Pregenerated sensors for MMP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017737Ensembl transcript IDs: ENSMUST00000017881.3, ENSMUST00000137626.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTGTGTGTaGTGGTGGTGGTGGTGGTCTCTAGAGACTTGCACTGCACGGTTG | + |
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Preference number: 1 (lower is better) Translates to: CTWPASTFPSDGVCV*WWWWWSLETCTARL Trigger: CAACCGTGCAGTGCAAGTCTCTAGAGACCACCACCACCACCACCACACACAAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR TCA 90 bp | AGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCACAGTaGGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: STHAVYACCSCQQPQ*VSWTLGRERSLGSG Trigger: ACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR TCA 90 bp | CACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCACAGTGAGTaGGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: HMLYTHAAAASNHSE*VGLSGERGVWGLVS Trigger: TGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR CCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTaGGTTAAATACATGCATGTGAACATAACCTCATACATAATAAAT | + |
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Preference number: 1 (lower is better) Translates to: LCSGWSRARHTVSIL*VKYMHVNITSYIIN Trigger: ATTTATTATGTATGAGGTTATGTTCACATGCATGTATTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR CAA 90 bp | TGCTGTATACGCATGCTGCAGCTGCCAGCAACCACAGTGAGTGAGTaGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CCIRMLQLPATTVSE*DSREREESGVWFQQ Trigger: CTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCGTATACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | GCAACCACAGTGAGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTGGTGGTGGTGGTGGTaGTCTCTAGAGACTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: ATTVSELDSREREESGVWWWWWW*SLETCT Trigger: AGTGCAAGTCTCTAGAGACCACCACCACCACCACCA...CCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTGGGTTAAAGATGGGGTTTGTGTGTaGTGGTGGTGGTGGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LCSGWSRARHTVSILWVKDGVCV*WWWWWS Trigger: AGACCACCACCACCACCACCACACACAAACCCCATC...TTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTGGGTTAAAAACAAGAAAGGACGGTaGGCAGAGAGAGCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LCSGWSRARHTVSILWVKNKKGR*AERALP Trigger: AGGCAGGGCTCTCTCTGCCCACCGTCCTTTCTTGTT...TTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR TCA 90 bp | CAACTGAATACCTTAATATTTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTCTTGCACTGCACGGTTaGAGCAAAGAAGGAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: QLNTLIFMQRLEPRPTHSLALHG*SKEGAL Trigger: TAGGGCTCCTTCTTTGCTTCAACCGTGCAGTGCAAG...ACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAAATATTAAGGTATTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAAAGAGAGAGCCCTGCCTaGCTCCACTCCTTCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: FQQIYRTRRISEQSLKEERESPA*LHSFPV Trigger: GACTGGGAAGGAGTGGAGGCAGGCAGGGCTCTCTCT...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR TCA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACCAACTACAGATAAGCTaGTTGACTAAAGTAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHQLQIS*LTKVAG Trigger: TCCAGCTACTTTAGTCAATCAGCTTATCTGTAGTTG...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | ATAACCTCATACATAATAAATAAAAGGGCTGGAGTCGGGAGAGGTGGTTTAGCCGTGTGGTGGTGGTGGTaGTGGTCTCTAGAGACTTGC | + |
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Preference number: 2 (lower is better) Translates to: ITSYIINKRAGVGRGGLAVWWWW*WSLETC Trigger: GCAAGTCTCTAGAGACCACCACCACCACCACCACAC...GGCTAAACCACCTCTCCCGACTCCAGCCCTTTTATTTATTATGTATGAGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | CGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTGCTCCACCTTTCCCTCGGATaGGGTTTGTGTGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RHTKIKGQNPPYKVVFLLHLSLG*GLCVVV Trigger: CACCACCACACACAAACCCCATCCGAGGGAAAGGTG...GAGCAAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTTGTGTGTGGTGGTGGTaGTGGTGGTCTCTAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SQTPHKNKRSESTLQSCLCVWWW*WWSLET Trigger: AGTCTCTAGAGACCACCACCACCACCACCACACACA...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAATGGTCTCTAGAGACTTaGACTGCACGGTTGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: FQQIYRTRRISEQSLKEEWSLET*TARLKQ Trigger: TTGCTTCAACCGTGCAGTGCAAGTCTCTAGAGACCA...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTTCTAGAGACTTGCACTaGACGGTTGAAGCAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SQTPHKNKRSESTLQSCLSRDLH*TVEAKK Trigger: CTTCTTTGCTTCAACCGTGCAGTGCAAGTCTCTAGA...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CAA 90 bp | GCAACCACAGTGAGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTCCCTCGGATGGGGTTaGTGTGTGGTGGTGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: ATTVSELDSREREESGVWSLGWG*CVVVVV Trigger: CACCACCACCACCACACACAAACCCCATCCGAGGGA...CCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR TCA 72 bp | TATACGCATGCTGCAGCTGCCAGCAACCACAGTGAGTaGGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: YTHAAAASNHSE*VGLSGERGVWG Trigger: ACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR TCA 72 bp | GCTGTATACGCATGCTGCAGCTGCCAGCAACCACAGTaGGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: AVYACCSCQQPQ*VSWTLGRERSL Trigger: CAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCGTATACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR CCA 72 bp | CCAGCTAGCACCTTTCCCTCGGATGGGGTTTGTGTGTaGTGGTGGTGGTGGTGGTCTCTAGAGACTTGCACT | + |
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Preference number: 3 (lower is better) Translates to: PASTFPSDGVCV*WWWWWSLETCT Trigger: AGTGCAAGTCTCTAGAGACCACCACCACCACCACCACACACAAACCCCATCCGAGGGAAAGGTGCTAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCAGTGGTCTCTAGAGACTaGCACTGCACGGTTGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LYLSSTHAVYACCSCQQPVVSRD*HCTVEA Trigger: TGCTTCAACCGTGCAGTGCAAGTCTCTAGAGACCAC...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR TCA 72 bp | AAGACACTTGGTTATCCTTCCTGGATCAGTTCCAGCTaGGGGGTCATCTCACCTGGAGGACACAGTCTGACC | + |
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Preference number: 3 (lower is better) Translates to: KTLGYPSWISSS*GVISPGGHSLT Trigger: GGTCAGACTGTGTCCTCCAGGTGAGATGACCCCTCAGCTGGAACTGATCCAGGAAGGATAACCAAGTGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR CCA 72 bp | GAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTaGTTTCAGCAGATTTACAGGACACGGAGAATCTCT | + |
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Preference number: 3 (lower is better) Translates to: ELDSREREESGV*FQQIYRTRRIS Trigger: AGAGATTCTCCGTGTCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR-3UTR CAA 90 bp | CAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTACTTGCACTGCACGGTaGAAGCAAAGAAGGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QTPHKNKRSESTLQSCLLTCTAR*KQRRSP Trigger: AGGGCTCCTTCTTTGCTTCAACCGTGCAGTGCAAGT...AAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTAGAGGCGCCCATCCCTaGGGCCGTCGCTGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFRGAHP*GRRWYR Trigger: CCTGTACCAGCGACGGCCGCAGGGATGGGCGCCTCT...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| 3UTR CAA 72 bp | CGCATGCTGCAGCTGCCAGCAACCACAGTGAGTGAGTaGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RMLQLPATTVSE*DSREREESGVW Trigger: CCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGCTGGCAGCTGCAGCATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | GTCTCTAGAAGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGGCATGGCCGAACTCGTaGGCTGCCACCAGGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: VSRRDHQSVPGQLAPFPRAWPNS*AATRNR Trigger: CCTGTTCCTGGTGGCAGCGCACGAGTTCGGCCATGC...CCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCTTCTAGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCAAGGGGGAAAGGCGTGTaGCAGAAGGCCGTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LYLSSTHAVYACCSCQQPRGKGV*QKAVLA Trigger: GGCAAGGACGGCCTTCTGGCACACGCCTTTCCCCCT...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCAAAGGGGCAGCAGAGCTaGAGCCGAAAGCCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LYLSSTHAVYACCSCQQPKGQQS*SRKPGE Trigger: CTCTCCTGGCTTTCGGCTGCAGCTCTGCTGCCCCTT...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACCCAGAAGGCCGTCCTTaGCGTCGAAGGGATACCCGT | + |
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Preference number: 4 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHPEGRP*RRRDTR Trigger: ACGGGTATCCCTTCGACGGCAAGGACGGCCTTCTGG...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | GTCTCTAGAAGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGGGATCACGACGCCTTTaGCCAGCGACCACAACTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSRRDHQSVPGQLAPFPRGSRRL*PATTTR Trigger: ACGAGTTGTGGTCGCTGGGCAAAGGCGTCGTGATCC...CCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCTTCTAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | TGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAGATTTACAGGAGACGCACAGCTCTCCTaGCGAGTTGCCCCCAACTAC | + |
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Preference number: 4 (lower is better) Translates to: WTLGRERSLGSGFSRFTGDAQLS*RVAPNY Trigger: GTAGTTGGGGGCAACTCGGCAGGAGAGCTGTGCGTC...TCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTGGGTTAAAAGCGTCCCTCGAAGGTaGAGGGAAAGTGACATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LCSGWSRARHTVSILWVKSVPRR*RESDMG Trigger: CCCCATGTCACTTTCCCTTCACCTTCGAGGGACGCT...TTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCATCCGGCACGCTGGAATaGTCTAAGCCCAGTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LYLSSTHAVYACCSCQQPSGTLE*SKPSAW Trigger: CCATGCACTGGGCTTAGATCATTCCAGCGTGCCGGA...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTTATCCTGGTCATAGTTaGCTGTGGTGGCGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFYPGHS*LWWRTS Trigger: GCTGGTGCGCCACCACAGCCAACTATGACCAGGATA...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTGGGTTAAAGCGCTTCCGGCACGCTaGAATGATCTAAGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LCSGWSRARHTVSILWVKALPAR*NDLSPV Trigger: CACTGGGCTTAGATCATTCCAGCGTGCCGGAAGCGC...TTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | CAACTGAATACCTTAATATTTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTGGTGGCTGGAGGCCTTaGGTCAGGCTTAGAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: QLNTLIFMQRLEPRPTHSGGWRP*VRLRAT Trigger: CGTGGCTCTAAGCCTGACCCAAGGCCTCCAGCCACC...ACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAAATATTAAGGTATTCAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAAGCATTCTGTGGGTTAAAGTTCAGTTGTGGTGGTaGCTGGAGGCCTTGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LCSGWSRARHTVSILWVKVQLWW*LEALGQ Trigger: CTGACCCAAGGCCTCCAGCCACCACCACAACTGAAC...TTTAACCCACAGAATGCTTACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACATGCTGAGGTGCTGTCGGCTGTaGTTCAGTTGTGGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLNHNAQTPSTSLAHMLRCCRL*FSCGGG Trigger: GCCACCACCACAACTGAACCACAGCCGACAGCACCT...CAGCATGTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTACACATAGTGGGAGGTaGTGTCGGCTGTGGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFTHSGR*CRLWFS Trigger: ACTGAACCACAGCCGACAGCACCTCCCACTATGTGT...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCAGGCCCAGCACGGTCTTaGCTGTGTACACCCACATTT | + |
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Preference number: 4 (lower is better) Translates to: LYLSSTHAVYACCSCQQPGPARS*LCTPTF Trigger: AAATGTGGGTGTACACAGGCAAGACCGTGCTGGGCC...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTTCCGCGACACCAAACTaGATGACAATGTCCGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFSATPN*MTMSAS Trigger: CGAAGCGGACATTGTCATCCAGTTTGGTGTCGCGGA...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACCATAGTTGGCTGTGGTaGCGCACCAGCGGTAACCAT | + |
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Preference number: 4 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHHSWLW*RTSGNH Trigger: ATGGTTACCGCTGGTGCGCCACCACAGCCAACTATG...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | GTCTCTAGAAGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGAACAGGCTGTACCCTTaGTCTGGACAGAAACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSRRDHQSVPGQLAPFPRNRLYP*SGQKPH Trigger: GTGGGGTTTCTGTCCAGACCAAGGGTACAGCCTGTT...CCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCTTCTAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAAGGCGGAGTCCAGCGTTaGAGGCAGGGCTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEEGGVQR*RQGWPR Trigger: ACGTGGCCAGCCCTGCCTGCAACGCTGGACTCCGCC...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | GCAACCACAGTGAGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGCACGCCAGAAGAATTTaGCATGGCAGAAATAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ATTVSELDSREREESGVWHARRI*HGRNRL Trigger: AAGCCTATTTCTGCCATGGCAAATTCTTCTGGCGTG...CCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTAGCGTGGTGTTCGAATaGCCTTTAGTGTCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFSVVFE*PLVSGC Trigger: ACAGCCAGACACTAAAGGCCATTCGAACACCACGCT...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACAAGGTGAAGGGAAAGTaGCATGGGGCACCATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHKVKGK*HGAPFE Trigger: CTCAAATGGTGCCCCATGTCACTTTCCCTTCACCTT...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | CAACTGAATACCTTAATATTTATGCAGCGGTTGGAGCCGCGCCCGACACACAGTAGCGGCCCTCAAAGATaGACGGGAACACACAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLNTLIFMQRLEPRPTHSSGPQR*TGTHRV Trigger: AACCCTGTGTGTTCCCGTTCATCTTTGAGGGCCGCT...ACTGTGTGTCGGGCGCGGCTCCAACCGCTGCATAAATATTAAGGTATTCAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTAAATGCAGAGCGCCCTaGATCTCAGCAATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFKCRAP*ISAIAS Trigger: TGATGCTATTGCTGAGATCCAGGGCGCTCTGCATTT...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | CGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTGCTCGCTCTCCTGCCGAGTTaGCCCCAACTACGGTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTKIKGQNPPYKVVFLLALLPS*PQLRSR Trigger: ACGCGACCGTAGTTGGGGGCAACTCGGCAGGAGAGC...GAGCAAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | GTCTCTAGAAGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGCAAAAACATCCACATTaGAAGGATTGTCTGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRRDHQSVPGQLAPFPRQKHPH*KDCLPD Trigger: GTCCGGCAGACAATCCTTGCAATGTGGATGTTTTTG...CCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCTTCTAGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | ATAACCTCATACATAATAAATAAAAGGGCTGGAGTCGGGAGAGGTGGTTTAGCCGCCGAACTCGTGCGCTaGCACCAGGAACAGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ITSYIINKRAGVGRGGLAAELVR*HQEQAV Trigger: TACAGCCTGTTCCTGGTGGCAGCGCACGAGTTCGGC...GGCTAAACCACCTCTCCCGACTCCAGCCCTTTTATTTATTATGTATGAGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | TGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAGATTTACAGGATTTGGATCCAGTATGTaGTGTTATGATGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WTLGRERSLGSGFSRFTGFGSSM*CYDGPT Trigger: AGTGGGACCATCATAACATCACATACTGGATCCAAA...TCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAAGGTCATAGTTGGCTGTaGTGGCGCACCAGCGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEEGHSWL*WRTSGN Trigger: GTTACCGCTGGTGCGCCACCACAGCCAACTATGACC...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTTCTAAGCCCAGTGCATaGCCGAACTCGTGCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTPHKNKRSESTLQSCLSKPSA*PNSCAA Trigger: GGCAGCGCACGAGTTCGGCCATGCACTGGGCTTAGA...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTGTCACAAAAGCCAGCTGATTCAATTCTCAGACGCCACACAAAAATAAGTTGTGGTGGTGGCTaGAGGCCTTGGGTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLSQKPADSILRRHTKISCGGG*RPWVRL Trigger: AAGCCTGACCCAAGGCCTCCAGCCACCACCACAACT...TATTTTTGTGTGGCGTCTGAGAATTGAATCAGCTGGCTTTTGTGACAGGCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAAGTGGTTCAGTTGTGGTaGTGGCTGGAGGCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEEVVQLW*WLEALG Trigger: ACCCAAGGCCTCCAGCCACCACCACAACTGAACCAC...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | CGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTGCTCACTTATCCAGACTCCTaGGGCCCAGCACGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHTKIKGQNPPYKVVFLLTYPDS*GPARSC Trigger: GCAAGACCGTGCTGGGCCCCAGGAGTCTGGATAAGT...GAGCAAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | ATAACCTCATACATAATAAATAAAAGGGCTGGAGTCGGGAGAGGTGGTTTAGCCGTTTGCCTTCTCCGTTaGCGTGCTCCGTGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITSYIINKRAGVGRGGLAVCLLR*RAPCRV Trigger: GACTCTACACGGAGCACGGCAACGGAGAAGGCAAAC...GGCTAAACCACCTCTCCCGACTCCAGCCCTTTTATTTATTATGTATGAGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTTGTCGAAGTTCGATGTaGTCGCACACCAGAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTPHKNKRSESTLQSCLCRSSM*SHTRGA Trigger: GGCGCCTCTGGTGTGCGACCACATCGAACTTCGACA...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTGCTGTGGTTCAGTTGTaGTGGTGGCTGGAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQTPHKNKRSESTLQSCLAVVQL*WWLEAL Trigger: CAAGGCCTCCAGCCACCACCACAACTGAACCACAGC...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAATGGGGATCCACCTTCTaGGACTTCAAGTCGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEEWGSTF*DFKSNL Trigger: GAGATTCGACTTGAAGTCTCAGAAGGTGGATCCCCA...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR GCA 90 bp | ATAACCTCATACATAATAAATAAAAGGGCTGGAGTCGGGAGAGGTGGTTTAGCCGTACAGGAAGAGTACTaGTTGCCCAGGAAGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITSYIINKRAGVGRGGLAVQEEY*LPRKTK Trigger: CTTCGTCTTCCTGGGCAAGCAGTACTCTTCCTGTAC...GGCTAAACCACCTCTCCCGACTCCAGCCCTTTTATTTATTATGTATGAGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAAGCTGTACCCTTGGTCTaGACAGAAACCCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEEAVPLV*TETPLL Trigger: AAGAAGTGGGGTTTCTGTCCAGACCAAGGGTACAGC...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR TCA 90 bp | CGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTGCTCAATGGGCTTCCTCTATaGTTCAGGAACTTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTKIKGQNPPYKVVFLLNGLPL*FRNFQY Trigger: GTACTGGAAGTTCCTGAATCATAGAGGAAGCCCATT...GAGCAAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTGTCACAAAAGCCAGCTGATTCAATTCTCAGACGCCACACAAAAATAAGGTTTTCAGGTCTTTaGGGAAGACCACAAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KCLSQKPADSILRRHTKIRFSGL*GRPQKS Trigger: CGACTTTTGTGGTCTTCCCCAAAGACCTGAAAACCT...TATTTTTGTGTGGCGTCTGAGAATTGAATCAGCTGGCTTTTGTGACAGGCACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAGATTTACAGGACACGGAGAATCTCTGAGCAATCCTTGAAGGAAGAATTGTTCACCTCATTTTaGAAACTCACACGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQQIYRTRRISEQSLKEELFTSF*KLTRQK Trigger: CTTCTGGCGTGTGAGTTTCCAAAATGAGGTGAACAA...TTCTTCCTTCAAGGATTGCTCAGAGATTCTCCGTGTCCTGTAAATCTGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GACAATGTCCGCTTCGGGTCCGTACACGCGGGTGAAGGTGAGGGGTaGCACCTCGCCCCACACCGCGAAGGCGCGCGCGAAGGCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DNVRFGSVHAGEGEG*HLAPHREGAREGVI Trigger: GATGACGCCTTCGCGCGCGCCTTCGCGGTGTGGGGCGAGGTGGCACCCCTCACCTTCACCCGCGTGTACGGACCCGAAGCGGACATTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GAACGCCGGCGCCAGGGGGAAAGGCGTGTGCCAGAAGGCCGTCCTTaGCGTCGAAGGGATACCCGTCTCCGTGCTCCGCGACACCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ERRRQGERRVPEGRP*RRRDTRLRAPRHQT Trigger: AGTTTGGTGTCGCGGAGCACGGAGACGGGTATCCCTTCGACGGCAAGGACGGCCTTCTGGCACACGCCTTTCCCCCTGGCGCCGGCGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GAAATGGGCATCTCCCTGAACGCCGGCGCCAGGGGGAAAGGCGTGTaGCAGAAGGCCGTCCTTGCCGTCGAAGGGATACCCGTCTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EMGISLNAGARGKGV*QKAVLAVEGIPVSV Trigger: CACGGAGACGGGTATCCCTTCGACGGCAAGGACGGCCTTCTGGCACACGCCTTTCCCCCTGGCGCCGGCGTTCAGGGAGATGCCCATTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GGCGCCCATCCCTGCGGCCGTCGCTGGTACAGGAAGAGTACTGCTTaGCCAGGAAGACGAAGGGGAAGACGCACAGCTCTCCTGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAHPCGRRWYRKSTA*PGRRRGRRTALLPS Trigger: ACTCGGCAGGAGAGCTGTGCGTCTTCCCCTTCGTCTTCCTGGGCAAGCAGTACTCTTCCTGTACCAGCGACGGCCGCAGGGATGGGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GAAAACCCTCTTGGTCTGCGGATCCTCAAAGGCGGAGTCCAGCGTTaGAGGCAGGGCTGGCCACGTGCGGGCAGTAAGGAAGGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENPLGLRILKGGVQR*RQGWPRAGSKEGAL Trigger: CAGGGCCCCTTCCTTACTGCCCGCACGTGGCCAGCCCTGCCTGCAACGCTGGACTCCGCCTTTGAGGATCCGCAGACCAAGAGGGTTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCAAGGCGGAGTCCAGCGTaGCAGGCAGGGCTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LYLSSTHAVYACCSCQQPRRSPA*QAGLAT Trigger: CGTGGCCAGCCCTGCCTGCAACGCTGGACTCCGCCT...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | CATCTGGGCGGCCCGGGTGTAACCATAGCGGTACAAGTATGCCTCTaGCAGCTGGGTGTCCGTGAGGTTGGAGGTTTTCAGGTCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLGGPGVTIAVQVCL*QLGVREVGGFQVFG Trigger: CCCAAAGACCTGAAAACCTCCAACCTCACGGACACCCAGCTGGCAGAGGCATACTTGTACCGCTATGGTTACACCCGGGCCGCCCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017881.3 ENSMUST00000137626.2 |
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| CDS CCA 90 bp | AGGTGCTGTCGGCTGTGGTTCAGTTGTGGTGGTGGCTGGAGGCCTTaGGTCAGGCTTAGAGCCACGACCATACAGATACTGGATGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCCRLWFSCGGGWRP*VRLRATTIQILDAV Trigger: GACGGCATCCAGTATCTGTATGGTCGTGGCTCTAAGCCTGACCCAAGGCCTCCAGCCACCACCACAACTGAACCACAGCCGACAGCACCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | TGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAGATTTACAGGAGCCAGAAGGCCGTCCTaGCCGTCGAAGGGATACCCG | + |
|
Preference number: 5 (lower is better) Translates to: WTLGRERSLGSGFSRFTGARRPS*PSKGYP Trigger: CGGGTATCCCTTCGACGGCAAGGACGGCCTTCTGGC...TCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | GCAACCACAGTGAGTGAGTTGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGCAGGAAGAGTACTGCTaGCCCAGGAAGACGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATTVSELDSREREESGVWQEEYC*PRKTKG Trigger: CCCCTTCGTCTTCCTGGGCAAGCAGTACTCTTCCTG...CCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCAACTCACTCACTGTGGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | TGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAGATTTACAGGAGGGATCACGACGCCTTaGCCCAGCGACCACAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: WTLGRERSLGSGFSRFTGGITTP*PSDHNS Trigger: CGAGTTGTGGTCGCTGGGCAAAGGCGTCGTGATCCC...TCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | TGGACTCTCGGGAGAGAGAGGAGTCTGGGGTCTGGTTTCAGCAGATTTACAGGATCGGCTGTGGTTCAGTaGTGGTGGTGGCTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WTLGRERSLGSGFSRFTGSAVVQ*WWWLEA Trigger: GGCCTCCAGCCACCACCACAACTGAACCACAGCCGA...TCCTGTAAATCTGCTGAAACCAGACCCCAGACTCCTCTCTCTCCCGAGAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTGGGCCCAGCACGGTCTaGCCTGTGTACACCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFGPSTV*PVYTHI Trigger: AATGTGGGTGTACACAGGCAAGACCGTGCTGGGCCC...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACCTCCAGACACGCCCCTaGCTGAACAGCAGAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHLQTRP*LNSRAF Trigger: GAAGGCTCTGCTGTTCAGCAAGGGGCGTGTCTGGAG...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 90 bp | CTTTATTCAGAGGGAAGCCCTCGAGGTAGCTATACAGCGGGTACATaGGCGCTTCCGGCACGCTGGAATGATCTAAGCCCAGTGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYSEGSPRGSYTAGT*ALPARWNDLSPVHG Trigger: GCCATGCACTGGGCTTAGATCATTCCAGCGTGCCGGAAGCGCTCATGTACCCGCTGTATAGCTACCTCGAGGGCTTCCCTCTGAATAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GGGCACCATTTGAGTTTCCATAGTAAGTGGGGATCACGACGCCTTTaGCCAGCGACCACAACTCGTCGTCGTCGAAATGGGCATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHHLSFHSKWGSRRL*PATTTRRRRNGHLP Trigger: AGGGAGATGCCCATTTCGACGACGACGAGTTGTGGTCGCTGGGCAAAGGCGTCGTGATCCCCACTTACTATGGAAACTCAAATGGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GGCCTAGACCCAACTTATCCAGACTCCTGGGGCCCAGCACGGTCTTaGCTGTGTACACCCACATTTGACGTCCAGAGAAGAAGAAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GLDPTYPDSWGPARS*LCTPTFDVQRRRKP Trigger: GGGTTTTCTTCTTCTCTGGACGTCAAATGTGGGTGTACACAGGCAAGACCGTGCTGGGCCCCAGGAGTCTGGATAAGTTGGGTCTAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 90 bp | CTGTGTACACCCACATTTGACGTCCAGAGAAGAAGAAAACCCTCTTaGTCTGCGGATCCTCAAAGGCGGAGTCCAGCGTTGCAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCTPTFDVQRRRKPS*SADPQRRSPALQAG Trigger: CCCTGCCTGCAACGCTGGACTCCGCCTTTGAGGATCCGCAGACCAAGAGGGTTTTCTTCTTCTCTGGACGTCAAATGTGGGTGTACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 90 bp | GAGAACTCCTTATCCACGCGAATGACGCTCTGGGGATCCACCTTCTaGGACTTCAAGTCGAATCTCCAGACACGCCCCTTGCTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ENSLSTRMTLWGSTF*DFKSNLQTRPLLNS Trigger: GCTGTTCAGCAAGGGGCGTGTCTGGAGATTCGACTTGAAGTCTCAGAAGGTGGATCCCCAGAGCGTCATTCGCGTGGATAAGGAGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 90 bp | CGTGTGAGTTCCAGGGCACACCAGAGAACTCCTTATCCACGCGAATaGCGCTCTGGGGATCCACCTTCTGAGACTTCAAGTCGAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSSRAHQRTPYPRE*RSGDPPSETSSRIS Trigger: GGAGATTCGACTTGAAGTCTCAGAAGGTGGATCCCCAGAGCGTCATTCGCGTGGATAAGGAGTTCTCTGGTGTGCCCTGGAACTCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | AGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGATGGGGTTTTGGGTGTCCGTGAGGTaGGAGGTTTTCAGGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RDHQSVPGQLAPFPRMGFWVSVR*EVFRSL Trigger: CAAAGACCTGAAAACCTCCAACCTCACGGACACCCA...AAACCCCATCCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | GTCTCTAGAAGAGATCACCAGTCTGTACCTGGCCAGCTAGCACCTTTCCCTCGGTCCCACTTGAGGCCTTaGAAGGTTTGGAATCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRRDHQSVPGQLAPFPRSHLRP*KVWNRP Trigger: GGGTCGATTCCAAACCTTCAAAGGCCTCAAGTGGGA...CCGAGGGAAAGGTGCTAGCTGGCCAGGTACAGACTGGTGATCTCTTCTAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
||
| CDS TCA 90 bp | CACGTGCGGGCAGTAAGGAAGGGGCCCTGTAATGGGCTTCCTCTATaGTTCAGGAACTTCCAGTACCAACCGTCCTTGAAGAAATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVRAVRKGPCNGLPL*FRNFQYQPSLKKCR Trigger: TCTGCATTTCTTCAAGGACGGTTGGTACTGGAAGTTCCTGAATCATAGAGGAAGCCCATTACAGGGCCCCTTCCTTACTGCCCGCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
||
| CDS-3UTR CAA 90 bp | CTCTACCTCTCTAGCACACATGCTGTATACGCATGCTGCAGCTGCCAGCAACCATCAAAAACATCCACATaGCAAGGATTGTCTGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LYLSSTHAVYACCSCQQPSKTST*QGLSAG Trigger: TCCGGCAGACAATCCTTGCAATGTGGATGTTTTTGA...TGGTTGCTGGCAGCTGCAGCATGCGTATACAGCATGTGTGCTAGAGAGGTAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | ACACAGTCTGACCTGAACCATAACGCACAGACCCCCTCTACCTCTCTAGCACACACCTCATGGTCCACCTaGTTCACCTCATTTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TQSDLNHNAQTPSTSLAHTSWST*FTSFWK Trigger: TTTCCAAAATGAGGTGAACAAGGTGGACCATGAGGT...GTGTGCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | GATCTCAGCAATAGCATCAAAAACATCCACATTGCAAGGATTGTCTaGCGGACTCAAAGACTCTGTAGAGGCCTCAGAAGAGCCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLSNSIKNIHIARIV*RTQRLCRGLRRARS Trigger: ACTGCGGGCTCTTCTGAGGCCTCTACAGAGTCTTTGAGTCCGGCAGACAATCCTTGCAATGTGGATGTTTTTGATGCTATTGCTGAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 90 bp | AGGAACTTCCAGTACCAACCGTCCTTGAAGAAATGCAGAGCGCCCTaGATCTCAGCAATAGCATCAAAAACATCCACATTGCAAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RNFQYQPSLKKCRAP*ISAIASKTSTLQGL Trigger: CAATCCTTGCAATGTGGATGTTTTTGATGCTATTGCTGAGATCCAGGGCGCTCTGCATTTCTTCAAGGACGGTTGGTACTGGAAGTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | ATAACCTCATACATAATAAATAAAAGGGCTGGAGTCGGGAGAGGTGGTTTAGCCTATCGTAGTCAGCTGTaGTGCTACACCAAGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSYIINKRAGVGRGGLAYRSQL*CYTKAC Trigger: GCACGCCTTGGTGTAGCACAACAGCTGACTACGATA...GGCTAAACCACCTCTCCCGACTCCAGCCCTTTTATTTATTATGTATGAGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | TCTCAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTGAACAGGCTGTACCCTaGGTCTGGACAGAAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTPHKNKRSESTLQSCLEQAVP*VWTETP Trigger: TGGGGTTTCTGTCCAGACCAAGGGTACAGCCTGTTC...AAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 90 bp | CCACCTTGTTCACCTCATTTTGGAAACTCACACGCCAGAAGAATTTaGCATGGCAGAAATAGGCTTTGTCTTGGTACTGGAAGATGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PPCSPHFGNSHARRI*HGRNRLCLGTGRCR Trigger: ACGACATCTTCCAGTACCAAGACAAAGCCTATTTCTGCCATGGCAAATTCTTCTGGCGTGTGAGTTTCCAAAATGAGGTGAACAAGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS-3UTR CAA 90 bp | CAGACGCCACACAAAAATAAAAGGTCAGAATCCACCCTACAAAGTTGTCTTCTTGAAATAGGCTTTGTCTaGGTACTGGAAGATGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTPHKNKRSESTLQSCLLEIGFV*VLEDVV Trigger: CACGACATCTTCCAGTACCAAGACAAAGCCTATTTC...AAGAAGACAACTTTGTAGGGTGGATTCTGACCTTTTATTTTTGTGTGGCGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | CGCTTCGGGTCCGTACACGCGGGTGAAGGTGAGGGGTaGCACCTCGCCCCACACCGCGAAGGCGCGCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RFGSVHAGEGEG*HLAPHREGARE Trigger: TTCGCGCGCGCCTTCGCGGTGTGGGGCGAGGTGGCACCCCTCACCTTCACCCGCGTGTACGGACCCGAAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | CGCCAGGGGGAAAGGCGTGTGCCAGAAGGCCGTCCTTaGCGTCGAAGGGATACCCGTCTCCGTGCTCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RQGERRVPEGRP*RRRDTRLRAPR Trigger: TCGCGGAGCACGGAGACGGGTATCCCTTCGACGGCAAGGACGGCCTTCTGGCACACGCCTTTCCCCCTGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | ATCTCCCTGAACGCCGGCGCCAGGGGGAAAGGCGTGTaGCAGAAGGCCGTCCTTGCCGTCGAAGGGATACCC | + |
|
Preference number: 6 (lower is better) Translates to: ISLNAGARGKGV*QKAVLAVEGIP Trigger: GGGTATCCCTTCGACGGCAAGGACGGCCTTCTGGCACACGCCTTTCCCCCTGGCGCCGGCGTTCAGGGAGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | GCCCAGGAAGACGAAGGGGAAGACGCACAGCTCTCCTaGCGAGTTGCCCCCAACTACGGTCGCGTCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: AQEDEGEDAQLS*RVAPNYGRVHS Trigger: CGAGTGGACGCGACCGTAGTTGGGGGCAACTCGGCAGGAGAGCTGTGCGTCTTCCCCTTCGTCTTCCTGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | TCGCACACCAGAGGCGCCCATCCCTGCGGCCGTCGCTaGTACAGGAAGAGTACTGCTTGCCCAGGAAGACGA | + |
|
Preference number: 6 (lower is better) Translates to: SHTRGAHPCGRR*YRKSTACPGRR Trigger: TCGTCTTCCTGGGCAAGCAGTACTCTTCCTGTACCAGCGACGGCCGCAGGGATGGGCGCCTCTGGTGTGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | CTGGGCGGCCCGGGTGTAACCATAGCGGTACAAGTATaGCTCTGCCAGCTGGGTGTCCGTGAGGTTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGGPGVTIAVQV*LCQLGVREVGG Trigger: ACCTCCAACCTCACGGACACCCAGCTGGCAGAGGCATACTTGTACCGCTATGGTTACACCCGGGCCGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017881.3 ENSMUST00000137626.2 |
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| CDS GCA 72 bp | AGTCAGCTGTTGTGCTACACCAAGGCGTGCCGTCGTTaGGGCCGTCTGTGGTGCAGGCCGAATAGGAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQLLCYTKACRR*GRLWCRPNRSV Trigger: GACGCTCCTATTCGGCCTGCACCACAGACGGCCGCAACGACGGCACGCCTTGGTGTAGCACAACAGCTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | CCCTGCGGCCGTCGCTGGTACAGGAAGAGTACTGCTTaGCCAGGAAGACGAAGGGGAAGACGCACAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PCGRRWYRKSTA*PGRRRGRRTAL Trigger: GAGAGCTGTGCGTCTTCCCCTTCGTCTTCCTGGGCAAGCAGTACTCTTCCTGTACCAGCGACGGCCGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | GCCTTCCCGAGACGACGCGGGAGAAGCCCGCTGACGTaGGTTACCTCTGGGCCTAGACCCAACTTATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AFPRRRGRSPLT*VTSGPRPNLSR Trigger: TCTGGATAAGTTGGGTCTAGGCCCAGAGGTAACCCACGTCAGCGGGCTTCTCCCGCGTCGTCTCGGGAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | GGCCGTGGGAGGTATAGTGGGACACATAGTGGGAGGTaGTGTCGGCTGTGGTTCAGTTGTGGTGGTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGRYSGTHSGR*CRLWFSCGGGW Trigger: CCAGCCACCACCACAACTGAACCACAGCCGACAGCACCTCCCACTATGTGTCCCACTATACCTCCCACGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | AAGGGATACCCGTCTCCGTGCTCCGCGACACCAAACTaGATGACAATGTCCGCTTCGGGTCCGTACACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KGYPSPCSATPN*MTMSASGPYTR Trigger: CCGCGTGTACGGACCCGAAGCGGACATTGTCATCCAGTTTGGTGTCGCGGAGCACGGAGACGGGTATCCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | TACAGCGGGTACATGAGCGCTTCCGGCACGCTGGAATaGTCTAAGCCCAGTGCATGGCCGAACTCGTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: YSGYMSASGTLE*SKPSAWPNSCA Trigger: AGCGCACGAGTTCGGCCATGCACTGGGCTTAGATCATTCCAGCGTGCCGGAAGCGCTCATGTACCCGCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | GAGGGAAGCCCTCGAGGTAGCTATACAGCGGGTACATaGGCGCTTCCGGCACGCTGGAATGATCTAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGSPRGSYTAGT*ALPARWNDLSP Trigger: TGGGCTTAGATCATTCCAGCGTGCCGGAAGCGCTCATGTACCCGCTGTATAGCTACCTCGAGGGCTTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | GGCCCGGGTGTAACCATAGCGGTACAAGTATGCCTCTaGCAGCTGGGTGTCCGTGAGGTTGGAGGTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGVTIAVQVCL*QLGVREVGGFQ Trigger: CTGAAAACCTCCAACCTCACGGACACCCAGCTGGCAGAGGCATACTTGTACCGCTATGGTTACACCCGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017881.3 ENSMUST00000137626.2 |
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| CDS CCA 72 bp | GACCCACGTCTGGGACACCACAGCGTGGTGTTCGAATaGCCTTTAGTGTCTGGCTGTCCAGCTCACCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DPRLGHHSVVFE*PLVSGCPAHQS Trigger: AGACTGGTGAGCTGGACAGCCAGACACTAAAGGCCATTCGAACACCACGCTGTGGTGTCCCAGACGTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | CGGCTGTGGTTCAGTTGTGGTGGTGGCTGGAGGCCTTaGGTCAGGCTTAGAGCCACGACCATACAGATACTG | + |
|
Preference number: 6 (lower is better) Translates to: RLWFSCGGGWRP*VRLRATTIQIL Trigger: CAGTATCTGTATGGTCGTGGCTCTAAGCCTGACCCAAGGCCTCCAGCCACCACCACAACTGAACCACAGCCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | TTACCTCTGGGCCTAGACCCAACTTATCCAGACTCCTaGGGCCCAGCACGGTCTTGCCTGTGTACACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPLGLDPTYPDS*GPARSCLCTPT Trigger: TGTGGGTGTACACAGGCAAGACCGTGCTGGGCCCCAGGAGTCTGGATAAGTTGGGTCTAGGCCCAGAGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 90 bp | CAGACTCCTGGGGCCCAGCACGGTCTTGCCTGTGTACACCCACATTaGACGTCCAGAGAAGAAGAAAACCCTCTTGGTCTGCGGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QTPGAQHGLACVHPH*TSREEENPLGLRIL Trigger: GAGGATCCGCAGACCAAGAGGGTTTTCTTCTTCTCTGGACGTCAAATGTGGGTGTACACAGGCAAGACCGTGCTGGGCCCCAGGAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | AGCGGTACAAGTATGCCTCTGCCAGCTGGGTGTCCGTaGGGTTGGAGGTTTTCAGGTCTTTGGGGAAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SGTSMPLPAGCP*GWRFSGLWGRP Trigger: TGGTCTTCCCCAAAGACCTGAAAACCTCCAACCTCACGGACACCCAGCTGGCAGAGGCATACTTGTACCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017881.3 ENSMUST00000137626.2 |
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| CDS TCA 72 bp | GGGCCCAGCACGGTCTTGCCTGTGTACACCCACATTTaGCGTCCAGAGAAGAAGAAAACCCTCTTGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPSTVLPVYTHI*RPEKKKTLLVC Trigger: GCAGACCAAGAGGGTTTTCTTCTTCTCTGGACGTCAAATGTGGGTGTACACAGGCAAGACCGTGCTGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | CCAACTTATCCAGACTCCTGGGGCCCAGCACGGTCTTaGCTGTGTACACCCACATTTGACGTCCAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTYPDSWGPARS*LCTPTFDVQRR Trigger: TCTTCTCTGGACGTCAAATGTGGGTGTACACAGGCAAGACCGTGCTGGGCCCCAGGAGTCTGGATAAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | TTATCCACGCGAATGACGCTCTGGGGATCCACCTTCTaGGACTTCAAGTCGAATCTCCAGACACGCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRMTLWGSTF*DFKSNLQTRPL Trigger: CAAGGGGCGTGTCTGGAGATTCGACTTGAAGTCTCAGAAGGTGGATCCCCAGAGCGTCATTCGCGTGGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | TCCAGGGCACACCAGAGAACTCCTTATCCACGCGAATaGCGCTCTGGGGATCCACCTTCTGAGACTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRAHQRTPYPRE*RSGDPPSETSS Trigger: ACTTGAAGTCTCAGAAGGTGGATCCCCAGAGCGTCATTCGCGTGGATAAGGAGTTCTCTGGTGTGCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | TTGAGTTTCCATAGTAAGTGGGGATCACGACGCCTTTaGCCAGCGACCACAACTCGTCGTCGTCGAAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSFHSKWGSRRL*PATTTRRRRNG Trigger: CCCATTTCGACGACGACGAGTTGTGGTCGCTGGGCAAAGGCGTCGTGATCCCCACTTACTATGGAAACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | CCCACATTTGACGTCCAGAGAAGAAGAAAACCCTCTTaGTCTGCGGATCCTCAAAGGCGGAGTCCAGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTFDVQRRRKPS*SADPQRRSPAL Trigger: CAACGCTGGACTCCGCCTTTGAGGATCCGCAGACCAAGAGGGTTTTCTTCTTCTCTGGACGTCAAATGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 72 bp | AGGCTGTACCCTTGGTCTGGACAGAAACCCCACTTCTaGTCAGTGTCGAAGTTCGATGTGGTCGCACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLYPWSGQKPHF*SVSKFDVVAHQ Trigger: CTGGTGTGCGACCACATCGAACTTCGACACTGACAAGAAGTGGGGTTTCTGTCCAGACCAAGGGTACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | GCAGTAAGGAAGGGGCCCTGTAATGGGCTTCCTCTATaGTTCAGGAACTTCCAGTACCAACCGTCCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVRKGPCNGLPL*FRNFQYQPSLK Trigger: CTTCAAGGACGGTTGGTACTGGAAGTTCCTGAATCATAGAGGAAGCCCATTACAGGGCCCCTTCCTTACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 72 bp | TACAAGTATGCCTCTGCCAGCTGGGTGTCCGTGAGGTaGGAGGTTTTCAGGTCTTTGGGGAAGACCACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: YKYASASWVSVR*EVFRSLGKTTK Trigger: TTTTGTGGTCTTCCCCAAAGACCTGAAAACCTCCAACCTCACGGACACCCAGCTGGCAGAGGCATACTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017881.3 ENSMUST00000137626.2 |
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| CDS CAA 90 bp | TGCAGAGCGCCCTGGATCTCAGCAATAGCATCAAAAACATCCACATaGCAAGGATTGTCTGCCGGACTCAAAGACTCTGTAGAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRAPWISAIASKTST*QGLSAGLKDSVEAS Trigger: TGAGGCCTCTACAGAGTCTTTGAGTCCGGCAGACAATCCTTGCAATGTGGATGTTTTTGATGCTATTGCTGAGATCCAGGGCGCTCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 90 bp | GTCGTCCACCTGGTTCACCTCATGGTCCACCTTGTTCACCTCATTTaGGAAACTCACACGCCAGAAGAATTTGCCATGGCAGAAATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVHLVHLMVHLVHLI*ETHTPEEFAMAEIG Trigger: GCCTATTTCTGCCATGGCAAATTCTTCTGGCGTGTGAGTTTCCAAAATGAGGTGAACAAGGTGGACCATGAGGTGAACCAGGTGGACGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS TCA 72 bp | CTCGAAGGTGAAGGGAAAGTGACATGGGGCACCATTTaGGTTTCCATAGTAAGTGGGGATCACGACGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LEGEGKVTWGTI*VSIVSGDHDAF Trigger: AAAGGCGTCGTGATCCCCACTTACTATGGAAACTCAAATGGTGCCCCATGTCACTTTCCCTTCACCTTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 90 bp | GAAGGCGTCATCGATCATGTCTCGCGGCAAGTCTTCAGAGTAGTTTaGGATCCAGTATGTGATGTTATGATGGTCCCACTTGAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EGVIDHVSRQVFRVV*DPVCDVMMVPLEAF Trigger: AAAGGCCTCAAGTGGGACCATCATAACATCACATACTGGATCCAAAACTACTCTGAAGACTTGCCGCGAGACATGATCGATGACGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | TTCAGGAACTTCCAGTACCAACCGTCCTTGAAGAAATaGAGAGCGCCCTGGATCTCAGCAATAGCATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FRNFQYQPSLKK*RAPWISAIASK Trigger: TTTTGATGCTATTGCTGAGATCCAGGGCGCTCTGCATTTCTTCAAGGACGGTTGGTACTGGAAGTTCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CCA 72 bp | CAGTACCAACCGTCCTTGAAGAAATGCAGAGCGCCCTaGATCTCAGCAATAGCATCAAAAACATCCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: QYQPSLKKCRAP*ISAIASKTSTL Trigger: CAATGTGGATGTTTTTGATGCTATTGCTGAGATCCAGGGCGCTCTGCATTTCTTCAAGGACGGTTGGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 72 bp | CCCTGGATCTCAGCAATAGCATCAAAAACATCCACATaGCAAGGATTGTCTGCCGGACTCAAAGACTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PWISAIASKTST*QGLSAGLKDSV Trigger: TACAGAGTCTTTGAGTCCGGCAGACAATCCTTGCAATGTGGATGTTTTTGATGCTATTGCTGAGATCCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | AATAGCATCAAAAACATCCACATTGCAAGGATTGTCTaGCGGACTCAAAGACTCTGTAGAGGCCTCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NSIKNIHIARIV*RTQRLCRGLRR Trigger: TCTTCTGAGGCCTCTACAGAGTCTTTGAGTCCGGCAGACAATCCTTGCAATGTGGATGTTTTTGATGCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS GCA 72 bp | TCACCTCATTTTGGAAACTCACACGCCAGAAGAATTTaGCATGGCAGAAATAGGCTTTGTCTTGGTACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPHFGNSHARRI*HGRNRLCLGTG Trigger: TCCAGTACCAAGACAAAGCCTATTTCTGCCATGGCAAATTCTTCTGGCGTGTGAGTTTCCAAAATGAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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| CDS CAA 72 bp | ATCGATCATGTCTCGCGGCAAGTCTTCAGAGTAGTTTaGGATCCAGTATGTGATGTTATGATGGTCCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: IDHVSRQVFRVV*DPVCDVMMVPL Trigger: AAGTGGGACCATCATAACATCACATACTGGATCCAAAACTACTCTGAAGACTTGCCGCGAGACATGATCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017881.3 |
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