Pregenerated sensors for MMP21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030981Ensembl transcript IDs: ENSMUST00000033278.8, ENSMUST00000122136.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATGGAGTTGTGTGCATAGGAGTAGTACGCTGAATCGAGGTTTCTaGATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: RWSCVHRSSTLNRGF*MGGFEALLLETLGS Trigger: TGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTCGATTCAGCGTACTACTCCTATGCACACAACTCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR CAA 90 bp | GGAAATAAGCCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTaGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GNKPFRGSRVFCCLS*SLTTFQYELPLKKK Trigger: CTTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGGCTTATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAACTGAATGGGTGGTTTTaGGGCATTATTGCTGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LFVLVTNYFPVRVAFEEELNGWF*GIIAGN Trigger: GTTTCCAGCAATAATGCCTCAAAACCACCCATTCAG...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGATCGAGGTTTCTGAATaGGTGGTTTTGAGGCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: VFCCLSLSLTTFQYELPLIEVSE*VVLRHY Trigger: ATAATGCCTCAAAACCACCCATTCAGAAACCTCGAT...CAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGTTGAGGCATTATTGCTaGAAACACTTGGCTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: FCCLSLSLTTFQYELPLKLRHYC*KHLAHL Trigger: AAGATGAGCCAAGTGTTTCCAGCAATAATGCCTCAA...CTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR CAA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTaGGCTCATCTTCTTTGGATAAGAATTAAGTACTTGGTTTCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EVSEWVVLRHYCWKH*AHLLWIRIKYLVSV Trigger: AACCGAAACCAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAAGTTTTGAGGCATTATTaGTGGAAACACTTGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LFVLVTNYFPVRVAFEEEVLRHY*WKHLAH Trigger: ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAAC...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTaGAAGAAGAAGATGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFQYELP*KKKMEL Trigger: CAACTCCATCTTCTTCTTCAAAGGCAACTCGTACTG...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTACATGTTCAGGGTAGAGGTGTGAACATCACAAACATCAAACCACTTCTCCGGGTGTTCTGCTGTTaGTCCTTGTCACTAACTACT | + |
|
Preference number: 3 (lower is better) Translates to: SLHVQGRGVNITNIKPLLRVFCC*SLSLTT Trigger: AGTAGTTAGTGACAAGGACAAACAGCAGAACACCCG...GAGAAGTGGTTTGATGTTTGTGATGTTCACACCTCTACCCTGAACATGTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGTTCCCTTAAAACTGTTCCTAAGTCCTAGTCTTGATTTTCTTCTTTACATGGGTTTTGAGGCATTATaGCTGGAAACACTTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVPLKLFLSPSLDFLLYMGFEAL*LETLGS Trigger: TGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACC...CATGTAAAGAAGAAAATCAAGACTAGGACTTAGGAACAGTTTTAAGGGAACGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGTGGACAGCCCAGGTaGCGGCCTCTCCCAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQPGVLLFVLVTNYFPVRGQPR*RPLPKP Trigger: GGGTTTTGGGAGAGGCCGGCACCTGGGCTGTCCACG...TACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATCAGGGCTGGTGGGGTTaGCAGGGCAGCCCGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHQGWWG*QGSPRG Trigger: CCCCCTCGGGCTGCCCTGCCAACCCCACCAGCCCTG...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCAGAGGTCAGCAGGGCTaGTGGGGTTGGCAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFRGQQG*WGWQGS Trigger: GCTGCCCTGCCAACCCCACCAGCCCTGCTGACCTCT...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | AATAAGCCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTTGGTGCCAGGGGCAGTaGGGTCCTCCCGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKPFRGSRVFCCLSLSLTWCQGQ*GPPGSP Trigger: TGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCA...AGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGGCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACTGGCTCAGGGGAGATaGCTCCAGGTCCGAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQPGVLLFVLVTNYFPVLAQGR*LQVRTV Trigger: GACCGTTCGGACCTGGAGCCATCTCCCCTGAGCCAG...TACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCAGGGCTGGTGGGGTTaGCAGGGCAGCCCGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKQGWWG*QGSPRG Trigger: CCCCCTCGGGCTGCCCTGCCAACCCCACCAGCCCTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATGGTCAGCAGGGCTGGTaGGGTTGGCAGGGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHGQQGW*GWQGSP Trigger: CGGGCTGCCCTGCCAACCCCACCAGCCCTGCTGACC...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTAAAGAGCCTCTCAGGCTaGGTGGGCTGGGGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRQPGVLLFVLVTNYFPVKSLSG*VGWGAT Trigger: AGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTT...TACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGTCAGCAGGGCTGGTaGGGTTGGCAGGGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGQQGW*GWQGSP Trigger: CGGGCTGCCCTGCCAACCCCACCAGCCCTGCTGACC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCTTATGTCCACCATGGTaGCAGGGGCAGTGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFLCPPW*QGQCGP Trigger: AGGACCGCACTGCCCCTGGCACCATGGTGGACATAA...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | AATAAGCCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTCAGGCGCCAGGCATGTaGAAACTCCTGTCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKPFRGSRVFCCLSLSLTQAPGM*KLLSTP Trigger: GGGAGTGGACAGGAGTTTGCACATGCCTGGCGCCTG...AGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGGCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCCGTCAAACACCCGTaGACAGCCCAGGTGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPVKHP*TAQVPA Trigger: GGCCGGCACCTGGGCTGTCCACGGGTGTTTGACGGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTGGTGCCAGGGGCAGTaGGGTCCTCCCGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKWCQGQ*GPPGSP Trigger: TGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCGTGGACAGCCCAGGTaGCGGCCTCTCCCAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRGQPR*RPLPKP Trigger: GGGTTTTGGGAGAGGCCGGCACCTGGGCTGTCCACG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATTCAGGCTGGGTGGGCTaGGGTGCAACTAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHSGWVG*GATSQQ Trigger: CTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGA...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGAGGTCAGCAGGGCTaGTGGGGTTGGCAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRGQQG*WGWQGS Trigger: GCTGCCCTGCCAACCCCACCAGCCCTGCTGACCTCT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | AATAAGCCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTCACAGGGACTCCTGCTaGCTCCTTTGGGCTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKPFRGSRVFCCLSLSLTHRDSC*LLWARY Trigger: ATACCTAGCCCAAAGGAGTCAGCAGGAGTCCCTGTG...AGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGGCTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCACTGGAGAGAGGAGTaGAGTGCTCGTCGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFHWREE*SARRHQ Trigger: TTGATGACGACGAGCACTTCACTCCTCTCTCCAGTG...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTCAGGCTGGGTGGGCTaGGGTGCAACTAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSGWVG*GATSQQ Trigger: CTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGAACGGTCCCGGCTGTaGAAGAGCCTCTCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKERSRL*KSLSGW Trigger: CCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTTC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTGGCTCAGGGGAGATaGCTCCAGGTCCGAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLAQGR*LQVRTV Trigger: GACCGTTCGGACCTGGAGCCATCTCCCCTGAGCCAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGCAATGGGCTTGGCCTaGCTCAGGGGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKAMGLA*LRGDGS Trigger: GGAGCCATCTCCCCTGAGCCAGGCCAAGCCCATTGC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGGGTCAGCAATGGGCTTaGCCTGGCTCAGGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFCCLSLSLTTFQYELPLGQQWA*PGSGEM Trigger: CATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACC...CAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCGGCAATCCGAGGACGTaGCCAATTTCATGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFGNPRT*PISWTA Trigger: AGCTGTCCATGAAATTGGCCACGTCCTCGGATTGCC...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCGTGTCCAGGGGGCTaGGGATGCCAGGGAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPCPGG*GCQGIL Trigger: AAGGATTCCCTGGCATCCCCAGCCCCCTGGACACGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTCTTGGAGAAGGCCCTaGTGGCCCCAGTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSWRRP*WPQCLR Trigger: CCTCAGACACTGGGGCCAGCAGGGCCTTCTCCAAGA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCAGGCGCCAGGCATGTaGAAACTCCTGTCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKQAPGM*KLLSTP Trigger: GGGAGTGGACAGGAGTTTGCACATGCCTGGCGCCTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCAGGGGGCTGGGGATaGCAGGGAATCCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPGGWG*QGILLR Trigger: TCTCAGAAGGATTCCCTGGCATCCCCAGCCCCCTGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAAGAGCCTCTCAGGCTaGGTGGGCTGGGGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKKSLSG*VGWGAT Trigger: AGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAAGCAATGGGCTTGGCCTaGCTCAGGGGAGATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFVLVTNYFPVRVAFEEEAMGLA*LRGDGS Trigger: GGAGCCATCTCCCCTGAGCCAGGCCAAGCCCATTGC...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGTCAGCAATGGGCTTaGCCTGGCTCAGGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGQQWA*PGSGEM Trigger: CATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTGGAGAAGGCCCTGCTaGCCCCAGTGTCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKWRRPC*PQCLRH Trigger: ATGCCTCAGACACTGGGGCCAGCAGGGCCTTCTCCA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGTGGAGAAGGCCCTGCTaGCCCCAGTGTCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCCLSLSLTTFQYELPLKWRRPC*PQCLRH Trigger: ATGCCTCAGACACTGGGGCCAGCAGGGCCTTCTCCA...CTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | ATCGAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTAGGTCAGTGTCTTCTTaGAGAAGGCCCTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IEVSEWVVLRHYCWKHLARSVSS*RRPCWP Trigger: GGGCCAGCAGGGCCTTCTCCAAGAAGACACTGACCT...AGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | AAACACTTGGCTCATCTTCTTTGGATAAGAATTAAGTACTTGGTTTCGGTTGACCCCGTCAAACACCCGTaGACAGCCCAGGTGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHLAHLLWIRIKYLVSVDPVKHP*TAQVPA Trigger: GGCCGGCACCTGGGCTGTCCACGGGTGTTTGACGGG...GTCAACCGAAACCAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR CAA 72 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTaGTCACTAACTACTTTCCAGTACGAGTTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PFRGSRVFCCLS*SLTTFQYELPL Trigger: CAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCAGCTTGAGCCAAGGTaGATCCCACAGGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKQLEPR*IPQGLL Trigger: CAGGAGTCCCTGTGGGATTCACCTTGGCTCAAGCTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGAGGCATCCTCCTGTTaGCCATCTGGCTTGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKEASSC*PSGLGN Trigger: GTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAATCTTGGAGAAGGCCCTaGTGGCCCCAGTGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVLVTNYFPVRVAFEEESWRRP*WPQCLR Trigger: CCTCAGACACTGGGGCCAGCAGGGCCTTCTCCAAGA...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTATGTCCACCATGGTaGCAGGGGCAGTGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLCPPW*QGQCGP Trigger: AGGACCGCACTGCCCCTGGCACCATGGTGGACATAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGGTCAGTGTCTTCTTaGAGAAGGCCCTGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRSVSS*RRPCWP Trigger: GGGCCAGCAGGGCCTTCTCCAAGAAGACACTGACCT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCACAGGGACTCCTGCTaGCTCCTTTGGGCTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKHRDSC*LLWARY Trigger: ATACCTAGCCCAAAGGAGTCAGCAGGAGTCCCTGTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTACATGTTCAGGGTAGAGGTGTGAACATCACAAACATCAAACCACTTCTCGAGGCATCCTCCTGTTaGCCATCTGGCTTGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLHVQGRGVNITNIKPLLEASSC*PSGLGN Trigger: GTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTC...GAGAAGTGGTTTGATGTTTGTGATGTTCACACCTCTACCCTGAACATGTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTCCCGGAAGTCCAGTaGTGTCACCTCACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLPEVQ*CHLTPH Trigger: ATGTGGAGTGAGGTGACACCACTGGACTTCCGGGAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCACTGGAGAGAGGAGTaGAGTGCTCGTCGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKHWREE*SARRHQ Trigger: TTGATGACGACGAGCACTTCACTCCTCTCTCCAGTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGCAGCCGGGTGTTCTaGTGTTTGTCCTTGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGSRVF*CLSLSL Trigger: TAGTGACAAGGACAAACAGCAGAACACCCGGCTGCC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAACTCCCGGAAGTCCAGTaGTGTCACCTCACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVLVTNYFPVRVAFEEELPEVQ*CHLTPH Trigger: ATGTGGAGTGAGGTGACACCACTGGACTTCCGGGAG...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGCAATCCGAGGACGTaGCCAATTTCATGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGNPRT*PISWTA Trigger: AGCTGTCCATGAAATTGGCCACGTCCTCGGATTGCC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| 3UTR CAA 72 bp | AATAAGCCATTCAGAGGCAGCCGGGTGTTCTGCTGTTaGTCCTTGTCACTAACTACTTTCCAGTACGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKPFRGSRVFCC*SLSLTTFQYEL Trigger: CAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGGCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR TCA 90 bp | AAACACTTGGCTCATCTTCTTTGGATAAGAATTAAGTACTTGGTTTCGGTTGACCAGCTTGAGCCAAGGTaGATCCCACAGGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHLAHLLWIRIKYLVSVDQLEPR*IPQGLL Trigger: CAGGAGTCCCTGTGGGATTCACCTTGGCTCAAGCTG...GTCAACCGAAACCAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTAAAGATGTACCTCTaGTCATCCCCAGAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLKMYL*SSPESW Trigger: CCAACTCTCTGGGGATGAGCAGAGGTACATCTTTAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATAATTGCTTTTCTGTCTaGCCAGTCCAACTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHNCFSV*PVQLKG Trigger: GCCTTTGAGTTGGACTGGGCAGACAGAAAAGCAATT...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTCGTCTTCTGTGTGTaGCTGGTCATTCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKFVFCV*LVILTV Trigger: GACAGTGAGAATGACCAGGCACACACAGAAGACGAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGTTGCCCATCTGGCTTaGGGAACAGCATTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKVAHLA*GTAFEE Trigger: TTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAAC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTGGGGAACAGCATTTaGAGAAAGCGCTTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLGNSI*RKRFCL Trigger: CAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTGAATGGGTGGTTTTaGGGCATTATTGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLNGWF*GIIAGN Trigger: GTTTCCAGCAATAATGCCTCAAAACCACCCATTCAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAATTGCTTTTCTGTCTaGCCAGTCCAACTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKNCFSV*PVQLKG Trigger: GCCTTTGAGTTGGACTGGGCAGACAGAAAAGCAATT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAAGATGGAGTTGTTGCCCATCTGGCTTaGGGAACAGCATTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTNYFPVRVAFEEEDGVVAHLA*GTAFEE Trigger: TTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAAC...AACTCCATCTTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGACGTGGCCAATTTCATaGACAGCTACTTTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKTWPIS*TATLRR Trigger: CCTTCTCAAAGTAGCTGTCCATGAAATTGGCCACGT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGTTTGGTTGCATTATaGATCCCACCCTGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSLVAL*IPPCRC Trigger: ACACCTACAGGGTGGGATCCATAATGCAACCAAACT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTGGGGAATGTAGTTTaGTTGCATTATGGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLGNVV*LHYGSH Trigger: GTGGGATCCATAATGCAACCAAACTACATTCCCCAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGTACGAGTTGCCTTTaGAGAAGAAGATGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSTSCL*RRRWSC Trigger: ACAACTCCATCTTCTTCTTCAAAGGCAACTCGTACT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTCAGGGTAGAGGTGTaGACATCACAAACATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKFRVEV*TSQTSN Trigger: GTTTGATGTTTGTGATGTTCACACCTCTACCCTGAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTACATGTTCAGGGTAGAGGTGTGAACATCACAAACATCAAACCACTTCTCAGTTTGGTTGCATTATaGATCCCACCCTGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHVQGRGVNITNIKPLLSLVAL*IPPCRC Trigger: ACACCTACAGGGTGGGATCCATAATGCAACCAAACT...GAGAAGTGGTTTGATGTTTGTGATGTTCACACCTCTACCCTGAACATGTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAAGATGGAGTTCTGGGGAATGTAGTTTaGTTGCATTATGGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVTNYFPVRVAFEEEDGVLGNVV*LHYGSH Trigger: GTGGGATCCATAATGCAACCAAACTACATTCCCCAG...AACTCCATCTTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGAACCATATAGTCTTTaGATTGCTTTTCTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKEPYSL*IAFLSA Trigger: GGCAGACAGAAAAGCAATTCAAAGACTATATGGTTC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGGAACCATATAGTCTTTaGATTGCTTTTCTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCCLSLSLTTFQYELPLKEPYSL*IAFLSA Trigger: GGCAGACAGAAAAGCAATTCAAAGACTATATGGTTC...CTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGTTTTGAGGCATTATTaGTGGAAACACTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKVLRHY*WKHLAH Trigger: ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAAC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTGAGGCATTATTGCTaGAAACACTTGGCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLRHYC*KHLAHL Trigger: AAGATGAGCCAAGTGTTTCCAGCAATAATGCCTCAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGATCGAGGTTTCTGAATaGGTGGTTTTGAGGCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKIEVSE*VVLRHY Trigger: ATAATGCCTCAAAACCACCCATTCAGAAACCTCGAT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGTACTTGGTTTCGGTTaGCATCAAATGCAAATACTA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKVLGFG*HQMQIL Trigger: TAGTATTTGCATTTGATGTCAACCGAAACCAAGTAC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CCA 90 bp | AAACACTTGGCTCATCTTCTTTGGATAAGAATTAAGTACTTGGTTTCGGTTGACACGTGGCCAATTTCATaGACAGCTACTTTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHLAHLLWIRIKYLVSVDTWPIS*TATLRR Trigger: CCTTCTCAAAGTAGCTGTCCATGAAATTGGCCACGT...GTCAACCGAAACCAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| 3UTR CAA 72 bp | GAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTaGGCTCATCTTCTTTGGATAAGAATTAAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EWVVLRHYCWKH*AHLLWIRIKYL Trigger: CAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR TCA 90 bp | CACGTTCCCTTAAAACTGTTCCTAAGTCCTAGTCTTGATTTTCTTCTTTACATGAAATGCAAATACCTTTaGAAAAGTAGCGCTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVPLKLFLSPSLDFLLYMKCKYL*KSSARL Trigger: AAGACGAGCGCTACTTTTTCAAAGGTATTTGCATTT...CATGTAAAGAAGAAAATCAAGACTAGGACTTAGGAACAGTTTTAAGGGAACGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | GCCTGGCTCAGGGGAGATGGCTCCAGGTCCGAACGGTCCCGGCTGTaGAAGAGCCTCTCAGGCTGGGTGGGCTGGGGTGCAACTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AWLRGDGSRSERSRL*KSLSGWVGWGATSQ Trigger: CTGGCTAGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTTCGGACCTGGAGCCATCTCCCCTGAGCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | CCAGGTCCGAACGGTCCCGGCTGTGGAAGAGCCTCTCAGGCTGGGTaGGCTGGGGTGCAACTAGCCAGCAGAGCGGCAGTGTCAGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPNGPGCGRASQAG*AGVQLASRAAVSDA Trigger: TGCGTCTGACACTGCCGCTCTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTTCGGACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | GGCTCCAGGTCCGAACGGTCCCGGCTGTGGAAGAGCCTCTCAGGCTaGGTGGGCTGGGGTGCAACTAGCCAGCAGAGCGGCAGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRSERSRLWKSLSG*VGWGATSQQSGSVR Trigger: TCTGACACTGCCGCTCTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTTCGGACCTGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | TCCGAACGGTCCCGGCTGTGGAAGAGCCTCTCAGGCTGGGTGGGCTaGGGTGCAACTAGCCAGCAGAGCGGCAGTGTCAGACGCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SERSRLWKSLSGWVG*GATSQQSGSVRRKT Trigger: TGTCTTGCGTCTGACACTGCCGCTCTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTTCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 90 bp | CCAGGTGCCGGCCTCTCCCAAAACCCAGCTTTATGTCCACCATGGTaGCAGGGGCAGTGCGGTCCTCCCGGAAGTCCAGTGGTGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAGLSQNPALCPPW*QGQCGPPGSPVVSP Trigger: AGGTGACACCACTGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCATGGTGGACATAAAGCTGGGTTTTGGGAGAGGCCGGCACCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | AGCATCATGGAGGTCAGCAATGGGCTTGGCCTGGCTCAGGGGAGATaGCTCCAGGTCCGAACGGTCCCGGCTGTGGAAGAGCCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIMEVSNGLGLAQGR*LQVRTVPAVEEPLR Trigger: CCTGAGAGGCTCTTCCACAGCCGGGACCGTTCGGACCTGGAGCCATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACCTCCATGATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | AGCCCAGGTGCCGGCCTCTCCCAAAACCCAGCTTTATGTCCACCATaGTGCCAGGGGCAGTGCGGTCCTCCCGGAAGTCCAGTGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPGAGLSQNPALCPP*CQGQCGPPGSPVVS Trigger: TGACACCACTGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCATGGTGGACATAAAGCTGGGTTTTGGGAGAGGCCGGCACCTGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | GCGCCAGGCATGTGCAAACTCCTGTCCACTCCCGTCAAACACCCGTaGACAGCCCAGGTGCCGGCCTCTCCCAAAACCCAGCTTTATGTC | + |
|
Preference number: 5 (lower is better) Translates to: APGMCKLLSTPVKHP*TAQVPASPKTQLYV Trigger: GACATAAAGCTGGGTTTTGGGAGAGGCCGGCACCTGGGCTGTCCACGGGTGTTTGACGGGAGTGGACAGGAGTTTGCACATGCCTGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 90 bp | GTGCTCGTCGTCATCAAAGTGGATCTCACCCAGGCGCCAGGCATGTaGAAACTCCTGTCCACTCCCGTCAAACACCCGTGGACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVVIKVDLTQAPGM*KLLSTPVKHPWTAQ Trigger: CTGGGCTGTCCACGGGTGTTTGACGGGAGTGGACAGGAGTTTGCACATGCCTGGCGCCTGGGTGAGATCCACTTTGATGACGACGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | GCCCATCTGGCTTGGGGAACAGCATTTGAAGAAAGCGCTTTTGTCTaGCCCTGGGCCGGAGACCTAAAGAGGTCAGCAGGGCTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHLAWGTAFEESAFV*PWAGDLKRSAGLVG Trigger: CCCCACCAGCCCTGCTGACCTCTTTAGGTCTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAGCCAGATGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 90 bp | CCAGGTCAGTGTCTTCTTGGAGAAGGCCCTGCTGGCCCCAGTGTCTaGGGCATCCTCCTGTTGCCCATCTGGCTTGGGGAACAGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQCLLGEGPAGPSV*GILLLPIWLGEQHL Trigger: CAAATGCTGTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTCAGACACTGGGGCCAGCAGGGCCTTCTCCAAGAAGACACTGACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | TGCTGGCCCCAGTGTCTGAGGCATCCTCCTGTTGCCCATCTGGCTTaGGGAACAGCATTTGAAGAAAGCGCTTTTGTCTGGCCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CWPQCLRHPPVAHLA*GTAFEESAFVWPWA Trigger: GGCCCAGGGCCAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTCAGACACTGGGGCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | GTCCACCATGGTGCCAGGGGCAGTGCGGTCCTCCCGGAAGTCCAGTaGTGTCACCTCACTCCACATCCTGAAGGCCAGTCTAAAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: VHHGARGSAVLPEVQ*CHLTPHPEGQSKDV Trigger: TACATCTTTAGACTGGCCTTCAGGATGTGGAGTGAGGTGACACCACTGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCATGGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | CCTGTGTCACTGGAGAGAGGAGTGAAGTGCTCGTCGTCATCAAAGTaGATCTCACCCAGGCGCCAGGCATGTGCAAACTCCTGTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PVSLERGVKCSSSSK*ISPRRQACANSCPL Trigger: GAGTGGACAGGAGTTTGCACATGCCTGGCGCCTGGGTGAGATCCACTTTGATGACGACGAGCACTTCACTCCTCTCTCCAGTGACACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 90 bp | TCTGAGGCATCCTCCTGTTGCCCATCTGGCTTGGGGAACAGCATTTaGAGAAAGCGCTTTTGTCTGGCCCTGGGCCGGAGACCTAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SEASSCCPSGLGNSI*RKRFCLALGRRPKE Trigger: CTCTTTAGGTCTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 90 bp | ACTTTGAGAAGGCTGATGCCTGTGTCACTGGAGAGAGGAGTGAAGTaGTCGTCGTCATCAAAGTGGATCTCACCCAGGCGCCAGGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: TLRRLMPVSLERGVK*SSSSKWISPRRQAC Trigger: ACATGCCTGGCGCCTGGGTGAGATCCACTTTGATGACGACGAGCACTTCACTCCTCTCTCCAGTGACACAGGCATCAGCCTTCTCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | CCAACTCAAAGGCAGGCTCCTGGGGAATGTAGTTTGGTTGCATTATaGATCCCACCCTGTAGGTGTGAGGCAATCCGAGGACGTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTQRQAPGECSLVAL*IPPCRCEAIRGRGQ Trigger: TTGGCCACGTCCTCGGATTGCCTCACACCTACAGGGTGGGATCCATAATGCAACCAAACTACATTCCCCAGGAGCCTGCCTTTGAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGGTCAGTGTCTTCTaGGAGAAGGCCCTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFQVSVF*EKALLA Trigger: GGCCAGCAGGGCCTTCTCCAAGAAGACACTGACCTG...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS TCA 90 bp | TTTGGGCTAGGTATCTCTGACCAGCCATATTTCAATAGGAAGCTCTaGGCATCATGGAGGTCAGCAATGGGCTTGGCCTGGCTCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGLGISDQPYFNRKL*ASWRSAMGLAWLRG Trigger: TCCCCTGAGCCAGGCCAAGCCCATTGCTGACCTCCATGATGCTCAGAGCTTCCTATTGAAATATGGCTGGTCAGAGATACCTAGCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCAGCCAGTGAGGATTaGGAGGGGGTCCCCGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPASED*EGVPVA Trigger: CGCTACGGGGACCCCCTCCAAATCCTCACTGGCTGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS TCA 90 bp | GGTTTTCGTAGAGCCAGTACCAGCTGTTGCGGAAGAAGTACGTGTTaGATCTCACCCTCACCTCACCATATTGGTTCCTCTCCTTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFRRASTSCCGRSTC*ISPSPHHIGSSPCG Trigger: TCCGCAAGGAGAGGAACCAATATGGTGAGGTGAGGGTGAGATTCAACACGTACTTCTTCCGCAACAGCTGGTACTGGCTCTACGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCAGAGGCAGCCGGGTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCCTCACCTCACCATATaGGTTCCTCTCCTTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PFRGSRVFCCLSLSLTTFPHLTI*VPLLAD Trigger: ATCCGCAAGGAGAGGAACCAATATGGTGAGGTGAGG...GAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTCTGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGAAGAAGAACCAGCCAGTGAGGATTaGGAGGGGGTCCCCGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LFVLVTNYFPVRVAFEEEPASED*EGVPVA Trigger: CGCTACGGGGACCCCCTCCAAATCCTCACTGGCTGG...TTCTTCTTCAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGGTCAGCAATGGGCTaGGCCTGGCTCAGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRSAMG*AWLRGD Trigger: ATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACCT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTTTGAAGAAAGCGCTTTaGTCTGGCCCTGGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IEVSEWVVLRHYCWKHLALKKAL*SGPGPE Trigger: CTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAA...AGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCAGGTCAGTGTCTTCTaGGAGAAGGCCCTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKQVSVF*EKALLA Trigger: GGCCAGCAGGGCCTTCTCCAAGAAGACACTGACCTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTTGAAGAAAGCGCTTTaGTCTGGCCCTGGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLKKAL*SGPGPE Trigger: CTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTCATCCCCAGAGAGTaGGCTGCTGTAGGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLIPRE*AAVGIS Trigger: GGAGATGCCTACAGCAGCCAACTCTCTGGGGATGAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATCTTCTTCTCATCCCCAGAGAGTaGGCTGCTGTAGGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEWVVLRHYCWKHLAHLLLIPRE*AAVGIS Trigger: GGAGATGCCTACAGCAGCCAACTCTCTGGGGATGAG...AAGAAGATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATAGCCAGTACCAGCTGTaGCGGAAGAAGTACGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHSQYQL*RKKYVL Trigger: CAACACGTACTTCTTCCGCAACAGCTGGTACTGGCT...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS CCA 90 bp | TTGCGGAAGAAGTACGTGTTGAATCTCACCCTCACCTCACCATATTaGTTCCTCTCCTTGCGGATCCAGTCAAACACTGTATCAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRKKYVLNLTLTSPY*FLSLRIQSNTVSND Trigger: GTCATTTGATACAGTGTTTGACTGGATCCGCAAGGAGAGGAACCAATATGGTGAGGTGAGGGTGAGATTCAACACGTACTTCTTCCGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTTGGCTCATCTTCTTTGGATAAGAATTAAGTACTTGGTTTCGGTTGACAGGTCAGCAATGGGCTaGGCCTGGCTCAGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KHLAHLLWIRIKYLVSVDRSAMG*AWLRGD Trigger: ATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACCT...GTCAACCGAAACCAAGTACTTAATTCTTATCCAAAGAAGATGAGCCAAGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCTCACCTCACCATATaGGTTCCTCTCCTTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPHLTI*VPLLAD Trigger: ATCCGCAAGGAGAGGAACCAATATGGTGAGGTGAGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGCCAGTACCAGCTGTaGCGGAAGAAGTACGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSQYQL*RKKYVL Trigger: CAACACGTACTTCTTCCGCAACAGCTGGTACTGGCT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGGGTAGCTCCTTCCTaGTTCGTCTTCTGTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRVAPS*FVFCVC Trigger: GCACACACAGAAGACGAACAAGGAAGGAGCTACCCT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS TCA 90 bp | TCAAACACTGTATCAAATGACCCCTTGCACGAACCATATAGTCTTTaGATTGCTTTTCTGTCTGCCCAGTCCAACTCAAAGGCAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNTVSNDPLHEPYSL*IAFLSAQSNSKAGS Trigger: GGAGCCTGCCTTTGAGTTGGACTGGGCAGACAGAAAAGCAATTCAAAGACTATATGGTTCGTGCAAGGGGTCATTTGATACAGTGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGTCATGGACAGCTACTTaGAGAAGGCTGATGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSWTAT*RRLMPV Trigger: CACAGGCATCAGCCTTCTCAAAGTAGCTGTCCATGA...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATGGGAATGTAGTTTGGTaGCATTATGGATCCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHGNVVW*HYGSHP Trigger: AGGGTGGGATCCATAATGCAACCAAACTACATTCCC...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGCTGTTTGTCCTTGTCACTAACTACTTTCCAGTACGAGTTGCCTTTGCCTGGGGAATGTAGTTaGGTTGCATTATGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFCCLSLSLTTFQYELPLPGECS*VALWIP Trigger: TGGGATCCATAATGCAACCAAACTACATTCCCCAGG...CAAAGGCAACTCGTACTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGGAATGTAGTTTGGTaGCATTATGGATCCCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGNVVW*HYGSHP Trigger: AGGGTGGGATCCATAATGCAACCAAACTACATTCCC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCCTGGGGAATGTAGTTaGGTTGCATTATGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKPGECS*VALWIP Trigger: TGGGATCCATAATGCAACCAAACTACATTCCCCAGG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCGGGTGTTCTGCTGTTaGTCCTTGTCACTAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKRVFCC*SLSLTT Trigger: AGTAGTTAGTGACAAGGACAAACAGCAGAACACCCG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCTTGGGGAACAGCATTaGAAGAAAGCGCTTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKLGEQH*KKALLS Trigger: AGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGGTTTTGAGGCATTATaGCTGGAAACACTTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKGFEAL*LETLGS Trigger: TGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCAGTACGAGTTGCCTTaGAAGAAGAAGATGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKQYELP*KKKMEL Trigger: CAACTCCATCTTCTTCTTCAAAGGCAACTCGTACTG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | CACGTTCCCTTAAAACTGTTCCTAAGTCCTAGTCTTGATTTTCTTCTTTACATGTCATGGACAGCTACTTaGAGAAGGCTGATGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HVPLKLFLSPSLDFLLYMSWTAT*RRLMPV Trigger: CACAGGCATCAGCCTTCTCAAAGTAGCTGTCCATGA...CATGTAAAGAAGAAAATCAAGACTAGGACTTAGGAACAGTTTTAAGGGAACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTTTCTGAATGGGTGGTTTTGAGGCATTATTGCTGGAAACACTTGGCTCATCATATAGTCTTTGAATaGCTTTTCTGTCTGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EVSEWVVLRHYCWKHLAHHIVFE*LFCLPS Trigger: ACTGGGCAGACAGAAAAGCAATTCAAAGACTATATG...ATGAGCCAAGTGTTTCCAGCAATAATGCCTCAAAACCACCCATTCAGAAACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122136.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGCATATAGTCTTTGAATaGCTTTTCTGTCTGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKHIVFE*LFCLPS Trigger: ACTGGGCAGACAGAAAAGCAATTCAAAGACTATATG...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGGTCATATCTCCAGTATaGGCTTCCTTTGAAAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKVISPV*ASFEKV Trigger: TACTTTTTCAAAGGAAGCCAATACTGGAGATATGAC...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTGTTTTCTTTGCAGAGAAGGCTGACACGTTCCCTTAAAACTGTTCCTAAGAGTACTTGGTTTCGGTaGACATCAAATGCAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLQRRLTRSLKTVPKSTWFR*TSNANT Trigger: AGTATTTGCATTTGATGTCAACCGAAACCAAGTACT...CTTAGGAACAGTTTTAAGGGAACGTGTCAGCCTTCTCTGCAAAGAAAACAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS CCA 72 bp | AACGGTCCCGGCTGTGGAAGAGCCTCTCAGGCTGGGTaGGCTGGGGTGCAACTAGCCAGCAGAGCGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NGPGCGRASQAG*AGVQLASRAAV Trigger: CACTGCCGCTCTGCTGGCTAGTTGCACCCCAGCCCACCCAGCCTGAGAGGCTCTTCCACAGCCGGGACCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | GAGGTCAGCAATGGGCTTGGCCTGGCTCAGGGGAGATaGCTCCAGGTCCGAACGGTCCCGGCTGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVSNGLGLAQGR*LQVRTVPAVEE Trigger: CTCTTCCACAGCCGGGACCGTTCGGACCTGGAGCCATCTCCCCTGAGCCAGGCCAAGCCCATTGCTGACCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | GGTGCCAGGGGCAGTGCGGTCCTCCCGGAAGTCCAGTaGTGTCACCTCACTCCACATCCTGAAGGCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GARGSAVLPEVQ*CHLTPHPEGQS Trigger: AGACTGGCCTTCAGGATGTGGAGTGAGGTGACACCACTGGACTTCCGGGAGGACCGCACTGCCCCTGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | GCCGGCCTCTCCCAAAACCCAGCTTTATGTCCACCATaGTGCCAGGGGCAGTGCGGTCCTCCCGGAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGLSQNPALCPP*CQGQCGPPGSP Trigger: TGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCATGGTGGACATAAAGCTGGGTTTTGGGAGAGGCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 72 bp | GGCCTCTCCCAAAACCCAGCTTTATGTCCACCATGGTaGCAGGGGCAGTGCGGTCCTCCCGGAAGTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLSQNPALCPPW*QGQCGPPGSPV Trigger: CACTGGACTTCCGGGAGGACCGCACTGCCCCTGGCACCATGGTGGACATAAAGCTGGGTTTTGGGAGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | ATGTGCAAACTCCTGTCCACTCCCGTCAAACACCCGTaGACAGCCCAGGTGCCGGCCTCTCCCAAAACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MCKLLSTPVKHP*TAQVPASPKTQ Trigger: CTGGGTTTTGGGAGAGGCCGGCACCTGGGCTGTCCACGGGTGTTTGACGGGAGTGGACAGGAGTTTGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 72 bp | GGGGGCAGCCGTGTGTCAGGAACCCCACAGCGTGGCTaGTTCATAGCGGCCAGTGTAGGTGAGTCCAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGSRVSGTPQRG*FIAASVGESNS Trigger: GGAATTGGACTCACCTACACTGGCCGCTATGAACAAGCCACGCTGTGGGGTTCCTGACACACGGCTGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | TGTCTTCTTGGAGAAGGCCCTGCTGGCCCCAGTGTCTaGGGCATCCTCCTGTTGCCCATCTGGCTTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLLGEGPAGPSV*GILLLPIWLGE Trigger: TTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTCAGACACTGGGGCCAGCAGGGCCTTCTCCAAGAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 72 bp | GTCATCAAAGTGGATCTCACCCAGGCGCCAGGCATGTaGAAACTCCTGTCCACTCCCGTCAAACACCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VIKVDLTQAPGM*KLLSTPVKHPW Trigger: CCACGGGTGTTTGACGGGAGTGGACAGGAGTTTGCACATGCCTGGCGCCTGGGTGAGATCCACTTTGATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | TCCTCCTGTTGCCCATCTGGCTTGGGGAACAGCATTTaGAGAAAGCGCTTTTGTCTGGCCCTGGGCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSCCPSGLGNSI*RKRFCLALGRR Trigger: TCTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAACAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | CGTGTCCAGGGGGCTGGGGATGCCAGGGAATCCTTCTaGGATCAGTTTAGGGTAGCTCCTTCCTTGTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVQGAGDARESF*DQFRVAPSLFV Trigger: GACGAACAAGGAAGGAGCTACCCTAAACTGATCTCAGAAGGATTCCCTGGCATCCCCAGCCCCCTGGACACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS GCA 72 bp | AGGCTGATGCCTGTGTCACTGGAGAGAGGAGTGAAGTaGTCGTCGTCATCAAAGTGGATCTCACCCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RLMPVSLERGVK*SSSSKWISPRR Trigger: GCGCCTGGGTGAGATCCACTTTGATGACGACGAGCACTTCACTCCTCTCTCCAGTGACACAGGCATCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | GGAACAGCATTTGAAGAAAGCGCTTTTGTCTGGCCCTaGGCCGGAGACCTAAAGAGGTCAGCAGGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTAFEESAFVWP*AGDLKRSAGLV Trigger: CACCAGCCCTGCTGACCTCTTTAGGTCTCCGGCCCAGGGCCAGACAAAAGCGCTTTCTTCAAATGCTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | CTGGAGAGAGGAGTGAAGTGCTCGTCGTCATCAAAGTaGATCTCACCCAGGCGCCAGGCATGTGCAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LERGVKCSSSSK*ISPRRQACANS Trigger: GGAGTTTGCACATGCCTGGCGCCTGGGTGAGATCCACTTTGATGACGACGAGCACTTCACTCCTCTCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | TCGCCTTCTGGAATCTACGTACAGCTTGAGCCAAGGTaGATCCCACAGGGACTCCTGCTGACTCCTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSGIYVQLEPR*IPQGLLLTPLG Trigger: GCCCAAAGGAGTCAGCAGGAGTCCCTGTGGGATTCACCTTGGCTCAAGCTGTACGTAGATTCCAGAAGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 72 bp | CAGTCTAAAGATGTACCTCTGCTCATCCCCAGAGAGTaGGCTGCTGTAGGCATCTCCCACCAGCCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QSKDVPLLIPRE*AAVGISHQPPG Trigger: ACCTGGAGGCTGGTGGGAGATGCCTACAGCAGCCAACTCTCTGGGGATGAGCAGAGGTACATCTTTAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | AGGCAGGCTCCTGGGGAATGTAGTTTGGTTGCATTATaGATCCCACCCTGTAGGTGTGAGGCAATCCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RQAPGECSLVAL*IPPCRCEAIRG Trigger: TCCTCGGATTGCCTCACACCTACAGGGTGGGATCCATAATGCAACCAAACTACATTCCCCAGGAGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 90 bp | TGTCTGCCCAGTCCAACTCAAAGGCAGGCTCCTGGGGAATGTAGTTaGGTTGCATTATGGATCCCACCCTGTAGGTGTGAGGCAATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: CLPSPTQRQAPGECS*VALWIPPCRCEAIR Trigger: TCGGATTGCCTCACACCTACAGGGTGGGATCCATAATGCAACCAAACTACATTCCCCAGGAGCCTGCCTTTGAGTTGGACTGGGCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | CAGTGTCTGAGGCATCCTCCTGTTGCCCATCTGGCTTaGGGAACAGCATTTGAAGAAAGCGCTTTTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QCLRHPPVAHLA*GTAFEESAFVW Trigger: CCAGACAAAAGCGCTTTCTTCAAATGCTGTTCCCCAAGCCAGATGGGCAACAGGAGGATGCCTCAGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | GGTATCTCTGACCAGCCATATTTCAATAGGAAGCTCTaGGCATCATGGAGGTCAGCAATGGGCTTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GISDQPYFNRKL*ASWRSAMGLAW Trigger: CCAGGCCAAGCCCATTGCTGACCTCCATGATGCTCAGAGCTTCCTATTGAAATATGGCTGGTCAGAGATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 72 bp | CAACTCAAAGGCAGGCTCCTGGGGAATGTAGTTTGGTaGCATTATGGATCCCACCCTGTAGGTGTGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QLKGRLLGNVVW*HYGSHPVGVRQ Trigger: TTGCCTCACACCTACAGGGTGGGATCCATAATGCAACCAAACTACATTCCCCAGGAGCCTGCCTTTGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 72 bp | AGTCCAACTCAAAGGCAGGCTCCTGGGGAATGTAGTTaGGTTGCATTATGGATCCCACCCTGTAGGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPTQRQAPGECS*VALWIPPCRCE Trigger: CTCACACCTACAGGGTGGGATCCATAATGCAACCAAACTACATTCCCCAGGAGCCTGCCTTTGAGTTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CAA 90 bp | ACACTGTATCAAATGACCCCTTGCACGAACCATATAGTCTTTGAATaGCTTTTCTGTCTGCCCAGTCCAACTCAAAGGCAGGCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLYQMTPCTNHIVFE*LFCLPSPTQRQAPG Trigger: CCCAGGAGCCTGCCTTTGAGTTGGACTGGGCAGACAGAAAAGCAATTCAAAGACTATATGGTTCGTGCAAGGGGTCATTTGATACAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS CCA 72 bp | AAGTACGTGTTGAATCTCACCCTCACCTCACCATATTaGTTCCTCTCCTTGCGGATCCAGTCAAACACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KYVLNLTLTSPY*FLSLRIQSNTV Trigger: TACAGTGTTTGACTGGATCCGCAAGGAGAGGAACCAATATGGTGAGGTGAGGGTGAGATTCAACACGTACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS GCA 72 bp | TTTAGGGTAGCTCCTTCCTTGTTCGTCTTCTGTGTGTaGCTGGTCATTCTCACTGTCATATCTCCAGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: FRVAPSLFVFCV*LVILTVISPVL Trigger: CAATACTGGAGATATGACAGTGAGAATGACCAGGCACACACAGAAGACGAACAAGGAAGGAGCTACCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033278.8 |
||
| CDS CAA 72 bp | CAAATGACCCCTTGCACGAACCATATAGTCTTTGAATaGCTTTTCTGTCTGCCCAGTCCAACTCAAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QMTPCTNHIVFE*LFCLPSPTQRQ Trigger: CTGCCTTTGAGTTGGACTGGGCAGACAGAAAAGCAATTCAAAGACTATATGGTTCGTGCAAGGGGTCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||
| CDS TCA 72 bp | GTATCAAATGACCCCTTGCACGAACCATATAGTCTTTaGATTGCTTTTCTGTCTGCCCAGTCCAACTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSNDPLHEPYSL*IAFLSAQSNSK Trigger: CTTTGAGTTGGACTGGGCAGACAGAAAAGCAATTCAAAGACTATATGGTTCGTGCAAGGGGTCATTTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033278.8 ENSMUST00000122136.2 |
||