Pregenerated sensors for MMP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005800Ensembl transcript IDs: ENSMUST00000018765.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAGAGTTAGTTACCACTaGGGAAAGTCTGGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LFYHVPIPLLILPKSPQNRVSYH*GKSGQD Trigger: GTCCTGCCCAGACTTTCCTCAGTGGTAACTAACTCT...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGCAGCCCTCCAGTGTCTaGTTCTCTTTGCTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KTHINKCLNSGMCLRKEWQPSSV*FSLLGL Trigger: GAGACCAAGCAAAGAGAACCAGACACTGGAGGGCTG...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTAGGCTTGCTCTCTTTGTaGTGCATTCACGAACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: WLILTLFKAVLSFTHNSLGLLSL*CIHEPG Trigger: CCCTGGTTCGTGAATGCATCACAAAGAGAGCAAGCC...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAAGGAGTTAGCCATGGCTaGGAATGCCAGATTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: FYHVPIPLLILPKSPQNKGVSHG*ECQITN Trigger: GTTTGTAATCTGGCATTCCCAGCCATGGCTAACTCC...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGGCATGCAGAGGGGCATaGTTCAACACACATTACATA | + |
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Preference number: 2 (lower is better) Translates to: KTHINKCLNSGMCLRKEWACRGA*FNTHYI Trigger: TATGTAATGTGTGTTGAATCATGCCCCTCTGCATGC...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTAAGCCATGGCTGGGAATaGCAGATTACAAACGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: WLILTLFKAVLSFTHNSLSHGWE*QITNAG Trigger: ACCAGCGTTTGTAATCTGGCATTCCCAGCCATGGCT...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR GCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGGTGTCTGGTTCTCTTTaGTTGGTCTCTTCTATCATG | + |
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Preference number: 2 (lower is better) Translates to: KTHINKCLNSGMCLRKEWVSGSL*LVSSIM Trigger: CATGATAGAAGAGACCAAGCAAAGAGAACCAGACAC...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTATTTGTCCTCATAGGGTaGGTGCAAGGACATTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: WLILTLFKAVLSFTHNSLFVLIG*VQGHLT Trigger: TGTCAAATGTCCTTGCACGCACCCTATGAGGACAAA...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR TCA 72 bp | AAGTCTGGGCAGGACACGTGGGATGAGTATACAGACTaGGCTTCCCTTTTTGTCCTCATAGGGTGCGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: KSGQDTWDEYTD*ASLFVLIGCVQ Trigger: TTGCACGCACCCTATGAGGACAAAAAGGGAAGCTCAGTCTGTATACTCATCCCACGTGTCCTGCCCAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR GCA 72 bp | ACGGAATATGCAGAAGGAGTTAGCCATGGCTGGGAATaGCAGATTACAAACGCTGGTTCTTCGAAGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: TEYAEGVSHGWE*QITNAGSSKRA Trigger: AGCCCTCTTCGAAGAACCAGCGTTTGTAATCTGGCATTCCCAGCCATGGCTAACTCCTTCTGCATATTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR TCA 72 bp | TTACCACTGAGGAAAGTCTGGGCAGGACACGTGGGATaGGTATACAGACTGAGCTTCCCTTTTTGTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LPLRKVWAGHVG*VYRLSFPFCPH Trigger: ATGAGGACAAAAAGGGAAGCTCAGTCTGTATACTCATCCCACGTGTCCTGCCCAGACTTTCCTCAGTGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR GCA 72 bp | ATTTATAGATACAGCCCTCCAGTGTCTGGTTCTCTTTaGTTGGTCTCTTCTATCATGTGCCCATACCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: IYRYSPPVSGSL*LVSSIMCPYLC Trigger: GCAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGAGGGCTGTATCTATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR TCA 72 bp | TGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGCTaGTTCTTCCCAAATCTCCTCAGAATAAAACATGTT | + |
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Preference number: 3 (lower is better) Translates to: CLVSSIMCPYLC*FFPNLLRIKHV Trigger: AACATGTTTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAGACCAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGCTGCCTGGGAACTTATaGGCAAATAGATTTATAGAT | + |
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Preference number: 3 (lower is better) Translates to: SQKTHINKCLNSGMCLRKLPGNL*ANRFID Trigger: ATCTATAAATCTATTTGCCAATAAGTTCCCAGGCAG...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGTCAACTGTTCTCAGCTaGGGATGCCGTCTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLSTVLS*GCRLQK Trigger: CTTCTGGAGACGGCATCCTCAGCTGAGAACAGTTGA...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGATACCTTGGCCTGGTTaGAAGGCATGGGCAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLIPWPG*KAWARI Trigger: AATCCTTGCCCATGCCTTTCAACCAGGCCAAGGTAT...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATGCATCAAATCTCAGGTaGGGGTCACAGGCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFYHVPIPLLILPKSPQNASNLR*GSQALG Trigger: ACCCAAAGCCTGTGACCCCCACCTGAGATTTGATGC...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGTTACTCCTGGGAACATaGTTGGTATGCTTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLLLLGT*LVCFWG Trigger: ACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAA...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGTTGGCAAGCTGTGTGTaGAGGAAGATCAGTAATGGA | + |
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Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLLASCV*RKISNG Trigger: TCCATTACTGATCTTCCTCCACACACAGCTTGCCAA...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGTACTGGGAAGGCATTaGCAAGCTGTGTGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKVLGRH*QAVCGG Trigger: TCCTCCACACACAGCTTGCCAATGCCTTCCCAGTAC...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGCAGCCTGAAGACCGTTaGGTAGGAAGGGCCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: KTHINKCLNSGMCLRKEWQPEDR*VGRART Trigger: TGTTCTGGCCCTTCCTACCCAACGGTCTTCAGGCTG...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGTTTCACTTCAGCCCTTaGCAGCTGTGGCGTATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKFHFSP*QLWRMV Trigger: AACCATACGCCACAGCTGTCAAGGGCTGAAGTGAAA...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGGTTATAGGAAACAGCTaGATCAATGGCTTGGACACT | + |
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Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLVIGNS*INGLDT Trigger: AGTGTCCAAGCCATTGATGCAGCTGTTTCCTATAAC...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGCAGGTGTTCAGGTACTaGGAAGGCATTGGCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KTHINKCLNSGMCLRKEWQVFRY*EGIGKL Trigger: CAGCTTGCCAATGCCTTCCCAGTACCTGAACACCTG...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | CCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGATCCAATACCTTGGCCTaGTTGAAAGGCATGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PENPYQQVPQFWNVLEKGSNTLA*LKGMGK Trigger: CTTGCCCATGCCTTTCAACCAGGCCAAGGTATTGGA...TCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATCCTGTAAGCATAGTTTaGGTACATCAAGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFYHVPIPLLILPKSPQNPVSIV*VHQGTR Trigger: CCTGGTGCCTTGATGTACCCAAACTATGCTTACAGG...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGGAACATGCTTGGTATaGTTTTGGGGTAACCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKGTCLV*FWGNLG Trigger: ACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCC...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAATGCTTGGTATGCTTTTaGGGTAACCTGGGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: FYHVPIPLLILPKSPQNKCLVCF*GNLGPW Trigger: CCATGGACCCAGGTTACCCCAAAAGCATACCAAGCA...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGTCCTGGGAACATGCTTaGTATGCTTTTGGGGTAACC | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKSWEHA*YAFGVT Trigger: GGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGA...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGTCCAAATTCATaGGCAGCCACGAGAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKECPNS*AATRNR Trigger: CCTATTTCTCGTGGCTGCTCATGAATTTGGACATTC...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAATATTGTGGTCCACTaGAGAAGAGGAAGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LFYHVPIPLLILPKSPQNNIVVH*RRGRRS Trigger: ACTCCTTCTTCCTCTTCTTCAGTGGACCACAATATT...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGACTCTAGTGACTCTGTaGCTGACAAAATTAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLTLVTL*LTKLNA Trigger: TGCATTTAATTTTGTCAGTCACAGAGTCACTAGAGT...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATATTGGGTCCATCAAATaGAGAATTGTCACCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LFYHVPIPLLILPKSPQNIGSIK*RIVTMV Trigger: GACCATGGTGACAATTCTCCATTTGATGGACCCAAT...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTACCAGGATCAGTGGAGTaGGAGAGTCCCAAAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: WLILTLFKAVLSFTHNSLPGSVE*ESPKEC Trigger: ACATTCTTTGGGACTCTCTCACTCCACTGATCCTGG...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAAGGAGAATTGTCACCATaGTCTCTTGAGACGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FYHVPIPLLILPKSPQNKGELSP*SLETKA Trigger: TGCTTTCGTCTCAAGAGACCATGGTGACAATTCTCC...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAAGGGCAAGGATTCCATTaGGTCCATCAAATGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FYHVPIPLLILPKSPQNKGQGFH*VHQMEN Trigger: ATTCTCCATTTGATGGACCCAATGGAATCCTTGCCC...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGTCCATGGATCTTCTTTaGTTGTCATATCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KTHINKCLNSGMCLRKEWSMDLL*LSYLQH Trigger: GTGCTGGAGATATGACAATCAAAGAAGATCCATGGA...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTAGAGGTAGTGAATAGGTaGTGGGTTCCCTGTAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: WLILTLFKAVLSFTHNSLEVVNR*WVPCKH Trigger: ATGCTTACAGGGAACCCAGCACCTATTCACTACCTC...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGTTGGGAATCCATAGTTaGATATATCTCTGGGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKLGIHS*IYLWGN Trigger: GTTACCCCAGAGATATATCCAACTATGGATTCCCAA...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR TCA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGTTGTCTGAATGCCATTaGTATCATCTTGAGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: KTHINKCLNSGMCLRKEWLSECH*YHLEVV Trigger: CACTACCTCAAGATGATATCAATGGCATTCAGACAA...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTACTCTTTAAGCTTCTCTaGAACCATCGTGGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: WLILTLFKAVLSFTHNSLLFKLL*NHRGIP Trigger: AGGAATGCCACGATGGTTGCAGAGAAGCTTAAAGAG...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGAAAAGCTTTCTCAATTaGTGTTTTCACTTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKKSFLN*CFHFSP Trigger: AGGGCTGAAGTGAAAACAGCAATTGAGAAAGCTTTT...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR GCA 90 bp | AGCCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGAAGACCGGAATTGATTaGTTGGTAAGTTGTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: SQKTHINKCLNSGMCLRKKTGID*LVSCRI Trigger: AATTCTACAACTTACCAAGCAATCAATTCCGGTCTT...CTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 90 bp | CAATGGCTTGGACACTCCTTGGGAATCCATAGTTGGATATATCTCTaGGGTAACCTTGCTGCAGGTCATAGCCACTTAGAGCCCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: QWLGHSLGIHSWIYL*GNLAAGHSHLEPST Trigger: AGTACTGGGCTCTAAGTGGCTATGACCTGCAGCAAGGTTACCCCAGAGATATATCCAACTATGGATTCCCAAGGAGTGTCCAAGCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGAATACCTTGGCCTGGTaGAAAGGCATGGGCAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLNTLAW*KGMGKD Trigger: ATCCTTGCCCATGCCTTTCAACCAGGCCAAGGTATT...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAAGGTACTGGGAAGGCATaGGCAAGCTGTGTGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FYHVPIPLLILPKSPQNKGTGKA*ASCVWR Trigger: CCTCCACACACAGCTTGCCAATGCCTTCCCAGTACC...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | CTCTTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATCCCTGTAAGCATAGTTaGGGTACATCAAGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFYHVPIPLLILPKSPQNPCKHS*GTSRHQ Trigger: CTGGTGCCTTGATGTACCCAAACTATGCTTACAGGG...ATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 90 bp | ACAGTTTACTCCTGGGAACATGCTTGGTATGCTTTTGGGGTAACCTaGGTCCATGGATCTTCTTTGATTGTCATATCTCCAGCACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVYSWEHAWYAFGVT*VHGSSLIVISPALV Trigger: AACCAGTGCTGGAGATATGACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAATTAGTGTGTGTCCACTaGGGACTTCCTGGGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FYHVPIPLLILPKSPQNKLVCVH*GLPGVS Trigger: GCTAACCCCAGGAAGTCCCAAGTGGACACACACTAA...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGATCTCTGGGGTAACCTaGCTGCAGGTCATAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KTHINKCLNSGMCLRKEWISGVT*LQVIAT Trigger: AGTGGCTATGACCTGCAGCAAGGTTACCCCAGAGAT...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS TCA 90 bp | CCAGACGTGAAAAGCTTTCTCAATTGCTGTTTTCACTTCAGCCCTTaGCAGCTGTGGCGTATGGTTTATAATCCTGTAGGTCAGGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PDVKSFLNCCFHFSP*QLWRMVYNPVGQVS Trigger: ACTAACCTGACCTACAGGATTATAAACCATACGCCACAGCTGTCAAGGGCTGAAGTGAAAACAGCAATTGAGAAAGCTTTTCACGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 90 bp | AATGCAAAATATTGTGGTCCACTGAAGAAGAGGAAGAAGGAGTCCTaGAGGAAAACTGCATCGACTCTACAGTTTACTCCTGGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: NAKYCGPLKKRKKES*RKTASTLQFTPGNM Trigger: CATGTTCCCAGGAGTAAACTGTAGAGTCGATGCAGTTTTCCTGCAGGACTCCTTCTTCCTCTTCTTCAGTGGACCACAATATTTTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGAACAGAGATATGAAATaGAGGTCAACTGTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLNRDMK*RSTVLS Trigger: GCTGAGAACAGTTGACCTCAATTTCATATCTCTGTT...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTCTGGTTCTCTTTGCTTGGTCTCTTCTATCATGTGCCCATACCTCTGTATCTCCAGCACTGGTaGTTTATGAAGAAGTATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVWFSLLGLFYHVPIPLYLQHW*FMKKYV Trigger: GACATACTTCTTCATAAACAACCAGTGCTGGAGATA...CAGAGGTATGGGCACATGATAGAAGAGACCAAGCAAAGAGAACCAGACACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TTCTATCATGTGCCCATACCTCTGCTGATTCTTCCCAAATCTCCTCAGAATAAACTCCTGGGAACATGCTaGGTATGCTTTTGGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FYHVPIPLLILPKSPQNKLLGTC*VCFWGN Trigger: GTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAG...TTTATTCTGAGGAGATTTGGGAAGAATCAGCAGAGGTATGGGCACATGATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 90 bp | GCTTCTCTGCAACCATCGTGGCATTCCTCGAAGACCGGAATTGATTaGTTGGTAAGTTGTAGAATTTTCGTAGGTAATTCTCAGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLQPSWHSSKTGID*LVSCRIFVGNSQQF Trigger: AAACTGCTGAGAATTACCTACGAAAATTCTACAACTTACCAAGCAATCAATTCCGGTCTTCGAGGAATGCCACGATGGTTGCAGAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGGAGACGAAAGCAATGTaGATGTCTGCTTCTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KTHINKCLNSGMCLRKEWETKAM*MSASPC Trigger: ACAGGGAGAAGCAGACATCAACATTGCTTTCGTCTC...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | AAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAATGGTGGCTTGGACACTCCTaGGGAATCCATAGTTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KTHINKCLNSGMCLRKEWWLGHS*GIHSWI Trigger: TATCCAACTATGGATTCCCAAGGAGTGTCCAAGCCA...CCATTCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 90 bp | CTGGTTGTTTATGAAGAAGTATGTCTTCCCGTTATAGGAAACAGCTaGATCAATGGCTTGGACACTCCTTGGGAATCCATAGTTGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: LVVYEEVCLPVIGNS*INGLDTPWESIVGY Trigger: ATATCCAACTATGGATTCCCAAGGAGTGTCCAAGCCATTGATGCAGCTGTTTCCTATAACGGGAAGACATACTTCTTCATAAACAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGACAGTTAAGCCATAAATaGCTTCTTGCAACTCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PENPYQQVPQFWNVLEKGQLSHK*LLATLV Trigger: CACTAGAGTTGCAAGAAGCAATTTATGGCTTAACTG...TCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | CCAGAAAACCCATATCAACAAGTGCCTCAATTCTGGAATGTGCTTGAGAAAGGAACCGGAATTGATTGCTaGGTAAGTTGTAGAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PENPYQQVPQFWNVLEKGTGIDC*VSCRIF Trigger: GAAAATTCTACAACTTACCAAGCAATCAATTCCGGT...TCCTTTCTCAAGCACATTCCAGAATTGAGGCACTTGTTGATATGGGTTTTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTAGAAAAGCTTTCTCAATaGCTGTTTTCACTTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLILTLFKAVLSFTHNSLEKLSQ*LFSLQP Trigger: GGGCTGAAGTGAAAACAGCAATTGAGAAAGCTTTTC...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS-3UTR CAA 90 bp | TGGCTCATCCTAACCCTGTTTAAGGCTGTCTTGTCATTTACACATAATTCATTAGTCCATGGATCTTCTTaGATTGTCATATCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WLILTLFKAVLSFTHNSLVHGSS*IVISPA Trigger: TGCTGGAGATATGACAATCAAAGAAGATCCATGGAC...TAATGAATTATGTGTAAATGACAAGACAGCCTTAAACAGGGTTAGGATGAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS TCA 72 bp | GGGTGTGCTGGGCCCAGTAGGTTGGATGGGGTTGTCTaGAGGTCCATAGATTGTCTGAATGCCATTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: GCAGPSRLDGVV*RSIDCLNAIDI Trigger: GATATCAATGGCATTCAGACAATCTATGGACCTTCAGACAACCCCATCCAACCTACTGGGCCCAGCACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS TCA 72 bp | TCGGTGAAGGTCAGGGGCGATGCTACACTCCAGACGTaGAAAGCTTTCTCAATTGCTGTTTTCACTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVKVRGDATLQT*KAFSIAVFTSA Trigger: GGCTGAAGTGAAAACAGCAATTGAGAAAGCTTTTCACGTCTGGAGTGTAGCATCGCCCCTGACCTTCACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | TGTTCAGGTACTGGGAAGGCATTGGCAAGCTGTGTGTaGAGGAAGATCAGTAATGGAAGTGTCTTCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CSGTGKALASCV*RKISNGSVFRR Trigger: TCGCCTGAAGACACTTCCATTACTGATCTTCCTCCACACACAGCTTGCCAATGCCTTCCCAGTACCTGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 72 bp | GTAGTGAATAGGTGCTGGGTTCCCTGTAAGCATAGTTaGGGTACATCAAGGCACCAGGATCAGTGGAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VVNRCWVPCKHS*GTSRHQDQWSE Trigger: CTCACTCCACTGATCCTGGTGCCTTGATGTACCCAAACTATGCTTACAGGGAACCCAGCACCTATTCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 72 bp | AAACTGCATCGACTCTACAGTTTACTCCTGGGAACATaGTTGGTATGCTTTTGGGGTAACCTGGGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KLHRLYSLLLGT*LVCFWGNLGPW Trigger: CCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAAACTGTAGAGTCGATGCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | TGCATCGACTCTACAGTTTACTCCTGGGAACATGCTTaGTATGCTTTTGGGGTAACCTGGGTCCATGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: CIDSTVYSWEHA*YAFGVTWVHGS Trigger: AGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAAACTGTAGAGTCGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 90 bp | TCAAATGGAGAATTGTCACCATGGTCTCTTGAGACGAAAGCAATGTaGATGTCTGCTTCTCCCTGTAAGATCTCGGTGAAGGTCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SNGELSPWSLETKAM*MSASPCKISVKVRG Trigger: GCCCCTGACCTTCACCGAGATCTTACAGGGAGAAGCAGACATCAACATTGCTTTCGTCTCAAGAGACCATGGTGACAATTCTCCATTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 72 bp | CGACTCTACAGTTTACTCCTGGGAACATGCTTGGTATaGTTTTGGGGTAACCTGGGTCCATGGATCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLYSLLLGTCLV*FWGNLGPWIFF Trigger: AAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAAACTGTAGAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | CATCAATGGCTTGGACACTCCTTGGGAATCCATAGTTaGATATATCTCTGGGGTAACCTTGCTGCAGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HQWLGHSLGIHS*IYLWGNLAAGH Trigger: ATGACCTGCAGCAAGGTTACCCCAGAGATATATCCAACTATGGATTCCCAAGGAGTGTCCAAGCCATTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 72 bp | TTTTTCTCTTCCAGGTGTTCAGGTACTGGGAAGGCATaGGCAAGCTGTGTGTGGAGGAAGATCAGTAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: FFSSRCSGTGKA*ASCVWRKISNG Trigger: TCCATTACTGATCTTCCTCCACACACAGCTTGCCAATGCCTTCCCAGTACCTGAACACCTGGAAGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | ACATGCTTGGTATGCTTTTGGGGTAACCTGGGTCCATaGATCTTCTTTGATTGTCATATCTCCAGCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TCLVCFWGNLGP*IFFDCHISSTG Trigger: ACCAGTGCTGGAGATATGACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | TCCTGGGAACATGCTTGGTATGCTTTTGGGGTAACCTaGGTCCATGGATCTTCTTTGATTGTCATATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SWEHAWYAFGVT*VHGSSLIVISP Trigger: TGGAGATATGACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 72 bp | GAATTGTCACCATGGTCTCTTGAGACGAAAGCAATGTaGATGTCTGCTTCTCCCTGTAAGATCTCGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ELSPWSLETKAM*MSASPCKISVK Trigger: CTTCACCGAGATCTTACAGGGAGAAGCAGACATCAACATTGCTTTCGTCTCAAGAGACCATGGTGACAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 90 bp | GAAGAAGTATGTCTTCCCGTTATAGGAAACAGCTGCATCAATGGCTaGGACACTCCTTGGGAATCCATAGTTGGATATATCTCTGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EEVCLPVIGNSCING*DTPWESIVGYISGV Trigger: TACCCCAGAGATATATCCAACTATGGATTCCCAAGGAGTGTCCAAGCCATTGATGCAGCTGTTTCCTATAACGGGAAGACATACTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | TACAGTTTACTCCTGGGAACATGCTTGGTATGCTTTTaGGGTAACCTGGGTCCATGGATCTTCTTTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: YSLLLGTCLVCF*GNLGPWIFFDC Trigger: ACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATGTTCCCAGGAGTAAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 90 bp | GTTTTTATATTTTTCTCTTCCAGGTGTTCAGGTACTGGGAAGGCATaGGCAAGCTGTGTGTGGAGGAAGATCAGTAATGGAAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VFIFFSSRCSGTGKA*ASCVWRKISNGSVF Trigger: GAAGACACTTCCATTACTGATCTTCCTCCACACACAGCTTGCCAATGCCTTCCCAGTACCTGAACACCTGGAAGAGAAAAATATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 72 bp | TATGAAGAAGTATGTCTTCCCGTTATAGGAAACAGCTaGATCAATGGCTTGGACACTCCTTGGGAATCCATA | + |
|
Preference number: 6 (lower is better) Translates to: YEEVCLPVIGNS*INGLDTPWESI Trigger: TATGGATTCCCAAGGAGTGTCCAAGCCATTGATGCAGCTGTTTCCTATAACGGGAAGACATACTTCTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CCA 72 bp | ATTCCATTGGGTCCATCAAATGGAGAATTGTCACCATaGTCTCTTGAGACGAAAGCAATGTTGATGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPLGPSNGELSP*SLETKAMLMSA Trigger: AGCAGACATCAACATTGCTTTCGTCTCAAGAGACCATGGTGACAATTCTCCATTTGATGGACCCAATGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 72 bp | CCATCGTGGCATTCCTCGAAGACCGGAATTGATTGCTaGGTAAGTTGTAGAATTTTCGTAGGTAATTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSWHSSKTGIDC*VSCRIFVGNSQ Trigger: CTGAGAATTACCTACGAAAATTCTACAACTTACCAAGCAATCAATTCCGGTCTTCGAGGAATGCCACGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 90 bp | CATGCTTGGTATGCTTTTGGGGTAACCTGGGTCCATGGATCTTCTTaGATTGTCATATCTCCAGCACTGGTTGTTTATGAAGAAGTATGT | + |
|
Preference number: 6 (lower is better) Translates to: HAWYAFGVTWVHGSS*IVISPALVVYEEVC Trigger: ACATACTTCTTCATAAACAACCAGTGCTGGAGATATGACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATACCAAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS TCA 72 bp | AACAGAGATATGAAATTGAGGTCAACTGTTCTCAGCTaGGGATGCCGTCTCCAGAAGTACTTGTCTTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NRDMKLRSTVLS*GCRLQKYLSLK Trigger: CTTTAAAGACAAGTACTTCTGGAGACGGCATCCTCAGCTGAGAACAGTTGACCTCAATTTCATATCTCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS GCA 72 bp | CAACCATCGTGGCATTCCTCGAAGACCGGAATTGATTaGTTGGTAAGTTGTAGAATTTTCGTAGGTAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPSWHSSKTGID*LVSCRIFVGNS Trigger: AGAATTACCTACGAAAATTCTACAACTTACCAAGCAATCAATTCCGGTCTTCGAGGAATGCCACGATGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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| CDS CAA 72 bp | TATGCTTTTGGGGTAACCTGGGTCCATGGATCTTCTTaGATTGTCATATCTCCAGCACTGGTTGTTTATGAA | + |
|
Preference number: 6 (lower is better) Translates to: YAFGVTWVHGSS*IVISPALVVYE Trigger: TTCATAAACAACCAGTGCTGGAGATATGACAATCAAAGAAGATCCATGGACCCAGGTTACCCCAAAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
||
| CDS CAA 90 bp | TCTCTGCAACCATCGTGGCATTCCTCGAAGACCGGAATTGATTGCTaGGTAAGTTGTAGAATTTTCGTAGGTAATTCTCAGCAGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLQPSWHSSKTGIDC*VSCRIFVGNSQQFL Trigger: TAAAAACTGCTGAGAATTACCTACGAAAATTCTACAACTTACCAAGCAATCAATTCCGGTCTTCGAGGAATGCCACGATGGTTGCAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018765.4 |
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