to: MNTNEHSWSLKLLRGLSSSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...AGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp AAGCTGTTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGAGGGGCACGATGTTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: KLFSGRKEVLPSKKRGTMLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...CATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCAAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 3 (lower is better)
Translates to: WLFKSFAQPCRRPSICTARGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR CCA 72 bp CCTGGCATGATTACGTACATCTGTAATCCCATCAGTTaGAAGGCACAGGCAGAGGATCAGGAGTTTGATGGC +
Preference number: 3 (lower is better)
Translates to: PGMITYICNPIS*KAQAEDQEFDG
Trigger: GCCATCAAACTCCTGATCCTCTGCCTGTGCCTTCCAACTGATGGGATTACAGATGTACGTAATCATGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp GATCGCATGAAGTTAGTGATGATGCTGAAGACAGTATaGCGGTCCACCTGTAGCAGGGACTGTACATGTACC +
Preference number: 3 (lower is better)
Translates to: DRMKLVMMLKTV*RSTCSRDCTCT
Trigger: GGTACATGTACAGTCCCTGCTACAGGTGGACCGCCATACTGTCTTCAGCATCATCACTAACTTCATGCGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164776.8
3UTR-3UTR CAA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGGCTCTTTAAGAGTTTaGCACAGCCATGCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQGSLRV*HSHAGG
Trigger: GCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp CAAAGCAGGCACATTGTCTGTGAAGAACCGCTGGCGGAACATGATCCGAACATCCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 3 (lower is better)
Translates to: QSRHIVCEEPLAEHDPNIQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...GATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
3UTR TCA 72 bp GTGCCCATTACAAAGAAGGCTTTATTCTCTGGCAGGTaGACTCATGTAACACCAACCCCAGTTCTCGAGGTC +
Preference number: 3 (lower is better)
Translates to: VPITKKALFSGR*THVTPTPVLEV
Trigger: GACCTCGAGAACTGGGGTTGGTGTTACATGAGTTCACCTGCCAGAGAATAAAGCCTTCTTTGTAATGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp GAGACTGTAATTGAGCTGAAGCTAAAGCTAGTGCTGTaGATTAAACTCCCACAACAGGGAAAGCGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: ETVIELKLKLVL*IKLPQQGKRPV
Trigger: GACAGGCCGCTTTCCCTGTTGTGGGAGTTTAATGCACAGCACTAGCTTTAGCTTCAGCTCAATTACAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTaGGATGGCTCAATAGTTAGTACTTGCAGGTTAGAT +
Preference number: 3 (lower is better)
Translates to: ASMGRQTSSLAL*DGSIVSTCRLD
Trigger: ATCTAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp GGGTCTGTTAGAGCCATGAACACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGAGGCCTTTCATCTCTG +
Preference number: 3 (lower is better)
Translates to: GSVRAMNTNEHS*SLKLLRGLSSL
Trigger: CAGAGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR CCA 72 bp TCGGTTCAGCTGAGGGATTTCCACCTACAGAAAACCTaGCCATGTAATGGACCCAGAAGACACTTGAACTCT +
Preference number: 3 (lower is better)
Translates to: SVQLRDFHLQKT*PCNGPRRHLNS
Trigger: AGAGTTCAAGTGTCTTCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTGGAAATCCCTCAGCTGAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 72 bp AGAACAATGGAAGAACATGCTATCAGGCCATCAAACTaGATCAGCAGGTCAGTGGGTAAAGGCACCTGCTGT +
Preference number: 3 (lower is better)
Translates to: RTMEEHAIRPSN*ISRSVGKGTCC
Trigger: ACAGCAGGTGCCTTTACCCACTGACCTGCTGATCCAGTTTGATGGCCTGATAGCATGTTCTTCCATTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp CAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTTGACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTT +
Preference number: 3 (lower is better)
Translates to: QPVEYVRQTLQIVWLHILTSSLA*WDGSIV
Trigger: AACTATTGAGCCATCCCACAAGGCAAGACTACTGGT...CAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR-3UTR CAA 90 bp CGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTT +
Preference number: 3 (lower is better)
Translates to: RESPNIQGLFLKYKSQSLTSSLA*WDGSIV
Trigger: AACTATTGAGCCATCCCACAAGGCAAGACTACTGGT...AAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp ATTGAAGCCTGCACAGCCAATGCAAACAGGCAGGGTACAGCTGTCTTGTGGAAACAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 3 (lower is better)
Translates to: IEACTANANRQGTAVLWKQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...TTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR-3UTR CAA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 3 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp CACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTGGACCCAGAAGACACTaGAACTCTAAGAAATACTCA +
Preference number: 3 (lower is better)
Translates to: HSFLFLTDTGEPQHPRSFGPRRH*NSKKYS
Trigger: TGAGTATTTCTTAGAGTTCAAGTGTCTTCTGGGTCC...AAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp ACGTACATCTGTAATCCCATCAGTTGGAAGGCACAGGCAGAGGATCAGGAGTTTCCATATTCCCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 3 (lower is better)
Translates to: TYICNPISWKAQAEDQEFPYSLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGG...AAACTCCTGATCCTCTGCCTGTGCCTTCCAACTGATGGGATTACAGATGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 72 bp ATTTGTAAAAAGATATGTAGCTTCTCTGTGCCTCGGTaGTGTACTGAAGAACTGGGAGCTCTCGGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: ICKKICSFSVPR*CTEELGALGVC
Trigger: GCACACACCGAGAGCTCCCAGTTCTTCAGTACAGCACCGAGGCACAGAGAAGCTACATATCTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp TGGATGGATCCCTTAGGACTGGAGATGGTTACAACTTaGCATATGGGCATTAGGAATCAAAACTGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: WMDPLGLEMVTT*HMGIRNQNWVL
Trigger: GAGGACCCAGTTTTGATTCCTAATGCCCATATGGCAAGTTGTAACCATCTCCAGTCCTAAGGGATCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp CGTGAGTGTGCCCATTACAAAGAAGGCTTTATTCTCTaGCAGGTGAACTCATGTAACACCAACCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: RECAHYKEGFIL*QVNSCNTNPSS
Trigger: AGAACTGGGGTTGGTGTTACATGAGTTCACCTGCCAGAGAATAAAGCCTTCTTTGTAATGGGCACACTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR-3UTR CAA 90 bp TCACTAGATATTGGTTTTAAAGAGCTTACCATGTCACTGCTACGTACAACTACAATTGTCCGACGCTGGTaGCTCTGGCTGTGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SLDIGFKELTMSLLRTTTIVRRW*LWLCLW
Trigger: CCACAAGCACAGCCAGAGCAACCAGCGTCGGACAAT...TGTAGTTGTACGTAGCAGTGACATGGTAAGCTCTTTAAAACCAATATCTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR-3UTR CAA 90 bp AAGCTGTTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGAGGGGCACGATGCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 3 (lower is better)
Translates to: KLFSGRKEVLPSKKRGTMQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...CATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR TCA 72 bp GTAGGTACATCAGCTTACATAGTAAGATGTGATGACTaGAGCCTATTCAGCATTCAGGAGGCTGAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: VGTSAYIVRCDD*SLFSIQEAEAR
Trigger: CCTTGCCTCAGCCTCCTGAATGCTGAATAGGCTTCAGTCATCACATCTTACTATGTAAGCTGATGTACCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR GCA 72 bp TTCTGTCCATACACAGCACAGCAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCACTTAAAATCTCCGAA +
Preference number: 3 (lower is better)
Translates to: FCPYTAQQAFRV*RESSLALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGCTGTGCTGTGTATGGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR CCA 72 bp GTACAGCTCTGTAGGCATAGACCACAATATAGCATCTaGGTCCTAAATTACTGTAGAGGCTTATGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: VQLCRHRPQYSI*VLNYCRGLWPR
Trigger: TCTTGGCCATAAGCCTCTACAGTAATTTAGGACCCAGATGCTATATTGTGGTCTATGCCTACAGAGCTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 72 bp AGCCTGATTAGCATTCAATCATTGGAAGCTACATGGTaGAAGGAGAGACTTCCACAGACATATTGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SLISIQSLEATW*KERLPQTYCGK
Trigger: CTTGCCACAATATGTCTGTGGAAGTCTCTCCTTCCACCATGTAGCTTCCAATGATTGAATGCTAATCAGGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR-3UTR CAA 90 bp ACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCTTCATGTTTCAAATATaGGTTACCGGAAAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: TMLGCVETADKACRQRKCFMFQI*VTGKEV
Trigger: CACTTCCTTTCCGGTAACCAATATTTGAAACATGAA...GCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
3UTR TCA 72 bp TGCTTCTCTAGCATCTGTAGAATAAGGCAGTACACGTaGGTGTGCCCATTACAAAGAAGGCTTTATTCTCTG +
Preference number: 3 (lower is better)
Translates to: CFSSICRIRQYT*VCPLQRRLYSL
Trigger: CAGAGAATAAAGCCTTCTTTGTAATGGGCACACTCACGTGTACTGCCTTATTCTACAGATGCTAGAGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR TCA 72 bp ACCCATTTTCTAAACTGCAGATTACTAGGCCTGGCATaGTTACGTACATCTGTAATCCCATCAGTTGGAAGG +
Preference number: 3 (lower is better)
Translates to: THFLNCRLLGLA*LRTSVIPSVGR
Trigger: CCTTCCAACTGATGGGATTACAGATGTACGTAATCATGCCAGGCCTAGTAATCTGCAGTTTAGAAAATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp TTAAGCCTGATTAGCATTCAATCATTGGAAGCTACATaGTGGAAGGAGAGACTTCCACAGACATATTGTGGC +
Preference number: 3 (lower is better)
Translates to: LSLISIQSLEAT*WKERLPQTYCG
Trigger: GCCACAATATGTCTGTGGAAGTCTCTCCTTCCACCATGTAGCTTCCAATGATTGAATGCTAATCAGGCTTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 72 bp ACACACATACCACACACACATACACATGGAGAACAATaGAAGAACATGCTATCAGGCCATCAAACTGGATCA +
Preference number: 3 (lower is better)
Translates to: THIPHTHTHGEQ*KNMLSGHQTGS
Trigger: TGATCCAGTTTGATGGCCTGATAGCATGTTCTTCCATTGTTCTCCATGTGTATGTGTGTGTGGTATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR CCA 72 bp ACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTaGCTTCTCAACGGGACAAAGACAGTAAGCCTATTG +
Preference number: 3 (lower is better)
Translates to: TLGKDPSGMLKL*LLNGTKTVSLL
Trigger: CAATAGGCTTACTGTCTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp ATGAGAACTCTGTCTTTTTGTTTGATGTATGCTTGCTaGAGGGAAAATGGGAAGGACAACCAAGAACTGAGA +
Preference number: 3 (lower is better)
Translates to: MRTLSFCLMYAC*RENGKDNQELR
Trigger: TCTCAGTTCTTGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR GCA 72 bp GATAGAGATGAGAACTCTGTCTTTTTGTTTGATGTATaGTTGCTGCAGGGAAAATGGGAAGGACAACCAAGA +
Preference number: 3 (lower is better)
Translates to: DRDENSVFLFDV*LLQGKWEGQPR
Trigger: TCTTGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CCA 72 bp CACAGCAAGCATTCAGAGTTTGCAGAGAATCCAGCTTaGCACTTAAAATCTCCGAATCCACTTTCTCAATTA +
Preference number: 3 (lower is better)
Translates to: HSKHSEFAENPA*HLKSPNPLSQL
Trigger: TAATTGAGAAAGTGGATTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
3UTR CCA 72 bp TATAGCATCTGGGTCCTAAATTACTGTAGAGGCTTATaGCCAAGAGTAGAGGTCCATATATTTGGAGATCAG +
Preference number: 3 (lower is better)
Translates to: YSIWVLNYCRGL*PRVEVHIFGDQ
Trigger: CTGATCTCCAAATATATGGACCTCTACTCTTGGCCATAAGCCTCTACAGTAATTTAGGACCCAGATGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
3UTR TCA 72 bp ACCCATTTGGTACAACTAACTTGGTTAGCTGTTCTTTaGCCTCCAGGTATACATATCTTTGTGCATGTACAC +
Preference number: 3 (lower is better)
Translates to: THLVQLTWLAVL*PPGIHIFVHVH
Trigger: GTGTACATGCACAAAGATATGTATACCTGGAGGTCAAAGAACAGCTAACCAAGTTAGTTGTACCAAATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp TCAGCAGACAGGAGACCTGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCACTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SADRRPGWAPKTVSVRMPLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...TGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp TCCACTGTGCCCACAGCGAGCTGGAGGAACTCCTCCAACTGCTGCCCTGGAGGCAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: STVPTASWRNSSNCCPGGSCQAL*LYSLTS
Trigger: GCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCT...GCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCACAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR GCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGCAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: GTQDCERPDANKLKLGAGQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR GCA 90 bp GGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGACCGGACTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GTQDCERPDANKLKLGAGTGLHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT...CCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp GGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCCAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GQDQGLSSPGSQVGTILPNSSNC*PGGCLL
Trigger: CAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTT...GGGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGGCTGGCGGGCCCCTCCTGTTaGCCCATGACGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VQVTYCQLQVLSRQETWLAGPSC*PMTKSC
Trigger: GCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGC...CAGCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR TCA 90 bp ACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGCTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TEVGRRVRACIHCRAAIRLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...CCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp ACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TAMQEAQHLYCIHGKADQSGQGS*CLQCGH
Trigger: GTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACT...CTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATCCCAGAGCAGCAGTGTaGAAGCCTGATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: GEASESVHTLQSSNPDSHPRAAV*KPDHGR
Trigger: CCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGG...ATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp CAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QDCERPDANKLKLGAGVCAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...ACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCGCAACCAGCCGCCTCTaGCCAGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: STEVGRRVRACIHCRAAIATSRL*PEEPSW
Trigger: CCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGC...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCCTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp GCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGGGACCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ASFRTSLFLSSRGLAKARGPAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGGTCC...CCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
CDS-3UTR TCA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCTTCCTTCTCTGGCATTaGAGCCTGCACAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPFLLWH*SLHSQC
Trigger: GCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAA...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATACCGCTGGCGGAACATaGTCCGAACATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GEASESVHTLQSSNPDSHTAGGT*SEHQHG
Trigger: GCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGT...ATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp GACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACACACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: DPSAAQLPIPDRHGRAPTHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...TGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp AGGAACTCCTCCAACTGCTGCCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCACTTAGTGGCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RNSSNCCPGGCL*RSPAKHLVAAV
Trigger: CACTGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CAA 72 bp TGGAGGAACTCCTCCAACTGCTGCCCTGGAGGCTGCTaGTTGAGGAGCCCTGCAAAGCACTTAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: WRNSSNCCPGGC*LRSPAKHLVAA
Trigger: TGCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp ACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGACCGGACTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TAMQEAQHLYCIHGKADQTGLHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT...CTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGPAFVLHPWEGRPVVLPAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...AGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCCAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCCAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: RRPSICTASMGRQTSSLAQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...GGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGCAGGGAGTGGAGAGCTaGCAGGCCCTCTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SRSHSTALTLQQHSFLFLQGVES*QALCLY
Trigger: GTAGAGGCAGAGGGCCTGGCAGCTCTCCACTCCCTG...CAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAGCAACCAGCCGCCTCTaGCCAGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQATSRL*PEEPSW
Trigger: CCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGC...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AAGTGGTCTGTCCACAGAAGCAGAGACTGCTTAGTGCCACCGGAGTCTGCCATTGCAACCAGCCGCCTCTaGCCAGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KWSVHRSRDCLVPPESAIATSRL*PEEPSW
Trigger: CCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGC...AATGGCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGGCCCGCCTCCACTGTaGCCACAGCGAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TASMGRQTSSLALWDGSIGPPPL*PQRAGG
Trigger: TCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCC...TATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCACATCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGTSAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGT...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGAGGAGCCATCCTGGAACGGCTGGAACTGGTCAGGGAAGCTGTTTTCAGGTAACATCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRSHPGTAGTGQGSCFQVTSAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGT...TACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp GTGGGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAACATCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGPSALATSDSPLCSSSATSAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGT...TGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp CAGTTCTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTAACATCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QFSRSHSTALTLQQHSFLTSAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGT...TAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCCACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CGCACCTGCAGCTGCCTGCAACAGCTTAGCGCTAGGCCATACAAGTTTCATGTCCACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RTCSCLQQLSARPYKFHVHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...GACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR CCA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCTGGAACGGCTGGAACTaGTCAGGGAAGCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPWNGWN*SGKLFS
Trigger: TGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCA...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp AGGTGCTCACAGGCCCGGGCAGACGCACCTGCAGCTGCCTGCAACAGCTTAGCGTCCCCATCCATCACCTaGATGAAGCCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: RCSQARADAPAAACNSLASPSIT*MKPNVK
Trigger: CTTCACATTTGGCTTCATCCAGGTGATGGATGGGGA...CGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR TCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGGCGGGCCCCTCCTGTTaGCCCATGACGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRAGPSC*PMTKSC
Trigger: GCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGC...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGCTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGACTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
CDS-3UTR TCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SRSHSTALTLQQHSFLFLGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...CAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADAWAAC*VRETDP
Trigger: AGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGC...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTTGGGGAGCAAGTGTCACCGGACTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PHLTPLYAAPQQAWGASVTGLHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT...GACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GPSALATSDSPLCSSSASSCQAL*LYSLTS
Trigger: GCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCT...GCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR GCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGACGTTGCTGGTGAGGTaGTCACAGGCCCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWTLLVR*SQARAD
Trigger: GTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGT...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CACAGGCTTGGGCAGCCTGTTGAGTACGTGAGACAGACCCTTCAGATAGTTTGGCACGCAGTCAGGGAGTaGAGAGCTGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HRLGQPVEYVRQTLQIVWHAVRE*RAARPS
Trigger: AGAGGGCCTGGCAGCTCTCCACTCCCTGACTGCGTG...CCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR CCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCGCGGGCCCCTCCTGTTaGCCCATGACGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRNHSPLADTASFRTSLFAGPSC*PMTKSC
Trigger: GCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGC...GAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp CAGTTCTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTAGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QFSRSHSTALTLQQHSFLVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...TAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAAGGAGCAAGTGTCTGCTaGAGGCTCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: LTLQQHSFLFLTDTGEPQGASVC*RLQDTE
Trigger: CTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCC...TTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADSKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGA...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAACCGCTGGCGGAACATaGTCCGAACATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LHSHAGGPAFVLHPWEGRTAGGT*SEHQHG
Trigger: GCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGT...TCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: LEVTLHCTDPSAAQLPIPAWAAC*VRETDP
Trigger: AGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGC...AGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTGAGTAACTGGAGCGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: ERAYTAEQQSGQPLSNWSAWAAC*VRETDP
Trigger: AGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGC...GCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp TATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGGATGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: YQQEGEAPVTGQGQGEWGCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...TCCCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TASFRTSLFLSSRGLAKAAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...AGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQAPAAA*NSLALG
Trigger: GCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGC...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCACAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCGTACAGGTGACCTACTaGCAGCTCCAAGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: STEVGRRVRACIHCRAAIVQVTY*QLQVLS
Trigger: GCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp GCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGG +
Preference number: 4 (lower is better)
Translates to: ALTLQQHSFLFLTDTGEPTADKA*RQRKCR
Trigger: CCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGT...GGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQCCPGG*LLRSPA
Trigger: TGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCA...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCAGGAACTCCTCCAACTaGTGCCCTGGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRPSICTASMGRQTSSLARNSSN*CPGGCL
Trigger: CAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT...GGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCAGGAACTCCTCCAACTaGTGCCCTGGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVRNSSN*CPGGCL
Trigger: CAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCAGGCCCGCCTCCACTGTaGCCACAGCGAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPAGPPPL*PQRAGG
Trigger: TCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCC...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAGGCCCGCCTCCACTGTaGCCACAGCGAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IPDRHGRAPTSKVFSSNTGPPPL*PQRAGG
Trigger: TCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCC...TGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGGAAGCCATCAGCTGCTaGACAGCCAAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: TEVGRRVRACIHCRAAIREAISC*TAKFWI
Trigger: GATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTC...CCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QQHSFLFLTDTGEPQHPRGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...CCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTGGCCACAGCTCTGCTTCAAAAGCTCCCGCATGAGTCGGTTCAGCTGAGGGATGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VATALLQKLPHESVQLRDGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...ATCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp CAGTCGGTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCAAACCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSVQVTYCQLQVLSRQETKPLYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGGTTT...GGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTACCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR CCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSRNHSPLADTASFRTSLDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp AGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCAGCAGACAGGAGACCTaGCTGGGCACCCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: RRPSICTASMGRQTSSLASRQET*LGTQDC
Trigger: ACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCT...GGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTAGCAGACAGGAGACCTaGCTGGGCACCCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: PSLTLLPFAQVSSCRPEASRQET*LGTQDC
Trigger: ACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCT...AGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGTTCTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTACCAGAGGAGCCATCCTaGAACGGCTGGAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QFSRSHSTALTLQQHSFLPEEPS*NGWNWS
Trigger: TGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGG...TAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGGACCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTGPAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGGTCC...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
CDS-3UTR TCA 90 bp AGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGGCGGGCCCCTCCTGTTaGCCCATGACGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RQTSSLALWDGSIVSTCRAGPSC*PMTKSC
Trigger: GCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGC...CCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCATGGTGCCTGCAGTCTTaGAGGATGTTGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPWCLQS*RMLLRK
Trigger: CTTCCTCAGCAACATCCTTCAAGACTGCAGGCACCA...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: KSWLFKSFAQPCRRPSICSGQGS*CLQCGH
Trigger: GTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACT...ACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSIVSTCRLDCQEGLGQDSGQGS*CLQCGH
Trigger: GTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACT...GTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGGAGCAAGTGTCTGCTaGAGGCTCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: STALTLQQHSFLFLTDTGGASVC*RLQDTE
Trigger: CTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCC...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCATGCTCTAGCCACATCTaGCTCCCCTTTATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPCSSHI*LPFMQL
Trigger: GAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCA...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCA +
Preference number: 4 (lower is better)
Translates to: TEVGRRVRACIHCRAAIRTCWRL*QTATTS
Trigger: TGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGT...CCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAACCGCTGGCGGAACATaGTCCGAACATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQTAGGT*SEHQHG
Trigger: GCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGT...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCACCGGACTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ICTASMGRQTSSLALWDGTGLHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCT +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQRRTCS*LQQLSA
Trigger: AGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCT...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTGTACAGGTGACCTACTaGCAGCTCCAAGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGPAFVLHPWEGRPVVLPVQVTY*QLQVLS
Trigger: GCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC...AGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCTGCTGGCATTTTTCTaGCACCTGCTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADLLAFF*HLLETL
Trigger: CAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAG...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGACTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: STALTLQQHSFLFLTDTGLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACTTGTTGAGGAGCCCTaGAAAGCACTTAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LHSHAGGPAFVLHPWEGRLVEEP*KALSGG
Trigger: GCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAG...TCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCATGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ILPSLTLLPFAQVSSCRPCCPGG*LLRSPA
Trigger: TGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCA...TGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp AAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGATGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KSFAQPCRRPSICTASMGCCPGG*LLRSPA
Trigger: TGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCA...TCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGAAGCCATCAGCTGCTaGACAGCCAAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPEAISC*TAKFWI
Trigger: GATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTC...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGGPAFVLHPWEGRPVVLGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...CAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: STALTLQQHSFLFLTDTGDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: FAQPCRRPSICTASMGRQDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GGACCATCTGCTCTAGCCACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GPSALATSDSPLCSSSASDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...GCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCAGATGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp GGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GGPAFVLHPWEGRPVVLPRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...AGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCCTCTCAGGGTCCTGCTaGCATTTTTCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGLSGSC*HFSATC
Trigger: GCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGACCAGAGGAGCCATCCTaGAACGGCTGGAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRPEEPS*NGWNWS
Trigger: TGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGG...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGCTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VTLHCTDPSAAQLPIPDRLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...TCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTG +
Preference number: 4 (lower is better)
Translates to: HSHAGGPAFVLHPWEGRPAAWKP*TKAGTL
Trigger: CAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGC...TGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTG +
Preference number: 4 (lower is better)
Translates to: LTLQQHSFLFLTDTGEPQAAWKP*TKAGTL
Trigger: CAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGC...TTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCCTCAGAGTGGAAAGCTaGACCACAGAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVLRVES*TTESGQ
Trigger: CTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAG...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGGGAGACAGCTCAGAGTaGAAAGCTGGACCACAGAGT +
Preference number: 4 (lower is better)
Translates to: QQHSFLFLTDTGEPQHPRGDSSE*KAGPQS
Trigger: ACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCC...CCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADLEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp GTAAGTCTGGCATTTGAGGACCTAGGAGGTCTGGCCTaGCCAGAGCAGCAGTGTGAAAGCCTGATCACGGGA +
Preference number: 4 (lower is better)
Translates to: VSLAFEDLGGLA*PEQQCESLITG
Trigger: TCCCGTGATCAGGCTTTCACACTGCTGCTCTGGCAAGGCCAGACCTCCTAGGTCCTCAAATGCCAGACTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CAA 72 bp CTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTaGTCGTCCAGAGGCTTGGCTAAGGCTCGGATGACC +
Preference number: 4 (lower is better)
Translates to: LADTASFRTSLF*SSRGLAKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000166090.8
ENSMUST00000167927.8
3UTR CAA 72 bp GGAGCGGCATGGAAACCTTGGACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGGCGGAACATGATCCGA +
Preference number: 4 (lower is better)
Translates to: GAAWKPWTKAGT*SVKNRWRNMIR
Trigger: TCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp AAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTCTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSWLFKSFAQPCRRPSICLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...ACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCAGCATAGCTGGTCTTTaGAGCTACTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALTLQQHSFLFLTDTGEPSIAGL*SYSEAF
Trigger: AAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCT...GGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGGGTCTGTTAGAGCCATaGACACCAATGAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: TEVGRRVRACIHCRAAIRGLLEP*TPMSIA
Trigger: AGCTATGCTCATTGGTGTTCATGGCTCTAACAGACC...CCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ICTASMGRQTSSLALWDGVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTGTCAGTCGGTACAGGTaGCCTACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TASFRTSLFLSSRGLAKAVSRYR*PTASSK
Trigger: CTTGGAGCTGGCAGTAGGTCACCTGTACCGACTGAC...AGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGAGTGGCCAGGGTTCCTaGTGCCTCCAGTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQSGQGS*CLQCGH
Trigger: GTGGCCGCACTGGAGGCATCAGGAACCCTGGCCACT...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCTGCTCTAGCCACATCTaGCTCCCCTTTATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGCSSHI*LPFMQL
Trigger: GAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCA...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTGAGTAACTGGAGCGAGGCAGTGTCTCCTTaGCAATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: ERAYTAEQQSGQPLSNWSEAVSP*QCWDVL
Trigger: CAACACATCCCAGCATTGTCAAGGAGACACTGCCTC...GCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGGAGGCAGTGTCTCCTTaGCAATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: FAQPCRRPSICTASMGRQEAVSP*QCWDVL
Trigger: CAACACATCCCAGCATTGTCAAGGAGACACTGCCTC...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKSKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGA...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AGGPAFVLHPWEGRPVVLQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...CAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTATCAATTTTGCATCTTAGTTCTGTGGCCCTGGCCCTGGGTGCCCTAACCATGACCGCTGGCGGAACATaGTCCGAACATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LSILHLSSVALALGALTMTAGGT*SEHQHG
Trigger: GCCATGCTGATGTTCGGATCATGTTCCGCCAGCGGT...CATGGTTAGGGCACCCAGGGCCAGGGCCACAGAACTAAGATGCAAAATTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAACAGGCACATTGTCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQQAHCL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTG...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCCAGGCACATTGTCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLQAHCL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTG...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp ACAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TMLGCVETADKACRQRKCAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...GCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR GCA 90 bp CATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGGCACCTGCAGCTGCCTaGAACAGCTTAGCGCTAGGC +
Preference number: 4 (lower is better)
Translates to: HGSLRVLHSHAGGPAFVLAPAAA*NSLALG
Trigger: GCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGC...CAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMPGRRT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGG...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGTTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGACAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGGTACAGGTGACCTACTaGCAGCTCCAAGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRVQVTY*QLQVLS
Trigger: GCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVCRQRK*REHLVG
Trigger: TCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCA...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTCTGCTGGCATTTTTCTaGCACCTGCTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: PSLTLLPFAQVSSCRPEALLAFF*HLLETL
Trigger: CAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAG...AGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp GACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: DPSAAQLPIPDRHGRAPTSGIEA*TANANR
Trigger: CCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA...TGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGACTTGTTGAGGAGCCCTaGAAAGCACTTAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRLVEEP*KALSGG
Trigger: GCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAG...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp ATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAAGGAACTCCTCCAACTaGTGCCCTGGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILPSLTLLPFAQVSSCRPRNSSN*CPGGCL
Trigger: CAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT...TGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVREAIS*CTAKFW
Trigger: CCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCT...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGREAIS*CTAKFW
Trigger: CCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCT...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSLTLLPFAQVSSCRPEAREAIS*CTAKFW
Trigger: CCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCT...AGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAAACCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGKPLYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGGTTT...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAAACCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FAQPCRRPSICTASMGRQKPLYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGGTTT...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTCCAGAGGAGCCATCCTaGAACGGCTGGAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVPEEPS*NGWNWS
Trigger: TGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGG...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TASFRTSLFLSSRGLAKALQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...AGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FAQPCRRPSICTASMGRQCTAKF*ITEEAH
Trigger: ATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCA...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTCTTGGGGAGCGGCATaGAAACCTTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RRPSICTASMGRQTSSLASWGAA*KPWTKA
Trigger: TGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGA...GGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FAQPCRRPSICTASMGRQLEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp ACATCTGACTCCCCTTTATGCAGCTCCTCAGCAAGCTaGGGGAGCAAGTGTCTGCTGAAGGCTCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: TSDSPLCSSSAS*GSKCLLKAPGY
Trigger: GTATCCTGGAGCCTTCAGCAGACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR CAA 72 bp GACAAAGCTTGCAGACAGCGGAAATGCCGGGAACATTaGGTGGGACCATCTGCTCTAGCCACATCTGACTCC +
Preference number: 4 (lower is better)
Translates to: DKACRQRKCREH*VGPSALATSDS
Trigger: GGAGTCAGATGTGGCTAGAGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR TCA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCGCGGGCCCCTCCTGTTaGCCCATGACGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGAGPSC*PMTKSC
Trigger: GCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGC...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCGGAGCAAGTGTCTGCTaGAGGCTCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: SRNHSPLADTASFRTSLFGASVC*RLQDTE
Trigger: CTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCC...GAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGAGAGGCAGTGTCTCCTTaGCAATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: VTLHCTDPSAAQLPIPDREAVSP*QCWDVL
Trigger: CAACACATCCCAGCATTGTCAAGGAGACACTGCCTC...TCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACTTCCCTTTGTTTGCTTaGCAGAGATGCTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADFPLFA*QRCCSS
Trigger: GCTACTGCAGCATCTCTGTCAAGCAAACAAAGGGAA...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGATTCCTTCTCTGGCATTaGAGCCTGCACAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: VTLHCTDPSAAQLPIPDRFLLWH*SLHSQC
Trigger: GCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAA...TCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SRNHSPLADTASFRTSLFSKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGA...GAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGTTCCCAGAGCAGCAGTGTaGAAGCCTGATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCATTARQDEFQFWFCFVPRAAV*KPDHGR
Trigger: CCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGG...AACAAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp AAGTGGTCTGTCCACAGAAGCAGAGACTGCTTAGTGCCACCGGAGTCTGCCATTCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KWSVHRSRDCLVPPESAIQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...AATGGCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTGGACAGACCACTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTCAGGCACATTGTCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVQAHCL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTG...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LHSHAGGPAFVLHPWEGRNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...TCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: AGGPAFVLHPWEGRPVVLWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...CAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGAAATACCAGTAGCTCTCAGGGTCCTGCTGGCATTTTTCTGCCACCTGCTGGATGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GNTSSSQGPAGIFLPPAGCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...TCCAGCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAGCTACTGGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR GCA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCGCAGGGCCACAGACATaGTCAGTGCCCTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGAGPQT*SVPSGP
Trigger: AGGGCCTGAGGGCACTGAGCATGTCTGTGGCCCTGC...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTACAGGTGACCTACTGCCAGCTCCAAGTCCTCAGCAGACAGGAGACCTGGCTGCAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VQVTYCQLQVLSRQETWLQAFRV*RESSLA
Trigger: TGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTG...CAGCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTCACCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR GCA 90 bp GGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GSIVSTCRLDCQEGLGQDSCQAL*LYSLTS
Trigger: GCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCT...GTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATAAGCTGCCAGGCCCTCTaGCTCTACTCGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: LFLTDTGEPQHPRSFPQISCQAL*LYSLTS
Trigger: GCTAGTGAGCGAGTAGAGGCAGAGGGCCTGGCAGCT...TATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTGAGTAACTGGAGCTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ERAYTAEQQSGQPLSNWSSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...GCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp TCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRSHSTALTLQQHSFLFLSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...CAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQCRQRK*REHLVG
Trigger: TCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCA...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGG +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRTADKA*RQRKCR
Trigger: CCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGT...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp CAGTTCTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: QFSRSHSTALTLQQHSFLSGIEA*TANANR
Trigger: CCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA...TAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAGCAACCAGCCGCCTCTaGCCAGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: EPQHPRSFPQIQVSVSSTATSRL*PEEPSW
Trigger: CCAGGATGGCTCCTCTGGGCAGAGGCGGCTGGTTGC...TGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGTGCTGCCCTGGAGGCTaGTTGTTGAGGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMCCPGG*LLRSPA
Trigger: TGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCA...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KSFAQPCRRPSICTASMGNSSNC*PGGCLL
Trigger: CAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTT...TCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGAGAGAAGCCATCAGCTaGTGCACAGCCAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRREAIS*CTAKFW
Trigger: CCAGAACTTGGCTGTGCAGCAGCTGATGGCTTCTCT...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCGGGAACATTTTTCCAGAGAGGACCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: DVLKQLTKLADSGNAGNIFPERT*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGGTCCTCTCTGGAAA...AATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
CDS-3UTR GCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTATTTCCAGAGAGGACCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVFPERT*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGGTCCTCTCTGGAAA...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
CDS-3UTR CCA 90 bp GCAGCTGCCTGCAACAGCTTAGCGCTAGGCCATACAAGTTTCATGTCTGGTTCAGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AAACNSLALGHTSFMSGSGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...TGAACCAGACATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTGAGCGTCCGGATGCCAACAAGCTGAAGCTGGGTTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: WLGTQDCERPDANKLKLGCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...ACCCAGCTTCAGCTTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCAAGCAGACAGGAGACCTaGCTGGGCACCCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTASRQET*LGTQDC
Trigger: ACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCT...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTCTCTCAGGGTCCTGCTaGCATTTTTCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VGTILPSLTLLPFAQVSSLSGSC*HFSATC
Trigger: GCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG...AGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CTCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTTGGAACGGCTGGAACTaGTCAGGGAAGCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LEVTLHCTDPSAAQLPIPWNGWN*SGKLFS
Trigger: TGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCA...AGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGTGGAACGGCTGGAACTaGTCAGGGAAGCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRSHSTALTLQQHSFLFLWNGWN*SGKLFS
Trigger: TGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCA...CAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACAGATTTCCACATTTCGTaGCAGGGAGCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: DPSAAQLPIPDRHGRAPTDFHIS*QGADKS
Trigger: GCTTTTGTCTGCTCCCTGCCACGAAATGTGGAAATC...TGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATTGAGTAACTGGAGCGAGAAAGGACAGCTGTaGCCACAGCTCTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ERAYTAEQQSGQPLSNWSEKGQL*PQLCFK
Trigger: TTTGAAGCAGAGCTGTGGCCACAGCTGTCCTTTCTC...GCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRCTAKF*ITEEAH
Trigger: ATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCA...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGATGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRCTAKF*ITEEAH
Trigger: ATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCA...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGTGCACAGCCAAGTTCTaGATCACTGAGGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWCTAKF*ITEEAH
Trigger: ATGGGCCTCCTCAGTGATCCAGAACTTGGCTGTGCA...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGTCTTGGGGAGCGGCATaGAAACCTTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGA...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTCTCAGAGTGGAAAGCTaGACCACAGAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVLRVES*TTESGQ
Trigger: CTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAG...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAGGAGACAGCTCAGAGTaGAAAGCTGGACCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQGDSSE*KAGPQS
Trigger: ACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCC...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCCCCATCCATCACCTaGATGAAGCCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: QQHSFLFLTDTGEPQHPRSPSIT*MKPNVK
Trigger: CTTCACATTTGGCTTCATCCAGGTGATGGATGGGGA...CCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGTGCTCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMCSLYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGAGCA...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163287.8
3UTR CAA 72 bp GTTTGGCTTCACATCTTGGGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATTGTCTGTGAAGAACCG +
Preference number: 4 (lower is better)
Translates to: VWLHILGSGMET*DQSRHIVCEEP
Trigger: CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGATGTGAAGCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
3UTR CAA 72 bp AGATCAGCTTTCACCTTGGGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATTGTCTGTGAAGAACCG +
Preference number: 4 (lower is better)
Translates to: RSAFTLGSGMET*DQSRHIVCEEP
Trigger: CGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGTGGTGCCTGCAGTCTTaGAGGATGTTGCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMWCLQS*RMLLRK
Trigger: CTTCCTCAGCAACATCCTTCAAGACTGCAGGCACCA...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTGCTCTAGCCACATCTaGCTCCCCTTTATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RNHSPLADTASFRTSLFLCSSHI*LPFMQL
Trigger: GAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCA...CAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCA +
Preference number: 4 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKTCWRL*QTATTS
Trigger: TGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGT...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCA +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGTCWRL*QTATTS
Trigger: TGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGT...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTTTCCTTCTCTGGCATTaGAGCCTGCACAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVFLLWH*SLHSQC
Trigger: GCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAA...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAATGAGTCGGTTCAGCTaGGGGATTTCCACATTTCGT +
Preference number: 4 (lower is better)
Translates to: STALTLQQHSFLFLTDTGMSRFS*GISTFR
Trigger: ACGAAATGTGGAAATCCCTCAGCTGAACCGACTCAT...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGCCCAGAGCAGCAGTGTaGAAGCCTGATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQPRAAV*KPDHGR
Trigger: CCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGG...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCACAGGCACATTGTCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAQAHCL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTG...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTAGACGCACCTGCAGCTaGCTGCAACAGCTTAGCGCT +
Preference number: 4 (lower is better)
Translates to: MGRQTSSLALWDGSIVSTRRTCS*LQQLSA
Trigger: AGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCT...AGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCCAGGAGAGAGACTGTAATTGAGCTGAAGCTAAAGCTAGTGCTGTGCATTAAAACGTTGCTGGTGAGGTaGTCACAGGCCCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PRRETVIELKLKLVLCIKTLLVR*SQARAD
Trigger: GTCTGCCCGGGCCTGTGAGCACCTCACCAGCAACGT...TTTAATGCACAGCACTAGCTTTAGCTTCAGCTCAATTACAGTCTCTCTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCATGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILPSLTLLPFAQVSSCRPCRQRK*REHLVG
Trigger: TCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCA...TGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCCTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCTTGTTGAGGAGCCCTaGAAAGCACTTAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: HGSLRVLHSHAGGPAFVLLVEEP*KALSGG
Trigger: GCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAG...CAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGGGCCCGCCTCCACTGTaGCCACAGCGAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRGPPPL*PQRAGG
Trigger: TCCTCCAGCTCGCTGTGGGCACAGTGGAGGCGGGCC...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp ATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGAGGCCTTTCATCTACATCTGCAGCCACCTaGTCAGCGGGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: MNTNEHSWSLKLLRGLSSTSAAT*SAGPSC
Trigger: ACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGT...AGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CGACGCTGGTTGCTCTGGCTGTGCTTGTGGAACTGTTCCAGCAGCAAGGGAAGCTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: RRWLLWLCLWNCSSSKGSCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...GCTTCCCTTGCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCAGCGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp GCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAAACCTCTCTACGGATaGAAGCCCAAAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASMGRQTSSLALWDGSIVKPLYG*KPKGWA
Trigger: TGCCCAGCCTTTGGGCTTCCATCCGTAGAGAGGTTT...AACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGATTGTCCGACGCTaGTTGCTCTGGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCRIVRR*LLWLCL
Trigger: CAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCT...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGACAGGAGACCTGGCTaGGCACCCAAGACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTSSLALWDGSIVSTCRLDRRPG*APKTVS
Trigger: GCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTC...TAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCACCAGAGGAGCCATCCTaGAACGGCTGGAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPAPEEPS*NGWNWS
Trigger: TGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTGG...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTGTATGGCAGTAGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCGATTTCCACATTTCGTaGCAGGGAGCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: LYGSSTEVGRRVRACIHCDFHIS*QGADKS
Trigger: GCTTTTGTCTGCTCCCTGCCACGAAATGTGGAAATC...GCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCTACTGCCATACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGAGAAAGGACAGCTGTaGCCACAGCTCTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWEKGQL*PQLCFK
Trigger: TTTGAAGCAGAGCTGTGGCCACAGCTGTCCTTTCTC...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTCCAACTGCTGCCCTaGAGGCTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVLQLLP*RLLVEE
Trigger: CTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAG...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGTCTTGGGGAGCGGCATaGAAACCTTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGA...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTCTTGGGGAGCGGCATaGAAACCTTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VGTILPSLTLLPFAQVSSSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGA...AGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp TCGAGGTCACACTCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRSHSTALTLQQHSFLFLTLQIV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGT...CAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGAGTGTGACCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGGCAAGGAAAGAAGTGTaGGCAGCTCTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AGGPAFVLHPWEGRPVVLARKEV*AALVKA
Trigger: TGCTTTTACCAGAGCTGCCCACACTTCTTTCCTTGC...CAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGATCCCCATCCATCACCTaGATGAAGCCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: STALTLQQHSFLFLTDTGSPSIT*MKPNVK
Trigger: CTTCACATTTGGCTTCATCCAGGTGATGGATGGGGA...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CACTTAAAATCTCCGAATCCACTTTCTCAATTAGCAGAGGCAGTAAGAACTCGGCTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: HLKSPNPLSQLAEAVRTRLEQHL*QKLGSS
Trigger: CGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAG...CCGAGTTCTTACTGCCTCTGCTAATTGAGAAAGTGGATTCGGAGATTTTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000169775.8
CDS-3UTR TCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGAGCATAGCTGGTCTTTaGAGCTACTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRSIAGL*SYSEAF
Trigger: AAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCT...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTGCTCTAGCCACATCTaGCTCCCCTTTATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVCSSHI*LPFMQL
Trigger: GAGCTGCATAAAGGGGAGTCAGATGTGGCTAGAGCA...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGTCAAAAGCTCCCGCATaGGTCGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IVSTCRLDCQEGLGQDQGSKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCGACTCATGCGGGAGCTTTTGA...CCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACACCCAGAGCAGCAGTGTaGAAGCCTGATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPQHPRSFPQIQVSVSSTPRAAV*KPDHGR
Trigger: CCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGG...TGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AGCTCTGTCCAGTCCAAGAGGAACCCATTTTCTAAACTGCAGATTACTAGGCCTGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: SSVQSKRNPFSKLQITRPAWAAC*VRETDP
Trigger: AGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGC...AGGCCTAGTAATCTGCAGTTTAGAAAATGGGTTCCTCTTGGACTGGACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ACAGGTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGGTTGCTCTGGCTGTaGTTGTGGAACTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGVCHHCPARRVSILVLFWLLWL*LWNCSS
Trigger: GCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCA...AAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGG +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHTADKA*RQRKCR
Trigger: CCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGT...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTCTGTGGCCACAGCTCTaGTTCAAAAGCTCCCGCATG +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTLWPQL*FKSSRM
Trigger: CATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAG...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCAAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPANSSNC*PGGCLL
Trigger: CAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTT...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGCTCTGTCCAGTCCAAGAGGAACCCATTTTCTAAACTGCAGATTACTAGGCCTAGGAACTCCTCCAACTaGTGCCCTGGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSVQSKRNPFSKLQITRPRNSSN*CPGGCL
Trigger: CAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCT...AGGCCTAGTAATCTGCAGTTTAGAAAATGGGTTCCTCTTGGACTGGACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCAGAAGCCATCAGCTGCTaGACAGCCAAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAEAISC*TAKFWI
Trigger: GATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTC...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGGAAGCCATCAGCTGCTaGACAGCCAAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: RQTSSLALWDGSIVSTCREAISC*TAKFWI
Trigger: GATCCAGAACTTGGCTGTGCAGCAGCTGATGGCTTC...CCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATAAGGCGAGTGAGAGCGTaGATACACTGCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFLTDTGEPQHPRSFPQIRRVRA*IHCRAA
Trigger: TGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCT...TATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAATGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: LTLQQHSFLFLTDTGEPQCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...TTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: QQHSFLFLTDTGEPQHPRCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...CCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACAACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: DPSAAQLPIPDRHGRAPTTNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...TGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGCACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: STEVGRRVRACIHCRAAITNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...GATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATTTCCACATTTCGTaGCAGGGAGCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PSICTASMGRQTSSLALWDFHIS*QGADKS
Trigger: GCTTTTGTCTGCTCCCTGCCACGAAATGTGGAAATC...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCTGTGAAGAACCGCTaGCGGAACATGATCCGAACA +
Preference number: 4 (lower is better)
Translates to: RNHSPLADTASFRTSLFLSVKNR*RNMIRT
Trigger: TGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...CAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PAFVLHPWEGRPVVLPCGTLQIV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGT...CCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSRNHSPLADTASFRTSLTLQIV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGT...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGGCAAGGAAAGAAGTGTaGGCAGCTCTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRARKEV*AALVKA
Trigger: TGCTTTTACCAGAGCTGCCCACACTTCTTTCCTTGC...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTCTCAGAGTGGAAAGCTaGACCACAGAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTLRVES*TTESGQ
Trigger: CTGCCCTGACTCTGTGGTCCAGCTTTCCACTCTGAG...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCGGAGACAGCTCAGAGTaGAAAGCTGGACCACAGAGT +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCGDSSE*KAGPQS
Trigger: ACTCTGTGGTCCAGCTTTCCACTCTGAGCTGTCTCC...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CAATGCTGGGATGTGTTGAAACAGCTGACAAAGCTTGCAGACAGCGGAAATGCCTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QCWDVLKQLTKLADSGNALEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...GGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
3UTR CAA 72 bp GCTGTAGCTTTAGGAATCCCAGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCTGGCTGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AVALGIPGSFQG*SDAGCSGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAATCCTTGAAATGATCCTGGGATTCCTAAAGCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
3UTR CAA 72 bp ACACTCCTTCTACATGTGGCTCGGGGCTTTGGTGGCTaGGATGAGATGTCTGTCTCTGGTAAGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: TLLLHVARGFGG*DEMSVSGKSGI
Trigger: AATGCCAGACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CAA 72 bp CAGTCAGATGAATCTGTGTCAGTCCTTCCTTCCTCTTaGCCCCATCGTCACCACATTCCCACCTCTACTGTG +
Preference number: 4 (lower is better)
Translates to: QSDESVSVLPSS*PHRHHIPTSTV
Trigger: CACAGTAGAGGTGGGAATGTGGTGACGATGGGGCAAAGAGGAAGGAAGGACTGACACAGATTCATCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCAGCATAGCTGGTCTTTaGAGCTACTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ICTASMGRQTSSLALWDGSIAGL*SYSEAF
Trigger: AAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCT...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCGGGCACCCAAGACTGTaGGCGTCCGGATGCCAACAA +
Preference number: 4 (lower is better)
Translates to: PQHPRSFPQIQVSVSSTIGHPRL*ASGCQQ
Trigger: TTGTTGGCATCCGGACGCTCACAGTCTTGGGTGCCC...GATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCGGAGCAAGTGTCTGCTaGAGGCTCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGGASVC*RLQDTE
Trigger: CTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCC...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATATTCCCTTTGTTTGCTTaGCAGAGATGCTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TASMGRQTSSLALWDGSIFPLFA*QRCCSS
Trigger: GCTACTGCAGCATCTCTGTCAAGCAAACAAAGGGAA...TATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCATTCCCTTTGTTTGCTTaGCAGAGATGCTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ILPSLTLLPFAQVSSCRPFPLFA*QRCCSS
Trigger: GCTACTGCAGCATCTCTGTCAAGCAAACAAAGGGAA...TGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp CCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACCTGCTGGAGACTCTaGCAGACAGCAACAACTTCA +
Preference number: 4 (lower is better)
Translates to: PIPDRHGRAPTSKVFSSNTCWRL*QTATTS
Trigger: TGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGT...ATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTTGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: KSWLFKSFAQPCRRPSICCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...ACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TACGAGGGTGAGCCAGGAAGCCCCGAGGATCCTCCCAAGAGATATAGTGTTCAACAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: YEGEPGSPEDPPKRYSVQQAFRV*RESSLA
Trigger: TGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTG...TTGAACACTATATCTCTTGGGAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
CDS-3UTR GCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTAACAGCTGACAAAGCTTaGAGACAGCGGAAATGCCGG +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVTADKA*RQRKCR
Trigger: CCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTGT...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGCTGCTGGCATTTTTCTaGCACCTGCTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMLLAFF*HLLETL
Trigger: CAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAG...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGGTAGAAAGGAAGTGTTaGCATCTAAGAAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFAQPCRRPSICTASMGRVERKC*HLRRGA
Trigger: TGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTAC...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCAAGTAGGAACCATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCGTAGAAAGGAAGTGTTaGCATCTAAGAAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PSRNHSPLADTASFRTSLVERKC*HLRRGA
Trigger: TGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTAC...GAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAATGGTTCCTACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR GCA 90 bp GTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAAGTAGAAAGGAAGTGTTaGCATCTAAGAAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLHPWEGRPVVLPCGMAQVERKC*HLRRGA
Trigger: TGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTAC...TTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCTTGTTGAGGAGCCCTaGAAAGCACTTAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGLVEEP*KALSGG
Trigger: GCCGCCACTAAGTGCTTTGCAGGGCTCCTCAACAAG...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTTTCAGGTAGAAAGGAAGTGTTGCCATCTAAGAAGAGGGGCACGATGCATGTGGATGGGACCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: FSGRKEVLPSKKRGTMHVDGTTR*WSFSRF
Trigger: GAACCGGCTGAAGGACCACCATCTTGTGGTCCCATC...CACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp CATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: HAGGPAFVLHPWEGRPVVCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...GACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ACTCTGGGAATCTTCCTCCAGGAAGGTCAGTCGGTACAGGTGACCTACTGCCAGTGTACATGTACCTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: TLGIFLQEGQSVQVTYCQCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAGGTACATGTACA...CTGGCAGTAGGTCACCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCTCTCAGGGTCCTGCTaGCATTTTTCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGLSGSC*HFSATC
Trigger: GCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGCTCTCAGGGTCCTGCTaGCATTTTTCTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQLSGSC*HFSATC
Trigger: GCAGGTGGCAGAAAAATGCCAGCAGGACCCTGAGAG...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTAAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: MGRQTSSLALWDGSIVSTSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...AGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATGGAACGGCTGGAACTaGTCAGGGAAGCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAWNGWN*SGKLFS
Trigger: TGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCA...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCGAGAAAGGACAGCTGTaGCCACAGCTCTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCEKGQL*PQLCFK
Trigger: TTTGAAGCAGAGCTGTGGCCACAGCTGTCCTTTCTC...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTACCCTTCAGATAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HSFLFLTDTGEPQHPRSFTLQIV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGT...AAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGCAAGGAAAGAAGTGTaGGCAGCTCTGGTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: TASMGRQTSSLALWDGSIARKEV*AALVKA
Trigger: TGCTTTTACCAGAGCTGCCCACACTTCTTTCCTTGC...TATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
3UTR CAA 72 bp TGGTCAGGGAAGCTGTTTTCAGGTAGAAAGGAAGTGTaGCCATCTAAGAAGAGGGGCACGATGCATGTGACG +
Preference number: 4 (lower is better)
Translates to: WSGKLFSGRKEV*PSKKRGTMHVT
Trigger: CGTCACATGCATCGTGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTACCTGAAAACAGCTTCCCTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000169775.8
3UTR CAA 72 bp ACTCATACACACTCCTTCTACATGTGGCTCGGGGCTTaGGTGGCTTGGATGAGATGTCTGTCTCTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: THTHSFYMWLGA*VAWMRCLSLVS
Trigger: ACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAGCCACATGTAGAAGGAGTGTGTATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
3UTR CAA 72 bp AGTAGAGGTCCATATATTTGGAGATCAGCTTTCACCTaGGGGAGCGGCATGGAAACCTTGGACCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGPYIWRSAFT*GSGMETLDQSR
Trigger: CCTGCTTTGGTCCAAGGTTTCCATGCCGCTCCCCAAGGTGAAAGCTGATCTCCAAATATATGGACCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATGGTCTGTTAGAGCCATaGACACCAATGAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHGLLEP*TPMSIA
Trigger: AGCTATGCTCATTGGTGTTCATGGCTCTAACAGACC...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGAGGCAGTGTCTCCTTaGCAATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: QTSSLALWDGSIVSTCRLEAVSP*QCWDVL
Trigger: CAACACATCCCAGCATTGTCAAGGAGACACTGCCTC...TAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATTTCCCTTTGTTTGCTTaGCAGAGATGCTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHFPLFA*QRCCSS
Trigger: GCTACTGCAGCATCTCTGTCAAGCAAACAAAGGGAA...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGTTCCTTCTCTGGCATTaGAGCCTGCACAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQFLLWH*SLHSQC
Trigger: GCATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAA...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGATACTTTTCTCAGAACTaGGGATTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPLADTASFRTSLFLSSRYFSQN*GFLLWH
Trigger: ATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTA...TCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR TCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCAATGAGTCGGTTCAGCTaGGGGATTTCCACATTTCGT +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAMSRFS*GISTFR
Trigger: ACGAAATGTGGAAATCCCTCAGCTGAACCGACTCAT...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp CGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTAATCCGGACAGCCATTaGGTAACTGGAGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RESPNIQGLFLKYKSQSLNPDSH*VTGAEV
Trigger: AACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATT...AAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGGCTAAGGCTCGGATaGCCTGAGATTTGTATGGCA +
Preference number: 4 (lower is better)
Translates to: MGRQTSSLALWDGSIVSTWLRLG*PEICMA
Trigger: TGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCA...AGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CCCAGGAGAGAGACTGTAATTGAGCTGAAGCTAAAGCTAGTGCTGTGCATTAAATTGTCCGACGCTGGTTaGTCTGGCTGTGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PRRETVIELKLKLVLCIKLSDAG*SGCACG
Trigger: TCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAA...TTTAATGCACAGCACTAGCTTTAGCTTCAGCTCAATTACAGTCTCTCTCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGTCTGACTCCCCTTTATaGAGCTCCTCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMSDSPL*SSSASL
Trigger: CAAGCTTGCTGAGGAGCTGCATAAAGGGGAGTCAGA...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp CAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTACTGCTGGCATTTTTCTaGCACCTGCTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: QTSSLALWDGSIVSTCRLLLAFF*HLLETL
Trigger: CAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCAG...TAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTTCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTSGIEA*TANANR
Trigger: CCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGTCTGGCATTGAAGCCTaGACAGCCAATGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: IVSTCRLDCQEGLGQDQGSGIEA*TANANR
Trigger: CCTGTTTGCATTGGCTGTGCAGGCTTCAATGCCAGA...CCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGTAGAAAGGAAGTGTTaGCATCTAAGAAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMVERKC*HLRRGA
Trigger: TGCCCCTCTTCTTAGATGGCAACACTTCCTTTCTAC...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CCCAGGAGAGAGACTGTAATTGAGCTGAAGCTAAAGCTAGTGCTGTGCATTAAACTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PRRETVIELKLKLVLCIKLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...TTTAATGCACAGCACTAGCTTTAGCTTCAGCTCAATTACAGTCTCTCTCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCAGATTTCCACATTTCGTaGCAGGGAGCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTADFHIS*QGADKS
Trigger: GCTTTTGTCTGCTCCCTGCCACGAAATGTGGAAATC...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTAGAGAAAGGACAGCTGTaGCCACAGCTCTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVEKGQL*PQLCFK
Trigger: TTTGAAGCAGAGCTGTGGCCACAGCTGTCCTTTCTC...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp AAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTTCTGTGAAGAACCGCTaGCGGAACATGATCCGAACA +
Preference number: 4 (lower is better)
Translates to: KSWLFKSFAQPCRRPSICSVKNR*RNMIRT
Trigger: TGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...ACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp ATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTCTGTGAAGAACCGCTaGCGGAACATGATCCGAACA +
Preference number: 4 (lower is better)
Translates to: MGRQTSSLALWDGSIVSTSVKNR*RNMIRT
Trigger: TGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...AGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTG +
Preference number: 4 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQAAWKP*TKAGTL
Trigger: CAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGC...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
3UTR CAA 72 bp ACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTaGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: TASMGRQTSSLA*WDGSIVSTCRL
Trigger: TAACCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACAGCATAGCTGGTCTTTaGAGCTACTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSIVSTCRLDCQEGLGQDSIAGL*SYSEAF
Trigger: AAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCT...GTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTGGTCTGTTAGAGCCATaGACACCAATGAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: KSWLFKSFAQPCRRPSICGLLEP*TPMSIA
Trigger: AGCTATGCTCATTGGTGTTCATGGCTCTAACAGACC...ACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGGTCTGTTAGAGCCATaGACACCAATGAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTGLLEP*TPMSIA
Trigger: AGCTATGCTCATTGGTGTTCATGGCTCTAACAGACC...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGATACTTTTCTCAGAACTaGGGATTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSFAQPCRRPSICTASMGYFSQN*GFLLWH
Trigger: ATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTA...TCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATACAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: TASMGRQTSSLALWDGSIQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...TATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TCTGTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTTGAAGCTACTCAGATGTAGTCCTTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: SVRAMNTNEHSWSLKLLRCSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAAGGACTACA...TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000168484.8
CDS-3UTR GCA 90 bp TGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCACAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: WLFKSFAQPCRRPSICTAQAFRV*RESSLA
Trigger: TGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTG...TGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTCCGGGCAGACGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: NIQGLFLKYKSQSLQQSIPGRRT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGG...AATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACTCAAGAACTCCTCCAACTGCTaGCCTGGAGGCTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRPIFCHLKTRCSVEKLKNSSNC*PGGCLL
Trigger: CAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTT...CTTGAGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp ATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAATGAGTCGGTTCAGCTaGGGGATTTCCACATTTCGT +
Preference number: 4 (lower is better)
Translates to: MLFSSVGVRLASKGISTRMSRFS*GISTFR
Trigger: ACGAAATGTGGAAATCCCTCAGCTGAACCGACTCAT...TCTTGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp AACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTACCGGACTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: NIQGLFLKYKSQSLQQSITGLHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT...AATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp ATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTCAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: MGRQTSSLALWDGSIVSTQAFRV*RESSLA
Trigger: TGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTG...AGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGCAAGCATTCAGAGTTTaGAGAGAATCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMQAFRV*RESSLA
Trigger: TGCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTG...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR GCA 90 bp TCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACTCAAGTGCAGACAGCGGAAATaGCGGGAACATTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRPIFCHLKTRCSVEKLKCRQRK*REHLVG
Trigger: TCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCA...CTTGAGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTGCTTCCAGCTCCAGGATACAGAGTaGCCAGGGTTCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: EFCNQSVNMKTHDLRCFQLQDTE*PGFLMP
Trigger: AGGCATCAGGAACCCTGGCCACTCTGTATCCTGGAG...CTGGAAGCACCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp CATGTCACTGCTACGTACAACTACAATTACAACTTACAGGCCCTAGACCAGGGTTCCCCATCCATCACCTaGATGAAGCCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: HVTATYNYNYNLQALDQGSPSIT*MKPNVK
Trigger: CTTCACATTTGGCTTCATCCAGGTGATGGATGGGGA...ACCCTGGTCTAGGGCCTGTAAGTTGTAATTGTAGTTGTACGTAGCAGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
CDS-3UTR CCA 90 bp CCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCTTGGAGATGAGGTCATaGACGATGCGGAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQHPRSFPQIQVSVSSTILEMRS*TMRKAS
Trigger: GCTGGCTTTCCGCATCGTCCATGACCTCATCTCCAA...GATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp AGGCACCTGCTGTTAAGCCTGATTAGCATTCAATCATaGGAAGCTACATGGTGGAAGGAGAGACTTCCACAG +
Preference number: 4 (lower is better)
Translates to: RHLLLSLISIQS*EATWWKERLPQ
Trigger: CTGTGGAAGTCTCTCCTTCCACCATGTAGCTTCCAATGATTGAATGCTAATCAGGCTTAACAGCAGGTGCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167927.8
CDS-3UTR TCA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATACTTTTCTCAGAACTaGGGATTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPAYFSQN*GFLLWH
Trigger: ATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTA...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp TTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGCAACATGAAGACTCATaGTTTGAGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FKSFAQPCRRPSICTASMQHEDS*FEVLPV
Trigger: TACTGGAAGCACCTCAAATCATGAGTCTTCATGTTG...CATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: GSIVSTCRLDCQEGLGQDTNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...GTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp CTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATAACCAATGAGCATAGCTaGTCTTTGAAGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: LFLTDTGEPQHPRSFPQITNEHS*SLKLLR
Trigger: TCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGT...TATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CCA 90 bp GAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTGCTTCCAGAGTTCAGGGCTCAGATaGGTAGTGGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: EFCNQSVNMKTHDLRCFQSSGLR*VVAVPM
Trigger: CATTGGCACTGCCACTACCCATCTGAGCCCTGAACT...CTGGAAGCACCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
3UTR CAA 72 bp CAACAATCCATTAGAAGTCATGGCTCTTTAAGAGTTTaGCACAGCCATGCAGGAGGCCCAGCATTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QQSIRSHGSLRV*HSHAGGPAFVL
Trigger: CAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAATGGATTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp GTTAGAGCCATGAACACCAATGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTTTCATCTCTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VRAMNTNEHSWS*KLLRGLSSLSS
Trigger: TGAAGACAGAGATGAAAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
CDS-3UTR CCA 90 bp AACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTGGGACCACAAGATGGTaGTCCTTCAGCCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NIQGLFLKYKSQSLQQSIGTTRW*SFSRFS
Trigger: TGAGAACCGGCTGAAGGACCACCATCTTGTGGTCCC...AATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp GAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGTGCTTCCAGATGAGTCGGTTCAGCTaGGGGATTTCCACATTTCGT +
Preference number: 4 (lower is better)
Translates to: EFCNQSVNMKTHDLRCFQMSRFS*GISTFR
Trigger: ACGAAATGTGGAAATCCCTCAGCTGAACCGACTCAT...CTGGAAGCACCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CCA 90 bp ACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTAGCGGCATGGAAACCTTaGACCAAAGCAGGCACATTG +
Preference number: 4 (lower is better)
Translates to: TSKVFSSNTSLSLFNNPLAAWKP*TKAGTL
Trigger: CAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGC...TAATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
3UTR CAA 72 bp AAAAGGTATGTCTTCTCAAGACAACTAGAGAAGAGCTaGTGGTTAGGCACTGTATGTGGAGTTCAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: KRYVFSRQLEKS*WLGTVCGVQAN
Trigger: GTTGGCTTGAACTCCACATACAGTGCCTAACCACAAGCTCTTCTCTAGTTGTCTTGAGAAGACATACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp CTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTaGAAACTCTGGCTTCTCAACGGGACAAAGACAGTA +
Preference number: 4 (lower is better)
Translates to: LSFTLGKDPSGM*KLWLLNGTKTV
Trigger: TACTGTCTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTGAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp AGAGATGAGAACTCTGTCTTTTTGTTTGATGTATGCTaGCTGCAGGGAAAATGGGAAGGACAACCAAGAACT +
Preference number: 4 (lower is better)
Translates to: RDENSVFLFDVC*LQGKWEGQPRT
Trigger: AGTTCTTGGTTGTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp CAGAATCAGATAGAGATGAGAACTCTGTCTTTTTGTTaGATGTATGCTTGCTGCAGGGAAAATGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QNQIEMRTLSFC*MYACCRENGKD
Trigger: GTCCTTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATCTGATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
3UTR CAA 72 bp CTGACAGAATCAGATAGAGATGAGAACTCTGTCTTTTaGTTTGATGTATGCTTGCTGCAGGGAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: LTESDRDENSVF*FDVCLLQGKWE
Trigger: TTCCCATTTTCCCTGCAGCAAGCATACATCAAACAAAAAGACAGAGTTCTCATCTCTATCTGATTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR TCA 90 bp AACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTTACTTTTCTCAGAACTaGGGATTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NIQGLFLKYKSQSLQQSIYFSQN*GFLLWH
Trigger: ATGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTA...AATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS TCA 90 bp CACTTCCTTCTCCGAGAGCAAGGAGTGACACTGGAGCAGCACCTGTaGCAGAAGCTGGGCTCCTCGAGCCCGAGTTCGGGGTTCAGCATT +
Preference number: 5 (lower is better)
Translates to: HFLLREQGVTLEQHL*QKLGSSSPSSGFSI
Trigger: AATGCTGAACCCCGAACTCGGGCTCGAGGAGCCCAGCTTCTGTCACAGGTGCTGCTCCAGTGTCACTCCTTGCTCTCGGAGAAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169765.2
ENSMUST00000169775.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGGATTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YQQEGEAPVTGQGQGEWGLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...TCCCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: GGPAFVLHPWEGRPVVLPPGGCL*RSPAKH
Trigger: GTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGG...AGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGACAGCCATAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: GEASESVHTLQSSNPDSHRGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...ATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp AGGCCAGGACCAAGGGCTCAGCTCCCCGGGCTCCCAAGTAGGAACCATTCTCCCCCATATTCCCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPGPRAQLPGLPSRNHSPPYSLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGG...GGGAGAATGGTTCCTACTTGGGAGCCCGGGGAGCTGAGCCCTTGGTCCTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKPGGCL*RSPAKH
Trigger: GTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGG...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLPGGCL*RSPAKH
Trigger: GTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGG...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCCTGGAGGCTGCTTGTaGAGGAGCCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SFAQPCRRPSICTASMGRPGGCL*RSPAKH
Trigger: GTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGG...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGTTGCTCTGGCTGTGCTaGTGGAACTGTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FAQPCRRPSICTASMGRQLLWLC*WNCSSS
Trigger: GCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAA...CTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGATTGTCCGACGCTGGTaGCTCTGGCTGTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SFAQPCRRPSICTASMGRIVRRW*LWLCLW
Trigger: CCACAAGCACAGCCAGAGCAACCAGCGTCGGACAAT...CCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: ALTLQQHSFLFLTDTGEPEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...GGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGAGTGGGGAAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: YQQEGEAPVTGQGQGEWGRGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...TCCCCACTCACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ACAGAAGTGGGGAGGCGAGTGAGAGCGTGCATACACTGCAGAGCAGCAATCCGGATTCCTTCTCTGGCATaGAAGCCTGCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: TEVGRRVRACIHCRAAIRIPSLA*KPAQPM
Trigger: CATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAAT...CCGGATTGCTGCTCTGCAGTGTATGCACGCTCTCACTCGCCTCCCCACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp ACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: TAMQEAQHLYCIHGKADQRGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...CTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: PSLTLLPFAQVSSCRPEASGMET*DQSRHI
Trigger: AATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCT...AGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp CCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGGTAAAAGCACAGGCTaGGGCAGCCTGTTGAGTACG +
Preference number: 5 (lower is better)
Translates to: PSICTASMGRQTSSLALWGKSTG*GSLLST
Trigger: CGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACC...CCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGGCTTGGCTAAGGCTCGGTAAAAGCACAGGCTaGGGCAGCCTGTTGAGTACG +
Preference number: 5 (lower is better)
Translates to: LLPFAQVSSCRPEAWLRLGKSTG*GSLLST
Trigger: CGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACC...GAGCCTTAGCCAAGCCTCTGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp CACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 5 (lower is better)
Translates to: HSFLFLTDTGEPQHPRSFLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...AAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 5 (lower is better)
Translates to: ICTASMGRQTSSLALWDGLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS CCA 90 bp TCTTCTCGTGATCGCATGAAGTTAGTGATGATGCTGAAGACAGTATaGCGGTCCACCTGTAGCAGGGACAGTGCCCTCAGGCCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: SSRDRMKLVMMLKTV*RSTCSRDSALRPCK
Trigger: CTTACAGGGCCTGAGGGCACTGTCCCTGCTACAGGTGGACCGCCATACTGTCTTCAGCATCATCACTAACTTCATGCGATCACGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169765.2
CDS-3UTR CAA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TCCACTGCACTGACCCTTCAGCAGCACAGCTTCCTATTCCTGACAGACACGGGAGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: STALTLQQHSFLFLTDTGGSFQG*SDAGCS
Trigger: AGAGCAACCAGCGTCGGACAATCCTTGAAATGATCC...TCCCGTGTCTGTCAGGAATAGGAAGCTGTGCTGCTGAAGGGTCAGTGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGAGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: LHSHAGGPAFVLHPWEGREHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...TCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCATTCCTTCTCTGGCATaGAAGCCTGCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: VLHSHAGGPAFVLHPWEGIPSLA*KPAQPM
Trigger: CATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAAT...GCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGTTGTCGTCCAGAGGCTaGGCTAAGGCTCGGATGACC +
Preference number: 5 (lower is better)
Translates to: RQTSSLALWDGSIVSTCRLSSRG*AKARMT
Trigger: GGTCATCCGAGCCTTAGCCAAGCCTCTGGACGACAA...CCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TACGAGGGTGAGCCAGGAAGCCCCGAGGATCCTCCCAAGAGATATAGTGTTCAAGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: YEGEPGSPEDPPKRYSVQASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...TTGAACACTATATCTCTTGGGAGGATCCTCGGGGCTTCCTGGCTCACCCTCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
CDS-3UTR CAA 90 bp GTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGTTAGCAAGGGAAGCACGTaGCTGGTGAGGTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: VCATTARQDEFQFWFCFVSKGST*LVRCSQ
Trigger: CTGTGAGCACCTCACCAGCAACGTGCTTCCCTTGCT...AACAAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTAATTGTCCGACGCTGGTaGCTCTGGCTGTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SHGSLRVLHSHAGGPAFVIVRRW*LWLCLW
Trigger: CCACAAGCACAGCCAGAGCAACCAGCGTCGGACAAT...TACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026168.9
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGGCAGACCCATATTCCCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 5 (lower is better)
Translates to: CTAMQEAQHLYCIHGKADPYSLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGG...GTCTGCCTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GCATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: AFVLHPWEGRPVVLPCGMTKAGT*SVKNRW
Trigger: CCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGT...CATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: ICTASMGRQTSSLALWDGTKAGT*SVKNRW
Trigger: CCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGT...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CACAGCTTCCTATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: HSFLFLTDTGEPQHPRSFTKAGT*SVKNRW
Trigger: CCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGT...AAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAATAGGAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTTGTACTGCATCCATGGGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: ICTASMGRQTSSLALWDGSGMET*DQSRHI
Trigger: AATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCT...GCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCCCATGGATGCAGTACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CTATCAATTTTGCATCTTAGTTCTGTGGCCCTGGCCCTGGGTGCCCTAACCATGGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSILHLSSVALALGALTMGSFQG*SDAGCS
Trigger: AGAGCAACCAGCGTCGGACAATCCTTGAAATGATCC...CATGGTTAGGGCACCCAGGGCCAGGGCCACAGAACTAAGATGCAAAATTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: KSFAQPCRRPSICTASMGEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...TCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTCTCCCCTCGCTGACACTGCTTCCTTTCGCACAAGTCTCTTCTTGTCGTCCAGAGCATAGCTGGTCTTaGAAGCTACTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: ILPSLTLLPFAQVSSCRPEHSWS*KLLRGL
Trigger: AAGGCCTCTGAGTAGCTTCAAAGACCAGCTATGCTC...TGGACGACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGCGAGGGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp CTATCAATTTTGCATCTTAGTTCTGTGGCCCTGGCCCTGGGTGCCCTAACCATGATTCCTTCTCTGGCATaGAAGCCTGCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: LSILHLSSVALALGALTMIPSLA*KPAQPM
Trigger: CATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAAT...CATGGTTAGGGCACCCAGGGCCAGGGCCACAGAACTAAGATGCAAAATTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTAGAAGTCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCAGGTAAAAGCACAGGCTaGGGCAGCCTGTTGAGTACG +
Preference number: 5 (lower is better)
Translates to: IRSHGSLRVLHSHAGGPAGKSTG*GSLLST
Trigger: CGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACC...TGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGACTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS TCA 90 bp AATGTGTGGGCAGCTCTGGTAAAAGCACAGGCTTGGGCAGCCTGTTaGGTACGTGAGACAGACCCTTCAGATAGTTTGGCTTCACATCTT +
Preference number: 5 (lower is better)
Translates to: NVWAALVKAQAWAAC*VRETDPSDSLASHL
Trigger: AAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACCAGAGCTGCCCACACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp CAGGTGTGTGCCACCACTGCCCGGCAAGACGAGTTTCAATTCTGGTTTTGTTTTGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: QVCATTARQDEFQFWFCFASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...AAAACAAAACCAGAATTGAAACTCGTCTTGCCGGGCAGTGGTGGCACACACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATCCATGGGAAGCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: EFCTAMQEAQHLYCIHGKQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...CTTCCCATGGATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: IVSTCRLDCQEGLGQDQGSGMET*DQSRHI
Trigger: AATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCT...CCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: IVSTCRLDCQEGLGQDQGGSFQG*SDAGCS
Trigger: AGAGCAACCAGCGTCGGACAATCCTTGAAATGATCC...CCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATTCCTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGAGGCAGTGTCTCCTaGACAATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: IPDRHGRAPTSKVFSSNTRGSVS*TMLGCV
Trigger: AACACATCCCAGCATTGTCAAGGAGACACTGCCTCT...TGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGCCATATTCCCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 5 (lower is better)
Translates to: TSIERHINKKERRRLQAKPYSLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGG...CTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATGCCTTTCGATGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TCATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTATTCCTTCTCTGGCATaGAAGCCTGCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: SWLFKSFAQPCRRPSICTIPSLA*KPAQPM
Trigger: CATTGGCTGTGCAGGCTTCAATGCCAGAGAAGGAAT...AGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGACCAAAGCAGGCACATaGTCTGTGAAGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQTKAGT*SVKNRW
Trigger: CCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGT...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GGAAGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 5 (lower is better)
Translates to: GRQTSSLALWDGSIVSTCCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...GCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CATGGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 5 (lower is better)
Translates to: HGSLRVLHSHAGGPAFVLCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...CAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GGCTCTTTAAGAGTTTTGCACAGCCATGCAGGAGGCCCAGCATTTGTACTGCATTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 5 (lower is better)
Translates to: GSLRVLHSHAGGPAFVLHCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...ATGCAGTACAAATGCTGGGCCTCCTGCATGGCTGTGCAAAACTCTTAAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: DGSIVSTCRLDCQEGLGQASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...CTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: MLFSSVGVRLASKGISTRASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...TCTTGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp CTGACAGACACGGGAGAGCCCCAACATCCAAGGTCTTTTCCTCAAATACAAGTCCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LTDTGEPQHPRSFPQIQVQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...GACTTGTATTTGAGGAAAAGACCTTGGATGTTGGGGCTCTCCCGTGTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AGGCAGACCAGTAGTCTTGCCTTGTGGGATGGCTCAATAGTTAGTACTTGCAGGCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: RQTSSLALWDGSIVSTCRQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...CCTGCAAGTACTAACTATTGAGCCATCCCACAAGGCAAGACTACTGGTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCCAGGACCAAGGGCCATATTCCCTTTGTTaGCTTGACAGAGATGCTGCA +
Preference number: 5 (lower is better)
Translates to: IVSTCRLDCQEGLGQDQGPYSLC*LDRDAA
Trigger: TGCAGCATCTCTGTCAAGCAAACAAAGGGAATATGG...CCCTTGGTCCTGGCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000166090.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACTCAAGAGCGGCATGGAAACCTaGGACCAAAGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: SRPIFCHLKTRCSVEKLKSGMET*DQSRHI
Trigger: AATGTGCCTGCTTTGGTCCAAGGTTTCCATGCCGCT...CTTGAGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp TGGGATGGCTCAATAGTTAGTACTTGCAGGTTAGATTGTCAGGAGGGTTTAGGCTGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 5 (lower is better)
Translates to: WDGSIVSTCRLDCQEGLGCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...GCCTAAACCCTCCTGACAATCTAACCTGCAAGTACTAACTATTGAGCCATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026168.9
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp ACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTAGGTAAAAGCACAGGCTaGGGCAGCCTGTTGAGTACG +
Preference number: 5 (lower is better)
Translates to: TSKVFSSNTSLSLFNNPLGKSTG*GSLLST
Trigger: CGTACTCAACAGGCTGCCCAAGCCTGTGCTTTTACC...TAATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163287.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp AACATCCAAGGTCTTTTCCTCAAATACAAGTCTCAGTCTCTTCAACAATCCATTGCAAGCATTCAGAGTTaGCAGAGAATCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: NIQGLFLKYKSQSLQQSIASIQS*QRIQLG
Trigger: GCCAAGCTGGATTCTCTGCAAACTCTGAATGCTTGC...AATGGATTGTTGAAGAGACTGAGACTTGTATTTGAGGAAAAGACCTTGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000163287.8
ENSMUST00000167927.8
ENSMUST00000171561.8
CDS-3UTR CAA 90 bp GAGGTTCAGGAATTTTGTAACCAGAGTGTCAACATGAAGACTCATGATTTGAGGCAATGCTGGGATGTGTaGAAACAGCTGACAAAGCTT +
Preference number: 5 (lower is better)
Translates to: EVQEFCNQSVNMKTHDLRQCWDV*KQLTKL
Trigger: AAGCTTTGTCAGCTGTTTCAACACATCCCAGCATTG...CCTCAAATCATGAGTCTTCATGTTGACACTCTGGTTACAAAATTCCTGAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166090.8
CDS-3UTR CAA 90 bp TCACTAGATATTGGTTTTAAAGAGCTTACCATGTCACTGCTACGTACAACTACATGCAGAGAATCCAGCTaGGCACTTAAAATCTCCGAA +
Preference number: 5 (lower is better)
Translates to: SLDIGFKELTMSLLRTTTCRESS*ALKISE
Trigger: TTCGGAGATTTTAAGTGCCAAGCTGGATTCTCTGCA...TGTAGTTGTACGTAGCAGTGACATGGTAAGCTCTTTAAAACCAATATCTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168484.8
CDS CAA 90 bp AGCCACCTGGTCAGCGGGCCCCTCCTGTTGACCCATGACGAAGTCTaGCACGAGGCCACACAGGGCGCCCATAGGCGCCACTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SHLVSGPLLLTHDEV*HEATQGAHRRHCLL
Trigger: GAGGAGGCAGTGGCGCCTATGGGCGCCCTGTGTGGCCTCGTGCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGCTGACCAGGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
ENSMUST00000171561.8
CDS TCA 72 bp CAGCCACCTGGTCAGCGGGCCCCTCCTGTTGACCCATaGCGAAGTCTTGCACGAGGCCACACAGGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: QPPGQRAPPVDP*RSLARGHTGRP
Trigger: TGGGCGCCCTGTGTGGCCTCGTGCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGCTGACCAGGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
ENSMUST00000171561.8
CDS CAA 72 bp GTCAGCGGGCCCCTCCTGTTGACCCATGACGAAGTCTaGCACGAGGCCACACAGGGCGCCCATAGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: VSGPLLLTHDEV*HEATQGAHRRH
Trigger: GTGGCGCCTATGGGCGCCCTGTGTGGCCTCGTGCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000026168.9
ENSMUST00000163398.8
ENSMUST00000164776.8
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
ENSMUST00000171561.8
CDS CAA 90 bp ACCGGACTTCACATCTGCAGCCACCTGGTCAGCGGGCCCCTCCTGTaGACCCATGACGAAGTCTTGCACGAGGCCACACAGGGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: TGLHICSHLVSGPLL*THDEVLHEATQGAH
Trigger: ATGGGCGCCCTGTGTGGCCTCGTGCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGATGTGAAGTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026168.9
ENSMUST00000167927.8
ENSMUST00000168484.8
ENSMUST00000169775.8
ENSMUST00000171561.8
CDS CAA 90 bp TTTCCAGAGAGGACCTGCAGCCACCTGGTCAGCGGGCCCCTCCTGTaGACCCATGACGAAGTCTTGCACGAGGCCACACAGGGCGCCCAT +
Preference number: 6 (lower is better)
Translates to: FPERTCSHLVSGPLL*THDEVLHEATQGAH
Trigger: ATGGGCGCCCTGTGTGGCCTCGTGCAAGACTTCGTCATGGGTCAACAGGAGGGGCCCGCTGACCAGGTGGCTGCAGGTCCTCTCTGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163398.8
ENSMUST00000164776.8
CDS CCA 72 bp GATCGCATGAAGTTAGTGATGATGCTGAAGACAGTATaGCGGTCCACCTGTAGCAGGGACAGTGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: DRMKLVMMLKTV*RSTCSRDSALR
Trigger: CCTGAGGGCACTGTCCCTGCTACAGGTGGACCGCCATACTGTCTTCAGCATCATCACTAACTTCATGCGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169765.2
CDS CAA 90 bp TCCATTTCTGCTGTAGCTTTAGGAATCCCAGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCTCTCTACGGATGGAAGCCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SISAVALGIPGSFQG*SDAGCSLYGWKPKG
Trigger: GCCTTTGGGCTTCCATCCGTAGAGAGAGCAACCAGCGTCGGACAATCCTTGAAATGATCCTGGGATTCCTAAAGCTACAGCAGAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163287.8
CDS TCA 72 bp CGGGGATCCTTCTCCCCATCCATCACCTTCTTCTCGTaGTCGCATGAAGTTAGTGATGATGCTGAAGACAGT +
Preference number: 6 (lower is better)
Translates to: RGSFSPSITFFS*SHEVSDDAEDS
Trigger: ACTGTCTTCAGCATCATCACTAACTTCATGCGATCACGAGAAGAAGGTGATGGATGGGGAGAAGGATCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169775.8
CDS CAA 72 bp GCTGTAGCTTTAGGAATCCCAGGATCATTTCAAGGATaGTCCGACGCTGGTTGCTCTCTCTACGGATGGAAG +
Preference number: 6 (lower is better)
Translates to: AVALGIPGSFQG*SDAGCSLYGWK
Trigger: CTTCCATCCGTAGAGAGAGCAACCAGCGTCGGACAATCCTTGAAATGATCCTGGGATTCCTAAAGCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163287.8