Pregenerated sensors for MMP27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070323Ensembl transcript IDs: ENSMUST00000120900.8, ENSMUST00000151853.8, ENSMUST00000152878.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGGTCTGGAGTTACAGAGAGCTGTGGACTGCCATGTGGGTACTaGGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTA | + |
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Preference number: 1 (lower is better) Translates to: PGSGVTESCGLPCGY*ESNLGPLKEQPVHL Trigger: TAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTCTCTGTAACTCCAGACCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR TCA 90 bp | AGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTaGGGCAGAGTTCAGGTTAAAAGATTTGTTTTGGTTTATTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SALNHWVISPTLESS*GRVQVKRFVLVYLW Trigger: CCACAAATAAACCAAAACAAATCTTTTAACCTGAACTCTGCCTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CAA 90 bp | AAAGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTaGAGTCTTCCTGAGGCAGAGTTCAGGTTAAAAGATTTGTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KEQPVHLTTGSSLPL*SLPEAEFRLKDLFW Trigger: CCAAAACAAATCTTTTAACCTGAACTCTGCCTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR-3UTR CCA 90 bp | GTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGCTAAAGAATTGGGCTCTGTGGACTGCCATGTaGGTACTGAGAATCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: VTQLIYSRSKNLMLKNWALWTAM*VLRIKP Trigger: AGGTTTGATTCTCAGTACCCACATGGCAGTCCACAG...AGCCCAATTCTTTAGCATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CCA 72 bp | GTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTaGGTCTGGAGTTACAGAGAGCTGTGGACTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: VPSEAREGIRFP*VWSYRELWTAM Trigger: CATGGCAGTCCACAGCTCTCTGTAACTCCAGACCCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CCA 72 bp | TCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGGTCTaGAGTTACAGAGAGCTGTGGACTGCCATGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: SEAREGIRFPWV*SYRELWTAMWV Trigger: TACCCACATGGCAGTCCACAGCTCTCTGTAACTCCAGACCCAGGGAAATCTGATGCCCTCTCTGGCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR TCA 72 bp | GGAGTTACAGAGAGCTGTGGACTGCCATGTGGGTACTaGGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GVTESCGLPCGY*ESNLGPLKEQP Trigger: TGGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTCTCTGTAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR GCA 72 bp | CTTGCATGTATATGTCTATGCACCATGCTTGTGCAGTaGCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: LACICLCTMLVQ*PQRPERASDFP Trigger: AGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTGCATAGACATATACATGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACTCATCTCTCCCACTCTaGAGTCTTCCTGAGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: WVLRIKPGSFERAASALNSSLPL*SLPEAE Trigger: CTCTGCCTCAGGAAGACTCAAGAGTGGGAGAGATGA...GTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR GCA 72 bp | GTTTGCTTGCATGTATATGTCTATGCACCATGCTTGTaGAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATT | + |
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Preference number: 3 (lower is better) Translates to: VCLHVYVYAPCL*SALRGQRGHQI Trigger: AATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTGCATAGACATATACATGCAAGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CCA 72 bp | TGGGTCTGGAGTTACAGAGAGCTGTGGACTGCCATGTaGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: WVWSYRELWTAM*VLRIKPGSFER Trigger: TCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTCTCTGTAACTCCAGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR TCA 72 bp | AACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTaGGGCAGAGTTCAGGTTAAAAGATTTGTTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: NHWVISPTLESS*GRVQVKRFVLV Trigger: AACCAAAACAAATCTTTTAACCTGAACTCTGCCTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCAGAGGACCATCAAAGTaGCGAGGACACCAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: RAASALNHWVISPTLESSRGPSK*RGHQPW Trigger: CCATGGCTGGTGTCCTCGTCACTTTGATGGTCCTCT...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CAA 72 bp | GCCGTTTGCTTGCATGTATATGTCTATGCACCATGCTaGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: AVCLHVYVYAPC*CSALRGQRGHQ Trigger: CTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTGCATAGACATATACATGCAAGCAAACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCTTGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGTATGCCTGGGCCAGTTaGTTGTTCTCCTCATTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HHACAVPSEAREGIRFPWYAWAS*LFSSFL Trigger: CAAAAATGAGGAGAACAACCAACTGGCCCAGGCATA...CCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | CAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGAGGAGAGTAGAACTGGTTaGGATATGCCTGGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QPVHLTTGSSLPLLSLPEESRTG*DMPGPV Trigger: AACTGGCCCAGGCATATCTCAACCAGTTCTACTCTC...CTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCTTGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGCATGGACTCCTGTCCTaGATGCTATCATTATATCTG | + |
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Preference number: 4 (lower is better) Translates to: HHACAVPSEAREGIRFPWHGLLS*MLSLYL Trigger: CAGATATAATGATAGCATTCAGGACAGGAGTCCATG...CCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | CACCATGCTTGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGCCTGTCTGGAGGAAATaGAGCGGAAAGTGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: HHACAVPSEAREGIRFPWPVWRK*SGKCYK Trigger: TTTATAACACTTTCCGCTGCATTTCCTCCAGACAGG...CCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCAATATTGCCCCACATCTaGTACCCCACACCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LWTAMWVLRIKPGSFERAILPHI*YPTPGH Trigger: GTGCCCAGGTGTGGGGTACCAGATGTGGGGCAATAT...TGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | TGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCGTGTGTGGATGGATTTaGGGTAACCGGGCAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: WTAMWVLRIKPGSFERAAVCGWI*GNRARQ Trigger: CTGTCTTGCCCGGTTACCCCAAATCCATCCACACAC...GGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGGTGGTTACCTTAGGTaGACTTCCTTCCCCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPGGYLR*TSFPIL Trigger: AAGGATGGGGAAGGAAGTCCACCTAAGGTAACCACC...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCGATCGCAAGTGTGTCTaGATCCAGTTTTCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RAASALNHWVISPTLESSDRKCV*IQFSSH Trigger: GTGACTGGAAAACTGGATTCAGACACACTTGCGATC...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCACATCAAAAGTCAAGGTaGGGTCACAGGCGTGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LWTAMWVLRIKPGSFERAHQKSR*GHRRGV Trigger: AACCCCACGCCTGTGACCCCACCTTGACTTTTGATG...TGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGTGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGATCATCTTCGTCAAAGTaGGTGTCACCACCTAGACCC | + |
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Preference number: 4 (lower is better) Translates to: ELWTAMWVLRIKPGSFERSSSSK*VSPPRP Trigger: GGGTCTAGGTGGTGACACTCACTTTGACGAAGATGA...TCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTACGGAGGCGAATTCCTaGGAAGCACTTTATTATCCT | + |
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Preference number: 4 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPTEANS*EALYYP Trigger: AGGATAATAAAGTGCTTCCCAGGAATTCGCCTCCGT...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | CACCATGCTTGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGTTGGTTTTGATCACTTaGGTGATATTTTTCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HHACAVPSEAREGIRFPWLVLIT*VIFFAF Trigger: GAAGGCGAAAAATATCACCCAAGTGATCAAAACCAA...CCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTATGATCACAGACGGCTaGATCAATTTTCTTCACACG | + |
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Preference number: 4 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPMITDG*INFLHT Trigger: CGTGTGAAGAAAATTGATGCAGCCGTCTGTGATCAT...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGTGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGATTTGTCCTTCCTGTCTaGAGGAAATGCAGCGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ELWTAMWVLRIKPGSFERFVLPV*RKCSGK Trigger: CTTTCCGCTGCATTTCCTCCAGACAGGAAGGACAAA...TCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | TGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACTGGTTGAGATATGCCTaGGCCAGTTGGTTGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: WVLRIKPGSFERAASALNWLRYA*ASWLFS Trigger: GGAGAACAACCAACTGGCCCAGGCATATCTCAACCA...GTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTCTTTATTATCCTCTGTaGGAATCCTCTGTCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPLYYPL*ESSVHC Trigger: GCAATGGACAGAGGATTCCCACAGAGGATAATAAAG...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| 3UTR CAA 72 bp | CCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTaGAGTCTTCCTGAGGCAGAGTTCAGGTTAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PVHLTTGSSLPL*SLPEAEFRLKD Trigger: ATCTTTTAACCTGAACTCTGCCTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | CAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGAGTGTCAATCCGAAAAATaGCTGCATTTCCCGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QPVHLTTGSSLPLLSLPECQSEK*LHFPKF Trigger: AAACTTCGGGAAATGCAGGCATTTTTCGGATTGACA...CTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | TGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGCAGCCTTTCTTCACACGTCTTaGAAATCCGAGTGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: WTAMWVLRIKPGSFERAAFLHTS*KSECVD Trigger: ATCCACACACTCGGATTTCCAAGACGTGTGAAGAAA...GGCTGCTCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | AACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCTTCCTTCCCCATCCTTaGCTATCCATGTTTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: NLGPLKEQPVHLTTGSSLFLPHP*LSMFHL Trigger: AAGATGAAACATGGATAGCCAAGGATGGGGAAGGAA...GAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTTGCTTTGGACAAAATaGCTCCCTTCTATTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RAASALNHWVISPTLESSLLWTK*LPSISR Trigger: TCTTGAAATAGAAGGGAGTCATTTTGTCCAAAGCAA...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | AACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCTGCTATCATTATATCTaGAACCCCCTTGGATATCCT | + |
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Preference number: 4 (lower is better) Translates to: NLGPLKEQPVHLTTGSSLCYHYI*NPLGYP Trigger: AGGATATCCAAGGGGGTTGCAGATATAATGATAGCA...GAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CCA 90 bp | CTCCCACTCTTGAGTCTTCCTGAGGCAGAGTTCAGGTTAAAAGATTTGTTTTGGATCAGCTGGCAGAGATaGCCAGAAGGAATCAATAAA | + |
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Preference number: 4 (lower is better) Translates to: LPLLSLPEAEFRLKDLFWISWQR*PEGINK Trigger: TTTATTGATTCCTTCTGGCCATCTCTGCCAGCTGAT...CCAAAACAAATCTTTTAACCTGAACTCTGCCTCAGGAAGACTCAAGAGTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | GTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGCTAAAGAATTGGGCTTCTGTCCATTGCTTGTaGCATCTCATCATACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTQLIYSRSKNLMLKNWASVHCL*HLIIPP Trigger: TGGAGGTATGATGAGATGGCACAAGCAATGGACAGA...AGCCCAATTCTTTAGCATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR TCA 90 bp | GTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGCTAAAGAATTGGGCTACTTGTAGAGCTTTCTaGATAGCCTCATCCACATCA | + |
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Preference number: 4 (lower is better) Translates to: VTQLIYSRSKNLMLKNWATCRAF*IASSTS Trigger: TGATGTGGATGAGGCTATTCAGAAAGCTCTACAAGT...AGCCCAATTCTTTAGCATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | TTTAACTGGTTATTGGTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGGAACTGGTTGAGATATaGCTGGGCCAGTTGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FNWLLVTQLIYSRSKNLMELVEI*LGQLVV Trigger: AACAACCAACTGGCCCAGGCATATCTCAACCAGTTC...CATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAACCAATAACCAGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR GCA 90 bp | GTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGCTAAAGAATTGGGCTATGTCATATTCAAATTaGCTCGACCCATGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VTQLIYSRSKNLMLKNWAMSYSN*LDPWKK Trigger: TTTCTTCCATGGGTCGAGGCAATTTGAATATGACAT...AGCCCAATTCTTTAGCATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS TCA 90 bp | GACTCCCAGAGGACCATCAAAGTGACGAGGACACCAGCCATGGACTaGAAGACAGTTGATGGGGAGATAGGTCAGCTCCCTGTGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: DSQRTIKVTRTPAMD*KTVDGEIGQLPVIL Trigger: GAGGATCACAGGGAGCTGACCTATCTCCCCATCAACTGTCTTTCAGTCCATGGCTGGTGTCCTCGTCACTTTGATGGTCCTCTGGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
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| CDS-3UTR CAA 90 bp | CACCATGCTTGTGCAGTGCCCTCAGAGGCCAGAGAGGGCATCAGATTTCCCTGGTTGTTCTCCTCATTTTaGTCCTTCCTGTCTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: HHACAVPSEAREGIRFPWLFSSF*SFLSGG Trigger: TCCTCCAGACAGGAAGGACAAAAATGAGGAGAACAA...CCAGGGAAATCTGATGCCCTCTCTGGCCTCTGAGGGCACTGCACAAGCATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS-3UTR CAA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGCCTGGGCCAGTTGGTaGTTCTCCTCATTTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPAWASW*FSSFLS Trigger: GGACAAAAATGAGGAGAACAACCAACTGGCCCAGGC...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
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| CDS TCA 90 bp | AACCCTTCCCCATCCTTGGCTATCCATGTTTCATCTTCGTCAAAGTaGGTGTCACCACCTAGACCCAGACCAGGAGGAAAGGCATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NPSPSLAIHVSSSSK*VSPPRPRPGGKAWP Trigger: TGGCCATGCCTTTCCTCCTGGTCTGGGTCTAGGTGGTGACACTCACTTTGACGAAGATGAAACATGGATAGCCAAGGATGGGGAAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 |
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| CDS TCA 90 bp | GACCATCAAAGTGACGAGGACACCAGCCATGGACTGAAAGACAGTTaGTGGGGAGATAGGTCAGCTCCCTGTGATCCTCGAAGAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: DHQSDEDTSHGLKDS*WGDRSAPCDPRRSH Trigger: GTGACTTCTTCGAGGATCACAGGGAGCTGACCTATCTCCCCATCAACTGTCTTTCAGTCCATGGCTGGTGTCCTCGTCACTTTGATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
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| CDS TCA 90 bp | CTTCCTTCCCCATCCTTGGCTATCCATGTTTCATCTTCGTCAAAGTaGGTGTCACCACCTAGACCCAGACCAGGAGGAAAGGCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPSLAIHVSSSSK*VSPPRPRPGGKAWP Trigger: TGGCCATGCCTTTCCTCCTGGTCTGGGTCTAGGTGGTGACACTCACTTTGACGAAGATGAAACATGGATAGCCAAGGATGGGGAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | GAGCTGTGGACTGCCATGTGGGTACTGAGAATCAAACCTGGGTCCTTTGAAAGAGAGTGTGTAGCCATATaGCCCCACATCTGGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELWTAMWVLRIKPGSFERECVAI*PHIWYP Trigger: GGGGTACCAGATGTGGGGCAATATGGCTACACACTC...TCTTTCAAAGGACCCAGGTTTGATTCTCAGTACCCACATGGCAGTCCACAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS CCA 90 bp | GGCGTGGGGTTCAGAATTTCCACTTGGCTTGGTGGTTACCTTAGGTaGACTTCCTTCCCCATCCTTGGCTATCCATGTTTCATCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVGFRISTWLGGYLR*TSFPILGYPCFIFV Trigger: GACGAAGATGAAACATGGATAGCCAAGGATGGGGAAGGAAGTCCACCTAAGGTAACCACCAAGCCAAGTGGAAATTCTGAACCCCACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | AACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCGCTTTCATAGGCAGCTaGAAGATCAGCTGGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLGPLKEQPVHLTTGSSLAFIGS*KISWQR Trigger: TCTCTGCCAGCTGATCTTCAAGCTGCCTATGAAAGC...GAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCGGAATCCTCTGTCCATaGCTTGTGCCATCTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAASALNHWVISPTLESSGILCP*LVPSHH Trigger: ATGATGAGATGGCACAAGCAATGGACAGAGGATTCC...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGAGGAATCCATTATGTaGGAAGACAGCATCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: EQPVHLTTGSSLPLLSLPEESIM*EDSIHT Trigger: CGTGTGGATGCTGTCTTCCAACATAATGGATTCCTC...AGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCTGAGCTTCCTTCCCCATCCTaGGCTATCCATGTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QPVHLTTGSSLPLLSLPELPSPS*AIHVSS Trigger: AGATGAAACATGGATAGCCAAGGATGGGGAAGGAAG...CTCAGGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS GCA 90 bp | AGGACACCAGCCATGGACTCCTGTCCTGAATGCTATCATTATATCTaGAACCCCCTTGGATATCCTGGTAAACGTCAGTGGAGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTPAMDSCPECYHYI*NPLGYPGKRQWSDL Trigger: AAGGTCACTCCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGTCCATGGCTGGTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000152878.3 |
||
| CDS CCA 90 bp | GGCGTGGGGTTCAGAATTTCCACTTGGCTTGGTGGTTACCTTAGGTaGACTTCCATAGATGGACTGGATCCCATCAATATCATCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVGFRISTWLGGYLR*TSIDGLDPINIILR Trigger: TCTCAGGATGATATTGATGGGATCCAGTCCATCTATGGAAGTCCACCTAAGGTAACCACCAAGCCAAGTGGAAATTCTGAACCCCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 |
||
| CDS-3UTR CAA 90 bp | AACCTGGGTCCTTTGAAAGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCACAGGAACCAAGAATaGGTTTTGATCACTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLGPLKEQPVHLTTGSSLHRNQE*VLITWV Trigger: CACCCAAGTGATCAAAACCAATTCTTGGTTCCTGTG...GAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCTTTCAAAGGACCCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS GCA 90 bp | TCCTGGGAAGCACTTTATTATCCTCTGTGGGAATCCTCTGTCCATTaGTTGTGCCATCTCATCATACCTCCAGCACCAGATGCCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SWEALYYPLWESSVH*LCHLIIPPAPDANK Trigger: TTTGTTGGCATCTGGTGCTGGAGGTATGATGAGATGGCACAAGCAATGGACAGAGGATTCCCACAGAGGATAATAAAGTGCTTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 90 bp | CTCACTGCAAGCCTTACCTCCTGTCCTGAATGCTATCATTATATCTaGAACCCCCTTGGATATCCTGGTAAACGTCAGTGGAGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTASLTSCPECYHYI*NPLGYPGKRQWSDL Trigger: AAGGTCACTCCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGGTAAGGCTTGCAGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
||
| CDS CCA 90 bp | TGTATCATGATCACAGACGGCTGCATCAATTTTCTTCACACGTCTTaGAAATCCGAGTGTGTGGATGGATTTGGGGTAACCGGGCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIMITDGCINFLHTS*KSECVDGFGVTGQD Trigger: GTCTTGCCCGGTTACCCCAAATCCATCCACACACTCGGATTTCCAAGACGTGTGAAGAAAATTGATGCAGCCGTCTGTGATCATGATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCCCTTTGACACTGACATaGAATGATGCGTTTAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAASALNHWVISPTLESSPLTLT*NDAFNG Trigger: ACCATTAAACGCATCATTCAATGTCAGTGTCAAAGG...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCAAAAGAAGGTTTTTCTaGTATCATGATCACAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: RAASALNHWVISPTLESSKRRFF*YHDHRR Trigger: CCGTCTGTGATCATGATACAAGAAAAACCTTCTTTT...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCCAGTGCACTTAACCACTGGGTCATCTCTCCCACTCTTGAGTCTTCCATTGGTTTTGATCACTaGGGTGATATTTTTCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAASALNHWVISPTLESSIGFDH*GDIFRL Trigger: AAGGCGAAAAATATCACCCAAGTGATCAAAACCAAT...GGAAGACTCAAGAGTGGGAGAGATGACCCAGTGGTTAAGTGCACTGGCTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS GCA 90 bp | AAAATGACTCCCTTCTATTTCAAGAGAGTAGAACTGGTTGAGATATaGCTGGGCCAGTTGGTTGTTCTCCTCATTTTTGTCCTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KMTPFYFKRVELVEI*LGQLVVLLIFVLPV Trigger: GACAGGAAGGACAAAAATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTTGAAATAGAAGGGAGTCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS TCA 90 bp | TTTGGACAAAATGACTCCCTTCTATTTCAAGAGAGTAGAACTGGTTaGGATATGCCTGGGCCAGTTGGTTGTTCTCCTCATTTTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGQNDSLLFQESRTG*DMPGPVGCSPHFCP Trigger: AGGACAAAAATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTTGAAATAGAAGGGAGTCATTTTGTCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 90 bp | ATGCCTGCATTTCCCGAAGTTTTCCATCAAAGAGACTCCTGTTCTTaGTTTGGACAAAATGACTCCCTTCTATTTCAAGAGAGTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: MPAFPEVFHQRDSCS*FGQNDSLLFQESRT Trigger: AGTTCTACTCTCTTGAAATAGAAGGGAGTCATTTTGTCCAAAGCAAGAACAGGAGTCTCTTTGATGGAAAACTTCGGGAAATGCAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGGTTATTGGTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGGTCAGTGGAGTGACCTaGCTCCAAACTTGTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNWLLVTQLIYSRSKNLMVSGVT*LQTCRA Trigger: AGCTCTACAAGTTTGGAGCAAGGTCACTCCACTGAC...CATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAACCAATAACCAGTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | GTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGCTAAAGAATTGGGCTTTTTCTTCACACGTCTaGGAAATCCGAGTGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTQLIYSRSKNLMLKNWAFSSHV*EIRVCG Trigger: TCCACACACTCGGATTTCCAAGACGTGTGAAGAAAA...AGCCCAATTCTTTAGCATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGGTTATTGGTTACCCAGCTGATATATAGTAGGAGTAAGAACTTGATGATATCTGCAACCCCCTaGGATATCCTGGTAAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNWLLVTQLIYSRSKNLMISATP*DILVNV Trigger: GACGTTTACCAGGATATCCAAGGGGGTTGCAGATAT...CATCAAGTTCTTACTCCTACTATATATCAGCTGGGTAACCAATAACCAGTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS CCA 72 bp | CCACCCAGGGAGTGTGTAGCCATATTGCCCCACATCTaGTACCCCACACCTGGGCACTTTCATGATCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPRECVAILPHI*YPTPGHFHDRK Trigger: CTTGCGATCATGAAAGTGCCCAGGTGTGGGGTACCAGATGTGGGGCAATATGGCTACACACTCCCTGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS TCA 72 bp | AGTGACGAGGACACCAGCCATGGACTGAAAGACAGTTaGTGGGGAGATAGGTCAGCTCCCTGTGATCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SDEDTSHGLKDS*WGDRSAPCDPR Trigger: TCGAGGATCACAGGGAGCTGACCTATCTCCCCATCAACTGTCTTTCAGTCCATGGCTGGTGTCCTCGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
||
| CDS TCA 72 bp | AGGACCATCAAAGTGACGAGGACACCAGCCATGGACTaGAAGACAGTTGATGGGGAGATAGGTCAGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RTIKVTRTPAMD*KTVDGEIGQLP Trigger: AGGGAGCTGACCTATCTCCCCATCAACTGTCTTTCAGTCCATGGCTGGTGTCCTCGTCACTTTGATGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
||
| CDS TCA 72 bp | CCATCCTTGGCTATCCATGTTTCATCTTCGTCAAAGTaGGTGTCACCACCTAGACCCAGACCAGGAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLAIHVSSSSK*VSPPRPRPGGK Trigger: CTTTCCTCCTGGTCTGGGTCTAGGTGGTGACACTCACTTTGACGAAGATGAAACATGGATAGCCAAGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CAA 72 bp | CCTCGACCCATGGAAGAAATAGAGGAATCCATTATGTaGGAAGACAGCATCCACACGGAGGCGAATTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPMEEIEESIM*EDSIHTEANSW Trigger: CCAGGAATTCGCCTCCGTGTGGATGCTGTCTTCCAACATAATGGATTCCTCTATTTCTTCCATGGGTCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS TCA 72 bp | CAAAGTGACGAGGACACCAGCCATGGACTCCTGTCCTaGATGCTATCATTATATCTGCAACCCCCTTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: QSDEDTSHGLLS*MLSLYLQPPWI Trigger: TATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGTCCATGGCTGGTGTCCTCGTCACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | GCCATGGACTCCTGTCCTGAATGCTATCATTATATCTaGAACCCCCTTGGATATCCTGGTAAACGTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AMDSCPECYHYI*NPLGYPGKRQW Trigger: CCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGTCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | TATTATCCTCTGTGGGAATCCTCTGTCCATTGCTTGTaGCATCTCATCATACCTCCAGCACCAGATGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: YYPLWESSVHCL*HLIIPPAPDAN Trigger: GTTGGCATCTGGTGCTGGAGGTATGATGAGATGGCACAAGCAATGGACAGAGGATTCCCACAGAGGATAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CCA 72 bp | TTTTCTTCACACGTCTTGGAAATCCGAGTGTGTGGATaGATTTGGGGTAACCGGGCAAGACAGAATATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSHVLEIRVCG*IWGNRARQNIP Trigger: GGGGATATTCTGTCTTGCCCGGTTACCCCAAATCCATCCACACACTCGGATTTCCAAGACGTGTGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CCA 72 bp | ATGTTGGAAGACAGCATCCACACGGAGGCGAATTCCTaGGAAGCACTTTATTATCCTCTGTGGGAATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLEDSIHTEANS*EALYYPLWESS Trigger: AGAGGATTCCCACAGAGGATAATAAAGTGCTTCCCAGGAATTCGCCTCCGTGTGGATGCTGTCTTCCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CAA 90 bp | CCATGGACTCCTGTCCTGAATGCTATCATTATATCTGCAACCCCCTaGGATATCCTGGTAAACGTCAGTGGAGTGACCTTGCTCCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PWTPVLNAIIISATP*DILVNVSGVTLLQT Trigger: AGTTTGGAGCAAGGTCACTCCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGTCCATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000152878.3 |
||
| CDS CAA 90 bp | GCCTTACCTCCTGTCCTGAATGCTATCATTATATCTGCAACCCCCTaGGATATCCTGGTAAACGTCAGTGGAGTGACCTTGCTCCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: ALPPVLNAIIISATP*DILVNVSGVTLLQT Trigger: AGTTTGGAGCAAGGTCACTCCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGGTAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
||
| CDS TCA 72 bp | CCCACACCTGGGCACTTTCATGATCGCAAGTGTGTCTaGATCCAGTTTTCCAGTCACTGTCAATCCGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PTPGHFHDRKCV*IQFSSHCQSEK Trigger: TTTTTCGGATTGACAGTGACTGGAAAACTGGATTCAGACACACTTGCGATCATGAAAGTGCCCAGGTGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | GCACTTTATTATCCTCTGTGGGAATCCTCTGTCCATTaGTTGTGCCATCTCATCATACCTCCAGCACCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALYYPLWESSVH*LCHLIIPPAPD Trigger: ATCTGGTGCTGGAGGTATGATGAGATGGCACAAGCAATGGACAGAGGATTCCCACAGAGGATAATAAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | AGCCTTACCTCCTGTCCTGAATGCTATCATTATATCTaGAACCCCCTTGGATATCCTGGTAAACGTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLTSCPECYHYI*NPLGYPGKRQW Trigger: CCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGGAGGTAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151853.8 |
||
| CDS CCA 72 bp | TTCAGAATTTCCACTTGGCTTGGTGGTTACCTTAGGTaGACTTCCTTCCCCATCCTTGGCTATCCATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRISTWLGGYLR*TSFPILGYPCF Trigger: GAAACATGGATAGCCAAGGATGGGGAAGGAAGTCCACCTAAGGTAACCACCAAGCCAAGTGGAAATTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152878.3 |
||
| CDS CAA 72 bp | AAGAGAGTAGAACTGGTTGAGATATGCCTGGGCCAGTaGGTTGTTCTCCTCATTTTTGTCCTTCCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KRVELVEICLGQ*VVLLIFVLPVW Trigger: CCAGACAGGAAGGACAAAAATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CAA 72 bp | CCTGTCCTGAATGCTATCATTATATCTGCAACCCCCTaGGATATCCTGGTAAACGTCAGTGGAGTGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PVLNAIIISATP*DILVNVSGVTL Trigger: CAAGGTCACTCCACTGACGTTTACCAGGATATCCAAGGGGGTTGCAGATATAATGATAGCATTCAGGACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CAA 90 bp | TTCTATTTCAAGAGAGTAGAACTGGTTGAGATATGCCTGGGCCAGTaGGTTGTTCTCCTCATTTTTGTCCTTCCTGTCTGGAGGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: FYFKRVELVEICLGQ*VVLLIFVLPVWRKC Trigger: GCATTTCCTCCAGACAGGAAGGACAAAAATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTTGAAATAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS TCA 72 bp | AATGACTCCCTTCTATTTCAAGAGAGTAGAACTGGTTaGGATATGCCTGGGCCAGTTGGTTGTTCTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: NDSLLFQESRTG*DMPGPVGCSPH Trigger: ATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTTGAAATAGAAGGGAGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | CCCTTCTATTTCAAGAGAGTAGAACTGGTTGAGATATaGCTGGGCCAGTTGGTTGTTCTCCTCATTTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PFYFKRVELVEI*LGQLVVLLIFV Trigger: GACAAAAATGAGGAGAACAACCAACTGGCCCAGGCATATCTCAACCAGTTCTACTCTCTTGAAATAGAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS CCA 72 bp | TTCAGAATTTCCACTTGGCTTGGTGGTTACCTTAGGTaGACTTCCATAGATGGACTGGATCCCATCAATATC | + |
|
Preference number: 6 (lower is better) Translates to: FRISTWLGGYLR*TSIDGLDPINI Trigger: GATATTGATGGGATCCAGTCCATCTATGGAAGTCCACCTAAGGTAACCACCAAGCCAAGTGGAAATTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 |
||
| CDS CAA 90 bp | CTGCATTTCCCGAAGTTTTCCATCAAAGAGACTCCTGTTCTTGCTTaGGACAAAATGACTCCCTTCTATTTCAAGAGAGTAGAACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LHFPKFSIKETPVLA*DKMTPFYFKRVELV Trigger: AACCAGTTCTACTCTCTTGAAATAGAAGGGAGTCATTTTGTCCAAAGCAAGAACAGGAGTCTCTTTGATGGAAAACTTCGGGAAATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
||
| CDS GCA 72 bp | GTTCTCCTCATTTTTGTCCTTCCTGTCTGGAGGAAATaGAGCGGAAAGTGTTATAAAATTAACCATCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: VLLIFVLPVWRK*SGKCYKINHQR Trigger: TCTCTGATGGTTAATTTTATAACACTTTCCGCTGCATTTCCTCCAGACAGGAAGGACAAAAATGAGGAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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| CDS GCA 72 bp | TTTCCCGAAGTTTTCCATCAAAGAGACTCCTGTTCTTaGTTTGGACAAAATGACTCCCTTCTATTTCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FPEVFHQRDSCS*FGQNDSLLFQE Trigger: CTCTTGAAATAGAAGGGAGTCATTTTGTCCAAAGCAAGAACAGGAGTCTCTTTGATGGAAAACTTCGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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| CDS CAA 72 bp | TTGGGTGATATTTTTCGCCTTCATGTCATATTCAAATaGCCTCGACCCATGGAAGAAATAGAGGAATCCATT | + |
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Preference number: 6 (lower is better) Translates to: LGDIFRLHVIFK*PRPMEEIEESI Trigger: AATGGATTCCTCTATTTCTTCCATGGGTCGAGGCAATTTGAATATGACATGAAGGCGAAAAATATCACCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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| CDS CAA 90 bp | TTTGATCACTTGGGTGATATTTTTCGCCTTCATGTCATATTCAAATaGCCTCGACCCATGGAAGAAATAGAGGAATCCATTATGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FDHLGDIFRLHVIFK*PRPMEEIEESIMLE Trigger: TTCCAACATAATGGATTCCTCTATTTCTTCCATGGGTCGAGGCAATTTGAATATGACATGAAGGCGAAAAATATCACCCAAGTGATCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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| CDS CCA 72 bp | TCGTTACACAGGAACCAAGAATTGGTTTTGATCACTTaGGTGATATTTTTCGCCTTCATGTCATATTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SLHRNQELVLIT*VIFFAFMSYSN Trigger: ATTTGAATATGACATGAAGGCGAAAAATATCACCCAAGTGATCAAAACCAATTCTTGGTTCCTGTGTAACGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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| CDS CAA 72 bp | TGTAATATCACTGTGCCAATTGAATTTGCTTTTCCTTaGACACTGACATTGAATGATGCGTTTAATGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: CNITVPIEFAFP*TLTLNDAFNGS Trigger: CGAACCATTAAACGCATCATTCAATGTCAGTGTCAAAGGAAAAGCAAATTCAATTGGCACAGTGATATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000120900.8 ENSMUST00000151853.8 ENSMUST00000152878.3 |
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