Pregenerated sensors for MMRN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054641Ensembl transcript IDs: ENSMUST00000129603.4, ENSMUST00000204333.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGCTGGAGTAGAGAGGTaGGAGTCTACCTCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAAGVER*ESTSHT Trigger: TGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGC...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGCTGGAGTAGAGAGGTaGGAGTCTACCTCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: NGHIGFLCLCVSLGERTPAGVER*ESTSHT Trigger: TGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAAGGAGAGCATGCTaGAGTAGAGAGGTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FLWEICCDILFYTGKTHRKRRAC*SREVRV Trigger: GACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTT...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAAAAGGAGAGCATGCTaGAGTAGAGAGGTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KFLWEICCDILFYTGKTHKRRAC*SREVRV Trigger: GACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTT...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACGCATGTAAGGATAAATaGAAAGGAGAGCATGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KFLWEICCDILFYTGKTHACKDK*KGEHAG Trigger: TCCAGCATGCTCTCCTTTTCATTTATCCTTACATGC...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| 3UTR GCA 72 bp | CACATGCTTGTGGGTAATGGTCACATTGGGTTTCTATaGCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: HMLVGNGHIGFL*LCVSLGERTPS Trigger: AGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATTACCCACAAGCATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCCTGCAGGACCCTGAGTaGAGGGGTTCTGAGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPLQDPE*RGSEWP Trigger: CGGCCACTCAGAACCCCTCCACTCAGGGTCCTGCAG...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTCTGGCACGGGAAGCTaGTGCAGCTGGAATGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGSGTGS*CSWNVP Trigger: AGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCAGGATAGGACCAGGTaGCGTCATTCCGTGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGQDRTR*RHSVSV Trigger: CACACTCACGGAATGACGGCACCTGGTCCTATCCTG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCAGATCTCTCAGCAGCTaGAGGACCCTGAGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPRSLSS*RTLSGG Trigger: CCCTCCACTCAGGGTCCTGCAGCTGCTGAGAGATCT...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTATCACCCATGAACGGGTaGCGGCAAGCGCAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVSPMNG*RQAQMK Trigger: CTTCATCTGCGCTTGCCGGCACCCGTTCATGGGTGA...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTCTTGCTTCTGCTGCTaGGCTCTTCCTTGGTCAACA | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGSCFCC*ALPWST Trigger: TGTTGACCAAGGAAGAGCTCAGCAGCAGAAGCAAGA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTTGCTTCCAGTTCCTTaGCAGGCTTCTCACAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGLLPVP*QASHRS Trigger: TGACCTGTGAGAAGCCTGTCAAGGAACTGGAAGCAA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGTCTGAGAACTCTGACTaGCTGGCAGTGAGCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPASENSD*LAVSLW Trigger: CCAAAGGCTCACTGCCAGGCAGTCAGAGTTCTCAGA...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGTTCTCTAGGGATGTTTaGCTTCTCCCGTCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAFSRDV*LLPSGG Trigger: CCCTCCTGACGGGAGAAGCCAAACATCCCTAGAGAA...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTGTTCTTTAGATCTGTaGTGTCCTTCCACGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGCSLDL*CPSTWA Trigger: AGCCCACGTGGAAGGACATCACAGATCTAAAGAACA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTGCATCAGACCTTGCTTaGTTGCTGTCTCCTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGASDLA*LLSPVV Trigger: TACTACAGGAGACAGCAAGCAAGCAAGGTCTGATGC...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGAGCAGCATCAGACCTTaGTTGCTTGCTGTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPASSIRP*LLAVSC Trigger: ACAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCT...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGGAAGCTGCTGCAGCTaGAATGTTCCTGTGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPGSCCS*NVPVLQ Trigger: CTGTAGCACAGGAACATTCCAGCTGCAGCAGCTTCC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
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| CDS-3UTR TCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTGTTGTCACTTCTCCTaGGGTGTGTTTCCCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPCCHFS*GVFPLQ Trigger: CTGCAAGGGAAACACACCTCAGGAGAAGTGACAACA...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGTCCTTCCACGTGGGCTaGTTTTCTTGCATGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPASFHVG*FSCMKA Trigger: TGCTTTCATGCAAGAAAATCAGCCCACGTGGAAGGA...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTTTGCTTCCAGTTCCTTaGCAGGCTTCTCACAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCLLPVP*QASHRS Trigger: TGACCTGTGAGAAGCCTGTCAAGGAACTGGAAGCAA...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCAGATCTCTCAGCAGCTaGAGGACCCTGAGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGRSLSS*RTLSGG Trigger: CCCTCCACTCAGGGTCCTGCAGCTGCTGAGAGATCT...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAGAGGTGTGTTTCCCTTaGAGACCTGTTTCCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVEVCFP*RPVSHV Trigger: GACATGGGAAACAGGTCTGCAAGGGAAACACACCTC...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGAGGTGTGTTTCCCTTaGAGACCTGTTTCCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPEVCFP*RPVSHV Trigger: GACATGGGAAACAGGTCTGCAAGGGAAACACACCTC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTAGAACAATCTGTGAGTaGTCCTGTCTTAGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGRTICE*SCLSAP Trigger: AGGAGCACTAAGACAGGAGCACTCACAGATTGTTCT...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAGCAGCATCAGACCTTaGTTGCTTGCTGTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCSSIRP*LLAVSC Trigger: ACAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCT...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTTGCTCTCTTGGACATaGAAATCACTGAGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGLLSWT*KSLSIC Trigger: GCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCTGATCTTGCTCTCTTaGACATGCAAATCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGLILLS*TCKSLS Trigger: GCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTCTTCCACTTGGTAAATaGGAGCCAGTGTCCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCLPLGK*EPVSSI Trigger: GATACTGGACACTGGCTCTCATTTACCAAGTGGAAG...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTACTTCCACTTGGTAAATaGGAGCCAGTGTCCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVLPLGK*EPVSSI Trigger: GATACTGGACACTGGCTCTCATTTACCAAGTGGAAG...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTGCTGTTCTTCCACTTTaGGCTGACAGTTTGGACCTA | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCAVLPL*ADSLDL Trigger: TAGGTCCAAACTGTCAGCTCAAAGTGGAAGAACAGC...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCGGAGATATGAGCACTaGATGACTCAATGGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGRRYEH*MTQWCI Trigger: AATACACCATTGAGTCATTCAGTGCTCATATCTCCG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTTTACTGTGTGCCAGCTaGTGCTGTTCTTCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCLLCAS*CCSSTL Trigger: CAAAGTGGAAGAACAGCAGCAGCTGGCACACAGTAA...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTTTGGCTCAGCTGCTCTaGCAGTTTTTGAATCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCLAQLL*QFLNHG Trigger: GCCATGATTCAAAAACTGGCAGAGCAGCTGAGCCAA...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGTCAAGGCCATTTCCTaGCTGATGTTCATGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPVKAIS*LMFMML Trigger: CAGCATCATGAACATCAGGCAGGAAATGGCCTTGAC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAGCTTCACCACGGCTCTaGACTTCATTTCTCAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVASPRL*TSFLSK Trigger: CTTACTGAGAAATGAAGTGCAGAGCCGTGGTGAAGC...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAGCATTGGATGTCTTCTaGGATCTTCTGGAACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVALDVF*DLLEQS Trigger: ACTCTGTTCCAGAAGATCTCAGAAGACATCCAATGC...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGCATTGGATGTCTTCTaGGATCTTCTGGAACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPALDVF*DLLEQS Trigger: ACTCTGTTCCAGAAGATCTCAGAAGACATCCAATGC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGCTGATTTTCTTGCATaGAAGCAAAGTCTTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAADFLA*KQSLSG Trigger: CCCAGAAAGACTTTGCTTTCATGCAAGAAAATCAGC...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGCGGAGATATGAGCACTaGATGACTCAATGGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPARRYEH*MTQWCI Trigger: AATACACCATTGAGTCATTCAGTGCTCATATCTCCG...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCAGCCTGGTTACTGTGTaGCAGCTGCTGCTGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGSLVTV*QLLLFF Trigger: GAAGAACAGCAGCAGCTGGCACACAGTAACCAGGCT...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCATTCCTCATGTCATCTaGCACCAGAGAAGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPIPHVI*HQRSIV Trigger: GACAATGCTTCTCTGGTGGCAGATGACATGAGGAAT...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGCAAATGAGCTTGTTTTaGTTCCAGTTCCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAQMSLF*FQFLDR Trigger: CCTGTCAAGGAACTGGAAGCAAAACAAGCTCATTTG...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAAGAACAATCTGTGAGTaGTCCTGTCTTAGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVRTICE*SCLSAP Trigger: AGGAGCACTAAGACAGGAGCACTCACAGATTGTTCT...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATCTGCAGGACCCTGAGTaGAGGGGTTCTGAGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHLQDPE*RGSEWP Trigger: CGGCCACTCAGAACCCCTCCACTCAGGGTCCTGCAG...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTTCTCTAGGGATGTTTaGCTTCTCCCGTCAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGFSRDV*LLPSGG Trigger: CCCTCCTGACGGGAGAAGCCAAACATCCCTAGAGAA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTGTTTCATTGAGGGATTaGTGGTACAGAACAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGVSLRD*WYRTIC Trigger: ACAGATTGTTCTGTACCACCAATCCCTCAATGAAAC...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCAACTGTGGCTTCCTTTaGCTTGTGTATAACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPNCGFL*LVYNLV Trigger: CACCAGGTTATACACAAGCCAAAGGAAGCCACAGTT...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTGGCCTATCAGAATGGTaGTCATGTTCACCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCGLSEW*SCSPFS Trigger: AGAAAACGGTGAACATGACCACCATTCTGATAGGCC...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTATACACTCCAAGGTATaGAATTCTGAACTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGIHSKV*NSELAS Trigger: ACTGGCAAGTTCAGAATTCCATACCTTGGAGTGTAT...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCGGAAGCTGCTGCAGCTaGAATGTTCCTGTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGGSCCS*NVPVQD Trigger: ATCCTGCACAGGAACATTCCAGCTGCAGCAGCTTCC...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTGGAGACTTCTTGTTaGTCAGACTTTCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAVETSC*SDFLEK Trigger: TTTTTCCAGAAAGTCTGATCAACAAGAAGTCTCCAC...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTCTTGCTTCTGCTGCTaGGCTCTTCCTTGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGSCFCC*ALPWST Trigger: TGTTGACCAAGGAAGAGCTCAGCAGCAGAAGCAAGA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTACCTCAGACAGTGTTTaGTTTAACACATGCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGTSDSV*FNTCRF Trigger: AAATCTGCATGTGTTAAATCAAACACTGTCTGAGGT...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAATGCTCCAGCAAAGGCTaGAGGATCTCCATGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKCSSKG*RISMSY Trigger: ATATGACATGGAGATCCTTCAGCCTTTGCTGGAGCA...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTGATATGAGCACTGAATaGCTCAATGGTGTATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILHWKDSQERSTGRHARGDMSTE*LNGVFE Trigger: TTCAAATACACCATTGAGTCATTCAGTGCTCATATC...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAAGTCAAGGCCATTTCCTaGCTGATGTTCATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKVKAIS*LMFMML Trigger: CAGCATCATGAACATCAGGCAGGAAATGGCCTTGAC...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGAAGATGGATGGACTTTaGTTCCAGTGCCTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAKMDGL*FQCLKS Trigger: AGATTTAAGGCACTGGAAGCAAAGTCCATCCATCTT...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCATTGAGGGATTGGTaGTACAGAACAATCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPSLRDW*YRTICE Trigger: CTCACAGATTGTTCTGTACCACCAATCCCTCAATGA...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAATCACGGAAAGATGGATaGACTTTGCTTCCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKSRKDG*TLLPVP Trigger: AGGCACTGGAAGCAAAGTCCATCCATCTTTCCGTGA...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAAACTCACGGAAAGATaGATGGACTTTGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCKLTER*MDFASS Trigger: ACTGGAAGCAAAGTCCATCCATCTTTCCGTGAGTTT...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTATTTCTGGAAAAACTCTaGAGGAATTTCAACGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVFLEKL*RNFNVA Trigger: TGCCACGTTGAAATTCCTTCAGAGTTTTTCCAGAAA...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTGTTCTTTAGATCTGTaGTGTCCTTCCACGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGCSLDL*CPSTWA Trigger: AGCCCACGTGGAAGGACATCACAGATCTAAAGAACA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTTTAGTACCTTCAGCTaGAGATCAACATCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPFSTFS*RSTSLS Trigger: TGAGAGAGATGTTGATCTTCAGCTGAAGGTACTAAA...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATGGTCCACCTGGGTATaGGTGCATTCTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGWSTWV*VHSVHR Trigger: CCTGTGGACAGAATGCACTCATACCCAGGTGGACCA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAAGATTGAAATTGCCTaGTGTTGTCCTCTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCKIEIA*CCPLQL Trigger: AAGTTGGAGAGGACAACAGCAGGCAATTTCAATCTT...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAAAGATGGATGGACTTTaGTTCCAGTGCCTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVKMDGL*FQCLKS Trigger: AGATTTAAGGCACTGGAAGCAAAGTCCATCCATCTT...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTCACCCATGAACGGGTaGCGGCAAGCGCAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHSPMNG*RQAQMK Trigger: CTTCATCTGCGCTTGCCGGCACCCGTTCATGGGTGA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGAAAGCAAAGTCTTTCTaGGCTGTTGATGAAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAKAKSF*AVDETK Trigger: CTTTGTTTCATCAACAGCCCAGAAAGACTTTGCTTT...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCCTTTGGAAAAATCTaGTGCTACTGCATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPSFGKI*CYCIIF Trigger: GAAGATGATGCAGTAGCACCAGATTTTTCCAAAGGA...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTGGTCCACCTGGGTATaGGTGCATTCTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHWSTWV*VHSVHR Trigger: CCTGTGGACAGAATGCACTCATACCCAGGTGGACCA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAATCTGCTTTTGAGGCTTaGCAATATTTGCCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKSAFEA*QYLPEC Trigger: ACACTCTGGCAAATATTGTCAAGCCTCAAAAGCAGA...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAGCCTGGTTACTGTGTaGCAGCTGCTGCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGSLVTV*QLLLFF Trigger: GAAGAACAGCAGCAGCTGGCACACAGTAACCAGGCT...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTCTGTTTCTAAGGCATaGTCACTGATGCGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGSVSKA*SLMRLS Trigger: TGAGAGACGCATCAGTGAGCATGCCTTAGAAACAGA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTCTGGCACGGGAAGCTaGTGCAGCTGGAATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHSGTGS*CSWNVP Trigger: AGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTTTGGAAAAATCTGGTaGTACTGCATCATCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGHIGFLCLCVSLGERTPFGKIW*YCIIFL Trigger: AAGGAAGATGATGCAGTAGCACCAGATTTTTCCAAA...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATCAGGATAGGACCAGGTaGCGTCATTCCGTGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHQDRTR*RHSVSV Trigger: CACACTCACGGAATGACGGCACCTGGTCCTATCCTG...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTAAAAGCAAAGTCTTTCTaGGCTGTTGATGAAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIGFLCLCVSLGERTPSVKAKSF*AVDETK Trigger: CTTTGTTTCATCAACAGCCCAGAAAGACTTTGCTTT...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTCTGAGAACTCTGACTaGCTGGCAGTGAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHSENSD*LAVSLW Trigger: CCAAAGGCTCACTGCCAGGCAGTCAGAGTTCTCAGA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGAGTAGAACTGCCTGCCTaGTACTTTCCAAGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGVELPA*YFPSPL Trigger: CAGAGGACTTGGAAAGTACCAGGCAGGCAGTTCTAC...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTTTCTGGAAAAACTCTaGAGGAATTTCAACGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGFLEKL*RNFNVA Trigger: TGCCACGTTGAAATTCCTTCAGAGTTTTTCCAGAAA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATCCTTCCACGTGGGCTaGTTTTCTTGCATGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGSFHVG*FSCMKA Trigger: TGCTTTCATGCAAGAAAATCAGCCCACGTGGAAGGA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAAGATATGAGCACTGAATaGCTCAATGGTGTATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKDMSTE*LNGVFE Trigger: TTCAAATACACCATTGAGTCATTCAGTGCTCATATC...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGGCATCAGACCTTGCTTaGTTGCTGTCTCCTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRASDLA*LLSPVV Trigger: TACTACAGGAGACAGCAAGCAAGCAAGGTCTGATGC...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGGCTTCACCACGGCTCTaGACTTCATTTCTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRASPRL*TSFLSK Trigger: CTTACTGAGAAATGAAGTGCAGAGCCGTGGTGAAGC...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATCACGGAAAGATGGATaGACTTTGCTTCCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGSRKDG*TLLPVP Trigger: AGGCACTGGAAGCAAAGTCCATCCATCTTTCCGTGA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAAATCTGTAAGATCCTTTaGAAAAATCTGGTGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKICKIL*KNLVLL Trigger: CAGTAGCACCAGATTTTTCCAAAGGATCTTACAGAT...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACGCTGTTCTTCCACTTTaGGCTGACAGTTTGGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHAVLPL*ADSLDL Trigger: TAGGTCCAAACTGTCAGCTCAAAGTGGAAGAACAGC...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTGCTCCAGCAAAGGCTaGAGGATCTCCATGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHCSSKG*RISMSY Trigger: ATATGACATGGAGATCCTTCAGCCTTTGCTGGAGCA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACTTGGCTCAGCTGCTCTaGCAGTTTTTGAATCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHLAQLL*QFLNHG Trigger: GCCATGATTCAAAAACTGGCAGAGCAGCTGAGCCAA...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGTTGCTCTCTTGGACATaGAAATCACTGAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRLLSWT*KSLSIC Trigger: GCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAA...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGTCTGTTTCTAAGGCATaGTCACTGATGCGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRSVSKA*SLMRLS Trigger: TGAGAGACGCATCAGTGAGCATGCCTTAGAAACAGA...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTTTGGAAAAATCTGGTaGTACTGCATCATCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CDILFYTGKTHRKGAQVGFGKIW*YCIIFL Trigger: AAGGAAGATGATGCAGTAGCACCAGATTTTTCCAAA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGCTGATCTTGCTCTCTTaGACATGCAAATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRLILLS*TCKSLS Trigger: GCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAG...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGAACTGTGGCTTCCTTTaGCTTGTGTATAACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRNCGFL*LVYNLV Trigger: CACCAGGTTATACACAAGCCAAAGGAAGCCACAGTT...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAAGAGTTTCAAACTCTTTaGCAGTCTTTGTTACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MKRRACWSREVRVYLSHKEFQTL*QSLLLK Trigger: TTTCAGTAACAAAGACTGCCAAAGAGTTTGAAACTC...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGGGCCTATCAGAATGGTaGTCATGTTCACCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRGLSEW*SCSPFS Trigger: AGAAAACGGTGAACATGACCACCATTCTGATAGGCC...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGACAAATGAGCTTGTTTTaGTTCCAGTTCCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGQMSLF*FQFLDR Trigger: CCTGTCAAGGAACTGGAAGCAAAACAAGCTCATTTG...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGAGCTGGAATGTTCCTGTaGTACAGGATGTATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGAGMFL*YRMYNG Trigger: ACCATTATACATCCTGTAGCACAGGAACATTCCAGC...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATCATTGAGGGATTGGTaGTACAGAACAATCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGSLRDW*YRTICE Trigger: CTCACAGATTGTTCTGTACCACCAATCCCTCAATGA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATGCTGATTTTCTTGCATaGAAGCAAAGTCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHADFLA*KQSLSG Trigger: CCCAGAAAGACTTTGCTTTCATGCAAGAAAATCAGC...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGTTTAGTACCTTCAGCTaGAGATCAACATCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRFSTFS*RSTSLS Trigger: TGAGAGAGATGTTGATCTTCAGCTGAAGGTACTAAA...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATTCTGCTTTTGAGGCTTaGCAATATTTGCCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHSAFEA*QYLPEC Trigger: ACACTCTGGCAAATATTGTCAAGCCTCAAAAGCAGA...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATCCTTTGGAAAAATCTaGTGCTACTGCATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFGKSAVTFYSTLERLTGSFGKI*CYCIIF Trigger: GAAGATGATGCAGTAGCACCAGATTTTTCCAAAGGA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACGTGGAGACTTCTTGTTaGTCAGACTTTCTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHVETSC*SDFLEK Trigger: TTTTTCCAGAAAGTCTGATCAACAAGAAGTCTCCAC...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATAAGATTGAAATTGCCTaGTGTTGTCCTCTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHKIEIA*CCPLQL Trigger: AAGTTGGAGAGGACAACAGCAGGCAATTTCAATCTT...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATGTCAAATCATTCAGCTaGTCACTCATTTTATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHVKSFS*SLILST Trigger: GGTGGATAAAATGAGTGAGCAGCTGAATGATTTGAC...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACGTTTCATTGAGGGATTaGTGGTACAGAACAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHVSLRD*WYRTIC Trigger: ACAGATTGTTCTGTACCACCAATCCCTCAATGAAAC...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATCTGTAAGATCCTTTaGAAAAATCTGGTGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWEICCDILFYTGKTHRICKIL*KNLVLL Trigger: CAGTAGCACCAGATTTTTCCAAAGGATCTTACAGAT...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATATACACTCCAAGGTATaGAATTCTGAACTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGREVAHTKLDVKCLNRHIHSKV*NSELAS Trigger: ACTGGCAAGTTCAGAATTCCATACCTTGGAGTGTAT...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACACCTCAGACAGTGTTTaGTTTAACACATGCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHTSDSV*FNTCRF Trigger: AAATCTGCATGTGTTAAATCAAACACTGTCTGAGGT...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACGAGTTTCAAACTCTTTaGCAGTCTTTGTTACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFLWEICCDILFYTGKTHEFQTL*QSLLLK Trigger: TTTCAGTAACAAAGACTGCCAAAGAGTTTGAAACTC...GTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | AGAGGCAGGGATACCACTGCTGTCCCTGTCTTCTCTAGGGATGTTTaGCTTCTCCCGTCAGGAGGGGTGCTTGTCTCAGAGGGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGRDTTAVPVFSRDV*LLPSGGVLVSEGCD Trigger: ATCACAGCCCTCTGAGACAAGCACCCCTCCTGACGGGAGAAGCCAAACATCCCTAGAGAAGACAGGGACAGCAGTGGTATCCCTGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | GCGCAGATGAAGTTGGATCTCCCGCTGATGCATGTGCCACCATTCTaGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTGCTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQMKLDLPLMHVPPF*HGKLLQLECSCATG Trigger: TCCTGTAGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGAATGGTGGCACATGCATCAGCGGGAGATCCAACTTCATCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
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| CDS CCA 90 bp | GCGCAGATGAAGTTGGATCTCCCGCTGATGCATGTGCCACCATTCTaGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTGCAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: AQMKLDLPLMHVPPF*HGKLLQLECSCAGC Trigger: ACATCCTGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGAATGGTGGCACATGCATCAGCGGGAGATCCAACTTCATCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204333.2 |
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| CDS GCA 90 bp | TCATCTTCCTTGATCTTCACGGTGCAAGTGTCACCCATGAACGGGTaGCGGCAAGCGCAGATGAAGTTGGATCTCCCGCTGATGCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLIFTVQVSPMNG*RQAQMKLDLPLMHV Trigger: CACATGCATCAGCGGGAGATCCAACTTCATCTGCGCTTGCCGGCACCCGTTCATGGGTGACACTTGCACCGTGAAGATCAAGGAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | GAACATCGTCTTCAGAAGATCTCTCAGCAGCTGCAGGACCCTGAGTaGAGGGGTTCTGAGTGGCCGAGAGCACTTGGAGGCTCAGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: EHRLQKISQQLQDPE*RGSEWPRALGGSVF Trigger: AAATACTGAGCCTCCAAGTGCTCTCGGCCACTCAGAACCCCTCCACTCAGGGTCCTGCAGCTGCTGAGAGATCTTCTGAAGACGATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | CCTCTCCTGTTGGCTCAGCTGCTCTGCCAGTTTTTGAATCATGGCTaGGTCACCACAGTCTTGCTTCTGCTGCTGAGCTCTTCCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLLAQLLCQFLNHG*VTTVLLLLLSSSLV Trigger: GACCAAGGAAGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATGATTCAAAAACTGGCAGAGCAGCTGAGCCAACAGGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCAGCAGCATCAGACCTaGCTTGCTTGCTGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGQQHQT*LACCLL Trigger: CAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCTG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 90 bp | GCCACCATTCTGGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTaGTACAGGATGTATAATGGTGTCTGTGTTCCTTTGTGTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATILAREAAAAGMFL*YRMYNGVCVPLCSA Trigger: GGCCGAACACAAAGGAACACAGACACCATTATACATCCTGTAGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGAATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
||
| CDS GCA 90 bp | GCCACCATTCTGGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTaGAGGATGTATAATGGTGTCTGTGTTCCTTTGTGTTCGGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ATILAREAAAAGMFL*RMYNGVCVPLCSAY Trigger: ATAGGCCGAACACAAAGGAACACAGACACCATTATACATCCTGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGAATGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTGCTGATCTTGCTCTCTaGGACATGCAAATCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGADLAL*DMQITE Trigger: CTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGC...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS TCA 90 bp | GTTTTTGATAGCTGGGTCTTTGATTTCTGCTGTTGTCACTTCTCCTaGGGTGTGTTTCCCTTGCAGACCTGTTTCCCATGTCGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VFDSWVFDFCCCHFS*GVFPLQTCFPCRQP Trigger: CGGCTGGCGACATGGGAAACAGGTCTGCAAGGGAAACACACCTCAGGAGAAGTGACAACAGCAGAAATCAAAGACCCAGCTATCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS GCA 90 bp | TCTTTGATTTCTGCTGTTGTCACTTCTCCTGAGGTGTGTTTCCCTTaGAGACCTGTTTCCCATGTCGCCAGCCGACTTAGTGGAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLISAVVTSPEVCFP*RPVSHVASRLSGDF Trigger: GAAGTCTCCACTAAGTCGGCTGGCGACATGGGAAACAGGTCTGCAAGGGAAACACACCTCAGGAGAAGTGACAACAGCAGAAATCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTGGGTCACCACAGTCTaGCTTCTGCTGCTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CDILFYTGKTHRKGAQVGWVTTV*LLLLSS Trigger: AGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS TCA 90 bp | CCTGCCTGGTACTTTCCAAGTCCTCTGATAGACTTGACACAGTCTTaGAGATCTGGGCAGTCGTCTCCTGCATATCATCTTGGAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PAWYFPSPLIDLTQS*RSGQSSPAYHLGRL Trigger: AAGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAGACTGTGTCAAGTCTATCAGAGGACTTGGAAAGTACCAGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS GCA 90 bp | AGACAGCATTGGATGTCTTCTGAGATCTTCTGGAACAGAGTCCACTaGTGTACCAGCCACAAGAACCTCTTCCACTTGGTAAATGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQHWMSSEIFWNRVH*CTSHKNLFHLVNES Trigger: GCTCTCATTTACCAAGTGGAAGAGGTTCTTGTGGCTGGTACAGCAGTGGACTCTGTTCCAGAAGATCTCAGAAGACATCCAATGCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS GCA 90 bp | GCTTCCAGTTCCTTGACAGGCTTCTCACAGGTCAAGGCCATTTCCTaGCTGATGTTCATGATGCTGTTCTTTAGATCTGTGATGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSSLTGFSQVKAIS*LMFMMLFFRSVMSF Trigger: GAAGGACATCACAGATCTAAAGAACAGCATCATGAACATCAGGCAGGAAATGGCCTTGACCTGTGAGAAGCCTGTCAAGGAACTGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGAGTTTCATTGAGGGATaGGTGGTACAGAACAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFYTGKTHRKGAQVGMPASFIEG*VVQNNL Trigger: CAGATTGTTCTGTACCACCAATCCCTCAATGAAACT...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCTCATTTTATCCACCTaGATGTCCATGGGAAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGLILST*MSMGKI Trigger: TATCTTTCCCATGGACATCAAGGTGGATAAAATGAG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCGAGTTTCAAACTCTTaGGCAGTCTTTGTTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGRVSNS*AVFVTE Trigger: TTCAGTAACAAAGACTGCCAAAGAGTTTGAAACTCG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTCAACATCTCTCTCATTaGATAGGATGCCACCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGQHLSH*IGCHLF Trigger: AAAAAGGTGGCATCCTATCAAATGAGAGAGATGTTG...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGGTTCACAGTGTATCTCATaGTCAGCATTTTCAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILHWKDSQERSTGRHARGSQCIS*SAFSDS Trigger: TGAGTCTGAAAATGCTGACAATGAGATACACTGTGA...ACCGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 90 bp | TACAGAACAATCTGTGAGTGCTCCTGTCTTAGTGCTCCTTCCAAATaGGCTTGTTTTGCTTCCAGTTCCTTGACAGGCTTCTCACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YRTICECSCLSAPSK*ACFASSSLTGFSQV Trigger: GACCTGTGAGAAGCCTGTCAAGGAACTGGAAGCAAAACAAGCTCATTTGGAAGGAGCACTAAGACAGGAGCACTCACAGATTGTTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 90 bp | ATCTCCAAAAGGATGGTAAGGTTGCTGATCTTGCTCTCTTGGACATaGAAATCACTGAGCATCTGCAGCAGCATCAGACCTTGCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISKRMVRLLILLSWT*KSLSICSSIRPCLL Trigger: AAGCAAGCAAGGTCTGATGCTGCTGCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCTTTTGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | TATGCTGCATTCTATAGACAGCATTGGATGTCTTCTGAGATCTTCTaGAACAGAGTCCACTGCTGTACCAGCCACAAGAACCTCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YAAFYRQHWMSSEIF*NRVHCCTSHKNLFH Trigger: GTGGAAGAGGTTCTTGTGGCTGGTACAGCAGTGGACTCTGTTCCAGAAGATCTCAGAAGACATCCAATGCTGTCTATAGAATGCAGCATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | CACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTATCCTTCCAAATGAGCTaGTTTTGCTTCCAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HIGFLCLCVSLGERTPSVSFQMS*FCFQFL Trigger: AAGGAACTGGAAGCAAAACAAGCTCATTTGGAAGGA...TACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCATGCCCGCGCAACATCTCTCTCATTaGATAGGATGCCACCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFYTGKTHRKGAQVGMPAQHLSH*IGCHLF Trigger: AAAAAGGTGGCATCCTATCAAATGAGAGAGATGTTG...CGCGGGCATGCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAAACTGCATCATCTTCCTaGATCTTCACGGTGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MKRRACWSREVRVYLSHKTASSS*IFTVQV Trigger: CACTTGCACCGTGAAGATCAAGGAAGATGATGCAGT...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CCA 90 bp | TGCATGAAAGCAAAGTCTTTCTGGGCTGTTGATGAAACAAAGGACTaGTTCACTTGTAGAACTGCCTGCCTGGTACTTTCCAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CMKAKSFWAVDETKD*FTCRTACLVLSKSS Trigger: AGAGGACTTGGAAAGTACCAGGCAGGCAGTTCTACAAGTGAACCAGTCCTTTGTTTCATCAACAGCCCAGAAAGACTTTGCTTTCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | TGTGTGTGTGCTTCCTGCATTTTAGAGAGAGTTTCATTGAGGGATTaGTGGTACAGAACAATCTGTGAGTGCTCCTGTCTTAGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CVCASCILERVSLRD*WYRTICECSCLSAP Trigger: AGGAGCACTAAGACAGGAGCACTCACAGATTGTTCTGTACCACCAATCCCTCAATGAAACTCTCTCTAAAATGCAGGAAGCACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGACAGCAGCATCAGACCTaGCTTGCTTGCTGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFGKSAVTFYSTLERLTGQQHQT*LACCLL Trigger: CAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCTG...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTTCACAGTGTATCTCATaGTCAGCATTTTCAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCSQCIS*SAFSDS Trigger: TGAGTCTGAAAATGCTGACAATGAGATACACTGTGA...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | AATGGTCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCGTCACAGGGGGATATTaGATTGGAATTGTTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGHIGFLCLCVSLGERTPVTGGY*IGIVPF Trigger: AAAAGGAACAATTCCAATCAAATATCCCCCTGTGAC...GGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 90 bp | TCTTGGACATGCAAATCACTGAGCATCTGCAGCAGCATCAGACCTTaGTTGCTTGCTGTCTCCTGTAGTACAGATATATACTTAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SWTCKSLSICSSIRP*LLAVSCSTDIYLVT Trigger: TGTCACTAAGTATATATCTGTACTACAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCTGCAGATGCTCAGTGATTTGCATGTCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 90 bp | AAGGCATGCTCACTGATGCGTCTCTCAAAGGCTTCACCACGGCTCTaGACTTCATTTCTCAGTAAGTTGTGTCTTTTTGTAAGTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KACSLMRLSKASPRL*TSFLSKLCLFVSSL Trigger: CAAAGAACTTACAAAAAGACACAACTTACTGAGAAATGAAGTGCAGAGCCGTGGTGAAGCCTTTGAGAGACGCATCAGTGAGCATGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGCTGCTCTGCCAGTTTTaGAATCATGGCTGGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLWEICCDILFYTGKTHRLLCQF*NHGWVT Trigger: GGTGACCCAGCCATGATTCAAAAACTGGCAGAGCAG...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAAGGAGAGCATGCTGGAGTAGAGAGGTGAGAGTCTACCTCTCACACAAATCCTTCCAAATGAGCTaGTTTTGCTTCCAGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MKRRACWSREVRVYLSHKSFQMS*FCFQFL Trigger: AAGGAACTGGAAGCAAAACAAGCTCATTTGGAAGGA...TTTGTGTGAGAGGTAGACTCTCACCTCTCTACTCCAGCATGCTCTCCTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TCACATTGGGTTTCTATGCCTCTGTGTCTCCTTAGGAGAAAGGACCCCCTCTGTGACTCAATGGTGTATTaGAAAATATACACTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHWVSMPLCLLRRKDPLCDSMVY*KIYTPR Trigger: CCTTGGAGTGTATATTTTCAAATACACCATTGAGTC...ACAGAGGGGGTCCTTTCTCCTAAGGAGACACAGAGGCATAGAAACCCAATGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TGTGACATTTTATTCTACACTGGAAAGACTCACAGGAAAGGAGCACAGGTAGGCTTAGAGAGAGTTTCATaGAGGGATTGGTGGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CDILFYTGKTHRKGAQVGLERVS*RDWWYR Trigger: TCTGTACCACCAATCCCTCAATGAAACTCTCTCTAA...GCCTACCTGTGCTCCTTTCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 90 bp | TTCATGATGCTGTTCTTTAGATCTGTGATGTCCTTCCACGTGGGCTaGTTTTCTTGCATGAAAGCAAAGTCTTTCTGGGCTGTTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: FMMLFFRSVMSFHVG*FSCMKAKSFWAVDE Trigger: TTCATCAACAGCCCAGAAAGACTTTGCTTTCATGCAAGAAAATCAGCCCACGTGGAAGGACATCACAGATCTAAAGAACAGCATCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | GTACTTTCCAAGTCCTCTGATAGACTTGACACAGTCTTGAAGATCTaGGCAGTCGTCTCCTGCATATCATCTTGGAAGACTTTAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSKSSDRLDTVLKI*AVVSCISSWKTLNC Trigger: ACAATTTAAAGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAGACTGTGTCAAGTCTATCAGAGGACTTGGAAAGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGGCTGATCTTGCTCTCTaGGACATGCAAATCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLWEICCDILFYTGKTHRADLAL*DMQITE Trigger: CTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGC...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGACTGCATCATCTTCCTaGATCTTCACGGTGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLWEICCDILFYTGKTHRTASSS*IFTVQV Trigger: CACTTGCACCGTGAAGATCAAGGAAGATGATGCAGT...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 90 bp | AGTTTGGACCTATGTATCCAGGACAGCATCTCCATTCTAATGAGGTaGCAATCTTATGCTGCATTCTATAGACAGCATTGGATGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLDLCIQDSISILMR*QSYAAFYRQHWMSS Trigger: AGAAGACATCCAATGCTGTCTATAGAATGCAGCATAAGATTGTCACCTCATTAGAATGGAGATGCTGTCCTGGATACATAGGTCCAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | GACACAGTCTTGAAGATCTGGGCAGTCGTCTCCTGCATATCATCTTaGAAGACTTTAAATTGTTCTTTTACGATGTTCTTTAGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: DTVLKIWAVVSCISS*KTLNCSFTMFFSRS Trigger: GGATCTGCTAAAGAACATCGTAAAAGAACAATTTAAAGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAGACTGTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 90 bp | AGTAAGTTGTGTCTTTTTGTAAGTTCTTTGGTAAGAACGTTCAGTTaGTTGATGGCACCGATCAGGTTTTGTAGCTCTCTGCGAGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKLCLFVSSLVRTFS*LMAPIRFCSSLRVT Trigger: AGTTACTCGCAGAGAGCTACAAAACCTGATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACACAACTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGTTGATAGCTGGGTCTTaGATTTCTGCTGTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLWEICCDILFYTGKTHRLIAGS*ISAVVT Trigger: AGTGACAACAGCAGAAATCAAAGACCCAGCTATCAA...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATTGATAGCTGGGTCTTaGATTTCTGCTGTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FFGKSAVTFYSTLERLTGLIAGS*ISAVVT Trigger: AGTGACAACAGCAGAAATCAAAGACCCAGCTATCAA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATAGTTTCATTGAGGGATaGGTGGTACAGAACAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGREVAHTKLDVKCLNRHSFIEG*VVQNNL Trigger: CAGATTGTTCTGTACCACCAATCCCTCAATGAAACT...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGACGAGTTTCAAACTCTTaGGCAGTCTTTGTTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FFGKSAVTFYSTLERLTGRVSNS*AVFVTE Trigger: TTCAGTAACAAAGACTGCCAAAGAGTTTGAAACTCG...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGATTCAAAACTGGGTTTTaGATAGCTGGGTCTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FFGKSAVTFYSTLERLTGFKTGF*IAGSLI Trigger: AATCAAAGACCCAGCTATCAAAAACCCAGTTTTGAA...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATCTCATTTTATCCACCTaGATGTCCATGGGAAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: GGREVAHTKLDVKCLNRHLILST*MSMGKI Trigger: TATCTTTCCCATGGACATCAAGGTGGATAAAATGAG...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGACTTTTTGTAAGTTCTTaGGTAAGAACGTTCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FFGKSAVTFYSTLERLTGLFVSS*VRTFSW Trigger: CCAACTGAACGTTCTTACCAAAGAACTTACAAAAAG...TCCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTGGGAAATCTGCTGTGACATTTTATTCTACACTGGAAAGACTCACAGGGACTCAATGGTGTATTaGAAAATATACACTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLWEICCDILFYTGKTHRDSMVY*KIYTPR Trigger: CCTTGGAGTGTATATTTTCAAATACACCATTGAGTC...CCTGTGAGTCTTTCCAGTGTAGAATAAAATGTCACAGCAGATTTCCCAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATGTCACAGGGGGATATTaGATTGGAATTGTTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGREVAHTKLDVKCLNRHVTGGY*IGIVPF Trigger: AAAAGGAACAATTCCAATCAAATATCCCCCTGTGAC...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGAAGTAGCACACACAAAATTAGATGTAAAATGTCTAAATAGGCATCTTTTTGTAAGTTCTTaGGTAAGAACGTTCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGREVAHTKLDVKCLNRHLFVSS*VRTFSW Trigger: CCAACTGAACGTTCTTACCAAAGAACTTACAAAAAG...ATGCCTATTTAGACATTTTACATCTAATTTTGTGTGTGCTACTTCTCTGCCTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS TCA 90 bp | GATAACAATCGGTCAACATTCCAAGTTAAATTAGATAGGGCGGCTTaGGTTTTAATTTCAACTATTGATTCCACAAGTTCTGTCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: DNNRSTFQVKLDRAA*VLISTIDSTSSVRL Trigger: AAGTCTGACAGAACTTGTGGAATCAATAGTTGAAATTAAAACTCAAGCCGCCCTATCTAATTTAACTTGGAATGTTGACCGATTGTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | CTTCAGAAGATCTCTCAGCAGCTGCAGGACCCTGAGTaGAGGGGTTCTGAGTGGCCGAGAGCACTTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQKISQQLQDPE*RGSEWPRALGG Trigger: GCCTCCAAGTGCTCTCGGCCACTCAGAACCCCTCCACTCAGGGTCCTGCAGCTGCTGAGAGATCTTCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS GCA 72 bp | TTGATCTTCACGGTGCAAGTGTCACCCATGAACGGGTaGCGGCAAGCGCAGATGAAGTTGGATCTCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIFTVQVSPMNG*RQAQMKLDLPL Trigger: CAGCGGGAGATCCAACTTCATCTGCGCTTGCCGGCACCCGTTCATGGGTGACACTTGCACCGTGAAGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CCA 72 bp | CAGCAGCTGCAGGACCCTGAGTGGAGGGGTTCTGAGTaGCCGAGAGCACTTGGAGGCTCAGTATTTCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: QQLQDPEWRGSE*PRALGGSVFHL Trigger: TAAGTGAAATACTGAGCCTCCAAGTGCTCTCGGCCACTCAGAACCCCTCCACTCAGGGTCCTGCAGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CAA 90 bp | CATGGCTGGGTCACCACAGTCTTGCTTCTGCTGCTGAGCTCTTCCTaGGTCAACAGCGGTGTGACTTTCAGCCTGGTTACTGTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGWVTTVLLLLLSSS*VNSGVTFSLVTVCQ Trigger: CTGGCACACAGTAACCAGGCTGAAAGTCACACCGCTGTTGACCAAGGAAGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CCA 72 bp | AAGTTGGATCTCCCGCTGATGCATGTGCCACCATTCTaGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KLDLPLMHVPPF*HGKLLQLECSC Trigger: ACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAGAATGGTGGCACATGCATCAGCGGGAGATCCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CAA 90 bp | GGCTTCTCCCGTCAGGAGGGGTGCTTGTCTCAGAGGGCTGTGATGTaGACTGTAGGAGAACATCGTCTTCAGAAGATCTCTCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFSRQEGCLSQRAVM*TVGEHRLQKISQQL Trigger: CAGCTGCTGAGAGATCTTCTGAAGACGATGTTCTCCTACAGTCAACATCACAGCCCTCTGAGACAAGCACCCCTCCTGACGGGAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | CCTGTTGGCTCAGCTGCTCTGCCAGTTTTTGAATCATaGCTGGGTCACCACAGTCTTGCTTCTGCTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVGSAALPVFES*LGHHSLASAAE Trigger: CTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATGATTCAAAAACTGGCAGAGCAGCTGAGCCAACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | CAGCTGCTCTGCCAGTTTTTGAATCATGGCTGGGTCACCACAGTCTaGCTTCTGCTGCTGAGCTCTTCCTTGGTCAACAGCGGTGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: QLLCQFLNHGWVTTV*LLLLSSSLVNSGVT Trigger: AGTCACACCGCTGTTGACCAAGGAAGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATGATTCAAAAACTGGCAGAGCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | GAATTTCAACGTGGCATTAGCAAGCATGACAGTTCCTaGTCCGGTGCTGGGCTTGATGCTGGGTTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EFQRGISKHDSS*SGAGLDAGFVL Trigger: CAGGACAAACCCAGCATCAAGCCCAGCACCGGAGCAGGAACTGTCATGCTTGCTAATGCCACGTTGAAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | TCTGCTGTTGTCACTTCTCCTGAGGTGTGTTTCCCTTaGAGACCTGTTTCCCATGTCGCCAGCCGACTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAVVTSPEVCFP*RPVSHVASRLS Trigger: ACTAAGTCGGCTGGCGACATGGGAAACAGGTCTGCAAGGGAAACACACCTCAGGAGAAGTGACAACAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | TTGGCTCAGCTGCTCTGCCAGTTTTTGAATCATGGCTaGGTCACCACAGTCTTGCTTCTGCTGCTGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAQLLCQFLNHG*VTTVLLLLLSS Trigger: AGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATGATTCAAAAACTGGCAGAGCAGCTGAGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | TCTGCGAGTAACTGTGGCTTCCTTTGGCTTGTGTATAACCTGGTGTaGAAGCGACGACCTCTGCTCCAGCAAAGGCTGAAGGATCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SASNCGFLWLVYNLV*KRRPLLQQRLKDLH Trigger: ATGGAGATCCTTCAGCCTTTGCTGGAGCAGAGGTCGTCGCTTCAACACCAGGTTATACACAAGCCAAAGGAAGCCACAGTTACTCGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | CTGTGTGCCAGCTGCTGCTGTTCTTCCACTTTGAGCTaGCAGTTTGGACCTATGTATCCAGGACAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCASCCCSSTLS*QFGPMYPGQHL Trigger: GAGATGCTGTCCTGGATACATAGGTCCAAACTGTCAGCTCAAAGTGGAAGAACAGCAGCAGCTGGCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | TGTCAGACTTTTCTGAGAACTCTGACTGCCTGGCAGTaGGCCTTTGGTCCACCTGGGTATGAGTGCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CQTFLRTLTAWQ*AFGPPGYECIL Trigger: CAGAATGCACTCATACCCAGGTGGACCAAAGGCTCACTGCCAGGCAGTCAGAGTTCTCAGAAAAGTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | CTGGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTaGTACAGGATGTATAATGGTGTCTGTGTTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAREAAAAGMFL*YRMYNGVCVPL Trigger: CAAAGGAACACAGACACCATTATACATCCTGTAGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
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| CDS GCA 72 bp | CTGGCACGGGAAGCTGCTGCAGCTGGAATGTTCCTGTaGAGGATGTATAATGGTGTCTGTGTTCCTTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAREAAAAGMFL*RMYNGVCVPLC Trigger: ACACAAAGGAACACAGACACCATTATACATCCTGCACAGGAACATTCCAGCTGCAGCAGCTTCCCGTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204333.2 |
||
| CDS CAA 72 bp | GTCCACTGCTGTACCAGCCACAAGAACCTCTTCCACTaGGTAAATGAGAGCCAGTGTCCAGTATCACTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VHCCTSHKNLFH*VNESQCPVSLS Trigger: CGACAGTGATACTGGACACTGGCTCTCATTTACCAAGTGGAAGAGGTTCTTGTGGCTGGTACAGCAGTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | TGCCAGTTTTTGAATCATGGCTGGGTCACCACAGTCTaGCTTCTGCTGCTGAGCTCTTCCTTGGTCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CQFLNHGWVTTV*LLLLSSSLVNS Trigger: GCTGTTGACCAAGGAAGAGCTCAGCAGCAGAAGCAAGACTGTGGTGACCCAGCCATGATTCAAAAACTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | CTGTACCAGCCACAAGAACCTCTTCCACTTGGTAAATaGGAGCCAGTGTCCAGTATCACTGTCGGGGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LYQPQEPLPLGK*EPVSSITVGDN Trigger: GTTATCCCCGACAGTGATACTGGACACTGGCTCTCATTTACCAAGTGGAAGAGGTTCTTGTGGCTGGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | TATTTAGGCCATCTTCTGTTTCTAAGGCATGCTCACTaGTGCGTCTCTCAAAGGCTTCACCACGGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: YLGHLLFLRHAH*CVSQRLHHGSA Trigger: TGCAGAGCCGTGGTGAAGCCTTTGAGAGACGCATCAGTGAGCATGCCTTAGAAACAGAAGATGGCCTAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | TGGATGTCTTCTGAGATCTTCTGGAACAGAGTCCACTaGTGTACCAGCCACAAGAACCTCTTCCACTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: WMSSEIFWNRVH*CTSHKNLFHLV Trigger: TACCAAGTGGAAGAGGTTCTTGTGGCTGGTACAGCAGTGGACTCTGTTCCAGAAGATCTCAGAAGACATCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | AGGATGGTAAGGTTGCTGATCTTGCTCTCTTGGACATaGAAATCACTGAGCATCTGCAGCAGCATCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RMVRLLILLSWT*KSLSICSSIRP Trigger: AGGTCTGATGCTGCTGCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | CCTTTGGAAAAATCTGGTGCTACTGCATCATCTTCCTaGATCTTCACGGTGCAAGTGTCACCCATGAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLEKSGATASSS*IFTVQVSPMNG Trigger: CCCGTTCATGGGTGACACTTGCACCGTGAAGATCAAGGAAGATGATGCAGTAGCACCAGATTTTTCCAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | TCTCCCCTGGCTGATTCTTTCTCCATCTCCAAAAGGATGGTAAGGTaGCTGATCTTGCTCTCTTGGACATGCAAATCACTGAGCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLADSFSISKRMVR*LILLSWTCKSLSIC Trigger: GCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCTTTTGGAGATGGAGAAAGAATCAGCCAGGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | TTTCTCCATCTCCAAAAGGATGGTAAGGTTGCTGATCTTGCTCTCTaGGACATGCAAATCACTGAGCATCTGCAGCAGCATCAGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLHLQKDGKVADLAL*DMQITEHLQQHQTL Trigger: CAAGGTCTGATGCTGCTGCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCTTTTGGAGATGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | GCTGATTCTTTCTCCATCTCCAAAAGGATGGTAAGGTTGCTGATCTaGCTCTCTTGGACATGCAAATCACTGAGCATCTGCAGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ADSFSISKRMVRLLI*LSWTCKSLSICSSI Trigger: GATGCTGCTGCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCTTTTGGAGATGGAGAAAGAATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | ATCTGTGAGTGCTCCTGTCTTAGTGCTCCTTCCAAATaGGCTTGTTTTGCTTCCAGTTCCTTGACAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ICECSCLSAPSK*ACFASSSLTGF Trigger: GAAGCCTGTCAAGGAACTGGAAGCAAAACAAGCTCATTTGGAAGGAGCACTAAGACAGGAGCACTCACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | TCCTTGACAGGCTTCTCACAGGTCAAGGCCATTTCCTaGCTGATGTTCATGATGCTGTTCTTTAGATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTGFSQVKAIS*LMFMMLFFRSV Trigger: CACAGATCTAAAGAACAGCATCATGAACATCAGGCAGGAAATGGCCTTGACCTGTGAGAAGCCTGTCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | GCAAAGTCTTTCTGGGCTGTTGATGAAACAAAGGACTaGTTCACTTGTAGAACTGCCTGCCTGGTACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AKSFWAVDETKD*FTCRTACLVLS Trigger: GGAAAGTACCAGGCAGGCAGTTCTACAAGTGAACCAGTCCTTTGTTTCATCAACAGCCCAGAAAGACTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS GCA 72 bp | TGCAAATCACTGAGCATCTGCAGCAGCATCAGACCTTaGTTGCTTGCTGTCTCCTGTAGTACAGATATATAC | + |
|
Preference number: 6 (lower is better) Translates to: CKSLSICSSIRP*LLAVSCSTDIY Trigger: GTATATATCTGTACTACAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCTGCAGATGCTCAGTGATTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | AAGTCCTCTGATAGACTTGACACAGTCTTGAAGATCTaGGCAGTCGTCTCCTGCATATCATCTTGGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: KSSDRLDTVLKI*AVVSCISSWKT Trigger: AGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAGACTGTGTCAAGTCTATCAGAGGACTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | GTTTCCCATGTCGCCAGCCGACTTAGTGGAGACTTCTaGTTGATCAGACTTTCTGGAAAAACTCTGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSHVASRLSGDF*LIRLSGKTLKE Trigger: TTCCTTCAGAGTTTTTCCAGAAAGTCTGATCAACAAGAAGTCTCCACTAAGTCGGCTGGCGACATGGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | TTCTCCATCTCCAAAAGGATGGTAAGGTTGCTGATCTaGCTCTCTTGGACATGCAAATCACTGAGCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSISKRMVRLLI*LSWTCKSLSIC Trigger: GCAGATGCTCAGTGATTTGCATGTCCAAGAGAGCAAGATCAGCAACCTTACCATCCTTTTGGAGATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | CTGTGCTACAGGATGTATAATGGTGTCTGTGTTCCTTaGTGTTCGGCCTATCAGAATGGTGGTCATGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LCYRMYNGVCVP*CSAYQNGGHVH Trigger: GTGAACATGACCACCATTCTGATAGGCCGAACACAAAGGAACACAGACACCATTATACATCCTGTAGCACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
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| CDS CAA 72 bp | TTCCTGTGCAGGATGTATAATGGTGTCTGTGTTCCTTaGTGTTCGGCCTATCAGAATGGTGGTCATGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FLCRMYNGVCVP*CSAYQNGGHVH Trigger: GTGAACATGACCACCATTCTGATAGGCCGAACACAAAGGAACACAGACACCATTATACATCCTGCACAGGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204333.2 |
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| CDS CAA 90 bp | GGAATGTTCCTGTGCTACAGGATGTATAATGGTGTCTGTGTTCCTTaGTGTTCGGCCTATCAGAATGGTGGTCATGTTCACCGTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GMFLCYRMYNGVCVP*CSAYQNGGHVHRFL Trigger: AAGAAAACGGTGAACATGACCACCATTCTGATAGGCCGAACACAAAGGAACACAGACACCATTATACATCCTGTAGCACAGGAACATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129603.4 |
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| CDS TCA 72 bp | CTGTTCTTTAGATCTGTGATGTCCTTCCACGTGGGCTaGTTTTCTTGCATGAAAGCAAAGTCTTTCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFFRSVMSFHVG*FSCMKAKSFWA Trigger: AGCCCAGAAAGACTTTGCTTTCATGCAAGAAAATCAGCCCACGTGGAAGGACATCACAGATCTAAAGAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | GCTTCCTGCATTTTAGAGAGAGTTTCATTGAGGGATTaGTGGTACAGAACAATCTGTGAGTGCTCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASCILERVSLRD*WYRTICECSCL Trigger: AAGACAGGAGCACTCACAGATTGTTCTGTACCACCAATCCCTCAATGAAACTCTCTCTAAAATGCAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | TCCCATGTCGCCAGCCGACTTAGTGGAGACTTCTTGTaGATCAGACTTTCTGGAAAAACTCTGAAGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: SHVASRLSGDFL*IRLSGKTLKEF Trigger: AAATTCCTTCAGAGTTTTTCCAGAAAGTCTGATCAACAAGAAGTCTCCACTAAGTCGGCTGGCGACATGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | TGTGTGTGTGCTTCCTGCATTTTAGAGAGAGTTTCATaGAGGGATTGGTGGTACAGAACAATCTGTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CVCASCILERVS*RDWWYRTICEC Trigger: GCACTCACAGATTGTTCTGTACCACCAATCCCTCAATGAAACTCTCTCTAAAATGCAGGAAGCACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | TCCACAGGTACCTGTAGAAGCATTACGGCATGCCATTaGAAGCTCACGGACAGTTTTATTAAGCAAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: STGTCRSITACH*KLTDSFIKQRE Trigger: TTCTCTTTGCTTAATAAAACTGTCCGTGAGCTTTCAATGGCATGCCGTAATGCTTCTACAGGTACCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | AAATCACTGAGCATCTGCAGCAGCATCAGACCTTGCTaGCTTGCTGTCTCCTGTAGTACAGATATATACTTA | + |
|
Preference number: 6 (lower is better) Translates to: KSLSICSSIRPC*LAVSCSTDIYL Trigger: TAAGTATATATCTGTACTACAGGAGACAGCAAGCAAGCAAGGTCTGATGCTGCTGCAGATGCTCAGTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | CTTTTTGTAAGTTCTTTGGTAAGAACGTTCAGTTGGTaGATGGCACCGATCAGGTTTTGTAGCTCTCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LFVSSLVRTFSW*MAPIRFCSSLR Trigger: TCGCAGAGAGCTACAAAACCTGATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | ATGAGCACACCAATTCTTCCCTCTAGTTGTTTCAAAACTGGGTTTTaGATAGCTGGGTCTTTGATTTCTGCTGTTGTCACTTCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MSTPILPSSCFKTGF*IAGSLISAVVTSPE Trigger: CTCAGGAGAAGTGACAACAGCAGAAATCAAAGACCCAGCTATCAAAAACCCAGTTTTGAAACAACTAGAGGGAAGAATTGGTGTGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | AAGTTGTGTCTTTTTGTAAGTTCTTTGGTAAGAACGTTCAGTTGGTaGATGGCACCGATCAGGTTTTGTAGCTCTCTGCGAGTAACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KLCLFVSSLVRTFSW*MAPIRFCSSLRVTV Trigger: CACAGTTACTCGCAGAGAGCTACAAAACCTGATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACACAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | CTCTCAAAGGCTTCACCACGGCTCTGCACTTCATTTCTCAGTAAGTaGTGTCTTTTTGTAAGTTCTTTGGTAAGAACGTTCAGTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSKASPRLCTSFLSK*CLFVSSLVRTFSWL Trigger: CAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACACAACTTACTGAGAAATGAAGTGCAGAGCCGTGGTGAAGCCTTTGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | CTATGTATCCAGGACAGCATCTCCATTCTAATGAGGTaGCAATCTTATGCTGCATTCTATAGACAGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCIQDSISILMR*QSYAAFYRQHW Trigger: CCAATGCTGTCTATAGAATGCAGCATAAGATTGTCACCTCATTAGAATGGAGATGCTGTCCTGGATACATAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CCA 72 bp | TGTCTTTTTGTAAGTTCTTTGGTAAGAACGTTCAGTTaGTTGATGGCACCGATCAGGTTTTGTAGCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLFVSSLVRTFS*LMAPIRFCSSL Trigger: CAGAGAGCTACAAAACCTGATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | AGTTGTTTCAAAACTGGGTTTTTGATAGCTGGGTCTTaGATTTCTGCTGTTGTCACTTCTCCTGAGGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCFKTGFLIAGS*ISAVVTSPEVC Trigger: ACACACCTCAGGAGAAGTGACAACAGCAGAAATCAAAGACCCAGCTATCAAAAACCCAGTTTTGAAACAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 90 bp | CTCTGCACTTCATTTCTCAGTAAGTTGTGTCTTTTTGTAAGTTCTTaGGTAAGAACGTTCAGTTGGTTGATGGCACCGATCAGGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCTSFLSKLCLFVSS*VRTFSWLMAPIRFC Trigger: ACAAAACCTGATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACACAACTTACTGAGAAATGAAGTGCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS GCA 72 bp | CTTGACACAGTCTTGAAGATCTGGGCAGTCGTCTCCTaGATATCATCTTGGAAGACTTTAAATTGTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDTVLKIWAVVS*ISSWKTLNCSF Trigger: AAAAGAACAATTTAAAGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAGACTGTGTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CAA 72 bp | AGGTATGAGTGTCTTGGTCACTTTAGATTCAATGCCTaGCAAACGAGTTTCAAACTCTTTGGCAGTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RYECLGHFRFNA*QTSFKLFGSLC Trigger: ACAAAGACTGCCAAAGAGTTTGAAACTCGTTTGCAAGGCATTGAATCTAAAGTGACCAAGACACTCATACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CAA 72 bp | CTTGAAGATCTGGGCAGTCGTCTCCTGCATATCATCTaGGAAGACTTTAAATTGTTCTTTTACGATGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LEDLGSRLLHII*EDFKLFFYDVL Trigger: AAGAACATCGTAAAAGAACAATTTAAAGTCTTCCAAGATGATATGCAGGAGACGACTGCCCAGATCTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
||
| CDS CAA 72 bp | TCATTTCTCAGTAAGTTGTGTCTTTTTGTAAGTTCTTaGGTAAGAACGTTCAGTTGGTTGATGGCACCGATC | + |
|
Preference number: 6 (lower is better) Translates to: SFLSKLCLFVSS*VRTFSWLMAPI Trigger: GATCGGTGCCATCAACCAACTGAACGTTCTTACCAAAGAACTTACAAAAAGACACAACTTACTGAGAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS TCA 72 bp | CGGTCAACATTCCAAGTTAAATTAGATAGGGCGGCTTaGGTTTTAATTTCAACTATTGATTCCACAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSTFQVKLDRAA*VLISTIDSTSS Trigger: AGAACTTGTGGAATCAATAGTTGAAATTAAAACTCAAGCCGCCCTATCTAATTTAACTTGGAATGTTGACCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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| CDS CAA 72 bp | TTAGATTCAATGCCTTGCAAACGAGTTTCAAACTCTTaGGCAGTCTTTGTTACTGAAAGCATATTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LDSMPCKRVSNS*AVFVTESIFSS Trigger: AGAAGAAAATATGCTTTCAGTAACAAAGACTGCCAAAGAGTTTGAAACTCGTTTGCAAGGCATTGAATCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129603.4 ENSMUST00000204333.2 |
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