Pregenerated sensors for MMP24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027612Ensembl transcript IDs: ENSMUST00000029141.6
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCCAGGACAGAAGGCTGGCAGCTGGGTGCCAGCTACCCAACCTaGGGCATAGCCACCATCACTCCCTGCCCCGCACTCAGCCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: LPRTEGWQLGASYPT*GIATITPCPALSLD Trigger: GTCTAGGCTGAGTGCGGGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGCCAGCCTTCTGTCCTGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR GCA 90 bp | GGCATAGCCACCATCACTCCCTGCCCCGCACTCAGCCTAGACCAGTaGACCCACCACTTCAGCTACACACGAACCTGGCCTAGGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GIATITPCPALSLDQ*THHFSYTRTWPRAL Trigger: CAGGGCCCTAGGCCAGGTTCGTGTGTAGCTGAAGTGGTGGGTGCACTGGTCTAGGCTGAGTGCGGGGCAGGGAGTGATGGTGGCTATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR GCA 90 bp | TTGAGTAGAGAGAGGTCTGCCCAGGACAGAAGGCTGGCAGCTGGGTaGCAGCTACCCAACCTGGGGCATAGCCACCATCACTCCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: LSRERSAQDRRLAAG*QLPNLGHSHHHSLP Trigger: GGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGCCAGCCTTCTGTCCTGGGCAGACCTCTCTCTACTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR GCA 90 bp | GGCTGCCTGCCTCCATCCCCTGCTCTTTCGCAACTGGCCTTGGAATaGCAGGAGCCAACAGGGAGCCTGCGGGGCCTAGAGCTTTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GCLPPSPALSQLALE*QEPTGSLRGLELSR Trigger: TCTTGAAAGCTCTAGGCCCCGCAGGCTCCCTGTTGGCTCCTGGCATTCCAAGGCCAGTTGCGAAAGAGCAGGGGATGGAGGCAGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CCA 90 bp | GGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTaGAAGGGCCCACTGATGGGGACACAAGACCCAGCCAGGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: GGPEERTRRDSFLGP*KGPLMGTQDPARAT Trigger: GGTGGCCCTGGCTGGGTCTTGTGTCCCCATCAGTGGGCCCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR TCA 90 bp | AGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGGCCCACTaGTGGGGACACAAGACCCAGCCAGGGCCACCTGGATGGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: RGLEETVFSDPGRAH*WGHKTQPGPPGWQG Trigger: CCCCTGCCATCCAGGTGGCCCTGGCTGGGTCTTGTGTCCCCATCAGTGGGCCCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR TCA 90 bp | CAGATGACCGCAGGCAGAAGAATCCAAGATTGGAAGCCTCTAGGCTaGGCCCTCTCTGGGCCCGGCCCTGTGTCCCTCACATCTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: QMTAGRRIQDWKPLG*ALSGPGPVSLTSAA Trigger: GGCTGCAGATGTGAGGGACACAGGGCCGGGCCCAGAGAGGGCTCAGCCTAGAGGCTTCCAATCTTGGATTCTTCTGCCTGCGGTCATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR TCA 90 bp | GCAGGCTCAGAGGTCAGAGTTGGTATCTGTGACCCACTAGCACCCTaGTGGCCGCCTCATACCACCGTTGGGTTTGGCAGAGAGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: AGSEVRVGICDPLAP*WPPHTTVGFGREPV Trigger: CACTGGCTCTCTGCCAAACCCAACGGTGGTATGAGGCGGCCATCAGGGTGCTAGTGGGTCACAGATACCAACTCTGACCTCTGAGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CCA 90 bp | AGAGGAGACCTGGCGGGTGGAACAGGTTTCCTGAGGAATCCTCTATaGGCTAGCAGGGGAAACCCAGGCTTTTGCCCACTCTGTTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: RGDLAGGTGFLRNPL*ASRGNPGFCPLCWH Trigger: ATGCCAACAGAGTGGGCAAAAGCCTGGGTTTCCCCTGCTAGCCCATAGAGGATTCCTCAGGAAACCTGTTCCACCCGCCAGGTCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR GCA 90 bp | GAGATTTTACTCAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTaGTACAGGGCGAGAGACCACAGGGCAGGGGCAAAGCCCATGCAG | + |
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Preference number: 1 (lower is better) Translates to: EILLNNSQGIKSLCL*YRARDHRAGAKPMQ Trigger: CTGCATGGGCTTTGCCCCTGCCCTGTGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTGAGTAAAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR GCA 90 bp | GGTCAAGATAGGAGCACAAACACCGACTCCAGGCTGGAGCTGAGTTaGCTCAGGGTCACTGGGGATGTAGATGGAGAACTTAAAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GQDRSTNTDSRLELS*LRVTGDVDGELKRL Trigger: CAGCCTTTTAAGTTCTCCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTGCTCCTATCTTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR TCA 90 bp | GTGACAGGACATTTAAATATTCACGACATGACAGCTGGGTCCTTGTaGGATCCAGCTGGGCCACAGCCTTGCCTGCAGCATGTGACCCTA | + |
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Preference number: 1 (lower is better) Translates to: VTGHLNIHDMTAGSL*DPAGPQPCLQHVTL Trigger: TAGGGTCACATGCTGCAGGCAAGGCTGTGGCCCAGCTGGATCTCACAAGGACCCAGCTGTCATGTCGTGAATATTTAAATGTCCTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CCA 90 bp | GGGAGCCTGCCCTTGGCCAAAATGAGCAAGAACACAATGGTGAGATaGGACACAGTGGACCCACATAGGTGCTTCTGGGACAAGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: GSLPLAKMSKNTMVR*DTVDPHRCFWDKRF Trigger: AAATCTCTTGTCCCAGAAGCACCTATGTGGGTCCACTGTGTCCCATCTCACCATTGTGTTCTTGCTCATTTTGGCCAAGGGCAGGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CCA 90 bp | AACACAATGGTGAGATGGGACACAGTGGACCCACATAGGTGCTTCTaGGACAAGAGATTTTACTCAACAACTCCCAGGGCATCAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: NTMVRWDTVDPHRCF*DKRFYSTTPRASRV Trigger: GACTCTTGATGCCCTGGGAGTTGTTGAGTAAAATCTCTTGTCCCAGAAGCACCTATGTGGGTCCACTGTGTCCCATCTCACCATTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CAA 90 bp | AGCCTGGGCTGCCTGCCTCCATCCCCTGCTCTTTCGCAACTGGCCTaGGAATGCCAGGAGCCAACAGGGAGCCTGCGGGGCCTAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SLGCLPPSPALSQLA*ECQEPTGSLRGLEL Trigger: AAGCTCTAGGCCCCGCAGGCTCCCTGTTGGCTCCTGGCATTCCAAGGCCAGTTGCGAAAGAGCAGGGGATGGAGGCAGGCAGCCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGCTTGCCTCAGAGGGCTaGGTCCCAGCCAGGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSALPVVRPSPQATEDRLLASEG*VPARTG Trigger: TCCAGTCCTGGCTGGGACCCAGCCCTCTGAGGCAAG...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CAA 90 bp | CTCCTGGCACCATCCTTGCCTCCTGACAGGGCCTGGCCTATTCCCTaGAGTAGAGAGAGGTCTGCCCAGGACAGAAGGCTGGCAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLAPSLPPDRAWPIP*SRERSAQDRRLAAG Trigger: CCCAGCTGCCAGCCTTCTGTCCTGGGCAGACCTCTCTCTACTCAAGGGAATAGGCCAGGCCCTGTCAGGAGGCAAGGATGGTGCCAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGGCTGGCAGCTGGGTaGCAGCTACCCAACCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCRLAAG*QLPNLG Trigger: CCCCAGGTTGGGTAGCTGGCACCCAGCTGCCAGCCT...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCTCCTGGCACCATCCTTaGCTCCTGACAGGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGSRILSALPVVRPSPQASWHHP*LLTGPG Trigger: GCCAGGCCCTGTCAGGAGGCAAGGATGGTGCCAGGA...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGGAGGAAGGGCCTGGCTaGCCAGACCGGGTAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: HRLQAGAELPQGHWGCRWEEGPG*PDRVDR Trigger: TCTGTCTACCCGGTCTGGCCAGCCAGGCCCTTCCTC...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACCCCTGCTGGCCCCAGTaGGCAGTGGCTAGAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNPCWPQ*AVARAA Trigger: GGCAGCTCTAGCCACTGCCCACTGGGGCCAGCAGGG...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGAGAGGGGACTGGGATTaGTGGCATCTTGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSALPVVRPSPQATEDRLRGDWD*WHLGVG Trigger: CCCCACCCCAAGATGCCACCAATCCCAGTCCCCTCT...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACCATCCTTGCCTCCTaGCAGGGCCTGGCCTATTCC | + |
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Preference number: 2 (lower is better) Translates to: GGSRILSALPVVRPSPQATILAS*QGLAYS Trigger: GGAATAGGCCAGGCCCTGTCAGGAGGCAAGGATGGT...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGCTACACACGAACCTaGCCTAGGGCCCTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCSYTRT*PRALLA Trigger: GGCCAGCAGGGCCCTAGGCCAGGTTCGTGTGTAGCT...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CAA 90 bp | CAAACTTGCATCCGCCCCCAGAACCAGGGTCAGCTCCTGCAGCTGTaGAGCCTCCTGAACAGGATGCCCGCTAGTATCAGGATGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: QTCIRPQNQGQLLQL*SLLNRMPASIRMPE Trigger: CTCGGGCATCCTGATACTAGCGGGCATCCTGTTCAGGAGGCTCAACAGCTGCAGGAGCTGACCCTGGTTCTGGGGGCGGATGCAAGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR TCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTCACCACAGGATGCAATaGCCTCAGGGGCACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCHHRMQ*PQGHLL Trigger: CAGGAGGTGCCCCTGAGGTCATTGCATCCTGTGGTG...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGGCAGACACCACAGGATaGAATGACCTCAGGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: HRLQAGAELPQGHWGCRWADTTG*NDLRGT Trigger: GGTGCCCCTGAGGTCATTGCATCCTGTGGTGTCTGC...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGCTTGTGAGATCCAGCTaGGCCACAGCCTTGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: HRLQAGAELPQGHWGCRWLVRSS*ATALPA Trigger: TGCAGGCAAGGCTGTGGCCCAGCTGGATCTCACAAG...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR CAA 90 bp | TGGGCTGATGGACAAACAGATGACCGCAGGCAGAAGAATCCAAGATaGGAAGCCTCTAGGCTGAGCCCTCTCTGGGCCCGGCCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: WADGQTDDRRQKNPR*EASRLSPLWARPCV Trigger: GACACAGGGCCGGGCCCAGAGAGGGCTCAGCCTAGAGGCTTCCAATCTTGGATTCTTCTGCCTGCGGTCATCTGTTTGTCCATCAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGATCTTGGGGTGGGGGTaGGAGCTAGTGCTGGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: REAQRRGLEETVFSDPGRILGWG*ELVLAC Trigger: GCAAGCCAGCACTAGCTCTCACCCCCACCCCAAGAT...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACACAGCTGGGTCCTTGTaGGATCCAGCTGGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNTAGSL*DPAGPQ Trigger: CTGTGGCCCAGCTGGATCTCACAAGGACCCAGCTGT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCAGAGCTAGTGCTGGCTTaGCTCAGAGGGCTGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: QQLPGHQESLSVLQGERPELVLA*LRGLGP Trigger: GGGACCCAGCCCTCTGAGGCAAGCCAGCACTAGCTC...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTGGCCCCAGTGGGCAGTaGCTAGAGCTGCCCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HVTLSSESQRRPGGWNRFGPSGQ*LELPLR Trigger: TCTGAGGGGCAGCTCTAGCCACTGCCCACTGGGGCC...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCACCCAGGACAGAAGGCTaGCAGCTGGGTGCCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QQLPGHQESLSVLQGERPPRTEG*QLGASY Trigger: GTAGCTGGCACCCAGCTGCCAGCCTTCTGTCCTGGG...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGCCTGGCCTATTCCCTTaGGTAGAGAGAGGTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: REAQRRGLEETVFSDPGRPGLFP*VERGLP Trigger: GGGCAGACCTCTCTCTACTCAAGGGAATAGGCCAGG...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCGAATGGTCACAAACTTaGATCCGCCCCCAGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: GGSRILSALPVVRPSPQAEWSQT*IRPQNQ Trigger: CTGGTTCTGGGGGCGGATGCAAGTTTGTGACCATTC...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACAGGCTGGAGCTGAGTTaGCTCAGGGTCACTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNRLELS*LRVTGD Trigger: ATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGCTGAGGAATCCTCTATaGGCTAGCAGGGGAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: HRLQAGAELPQGHWGCRWLRNPL*ASRGNP Trigger: TGGGTTTCCCCTGCTAGCCCATAGAGGATTCCTCAG...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACGTCTCAGAGGAGACCTaGCGGGTGGAACAGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNVSEET*RVEQVS Trigger: GGAAACCTGTTCCACCCGCCAGGTCTCCTCTGAGAC...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTGCCTTTGCAGCACCGTaGTCCTTAGTGCCCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCAFAAP*SLVPKE Trigger: TTCCTTGGGCACTAAGGACCACGGTGCTGCAAAGGC...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACATCAGGATGCCCGAGTaGCCTTTGCAGCACCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNIRMPE*PLQHRG Trigger: ACCACGGTGCTGCAAAGGCCACTCGGGCATCCTGAT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCACAGGGGCAAAGCCCATaGAGGCTCAGAGGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QQLPGHQESLSVLQGERPQGQSP*RLRGQS Trigger: ACTCTGACCTCTGAGCCTGCATGGGCTTTGCCCCTG...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTCCAGGACTGGAGCTGTaGTATCTTGCAGACACCACA | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCPGLEL*YLADTT Trigger: TGTGGTGTCTGCAAGATACCACAGCTCCAGTCCTGG...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTCTGACCAGCAGGTGTTaGCAGAGGGGACTGGGATTG | + |
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Preference number: 2 (lower is better) Translates to: LSAQGRATILASSPRQSPLTSRC*QRGLGL Trigger: CAATCCCAGTCCCCTCTGCCAACACCTGCTGGTCAG...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACAGGAGACCTGGCGGGTaGAACAGGTTTCCTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNRRPGG*NRFPEE Trigger: TTCCTCAGGAAACCTGTTCCACCCGCCAGGTCTCCT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR CCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTTCACGACATGACAGCTaGGTCCTTGTGAGATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HKHRLQAGAELPQGHWGCSRHDS*VLVRSS Trigger: GCTGGATCTCACAAGGACCCAGCTGTCATGTCGTGA...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| 3UTR-3UTR GCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCACTCAGCCTAGACCAGTaGACCCACCACTTCAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: QQLPGHQESLSVLQGERPLSLDQ*THHFSY Trigger: GTAGCTGAAGTGGTGGGTGCACTGGTCTAGGCTGAG...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACGGAAACCCAGGCTTTTaGCCACTCTGTTGGCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNGNPGF*PLCWHQ Trigger: CTGATGCCAACAGAGTGGGCAAAAGCCTGGGTTTCC...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTTTTTGCCCACTCTGTTaGCATCAGGGGCACTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSAQGRATILASSPRQSPFCPLC*HQGHCS Trigger: GCTGCAGTGCCCCTGATGCCAACAGAGTGGGCAAAA...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACGTGGAACAGGTTTCCTaGGGAATCCTCTATGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNVEQVS*GILYGL Trigger: TAGCCCATAGAGGATTCCTCAGGAAACCTGTTCCAC...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTTGTGACCCTAAGTTCTaGGTCTCAGAGGAGACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSAQGRATILASSPRQSPCDPKF*VSEETW Trigger: CCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACA...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGACAGTCACCTCTAGCTaGCCTAAAGCCTCAAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQTVTSS*PKASSS Trigger: GCTACTTGAGGCTTTAGGTCAGCTAGAGGTGACTGT...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTCCTCCTGACAGGGCCTaGCCTATTCCCTTGAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HVTLSSESQRRPGGWNRFPPDRA*PIPLSR Trigger: TCTACTCAAGGGAATAGGCCAGGCCCTGTCAGGAGG...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | ACACACGAACCTGGCCTAGGGCCCTGCTGGCCCCAGTaGGCAGTGGCTAGAGCTGCCCCTCAGACCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: THEPGLGPCWPQ*AVARAAPQTLV Trigger: CACCAGGGTCTGAGGGGCAGCTCTAGCCACTGCCCACTGGGGCCAGCAGGGCCCTAGGCCAGGTTCGTGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | ACAGAAGGCTGGCAGCTGGGTGCCAGCTACCCAACCTaGGGCATAGCCACCATCACTCCCTGCCCCGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: TEGWQLGASYPT*GIATITPCPAL Trigger: GAGTGCGGGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGCCAGCCTTCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR GCA 72 bp | CCTCCATCCCCTGCTCTTTCGCAACTGGCCTTGGAATaGCAGGAGCCAACAGGGAGCCTGCGGGGCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPSPALSQLALE*QEPTGSLRGLE Trigger: CTCTAGGCCCCGCAGGCTCCCTGTTGGCTCCTGGCATTCCAAGGCCAGTTGCGAAAGAGCAGGGGATGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGAGAGCTAGTGCTGGCTaGCCTCAGAGGGCTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSALPVVRPSPQATEDRLRASAG*PQRAGS Trigger: GGACCCAGCCCTCTGAGGCAAGCCAGCACTAGCTCT...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGAGCTGGGCCACAGCCTaGCCTGCAGCATGTGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSALPVVRPSPQATEDRLSWATA*PAACDP Trigger: AGGGTCACATGCTGCAGGCAAGGCTGTGGCCCAGCT...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCCAGAGGGGACTGGGATaGGTGGCATCTTGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGSRILSALPVVRPSPQAQRGLG*VASWGG Trigger: CCCACCCCAAGATGCCACCAATCCCAGTCCCCTCTG...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | GCAGGCAGAAGAATCCAAGATTGGAAGCCTCTAGGCTaGGCCCTCTCTGGGCCCGGCCCTGTGTCCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: AGRRIQDWKPLG*ALSGPGPVSLT Trigger: TGTGAGGGACACAGGGCCGGGCCCAGAGAGGGCTCAGCCTAGAGGCTTCCAATCTTGGATTCTTCTGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR GCA 72 bp | ACCATCACTCCCTGCCCCGCACTCAGCCTAGACCAGTaGACCCACCACTTCAGCTACACACGAACCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TITPCPALSLDQ*THHFSYTRTWP Trigger: AGGCCAGGTTCGTGTGTAGCTGAAGTGGTGGGTGCACTGGTCTAGGCTGAGTGCGGGGCAGGGAGTGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | CACCTCCTGGCACCATCCTTGCCTCCTGACAGGGCCTaGCCTATTCCCTTGAGTAGAGAGAGGTCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLAPSLPPDRA*PIPLSRERSAQ Trigger: CTGGGCAGACCTCTCTCTACTCAAGGGAATAGGCCAGGCCCTGTCAGGAGGCAAGGATGGTGCCAGGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCACTCCTGGCACCATCCTaGCCTCCTGACAGGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QQLPGHQESLSVLQGERPLLAPS*PPDRAW Trigger: CCAGGCCCTGTCAGGAGGCAAGGATGGTGCCAGGAG...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGGGGAAACCCAGGCTTTaGCCCACTCTGTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: HRLQAGAELPQGHWGCRWGKPRL*PTLLAS Trigger: TGATGCCAACAGAGTGGGCAAAAGCCTGGGTTTCCC...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGGCCTGGCCTATTCCCTaGAGTAGAGAGAGGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: REAQRRGLEETVFSDPGRAWPIP*SRERSA Trigger: GGCAGACCTCTCTCTACTCAAGGGAATAGGCCAGGC...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGTCTGACCAGCAGGTGTaGGCAGAGGGGACTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQSDQQV*AEGTGI Trigger: AATCCCAGTCCCCTCTGCCAACACCTGCTGGTCAGA...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGAGAATGGTCACAAACTaGCATCCGCCCCCAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: HRLQAGAELPQGHWGCRWRMVTN*HPPPEP Trigger: TGGTTCTGGGGGCGGATGCAAGTTTGTGACCATTCT...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGACTAAATCTCTGCAGTaGTTCCCCGCCTGCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: REAQRRGLEETVFSDPGRTKSLQ*FPACPR Trigger: CCTGGGGCAGGCGGGGAACAACTGCAGAGATTTAGT...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | GTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTCCTaGGGAATCCTCTATGGGCTAGCAGGGGAAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSEETWRVEQVS*GILYGLAGETQ Trigger: CTGGGTTTCCCCTGCTAGCCCATAGAGGATTCCTCAGGAAACCTGTTCCACCCGCCAGGTCTCCTCTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | GCCACAGCCTTGCCTGCAGCATGTGACCCTAAGTTCTaGGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATALPAACDPKF*VSEETWRVEQV Trigger: AACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATGCTGCAGGCAAGGCTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | GAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTaGAAGGGCCCACTGATGGGGACACAAGACCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EERTRRDSFLGP*KGPLMGTQDPA Trigger: GGCTGGGTCTTGTGTCCCCATCAGTGGGCCCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTTGGAGCTGTGGTATCTaGCAGACACCACAGGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: HKHRLQAGAELPQGHWGCWSCGI*QTPQDA Trigger: TGCATCCTGTGGTGTCTGCAAGATACCACAGCTCCA...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTCTTTTGCCCACTCTGTaGGCATCAGGGGCACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSAQGRATILASSPRQSPLLPTL*ASGALQ Trigger: CTGCAGTGCCCCTGATGCCAACAGAGTGGGCAAAAG...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | CGCCTCATACCACCGTTGGGTTTGGCAGAGAGCCAGTaGGTGACACTTGCACCCAGTGGTTTTGGAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLIPPLGLAESQ*VTLAPSGFGAS Trigger: GCTTGCTCCAAAACCACTGGGTGCAAGTGTCACTCACTGGCTCTCTGCCAAACCCAACGGTGGTATGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR GCA 72 bp | AGGAGCACAAACACCGACTCCAGGCTGGAGCTGAGTTaGCTCAGGGTCACTGGGGATGTAGATGGAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: RSTNTDSRLELS*LRVTGDVDGEL Trigger: AAGTTCTCCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR GCA 72 bp | ACCGTTGGGTTTGGCAGAGAGCCAGTGAGTGACACTTaGACCCAGTGGTTTTGGAGCAAGCCAAACCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVGFGREPVSDT*TQWFWSKPNQD Trigger: GTCTTGGTTTGGCTTGCTCCAAAACCACTGGGTGCAAGTGTCACTCACTGGCTCTCTGCCAAACCCAACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | TCATACCACCGTTGGGTTTGGCAGAGAGCCAGTGAGTaGCACTTGCACCCAGTGGTTTTGGAGCAAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYHRWVWQRASE*HLHPVVLEQAK Trigger: TTTGGCTTGCTCCAAAACCACTGGGTGCAAGTGTCACTCACTGGCTCTCTGCCAAACCCAACGGTGGTATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR GCA 72 bp | ACATTAATGAAGGGGAGTAGAGAATGGTCACAAACTTaGATCCGCCCCCAGAACCAGGGTCAGCTCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLMKGSREWSQT*IRPQNQGQLLQ Trigger: CTGCAGGAGCTGACCCTGGTTCTGGGGGCGGATGCAAGTTTGTGACCATTCTCTACTCCCCTTCATTAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | GTACAAAGGCTGATCAGTTTAAAATGTGACCGACACTaGGATGCTGTGATGTCACCCAGGCCGAGGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VQRLISLKCDRH*DAVMSPRPRGS Trigger: GCTTCCCCTCGGCCTGGGTGACATCACAGCATCTCAGTGTCGGTCACATTTTAAACTGATCAGCCTTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | GTGAGATGGGACACAGTGGACCCACATAGGTGCTTCTaGGACAAGAGATTTTACTCAACAACTCCCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VRWDTVDPHRCF*DKRFYSTTPRA Trigger: TGCCCTGGGAGTTGTTGAGTAAAATCTCTTGTCCCAGAAGCACCTATGTGGGTCCACTGTGTCCCATCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | AGAGAGCCAGTGAGTGACACTTGCACCCAGTGGTTTTaGAGCAAGCCAAACCAAGACTTAGGAACTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: REPVSDTCTQWF*SKPNQDLGTVR Trigger: TCTGACAGTTCCTAAGTCTTGGTTTGGCTTGCTCCAAAACCACTGGGTGCAAGTGTCACTCACTGGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CCA 72 bp | TTTGGCAGAGAGCCAGTGAGTGACACTTGCACCCAGTaGTTTTGGAGCAAGCCAAACCAAGACTTAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: FGREPVSDTCTQ*FWSKPNQDLGT Trigger: AGTTCCTAAGTCTTGGTTTGGCTTGCTCCAAAACCACTGGGTGCAAGTGTCACTCACTGGCTCTCTGCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR TCA 72 bp | CATACTGGCCTCATCACCAAGACAGTCACCTCTAGCTaGCCTAAAGCCTCAAGTAGCCTTTGCAAAATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTGLITKTVTSS*PKASSSLCKMG Trigger: TCCCATTTTGCAAAGGCTACTTGAGGCTTTAGGTCAGCTAGAGGTGACTGTCTTGGTGATGAGGCCAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGGGTGCCAGCTACCCAACCTGGGGCATAGCCACCATCACTCCCTGCCCGGTAGCCAGGGTCTGTaGCTCGCCGCTCCTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGCQLPNLGHSHHHSLPGSQGL*LAAPRC Trigger: ACAGCGAGGAGCGGCGAGCCACAGACCCTGGCTACC...GGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGGGTGCCAGCTACCCAACCTGGGGCATAGCCACCATCACTCCCTGCCCTGCCCTTCCACACGGTaGTGGGCTTGGGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAGCQLPNLGHSHHHSLPCPSTR*WAWGSQ Trigger: CTGGCTACCCCAAGCCCATCACCGTGTGGAAGGGCA...GGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGGGCAGAGGGACAGTGTaGAGGGGACAACCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSALPVVRPSPQATEDRLGRGTV*RGQPQP Trigger: TGGCTGTGGTTGTCCCCTGCACACTGTCCCTCTGCC...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGGTTTGGCACCTGGAGTaGATGGCCGGTCCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSALPVVRPSPQATEDRLVWHLE*MAGPQE Trigger: CTCTTGGGGACCGGCCATCCACTCCAGGTGCCAAAC...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTGCCGCTTATAGTAGGTaGCGGGCTGAGGACCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKHRLQAGAELPQGHWGCAAYSR*RAEDPP Trigger: AGGCGGGTCCTCAGCCCGTCACCTACTATAAGCGGC...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CAA 72 bp | GGGCTGGGTCCCAGCCAGGACTGGAGCTGTGGTATCTaGCAGACACCACAGGATGCAATGACCTCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSQDWSCGI*QTPQDAMTSGA Trigger: TGCCCCTGAGGTCATTGCATCCTGTGGTGTCTGCAAGATACCACAGCTCCAGTCCTGGCTGGGACCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACCCTGCACCCGGTTATTaGGCAGGCGCCAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNPAPGY*AGARTS Trigger: GCTGGTTCTGGCGCCTGCGCAATAACCGGGTGCAGG...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGAGCTCCCCCAAGCTGTaGGGGTACCCAGGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQSSPKL*GYPGST Trigger: GGTGGAACCTGGGTACCCCCACAGCTTGGGGGAGCT...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGCACACATCGAAAGCCTaGCGAATAGCCTTCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSALPVVRPSPQATEDRLHTSKA*RIAFRV Trigger: CACACGGAAGGCTATTCGTCAGGCTTTCGATGTGTG...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTCATAGGCTGCGTCTATaGGGGCGGGCAGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFHRLRL*GRAGPS Trigger: GGAAGGGCCTGCCCGCCCGCATAGACGCAGCCTATG...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGTCCAAGCCCAGTGCATaGCCCAGTTCATGCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: REAQRRGLEETVFSDPGRSKPSA*PSSCTA Trigger: GGCCGTGCATGAACTGGGCCATGCACTGGGCTTGGA...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGCTCTCAGATGGCGAGTaGATCCTGCGGACCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQLSDGE*ILRTGS Trigger: ACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAG...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTGTTGGGTTTGGCACCTaGAGTGGATGGCCGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPVGFGT*SGWPVP Trigger: GGGGACCGGCCATCCACTCCAGGTGCCAAACCCAAC...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTGTTGCGTGGGTAGCCTaGCTCCACGCTCAGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKHRLQAGAELPQGHWGCVAWVA*LHAQFL Trigger: CAGAAACTGAGCGTGGAGCCAGGCTACCCACGCAAC...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACAGCTCTTTCATAGGCTaGGTCTATGCGGGCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNSSFIG*VYAGGQ Trigger: CTGCCCGCCCGCATAGACGCAGCCTATGAAAGAGCT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACGTGCTTCCTCTCAGATaGCGAGTGGATCCTGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNVLPLR*RVDPAD Trigger: GTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCAC...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTACGCAGGATGTTGCGTaGGTAGCCTGGCTCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPTQDVA*VAWLHA Trigger: AGCGTGGAGCCAGGCTACCCACGCAACATCCTGCGT...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | ATAGCCACCATCACTCCCTGCCCCGCACTCAGCCTAGACCAGTGCACCCACCACTCATCTGAATCAAAGTaGGTGTCTCCTCCGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IATITPCPALSLDQCTHHSSESK*VSPPIP Trigger: AGGGATCGGAGGAGACACTCACTTTGATTCAGATGA...GTGGTGGGTGCACTGGTCTAGGCTGAGTGCGGGGCAGGGAGTGATGGTGGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCCGTCCAGGGTTCATCTaGATCAAAGTGAGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSRILSALPVVRPSPQARPGFI*IKVSVS Trigger: GGAGACACTCACTTTGATTCAGATGAACCCTGGACG...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACCTGGGGTCATTAGAGTaGTCCAAGCCCAGTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNLGSLE*SKPSAW Trigger: CCATGCACTGGGCTTGGAGCACTCTAATGACCCCAG...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCACGCAGATGTTGGGTTTaGCACCTGGAGTGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQLPGHQESLSVLQGERPRRCWV*HLEWMA Trigger: GGCCATCCACTCCAGGTGCCAAACCCAACATCTGCG...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACACTGTTCGATCTGCATaGGGTAGCCTTCCTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNTVRSA*GSLPAP Trigger: GGGTGCAGGAAGGCTACCCCATGCAGATCGAACAGT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| 3UTR CAA 72 bp | TTTGCCCACTCTGTTGGCATCAGGGGCACTGCAGCCTaGGAGGATAGTAGGGTAGGGATGAGGGGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FAHSVGIRGTAA*EDSRVGMRGHL Trigger: CAGATGTCCCCTCATCCCTACCCTACTATCCTCCAAGGCTGCAGTGCCCCTGATGCCAACAGAGTGGGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACGATCCAACACACCGGTaGCTGGGATCCCGTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNDPTHR*LGSRKT Trigger: AGTTTTACGGGATCCCAGTCACCGGTGTGTTGGATC...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTCACTCGATTGTTGTCTaGTCCAACACACCGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HKHRLQAGAELPQGHWGCHSIVV*SNTPVT Trigger: AGTCACCGGTGTGTTGGATCAGACAACAATCGAGTG...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTCCTTCCGGTCACTTTTaGTCTCATGGTATGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HKHRLQAGAELPQGHWGCPSGHF*SHGMAP Trigger: AGGTGCCATACCATGAGATCAAAAGTGACCGGAAGG...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCACAGAGGACAGGCTGGAAGATCATGATGTCTaGCTCCTTCCGGTCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSALPVVRPSPQATEDRLEDHDV*LLPVTF Trigger: AAAAGTGACCGGAAGGAGGCAGACATCATGATCTTC...CAGCCTGTCCTCTGTGGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTGTGCTCCAAGCCCAGTaGATGGCCCAGTTCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFVLQAQ*MAQFMH Trigger: GTGCATGAACTGGGCCATGCACTGGGCTTGGAGCAC...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTCGCTCTACCTCCTTCTaGTTGCAGCCCATCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPRSTSF*LQPIQS Trigger: TGACTGGATGGGCTGCAAGCAGAAGGAGGTAGAGCG...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTATCTTCTGGATGCCCTaGAGATCGTCCTGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPIFWMP*RSSCGS Trigger: GCTACCGCAGGACGATCTCCAGGGCATCCAGAAGAT...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTCTCCAGAGGCTCAGCTaGGGGTCCGTAAATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPLQRLS*GSVNLL Trigger: CAGAAGATTTACGGACCCCCAGCTGAGCCTCTGGAG...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CAACAACTCCCAGGGCATCAAGAGTCTCTGTCTGTGCTACAGGGCGAGAGACCAAGCGTTCACAGAGCCTaGCACGTCATCGATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQLPGHQESLSVLQGERPSVHRA*HVIDGH Trigger: GTGACCATCGATGACGTGCCAGGCTCTGTGAACGCT...TGGTCTCTCGCCCTGTAGCACAGACAGAGACTCTTGATGCCCTGGGAGTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCAGTACTTGTCTCCTTTaGAGAAGACGAATCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRILSALPVVRPSPQASTCLL*RRRISR Trigger: ACGGGAGATTCGTCTTCTTCAAAGGAGACAAGTACT...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCCAGCTCACCCACCTTTaGGGTATAATTGTGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRILSALPVVRPSPQAQLTHL*GIIVNA Trigger: AGCATTCACAATTATACCCCAAAGGTGGGTGAGCTG...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGTGTGAATGCTGTAGGTaGTGTGTTTCTGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: REAQRRGLEETVFSDPGRCECCR*CVSAST Trigger: AGTGGAGGCAGAAACACATCACCTACAGCATTCACA...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTCATCGATGGTCACCATaGTGTCCACATCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFHRWSP*CPHHPG Trigger: CCCAGGATGATGTGGACATCATGGTGACCATCGATG...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTAGAATGCAACGCAGATaGCCGCGACTCATAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFRMQRR*PRLIGK Trigger: CTTCCCTATGAGTCGCGGGCATCTGCGTTGCATTCT...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCTTTGATCTCATGGTATaGCACCTCTTCAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSRILSALPVVRPSPQAFDLMV*HLFKGQ Trigger: CTGACCTTTGAAGAGGTGCCATACCATGAGATCAAA...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACAGGTCATTGCCATCATaGTTGGCATTTCCTAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNRSLPS*LAFPSV Trigger: GACGCTAGGAAATGCCAACCATGATGGCAATGACCT...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGCCCAAGGAAGGGCCACCATACTGGCCTCATCACCAAGACAGTCACCTTATTTCTCCTCCTCCTaGTCAAGTGGGGATGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAQGRATILASSPRQSPYFSSS*SSGDDQ Trigger: CTGATCATCCCCACTTGAGCAGGAGGAGGAGAAATA...AGGTGACTGTCTTGGTGATGAGGCCAGTATGGTGGCCCTTCCTTGGGCACTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR TCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTAGTATCGTTCGCCTTTaGAGAAGTAGGTTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFSIVRL*RSRFCP Trigger: TGGGCAAAACCTACTTCTTCAAAGGCGAACGATACT...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CCA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTTCACTTTTGATCTCATaGTATGGCACCTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVTLSSESQRRPGGWNRFSLLIS*YGTSSK Trigger: CTTTGAAGAGGTGCCATACCATGAGATCAAAAGTGA...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS GCA 90 bp | GGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTTGGGTGCCGCTCGTaGTTCCTCTCAGATGGCGAGTGGATCCTGCGGACCGGGAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRSPRGGRGGLGCRS*FLSDGEWILRTGSV Trigger: TACACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS GCA 90 bp | GGAGTGGATGGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTTGGGTaGCGCTCGTGCTTCCTCTCAGATGGCGAGTGGATCCTGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GVDGRSPRGGRGGLG*RSCFLSDGEWILRT Trigger: GGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCACTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | CGTGGGGGCCTTGGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTaGATCCTGCGGACCGGGAGTGTAGGGAGGGGCCTTGTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGLGCRSCFLSDGE*ILRTGSVGRGLVGS Trigger: GGAGCCCACAAGGCCCCTCCCTACACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | AGGCGGCCGTGGGGGCCTTGGGTGCCGCTCGTGCTTCCTCTCAGATaGCGAGTGGATCCTGCGGACCGGGAGTGTAGGGAGGGGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRPWGPWVPLVLPLR*RVDPADRECREGPC Trigger: ACAAGGCCCCTCCCTACACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | ACCTGGAGTGGATGGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTTaGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTGGATCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TWSGWPVPKRRPWGP*VPLVLPLRWRVDPA Trigger: CGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCACTCCAGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | GGGTTTGGCACCTGGAGTGGATGGCCGGTCCCCAAGAGGCGGCCGTaGGGGCCTTGGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFGTWSGWPVPKRRP*GPWVPLVLPLRWRV Trigger: CACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCACTCCAGGTGCCAAACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTCTAGAATCCTCTCTGCTTTACCTGTAGTCAGGCCGAGCCCCCAGGCCGCTGATGAAGGCCCCTaGCGGAGCCTGCGGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSRILSALPVVRPSPQAADEGP*RSLRDA Trigger: GGCATCCCGCAGGCTCCGCAAGGGGCCTTCATCAGC...GGCCTGGGGGCTCGGCCTGACTACAGGTAAAGCAGAGAGGATTCTAGAGCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | CGTCTATGCGGGCGGGCAGGCCCTTCCAGAACTGTTCGATCTGCATaGGGTAGCCTTCCTGCACCCGGTTATTGCGCAGGCGCCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RLCGRAGPSRTVRSA*GSLPAPGYCAGART Trigger: GGTTCTGGCGCCTGCGCAATAACCGGGTGCAGGAAGGCTACCCCATGCAGATCGAACAGTTCTGGAAGGGCCTGCCCGCCCGCATAGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CAA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGTCCTGCACCCGGTTATaGCGCAGGCGCCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLQAGAELPQGHWGCRWSCTRL*RRRQNQ Trigger: CTGGTTCTGGCGCCTGCGCAATAACCGGGTGCAGGA...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS TCA 90 bp | CAGCCACAGCGTTCACAGAGCCTGGCACGTCATCGATGGTCACCATaGTGTCCACATCATCCTGGGGCAGCCTCCGCTCCTTACGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPQRSQSLARHRWSP*CPHHPGAASAPYAA Trigger: AGCGGCGTAAGGAGCGGAGGCTGCCCCAGGATGATGTGGACATCATGGTGACCATCGATGACGTGCCAGGCTCTGTGAACGCTGTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CAA 90 bp | ATAGCCACCATCACTCCCTGCCCCGCACTCAGCCTAGACCAGTGCACCCACCACTCTACCTCCTTCTGCTaGCAGCCCATCCAGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: IATITPCPALSLDQCTHHSTSFC*QPIQSR Trigger: GCGTGACTGGATGGGCTGCAAGCAGAAGGAGGTAGA...GTGGTGGGTGCACTGGTCTAGGCTGAGTGCGGGGCAGGGAGTGATGGTGGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | GAGCCTGGCACGTCATCGATGGTCACCATGATGTCCACATCATCCTaGGGCAGCCTCCGCTCCTTACGCCGCTCTACCTCCTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPGTSSMVTMMSTSS*GSLRSLRRSTSFCL Trigger: CAAGCAGAAGGAGGTAGAGCGGCGTAAGGAGCGGAGGCTGCCCCAGGATGATGTGGACATCATGGTGACCATCGATGACGTGCCAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGGGTGCCAGCTACCCAACCTGGGGCATAGCCACCATCACTCCCTGCCCTCATTGCCATCATGGTaGGCATTTCCTAGCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGCQLPNLGHSHHHSLPSLPSW*AFPSVQ Trigger: CTGGACGCTAGGAAATGCCAACCATGATGGCAATGA...GGGCAGGGAGTGATGGTGGCTATGCCCCAGGTTGGGTAGCTGGCACCCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS TCA 90 bp | CTGTGGCTCGCCGCTCCTCGCTGTAGCGCCAGTATCGTTCGCCTTTaGAGAAGTAGGTTTTGCCCACAGGTTCCCAGCGCAGAGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWLAAPRCSASIVRL*RSRFCPQVPSAELC Trigger: ACACAGCTCTGCGCTGGGAACCTGTGGGCAAAACCTACTTCTTCAAAGGCGAACGATACTGGCGCTACAGCGAGGAGCGGCGAGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
||
| CDS CCA 90 bp | GGACAGTGTGCAGGGGACAACCACAGCCACAGCGTTCACAGAGCCTaGCACGTCATCGATGGTCACCATGATGTCCACATCATCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQCAGDNHSHSVHRA*HVIDGHHDVHIILG Trigger: CCCCAGGATGATGTGGACATCATGGTGACCATCGATGACGTGCCAGGCTCTGTGAACGCTGTGGCTGTGGTTGTCCCCTGCACACTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGTCGCAGATGTTGGGTTaGGCACCTGGAGTGGATGGC | + |
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Preference number: 5 (lower is better) Translates to: REAQRRGLEETVFSDPGRSQMLG*APGVDG Trigger: GCCATCCACTCCAGGTGCCAAACCCAACATCTGCGA...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAGATGGTCATCCACTCGATTGTaGTCTGATCCAACACACCGG | + |
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Preference number: 5 (lower is better) Translates to: HRLQAGAELPQGHWGCRWSSTRL*SDPTHR Trigger: CCGGTGTGTTGGATCAGACAACAATCGAGTGGATGA...CCATCTACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGTTGCCATCGCAGATGTaGGGTTTGGCACCTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQLPSQM*GLAPGV Trigger: CACTCCAGGTGCCAAACCCAACATCTGCGATGGCAA...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTAAGAGGGCCACTGTGTaGAAGTTGCCATCGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: HKHRLQAGAELPQGHWGCKRATV*KLPSQM Trigger: CATCTGCGATGGCAACTTCAACACAGTGGCCCTCTT...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGTCGTCCTGCGGTAGCTaGAAGTTGTGTGTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: REAQRRGLEETVFSDPGRSSCGS*KLCVSM Trigger: CATGGAGACACACAACTTCAAGCTACCGCAGGACGA...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGCCAGCTCACCCACCTTaGGGGTATAATTGTGAATGC | + |
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Preference number: 5 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQPAHPP*GYNCEC Trigger: GCATTCACAATTATACCCCAAAGGTGGGTGAGCTGG...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGCAGAACCAGCGATCCTaGAACACAAACATCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQQNQRS*NTNISP Trigger: AGGGGAGATGTTTGTGTTCAAGGATCGCTGGTTCTG...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGACCAGGAAGAGGTCATaGCCATCATGGTTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: REAQRRGLEETVFSDPGRTRKRS*PSWLAF Trigger: AAATGCCAACCATGATGGCAATGACCTCTTCCTGGT...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CACAAACACCGACTCCAGGCTGGAGCTGAGTTGCCTCAGGGTCACTGGGGATGTCGCCTTGTTCTTGAATaGGAAGATAGTGTAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HKHRLQAGAELPQGHWGCRLVLE*EDSVEQ Trigger: CTGCTCTACACTATCTTCCAATTCAAGAACAAGGCG...ACATCCCCAGTGACCCTGAGGCAACTCAGCTCCAGCCTGGAGTCGGTGTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCCCAGAGGAGAGGACTAGAAGAGACAGTTTTCTCGGACCCTGGAAGGTCTTCATCCACTCGATaGTTGTCTGATCCAACACAC | + |
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Preference number: 5 (lower is better) Translates to: REAQRRGLEETVFSDPGRSSSTR*LSDPTH Trigger: GTGTGTTGGATCAGACAACAATCGAGTGGATGAAGA...CCTTCCAGGGTCCGAGAAAACTGTCTCTTCTAGTCCTCTCCTCTGGGCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTTCCTTCCGGTCACTTTaGATCTCATGGTATGGCACC | + |
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Preference number: 5 (lower is better) Translates to: HVTLSSESQRRPGGWNRFSFRSL*ISWYGT Trigger: GGTGCCATACCATGAGATCAAAAGTGACCGGAAGGA...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGGCTGCTACCAGCTGGGAAGAGGACCCTTTTTCTAAGAGCAGTGCAGTCCACCGTCACTTCTTaGAAAACCCAGTACTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SLGLLPAGKRTLFLRAVQSTVTS*KTQYLS Trigger: AGACAAGTACTGGGTTTTCAAAGAAGTGACGGTGGA...CTGCACTGCTCTTAGAAAAAGGGTCCTCTTCCCAGCTGGTAGCAGCCCCAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 90 bp | TCCACTTCTGTCCAGTTAGGGCATATCGCTTATTTCTCCTCCTCCTaGTCAAGTGGGGATGATCAGGGACGCCACATCGAGGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: STSVQLGHIAYFSSS*SSGDDQGRHIEVSS Trigger: TGAAGAAACCTCGATGTGGCGTCCCTGATCATCCCCACTTGAGCAGGAGGAGGAGAAATAAGCGATATGCCCTAACTGGACAGAAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CATGTGACCCTAAGTTCTGAGTCTCAGAGGAGACCTGGCGGGTGGAACAGGTTTTGCGGTAGCTTGAAGTaGTGTGTCTCCATGTATTGG | + |
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Preference number: 5 (lower is better) Translates to: HVTLSSESQRRPGGWNRFCGSLK*CVSMYW Trigger: CCAATACATGGAGACACACAACTTCAAGCTACCGCA...AAACCTGTTCCACCCGCCAGGTCTCCTCTGAGACTCAGAACTTAGGGTCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS-3UTR CAA 90 bp | CAGGAAGATGGACCCAGAGACCTGGGCTGCCAGGGTCAAGATAGGAGCACAAACTTGAAAACCCAGTACTaGTCTCCTTTGAAGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: QEDGPRDLGCQGQDRSTNLKTQY*SPLKKT Trigger: CGTCTTCTTCAAAGGAGACAAGTACTGGGTTTTCAA...GTTTGTGCTCCTATCTTGACCCTGGCAGCCCAGGTCTCTGGGTCCATCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS TCA 90 bp | GTTAGGGCATATCGCTTATTTCTCCTCCTCCTGCTCAAGTGGGGATaGTCAGGGACGCCACATCGAGGTTTCTTCATCCACTCGATTGTT | + |
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Preference number: 5 (lower is better) Translates to: VRAYRLFLLLLLKWG*SGTPHRGFFIHSIV Trigger: AACAATCGAGTGGATGAAGAAACCTCGATGTGGCGTCCCTGATCATCCCCACTTGAGCAGGAGGAGGAGAAATAAGCGATATGCCCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 72 bp | GGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTTGGGTaGCGCTCGTGCTTCCTCTCAGATGGCGAGTGGATC | + |
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Preference number: 6 (lower is better) Translates to: GRSPRGGRGGLG*RSCFLSDGEWI Trigger: GATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | GGATGGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTTaGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: GWPVPKRRPWGP*VPLVLPLRWRV Trigger: CACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 90 bp | CACCTGGAGTGGATGGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTaGGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTGGATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: HLEWMAGPQEAAVGA*GAARASSQMASGSC Trigger: GCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCACTCCAGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 72 bp | CCAAGAGGCGGCCGTGGGGGCCTTGGGTGCCGCTCGTaGTTCCTCTCAGATGGCGAGTGGATCCTGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: PRGGRGGLGCRS*FLSDGEWILRT Trigger: GGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | ACCTGGAGTGGATGGCCGGTCCCCAAGAGGCGGCCGTaGGGGCCTTGGGTGCCGCTCGTGCTTCCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TWSGWPVPKRRP*GPWVPLVLPLR Trigger: TCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCACTCCAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 72 bp | TGGATGGCCGGTCCCCAAGAGGCGGCCGTGGGGGCCTaGGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: WMAGPQEAAVGA*GAARASSQMAS Trigger: ACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCACGGCCGCCTCTTGGGGACCGGCCATCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | TGGGGGCCTTGGGTGCCGCTCGTGCTTCCTCTCAGATaGCGAGTGGATCCTGCGGACCGGGAGTGTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: WGPWVPLVLPLR*RVDPADRECRE Trigger: CTCCCTACACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAGGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | CTTGGGTGCCGCTCGTGCTTCCTCTCAGATGGCGAGTaGATCCTGCGGACCGGGAGTGTAGGGAGGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LGCRSCFLSDGE*ILRTGSVGRGL Trigger: AAGGCCCCTCCCTACACTCCCGGTCCGCAGGATCCACTCGCCATCTGAGAGGAAGCACGAGCGGCACCCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | GGGCGGGCAGGCCCTTCCAGAACTGTTCGATCTGCATaGGGTAGCCTTCCTGCACCCGGTTATTGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GRAGPSRTVRSA*GSLPAPGYCAG Trigger: GCCTGCGCAATAACCGGGTGCAGGAAGGCTACCCCATGCAGATCGAACAGTTCTGGAAGGGCCTGCCCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 72 bp | GGCAGCCTCCGCTCCTTACGCCGCTCTACCTCCTTCTaGTTGCAGCCCATCCAGTCACGCAGGATGTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: GSLRSLRRSTSF*LQPIQSRRMLR Trigger: ACGCAACATCCTGCGTGACTGGATGGGCTGCAAGCAGAAGGAGGTAGAGCGGCGTAAGGAGCGGAGGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS TCA 72 bp | CGTTCACAGAGCCTGGCACGTCATCGATGGTCACCATaGTGTCCACATCATCCTGGGGCAGCCTCCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSQSLARHRWSP*CPHHPGAASAP Trigger: AGGAGCGGAGGCTGCCCCAGGATGATGTGGACATCATGGTGACCATCGATGACGTGCCAGGCTCTGTGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | ACGTCATCGATGGTCACCATGATGTCCACATCATCCTaGGGCAGCCTCCGCTCCTTACGCCGCTCTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSSMVTMMSTSS*GSLRSLRRSTS Trigger: GGAGGTAGAGCGGCGTAAGGAGCGGAGGCTGCCCCAGGATGATGTGGACATCATGGTGACCATCGATGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS TCA 72 bp | GCCGCTCCTCGCTGTAGCGCCAGTATCGTTCGCCTTTaGAGAAGTAGGTTTTGCCCACAGGTTCCCAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: AAPRCSASIVRL*RSRFCPQVPSA Trigger: TGCGCTGGGAACCTGTGGGCAAAACCTACTTCTTCAAAGGCGAACGATACTGGCGCTACAGCGAGGAGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 72 bp | CGAATCTCCCGTCAGCTCTTTCATAGGCTGCGTCTATaGGGGCGGGCAGGCCCTTCCAGAACTGTTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: RISRQLFHRLRL*GRAGPSRTVRS Trigger: AGATCGAACAGTTCTGGAAGGGCCTGCCCGCCCGCATAGACGCAGCCTATGAAAGAGCTGACGGGAGATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | GCAGGGGACAACCACAGCCACAGCGTTCACAGAGCCTaGCACGTCATCGATGGTCACCATGATGTCCACATC | + |
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Preference number: 6 (lower is better) Translates to: AGDNHSHSVHRA*HVIDGHHDVHI Trigger: GATGTGGACATCATGGTGACCATCGATGACGTGCCAGGCTCTGTGAACGCTGTGGCTGTGGTTGTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 72 bp | GTAGGTGTAATATCCTTCCTTGCTGATGAAGGCCCCTaGCGGAGCCTGCGGGATGCCCTTCCACACGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VGVISFLADEGP*RSLRDALPHGD Trigger: ATCACCGTGTGGAAGGGCATCCCGCAGGCTCCGCAAGGGGCCTTCATCAGCAAGGAAGGATATTACACCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 72 bp | GTAGGTGACGGGCTGAGGACCCGCCTTGTTCTTGAATaGGAAGATAGTGTAGAGCAGCACCAGGAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VGDGLRTRLVLE*EDSVEQHQEAE Trigger: CTCTGCCTCCTGGTGCTGCTCTACACTATCTTCCAATTCAAGAACAAGGCGGGTCCTCAGCCCGTCACCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 90 bp | CCGCTTATAGTAGGTGACGGGCTGAGGACCCGCCTTGTTCTTGAATaGGAAGATAGTGTAGAGCAGCACCAGGAGGCAGAGGGACAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PLIVGDGLRTRLVLE*EDSVEQHQEAEGQC Trigger: ACACTGTCCCTCTGCCTCCTGGTGCTGCTCTACACTATCTTCCAATTCAAGAACAAGGCGGGTCCTCAGCCCGTCACCTACTATAAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS GCA 72 bp | GTCCAGTTAGGGCATATCGCTTATTTCTCCTCCTCCTaGTCAAGTGGGGATGATCAGGGACGCCACATCGAG | + |
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Preference number: 6 (lower is better) Translates to: VQLGHIAYFSSS*SSGDDQGRHIE Trigger: CTCGATGTGGCGTCCCTGATCATCCCCACTTGAGCAGGAGGAGGAGAAATAAGCGATATGCCCTAACTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | ATGATGTCTGCCTCCTTCCGGTCACTTTTGATCTCATaGTATGGCACCTCTTCAAAGGTCAGTGGAGTCACC | + |
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Preference number: 6 (lower is better) Translates to: MMSASFRSLLIS*YGTSSKVSGVT Trigger: GGTGACTCCACTGACCTTTGAAGAGGTGCCATACCATGAGATCAAAAGTGACCGGAAGGAGGCAGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CAA 72 bp | AAGCTGTGGGGGTACCCAGGTTCCACCGTCACTTCTTaGAAAACCCAGTACTTGTCTCCTTTGAAGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: KLWGYPGSTVTS*KTQYLSPLKKT Trigger: CGTCTTCTTCAAAGGAGACAAGTACTGGGTTTTCAAAGAAGTGACGGTGGAACCTGGGTACCCCCACAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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| CDS CCA 72 bp | ACGAATAGCCTTCCGTGTGTCCAGCTCACCCACCTTTaGGGTATAATTGTGAATGCTGTAGGTGATGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: TNSLPCVQLTHL*GIIVNAVGDVF Trigger: AAACACATCACCTACAGCATTCACAATTATACCCCAAAGGTGGGTGAGCTGGACACACGGAAGGCTATTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029141.6 |
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