Pregenerated sensors for MMP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018623Ensembl transcript IDs: ENSMUST00000018767.8
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATaGCAGCTGAGGGATGCAATGGAGGACCCAGTGAGTGCAGACCGT | + |
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Preference number: 1 (lower is better) Translates to: QGRGKQVQLRKGVCS*QLRDAMEDPVSADR Trigger: ACGGTCTGCACTCACTGGGTCCTCCATTGCATCCCTCAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| 3UTR GCA 90 bp | GAGATTAGTCAGAATCATTCCGTCAAGATGACCCTCAGAGGGATGTaGAAAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EISQNHSVKMTLRGM*KTHPQHKEEGNRCS Trigger: GCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTTTGCACATCCCTCTGAGGGTCATCTTGACGGAATGATTCTGACTAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| 3UTR CAA 90 bp | CACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTaGTTCATGCCAGCTGAGGGATGCAATGGAGGACCCAGTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HSTRKRETGAAQEGR*FMPAEGCNGGPSEC Trigger: GCACTCACTGGGTCCTCCATTGCATCCCTCAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGCAATGGAGGACCCAGTaGGTGCAGACCGTTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PIHSTRKRETGAAQEGRLQWRTQ*VQTVSV Trigger: CACAGAAACGGTCTGCACTCACTGGGTCCTCCATTG...CAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTATGCCAGCTGAGGGATaGAATGGAGGACCCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KPIHSTRKRETGAAQEGRMPAEG*NGGPSE Trigger: CTCACTGGGTCCTCCATTGCATCCCTCAGCTGGCAT...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGAGCTTCCTGGGACAGTaGCAGGGCCAGGTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLSFLGQ*QGQVAW Trigger: CCAGGCCACCTGGCCCTGCCACTGTCCCAGGAAGCT...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTCAGGGCCAGGTGGCCTaGCAGCAGACACACAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPIHSTRKRETGAAQEGRQGQVA*QQTHKA Trigger: TGCTTTGTGTGTCTGCTGCCAGGCCACCTGGCCCTG...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | ACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTAGTGGCAGGGCCAGGTaGCCTGGCAGCAGACACACA | + |
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Preference number: 4 (lower is better) Translates to: TRKRETGAAQEGRLFMPASGRAR*PGSRHT Trigger: TGTGTGTCTGCTGCCAGGCCACCTGGCCCTGCCACT...AGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGACATCTCCAGCTTCCTaGGACAGTGGCAGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLTSPAS*DSGRAR Trigger: CCTGGCCCTGCCACTGTCCCAGGAAGCTGGAGATGT...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| 3UTR CAA 72 bp | AGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTaGTTCATGCCAGCTGAGGGATGCAATGGAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: RKRETGAAQEGR*FMPAEGCNGGP Trigger: GGGTCCTCCATTGCATCCCTCAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGCTGTTCCCACTGATGTaGGCTCACATCTCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLLFPLM*AHISSF Trigger: GAAGCTGGAGATGTGAGCGCACATCAGTGGGAACAG...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR GCA 90 bp | CAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCCAGGAAGTTCACTCCTaGGTCCTCACCATCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QHKEEGNRCSSGRAFVHAQEVHS*VLTISP Trigger: TGGACTGATGGTGAGGACGCAGGAGTGAACTTCCTG...GGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | ACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTCTCAGACCCAGAGAGTaGCCAAATTCATGGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: THPQHKEEGNRCSSGRAFLRPRE*PNSWVA Trigger: TGCCACCCATGAATTTGGCCACTCTCTGGGTCTGAG...AAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | CAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCGGCCAAATTCATGGGTaGCAGCAAACAGGAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QHKEEGNRCSSGRAFVHAGQIHG*QQTGSS Trigger: TGAACTTCCTGTTTGCTGCCACCCATGAATTTGGCC...GGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGAGAGTTTTCCAGTCATaGGCAGGCCAAAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLRVFQS*AGQRTS Trigger: AGAAGTTCTTTGGCCTGCCCATGACTGGAAAACTCT...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CCA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTGTATTCTGCAACATCTaGCACTCCACACCTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: KPIHSTRKRETGAAQEGRVFCNI*HSTPRF Trigger: AAACCTAGGTGTGGAGTGCCAGATGTTGCAGAATAC...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR TCA 90 bp | ACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTTCTGCATTATTTCCATaGTGTAGGGGGAGAGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: THPQHKEEGNRCSSGRAFSALFP*CRGRVF Trigger: GAAAACTCTCCCCCTACATCATGGAAATAATGCAGA...AAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR TCA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTTCCATATAACTTCTaGATGCCTGCAATGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: KPIHSTRKRETGAAQEGRFPYNF*MPAMSS Trigger: GGACGACATTGCAGGCATTCAGAAGTTATATGGAAA...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR TCA 90 bp | CCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGATACAATTCTGTAGGTaGCAATTCTGGAATGCCATT | + |
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Preference number: 4 (lower is better) Translates to: PIHSTRKRETGAAQEGRLIQFCR*QFWNAI Trigger: AATGGCATTCCAGAATTGTCACCTACAGAATTGTAT...CAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR TCA 90 bp | CAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAAGACTGAAGTCTTCTaGGTAGTCTCTTTGATAGGT | + |
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Preference number: 4 (lower is better) Translates to: QHKEEGNRCSSGRAFVHAKTEVF*VVSLIG Trigger: ACCTATCAAAGAGACTACTCAGAAGACTTCAGTCTT...GGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR GCA 90 bp | ACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTAAGTTCAGTGGGATCTaGATACTCCACATTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TRKRETGAAQEGRLFMPAKFSGI*ILHILR Trigger: TCTCAGAATGTGGAGTATGCAGATCCCACTGAACTT...AGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGTCCATGATCTCTCCTTaGGAAGCCAATTATGATATC | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLSMISP*EANYDI Trigger: GATATCATAATTGGCTTCGCAAGGAGAGATCATGGA...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCAGCTGCATATAACTTCTGAATaGCTGCAATGTCGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QGRGKQVQLRKGVCSCQLHITSE*LQCRPL Trigger: CAAAGGACGACATTGCAGGCATTCAGAAGTTATATG...CAGCTGGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CAA 90 bp | CAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTGTTCATGCCCCCCAACTAACCCTCTaGAAGTTCAGTGGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: QHKEEGNRCSSGRAFVHAPQLTL*KFSGIC Trigger: GCAGATCCCACTGAACTTCAAGAGGGTTAGTTGGGG...GGCATGAACAAACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS GCA 90 bp | GTTCCCTGGCCCATCAAAGGGGAAGCTGTCTCCATGATCTCTCCTTaGGAAGCCAATTATGATATCCGCAGTCCCCCAACTAACCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VPWPIKGEAVSMISP*EANYDIRSPPTNPL Trigger: AAGAGGGTTAGTTGGGGGACTGCGGATATCATAATTGGCTTCGCAAGGAGAGATCATGGAGACAGCTTCCCCTTTGATGGGCCAGGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS GCA 90 bp | AGAGTGGCCAAATTCATGGGTGGCAGCAAACAGGAAGTTCACTCCTaGGTCCTCACCATCAGTCCAGTACTCATCCTTGTCAAAGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: RVAKFMGGSKQEVHS*VLTISPVLILVKVS Trigger: GCTCACTTTGACAAGGATGAGTACTGGACTGATGGTGAGGACGCAGGAGTGAACTTCCTGTTTGCTGCCACCCATGAATTTGGCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CAA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTGCCATTTTGGACTGTTaGGCATTAGTGAGTATTCTG | + |
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Preference number: 5 (lower is better) Translates to: KPIHSTRKRETGAAQEGRAILDC*ALVSIL Trigger: CAGAATACTCACTAATGCCAAACAGTCCAAAATGGC...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS-3UTR CAA 90 bp | AAACCCATCCACAGCACAAGGAAGAGGGAAACAGGTGCAGCTCAGGAAGGGCGTTTCTGGAATGCCATTTaGGACTGTTTGGCATTAGTG | + |
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Preference number: 5 (lower is better) Translates to: KPIHSTRKRETGAAQEGRFWNAI*DCLALV Trigger: CACTAATGCCAAACAGTCCAAAATGGCATTCCAGAA...ACGCCCTTCCTGAGCTGCACCTGTTTCCCTCTTCCTTGTGCTGTGGATGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS TCA 72 bp | GTGTTCCCTGGCCCATCAAAGGGGAAGCTGTCTCCATaGTCTCTCCTTGCGAAGCCAATTATGATATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: VFPGPSKGKLSP*SLLAKPIMISA Trigger: TGCGGATATCATAATTGGCTTCGCAAGGAGAGATCATGGAGACAGCTTCCCCTTTGATGGGCCAGGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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| CDS GCA 72 bp | AAATTCATGGGTGGCAGCAAACAGGAAGTTCACTCCTaGGTCCTCACCATCAGTCCAGTACTCATCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: KFMGGSKQEVHS*VLTISPVLILV Trigger: GACAAGGATGAGTACTGGACTGATGGTGAGGACGCAGGAGTGAACTTCCTGTTTGCTGCCACCCATGAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018767.8 |
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