Pregenerated sensors for MMP20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018620Ensembl transcript IDs: ENSMUST00000034487.4
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTATTATTTTCAAGGAACCTTCAATCACCCTCACGACTGAAGGTTaGAGAGGAGTGTCTCTGACACACGACTTGGTGCGTAATGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: IIIFKEPSITLTTEG*RGVSLTHDLVRNVQ Trigger: CTGGACATTACGCACCAAGTCGTGTGTCAGAGACACTCCTCTCCAACCTTCAGTCGTGAGGGTGATTGAAGGTTCCTTGAAAATAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR TCA 90 bp | CCAGATATTGTCTTCAACAGTCAACATCCGGTTGGGTATGCACAGTaGCTTTCACTAAGAGAAGCCAAATGGAACACTTGCAGTAACAGA | + |
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Preference number: 1 (lower is better) Translates to: PDIVFNSQHPVGYAQ*LSLREAKWNTCSNR Trigger: TCTGTTACTGCAAGTGTTCCATTTGGCTTCTCTTAGTGAAAGTCACTGTGCATACCCAACCGGATGTTGACTGTTGAAGACAATATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CCA 90 bp | GACAGCAAAGATACCAGATATTGTCTTCAACAGTCAACATCCGGTTaGGTATGCACAGTGACTTTCACTAAGAGAAGCCAAATGGAACAC | + |
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Preference number: 1 (lower is better) Translates to: DSKDTRYCLQQSTSG*VCTVTFTKRSQMEH Trigger: GTGTTCCATTTGGCTTCTCTTAGTGAAAGTCACTGTGCATACCCAACCGGATGTTGACTGTTGAAGACAATATCTGGTATCTTTGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR GCA 90 bp | AAAGATACCAGATATTGTCTTCAACAGTCAACATCCGGTTGGGTATaGACAGTGACTTTCACTAAGAGAAGCCAAATGGAACACTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: KDTRYCLQQSTSGWV*TVTFTKRSQMEHLQ Trigger: CTGCAAGTGTTCCATTTGGCTTCTCTTAGTGAAAGTCACTGTGCATACCCAACCGGATGTTGACTGTTGAAGACAATATCTGGTATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAGAGGAGTGTCTCTaGCACACGACTTGGTGCGTA | + |
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Preference number: 2 (lower is better) Translates to: CTHMCRRPRKPPERIRLPGEECL*HTTWCV Trigger: TACGCACCAAGTCGTGTGTCAGAGACACTCCTCTCC...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTAATCACCCTCACGACTaGAGGTTGGAGAGGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: CTHMCRRPRKPPERIRLPNHPHD*RLERSV Trigger: GACACTCCTCTCCAACCTTCAGTCGTGAGGGTGATT...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR GCA 90 bp | CGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGTCCAGTCATCAGTTaGTCACAGCTCTCTTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: RPRKPPERIRLPGTRVNRCPVIS*SQLSSS Trigger: GGACGAAGAGAGCTGTGAGCAACTGATGACTGGACA...TCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGTATGCGCACACACATaGGTGCACATAGTCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: CTHMCRRPRKPPERIRLPVCAHT*VHIVLF Trigger: AAAAAGGACTATGTGCACTCATGTGTGTGCGCATAC...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CAA 90 bp | GGTTGTAAGTTGTCCATGTGGGTGCTGGAGACTGAACTCAGGTCCTaGGAAGAGCAGCAAGCATTCTTAGCCTCTGACCATCTATCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GCKLSMWVLETELRS*EEQQAFLASDHLSL Trigger: GAGAGATAGATGGTCAGAGGCTAAGAATGCTTGCTGCTCTTCCAAGGACCTGAGTTCAGTCTCCAGCACCCACATGGACAACTTACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR GCA 90 bp | GTATGCATGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGGATCTCCACTGCAGGTaGTACCAGGAAGTAGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: VCMSICTHMCRRPRKPPEDLHCR*YQEVGN Trigger: ATTTCCTACTTCCTGGTAGCACCTGCAGTGGAGATC...CTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACATGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | GTATGCATGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGCTATTTAGAAGAAACTaGGGTGGATCAAAGATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VCMSICTHMCRRPRKPPELFRRN*GGSKIS Trigger: GGAGATCTTTGATCCACCTCAGTTTCTTCTAAATAG...CTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACATGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTGCAATAAAAGTGAAATaGCTTTCCTTCTCAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QGSHQRGSDCLEPELTDGAIKVK*LSFSTG Trigger: CCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGC...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CCA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACTGTCCATGTGGGTGCTaGAGACTGAACTCAGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LPHLFIHASRDGHLSTFDCPCGC*RLNSGP Trigger: AGGACCTGAGTTCAGTCTCCAGCACCCACATGGACA...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR GCA 90 bp | GTAAGACATTTCCAGCCTGCAATAAAAGTGAAATGGCTTTCCTTCTCAACAGGGATCAAAGATCTCCACTaGAGGTGCTACCAGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: VRHFQPAIKVKWLSFSTGIKDLH*RCYQEV Trigger: TACTTCCTGGTAGCACCTGCAGTGGAGATCTTTGAT...CCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGCAGGCTGGAAATGTCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | ATGCATCACGTGATGGACATCTTTCCACATTTGACTATTGTGAATAATGCTGCCAGCATTCTTAGCCTCTaGCCATCTATCTCTCTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: MHHVMDIFPHLTIVNNAASILSL*PSISLV Trigger: GACTAGAGAGATAGATGGTCAGAGGCTAAGAATGCT...GGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CCA 90 bp | AAATGGCTTTCCTTCTCAACAGGGCACCTTGAGCTTAGACAGCAAAGATACCAGTCTTTCTGTATTAACTaGGTAGAGTTGGGAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KWLSFSTGHLELRQQRYQSFCIN*VELGRK Trigger: TTTTCTTCCCAACTCTACCCAGTTAATACAGAAAGA...CTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCCTGTTGAGAAGGAAAGCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CAA 90 bp | CACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTaGACTATTGTGAATAATGCTGCCGTGAACACTGGTGTGCAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: HIYSYMHHVMDIFPH*TIVNNAAVNTGVQV Trigger: AACTTGCACACCAGTGTTCACGGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR TCA 90 bp | ATGCATCACGTGATGGACATCTTTCCACATTTGACTATTGTGAATAATGCTGCCAACAGAAAAGAGAAATaGGGAACTCCTCTAACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: MHHVMDIFPHLTIVNNAANRKEK*GTPLTQ Trigger: TTGGGTTAGAGGAGTTCCTCATTTCTCTTTTCTGTT...GGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR GCA 72 bp | GCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTaGCTGGAACCAGAGTTAACAGATGGTTGTAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGAQGSHQRGSD*LEPELTDGCKL Trigger: CAACTTACAACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CAA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTCAAAGATACCAGATATaGTCTTCAACAGTCAACATC | + |
|
Preference number: 3 (lower is better) Translates to: CTHMCRRPRKPPERIRLPQRYQI*SSTVNI Trigger: GATGTTGACTGTTGAAGACAATATCTGGTATCTTTG...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR TCA 72 bp | GTCTTCAACAGTCAACATCCGGTTGGGTATGCACAGTaGCTTTCACTAAGAGAAGCCAAATGGAACACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VFNSQHPVGYAQ*LSLREAKWNTC Trigger: GCAAGTGTTCCATTTGGCTTCTCTTAGTGAAAGTCACTGTGCATACCCAACCGGATGTTGACTGTTGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCCACATTTGACTATTGTGAATAATGCTGCCGTGAACACTGGTGTGCAAATGTCCAGTCATCAGTaGCTCACAGCTCTCTTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: IFPHLTIVNNAAVNTGVQMSSHQ*LTALFV Trigger: GACGAAGAGAGCTGTGAGCAACTGATGACTGGACAT...TTGCACACCAGTGTTCACGGCAGCATTATTCACAATAGTCAAATGTGGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCCACATTTGACTATTGTGAATAATGCTGCCGTGAACACTGGTGTGCAAACTGAACTCAGGTCCTaGGAAGAGCAGCAAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: IFPHLTIVNNAAVNTGVQTELRS*EEQQAF Trigger: GAATGCTTGCTGCTCTTCCAAGGACCTGAGTTCAGT...TTGCACACCAGTGTTCACGGCAGCATTATTCACAATAGTCAAATGTGGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR GCA 72 bp | AGATATTGTCTTCAACAGTCAACATCCGGTTGGGTATaGACAGTGACTTTCACTAAGAGAAGCCAAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RYCLQQSTSGWV*TVTFTKRSQME Trigger: TTCCATTTGGCTTCTCTTAGTGAAAGTCACTGTGCATACCCAACCGGATGTTGACTGTTGAAGACAATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR-3UTR CAA 90 bp | AGACATTTCCAGCCTGCAATAAAAGTGAAATGGCTTTCCTTCTCAACAGGGCACATTAACTGGGTAGAGTaGGGAAGAAAAGGTTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: RHFQPAIKVKWLSFSTGHINWVE*GRKGLV Trigger: AACTAAACCTTTTCTTCCCAACTCTACCCAGTTAAT...GTGCCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGCAGGCTGGAAATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR TCA 72 bp | AGAGCCAAGAACACACCTGGTGGTACATTTCGTTTGTaGTACCTTCAAAGCACAAATAAGTACATTTATGTC | + |
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Preference number: 3 (lower is better) Translates to: RAKNTPGGTFRL*YLQSTNKYIYV Trigger: GACATAAATGTACTTATTTGTGCTTTGAAGGTATCACAAACGAAATGTACCACCAGGTGTGTTCTTGGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR TCA 90 bp | CGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGGTACATCAGTGCTaGTGGATCTGTGGAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPRKPPERIRLPGTRVNRWVHQC*WICGMA Trigger: GGCCATTCCACAGATCCATCAGCACTGATGTACCCA...TCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR TCA 90 bp | AAATGGCTTTCCTTCTCAACAGGGCACCTTGAGCTTAGACAGCAAAGATACCAGGGGGAAAGGAGCTGGTaGTGGTGCTGGGCCGAATCC | + |
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Preference number: 4 (lower is better) Translates to: KWLSFSTGHLELRQQRYQGERSW*WCWAES Trigger: GGATTCGGCCCAGCACCATCACCAGCTCCTTTCCCC...CTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCCTGTTGAGAAGGAAAGCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR GCA 90 bp | TGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCATTCTCCAGGAGCAAATaGATGGGCCAGAGTCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: CQYAHICAGAQGSHQRGSFSRSK*MGQSPS Trigger: CGAGGGACTCTGGCCCATGCATTTGCTCCTGGAGAA...TGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | GTATGCATGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGACCATCTCGCCAGCCTaGGGGCCTCCTTTCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VCMSICTHMCRRPRKPPETISPA*GPPFFV Trigger: TACAAAGAAAGGAGGCCCCCAGGCTGGCGAGATGGT...CTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACATGCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTGATGGATCTGTGGAATaGCCCAGGCCCAGAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGDGSVE*PRPRAW Trigger: CCATGCTCTGGGCCTGGGCCATTCCACAGATCCATC...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | TGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAAGATGGCTTGTGAGGTaGGATATGGGGCATGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CQYAHICAGAQGSHQRGSRWLVR*DMGHGG Trigger: CCCACCATGCCCCATATCCCACCTCACAAGCCATCT...TGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTGCTGTACTCCACGCATaGAGGGCCATCTGTATTGCC | + |
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Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGAVLHA*RAICIA Trigger: GGCAATACAGATGGCCCTGCATGCGTGGAGTACAGC...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTCCTTGTCCACCTCAGTaGGACTCATGGAGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGPCPPQ*DSWRVC Trigger: ACACACCCTCCATGAGTCCCACTGAGGTGGACAAGG...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTCCATTTGGGTTCACCTaGGAAGAGGCGGTAGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGPFGFT*EEAVVS Trigger: GCTAACTACCGCCTCTTCCCAGGTGAACCCAAATGG...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | AGACATTTCCAGCCTGCAATAAAAGTGAAATGGCTTTCCTTCTCAACAGGGCACCCAGGAGCAAATGCATaGGCCAGAGTCCCTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RHFQPAIKVKWLSFSTGHPGANA*ARVPRG Trigger: GCCTCGAGGGACTCTGGCCCATGCATTTGCTCCTGG...GTGCCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGCAGGCTGGAAATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTGTCAAGATAGGCCTGTaGAAGGTGGTAGTTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGVKIGL*KVVVAP Trigger: AGGAGCAACTACCACCTTGCACAGGCCTATCTTGAC...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CAA 72 bp | GATTGCCTGGAACCAGAGTTAACAGATGGTTGTAAGTaGTCCATGTGGGTGCTGGAGACTGAACTCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: DCLEPELTDGCK*SMWVLETELRS Trigger: GGACCTGAGTTCAGTCTCCAGCACCCACATGGACAACTTACAACCATCTGTTAACTCTGGTTCCAGGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGAGTCATAAATTGTCCGTaGAGGACCTTGCATATGGAA | + |
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Preference number: 4 (lower is better) Translates to: RPRKPPERIRLPGTRVNRVINCP*RTLHME Trigger: TTCCATATGCAAGGTCCTCCACGGACAATTTATGAC...TCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGCCACCAGAGAGGATCAGATTGCCTGGAACCAGAGTTAACAGATGGTGGTCCGTATAATGCTTaGATCCCTTTCACATCATCC | + |
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Preference number: 4 (lower is better) Translates to: QGSHQRGSDCLEPELTDGGPYNA*IPFTSS Trigger: GGATGATGTGAAAGGGATCCAAGCATTATACGGACC...ACCATCTGTTAACTCTGGTTCCAGGCAATCTGATCCTCTCTGGTGGCTTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | AAAGTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGCATCAAAGGACGAGCTaGAGTCACAGAGGTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KVLPVVECLAVVSMKINLHQRTS*SHRGRG Trigger: TCCCCGACCTCTGTGACTCCAGCTCGTCCTTTGATG...CAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CAA 72 bp | GGGCACCTTGAGCTTAGACAGCAAAGATACCAGATATaGTCTTCAACAGTCAACATCCGGTTGGGTATGCAC | + |
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Preference number: 4 (lower is better) Translates to: GHLELRQQRYQI*SSTVNIRLGMH Trigger: GTGCATACCCAACCGGATGTTGACTGTTGAAGACAATATCTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR TCA 90 bp | AAATGGCTTTCCTTCTCAACAGGGCACCTTGAGCTTAGACAGCAAAGATACCAGAGTAGTGAGGACCTTTaGAGAAGAAAGCAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KWLSFSTGHLELRQQRYQSSEDL*RRKQCL Trigger: GAGGCATTGCTTTCTTCTTCAAAGGTCCTCACTACT...CTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCCTGTTGAGAAGGAAAGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR TCA 90 bp | AAATGGCTTTCCTTCTCAACAGGGCACCTTGAGCTTAGACAGCAAAGATACCAGCACAGCGAGGCTTCTTaGTCACATTCATTGTATTCT | + |
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Preference number: 4 (lower is better) Translates to: KWLSFSTGHLELRQQRYQHSEAS*SHSLYS Trigger: AGAATACAATGAATGTGATCAAGAAGCCTCGCTGTG...CTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCCTGTTGAGAAGGAAAGCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS-3UTR CCA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACGGAGGACCTTGCATATaGAATCCTCGAGTGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPHLFIHASRDGHLSTFDGGPCI*NPRVTQ Trigger: CTGGGTCACTCGAGGATTCCATATGCAAGGTCCTCC...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| 3UTR CAA 72 bp | GTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTaGAATGTTTGTCTACCAACCCTCTTCAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VECLAVVSMKIN*NVCLPTLFRGQ Trigger: CTGGCCTCTGAAGAGGGTTGGTAGACAAACATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATCAAACTTTAAAGCTGTaGCAAGGACAGCAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPVVECLAVVSMKINLNQTLKL*QGQQGQ Trigger: CTGGCCTTGCTGTCCTTGTCACAGCTTTAAAGTTTG...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR GCA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATGTTGGCAAGTGCACCTaGCTTCTCCAGAAAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLPVVECLAVVSMKINLNVGKCT*LLQKIL Trigger: TAGGATTTTCTGGAGAAGGCAGGTGCACTTGCCAAC...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR GCA 90 bp | GAATTATTATTTTCAAGGAACCTTCAATCACCCTCACGACTGAAGGTTGGAGAGTCTATTCGTTGCACATaGCTTGGGAACCCGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLFSRNLQSPSRLKVGESIRCT*LGNPKS Trigger: TGACTTCGGGTTCCCAAGGCATGTGCAACGAATAGA...CTCTCCAACCTTCAGTCGTGAGGGTGATTGAAGGTTCCTTGAAAATAATAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | AGACATTTCCAGCCTGCAATAAAAGTGAAATGGCTTTCCTTCTCAACAGGGCACCTTTCACATCATCCTTaGGGAGGTGAAATCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHFQPAIKVKWLSFSTGHLSHHP*GGEIYR Trigger: CCTATAGATTTCACCTCCCCAAGGATGATGTGAAAG...GTGCCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGCAGGCTGGAAATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | ATGCATCACGTGATGGACATCTTTCCACATTTGACTATTGTGAATAATGCTGCCACATTGGACATTAGCTaGGGAAAGGAGCTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: MHHVMDIFPHLTIVNNAATLDIS*GKELVM Trigger: CATCACCAGCTCCTTTCCCCAGCTAATGTCCAATGT...GGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | AATAGAATTATTATTTTCAAGGAACCTTCAATCACCCTCACGACTGAAGGTTGGAAGCCGCGTCCACATTaGACATTAGCTGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRIIIFKEPSITLTTEGWKPRPH*TLAGER Trigger: CCTTTCCCCAGCTAATGTCCAATGTGGACGCGGCTT...CCAACCTTCAGTCGTGAGGGTGATTGAAGGTTCCTTGAAAATAATAATTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | ATGCATCACGTGATGGACATCTTTCCACATTTGACTATTGTGAATAATGCTGCCGCATGGCCAAATTCATaGGCAGCAACGGTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: MHHVMDIFPHLTIVNNAAAWPNS*AATVNK Trigger: TTTATTCACCGTTGCTGCTCATGAATTTGGCCATGC...GGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACGGATATGGGGCATGGTaGGCTTTCCTGGGAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPHLFIHASRDGHLSTFDGYGAW*AFLGIF Trigger: AAATATTCCCAGGAAAGCCCACCATGCCCCATATCC...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATTCGTTGCACATGCCTTaGGAACCCGAAGTCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPVVECLAVVSMKINLNSLHMP*EPEVIN Trigger: ATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGA...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| 3UTR CAA 72 bp | TCATACATGCATCACGTGATGGACATCTTTCCACATTaGACTATTGTGAATAATGCTGCCGTGAACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYMHHVMDIFPH*TIVNNAAVNTG Trigger: ACCAGTGTTCACGGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGGAATGTTTTCCGTCCTaGAAAGAAGTAAATGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVLPVVECLAVVSMKINLECFPS*KEVNVA Trigger: GGCTACATTTACTTCTTTTCAGGACGGAAAACATTC...CAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR GCA 90 bp | AGACATTTCCAGCCTGCAATAAAAGTGAAATGGCTTTCCTTCTCAACAGGGCACAGATATCATGATATCTaGTTCCCCAGAGTTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHFQPAIKVKWLSFSTGHRYHDI*FPRVYS Trigger: AGAATAAACTCTGGGGAAGCAGATATCATGATATCT...GTGCCCTGTTGAGAAGGAAAGCCATTTCACTTTTATTGCAGGCTGGAAATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CCA 90 bp | GCCAAATGGAACACTTGCAGTAACAGAGTATCAGTTAGTCTTTTCATGACTATAACAGCAGCATCTATATaGCCACTCACTCCTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AKWNTCSNRVSVSLFMTITAASI*PLTPEN Trigger: GTTTTCAGGAGTGAGTGGCCATATAGATGCTGCTGT...TATAGTCATGAAAAGACTAACTGATACTCTGTTACTGCAAGTGTTCCATTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | GAATTATTATTTTCAAGGAACCTTCAATCACCCTCACGACTGAAGGTTGGAGAGTTTCAAAAGATATCATaGTATCTGCTTCCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLFSRNLQSPSRLKVGEFQKIS*YLLPQS Trigger: ACTCTGGGGAAGCAGATATCATGATATCTTTTGAAA...CTCTCCAACCTTCAGTCGTGAGGGTGATTGAAGGTTCCTTGAAAATAATAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACAGAAAATCCTATCCTTaGAGAACAGAAGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPHLFIHASRDGHLSTFDRKSYP*RTEAPF Trigger: GAAAGGAGCTTCTGTTCTTCAAGGATAGGATTTTCT...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATTCTCTGTATCATACTTaGATGTTTTCCGTCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLPVVECLAVVSMKINLNSLYHT*MFSVLK Trigger: TTTCAGGACGGAAAACATTCAAGTATGATACAGAGA...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS TCA 90 bp | CGTAAGCCGCGTCCACATTGGACATTAGCTGGGGAAAGGAGCTGGTaGTGGTGCTGGGCCGAATCCCTGTTGGCAAGTGCACCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKPRPHWTLAGERSW*WCWAESLLASAPAF Trigger: GAAGGCAGGTGCACTTGCCAACAGGGATTCGGCCCAGCACCATCACCAGCTCCTTTCCCCAGCTAATGTCCAATGTGGACGCGGCTTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CCA 90 bp | CACTGCATCAAAGGACGAGCTGGAGTCACAGAGGTCGGGGATAGATaGCTTGTGAGGTGGGATATGGGGCATGGTGGGCTTTCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HCIKGRAGVTEVGDR*LVRWDMGHGGLSWE Trigger: TTCCCAGGAAAGCCCACCATGCCCCATATCCCACCTCACAAGCCATCTATCCCCGACCTCTGTGACTCCAGCTCGTCCTTTGATGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 90 bp | GTTCAGAGGGACAGCTGTACTCCACGCATGCAGGGCCATCTGTATTaGCTTGTCCACCTCAGTGGGACTCATGGAGGGTGTGTACTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VQRDSCTPRMQGHLY*LVHLSGTHGGCVLR Trigger: TCTAAGTACACACCCTCCATGAGTCCCACTGAGGTGGACAAGGCAATACAGATGGCCCTGCATGCGTGGAGTACAGCTGTCCCTCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 90 bp | CTGGGGGCCTCCTTTCTTTGTATAATACTTGTCAAGATAGGCCTGTaGAAGGTGGTAGTTGCTCCTGAAGGTCCTAGGGGTGGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGASFLCIILVKIGL*KVVVAPEGPRGGCQ Trigger: CTGGCAGCCACCCCTAGGACCTTCAGGAGCAACTACCACCTTGCACAGGCCTATCTTGACAAGTATTATACAAAGAAAGGAGGCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 90 bp | GGAAAGGAGCTGGTGATGGTGCTGGGCCGAATCCCTGTTGGCAAGTaGACCTGCCTTCTCCAGAAAATCCTATCCTTGAAGAACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKELVMVLGRIPVGK*TCLLQKILSLKNRS Trigger: GCTTCTGTTCTTCAAGGATAGGATTTTCTGGAGAAGGCAGGTGCACTTGCCAACAGGGATTCGGCCCAGCACCATCACCAGCTCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 90 bp | GAGCTGGTGATGGTGCTGGGCCGAATCCCTGTTGGCAAGTGCACCTaGCTTCTCCAGAAAATCCTATCCTTGAAGAACAGAAGCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELVMVLGRIPVGKCT*LLQKILSLKNRSSF Trigger: AAAGGAGCTTCTGTTCTTCAAGGATAGGATTTTCTGGAGAAGGCAGGTGCACTTGCCAACAGGGATTCGGCCCAGCACCATCACCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 90 bp | GAGTTTATTCTAACGAAGTTCAGAGGGACAGCTGTACTCCACGCATaGAGGGCCATCTGTATTGCCTTGTCCACCTCAGTGGGACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: EFILTKFRGTAVLHA*RAICIALSTSVGLM Trigger: CATGAGTCCCACTGAGGTGGACAAGGCAATACAGATGGCCCTGCATGCGTGGAGTACAGCTGTCCCTCTGAACTTCGTTAGAATAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CCA 90 bp | TATTCGTTGCACATGCCTTGGGAACCCGAAGTCATAAATTGTCCGTaGAGGACCTTGCATATGGAATCCTCGAGTGACCCAGTAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLHMPWEPEVINCP*RTLHMESSSDPVVR Trigger: CCTCACTACTGGGTCACTCGAGGATTCCATATGCAAGGTCCTCCACGGACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CCA 90 bp | AGGCTCCTTGAGGTAGACAGCAGCATCTATTCGTTGCACATGCCTTaGGAACCCGAAGTCATAAATTGTCCGTGGAGGACCTTGCATATG | + |
|
Preference number: 5 (lower is better) Translates to: RLLEVDSSIYSLHMP*EPEVINCPWRTLHM Trigger: CATATGCAAGGTCCTCCACGGACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAATAGATGCTGCTGTCTACCTCAAGGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGCAACGGTGAATAAATaGAACCCATTCGTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: CTHMCRRPRKPPERIRLPATVNK*NPFVPI Trigger: TATGGGAACGAATGGGTTCAATTTATTCACCGTTGC...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | GCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTGCAGAAAATCCTATCCTaGAAGAACAGAAGCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHICAGAQGSHQRGSDCLQKILS*KNRSSF Trigger: AAAGGAGCTTCTGTTCTTCAAGGATAGGATTTTCTG...CAGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS TCA 90 bp | TGTAGTATTCCTCTCCCACAAAGAAAAGGGTCTTCTGAGGCTCCTTaGGGTAGACAGCAGCATCTATTCGTTGCACATGCCTTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: CSIPLPQRKGSSEAP*GRQQHLFVAHALGT Trigger: GGTTCCCAAGGCATGTGCAACGAATAGATGCTGCTGTCTACCTCAAGGAGCCTCAGAAGACCCTTTTCTTTGTGGGAGAGGAATACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | GTATGCATGTCAATATGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGCCACAGCGAGGCTTCTaGATCACATTCATTGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: VCMSICTHMCRRPRKPPEPQRGF*ITFIVF Trigger: GAATACAATGAATGTGATCAAGAAGCCTCGCTGTGG...CTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCATATTGACATGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | AAATGGCTTTCCTTCTCAACAGGGCACCTTGAGCTTAGACAGCAAAGATACCAGAGCAGCATCTATTCGTaGCACATGCCTTGGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: KWLSFSTGHLELRQQRYQSSIYS*HMPWEP Trigger: GGGTTCCCAAGGCATGTGCAACGAATAGATGCTGCT...CTGGTATCTTTGCTGTCTAAGCTCAAGGTGCCCTGTTGAGAAGGAAAGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | ATGCATCACGTGATGGACATCTTTCCACATTTGACTATTGTGAATAATGCTGCCTGGGGTTGCTTTCTCTaGCCACCATCTCGCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MHHVMDIFPHLTIVNNAAWGCFL*PPSRQP Trigger: AGGCTGGCGAGATGGTGGCAAGAGAAAGCAACCCCA...GGCAGCATTATTCACAATAGTCAAATGTGGAAAGATGTCCATCACGTGATGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | TGCACACATATGTGCAGGCGCCCAAGGAAGCCACCAGAGAGGATCAGATTGCCTTTCTCTGTATCATACTaGAATGTTTTCCGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTHMCRRPRKPPERIRLPFSVSY*NVFRPE Trigger: TTCAGGACGGAAAACATTCAAGTATGATACAGAGAA...AGGCAATCTGATCCTCTCTGGTGGCTTCCTTGGGCGCCTGCACATATGTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | AATAGAATTATTATTTTCAAGGAACCTTCAATCACCCTCACGACTGAAGGTTGGGCAGGGCCATCTGTATaGCCTTGTCCACCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRIIIFKEPSITLTTEGWAGPSV*PCPPQW Trigger: CCACTGAGGTGGACAAGGCAATACAGATGGCCCTGC...CCAACCTTCAGTCGTGAGGGTGATTGAAGGTTCCTTGAAAATAATAATTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGGCTCCTTTCCCAACATaGTCACTGCATCAAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KVLPVVECLAVVSMKINLAPFPT*SLHQRT Trigger: CGTCCTTTGATGCAGTGACAATGTTGGGAAAGGAGC...CAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACTGTCCGTGGAGGACCTaGCATATGGAATCCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPHLFIHASRDGHLSTFDCPWRT*HMESSS Trigger: ACTCGAGGATTCCATATGCAAGGTCCTCCACGGACA...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGACCCGAAGTCATAAATaGTCCGTGGAGGACCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KVLPVVECLAVVSMKINLTRSHK*SVEDLA Trigger: TGCAAGGTCCTCCACGGACAATTTATGACTTCGGGT...CAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATGGGGGCCTCCTTTCTTaGTATAATACTTGTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLPVVECLAVVSMKINLNGGLLS*YNTCQD Trigger: ATCTTGACAAGTATTATACAAAGAAAGGAGGCCCCC...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | GTTCTCCCTGTTGTAGAGTGTCTGGCTGTTGTGAGCATGAAGATTAATTTGAATTCTGGTACTTATAAGTaGGGTACATCAGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLPVVECLAVVSMKINLNSGTYK*GTSVLM Trigger: CATCAGCACTGATGTACCCAACTTATAAGTACCAGA...ATTCAAATTAATCTTCATGCTCACAACAGCCAGACACTCTACAACAGGGAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS TCA 90 bp | AACCACGTCTTCCTTCTCTGTATCATACTTGAATGTTTTCCGTCCTaGAAAGAAGTAAATGTAGCCATTCAGTTCCACAGCAGCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: NHVFLLCIILECFPS*KEVNVAIQFHSSIY Trigger: ATAGATGCTGCTGTGGAACTGAATGGCTACATTTACTTCTTTTCAGGACGGAAAACATTCAAGTATGATACAGAGAAGGAAGACGTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS-3UTR CAA 90 bp | CTACCACATTTATTCATACATGCATCACGTGATGGACATCTTTCCACATTTGACAACTTCCCAGTGACTTaGAGGCCAAAGAATATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPHLFIHASRDGHLSTFDNFPVT*RPKNIC Trigger: ACAAATATTCTTTGGCCTCAAAGTCACTGGGAAGTT...GTCAAATGTGGAAAGATGTCCATCACGTGATGCATGTATGAATAAATGTGGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS TCA 72 bp | GAGCTGGAGTCACAGAGGTCGGGGATAGATGGCTTGTaGGGTGGGATATGGGGCATGGTGGGCTTTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELESQRSGIDGL*GGIWGMVGFPG Trigger: CCCAGGAAAGCCCACCATGCCCCATATCCCACCTCACAAGCCATCTATCCCCGACCTCTGTGACTCCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS TCA 72 bp | CGTCCACATTGGACATTAGCTGGGGAAAGGAGCTGGTaGTGGTGCTGGGCCGAATCCCTGTTGGCAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPHWTLAGERSW*WCWAESLLASA Trigger: TGCACTTGCCAACAGGGATTCGGCCCAGCACCATCACCAGCTCCTTTCCCCAGCTAATGTCCAATGTGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 72 bp | GACAGCTGTACTCCACGCATGCAGGGCCATCTGTATTaGCTTGTCCACCTCAGTGGGACTCATGGAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DSCTPRMQGHLY*LVHLSGTHGGC Trigger: ACACCCTCCATGAGTCCCACTGAGGTGGACAAGGCAATACAGATGGCCCTGCATGCGTGGAGTACAGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CCA 72 bp | AAAGGACGAGCTGGAGTCACAGAGGTCGGGGATAGATaGCTTGTGAGGTGGGATATGGGGCATGGTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KGRAGVTEVGDR*LVRWDMGHGGL Trigger: AAGCCCACCATGCCCCATATCCCACCTCACAAGCCATCTATCCCCGACCTCTGTGACTCCAGCTCGTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CAA 72 bp | GCTGTACTCCACGCATGCAGGGCCATCTGTATTGCCTaGTCCACCTCAGTGGGACTCATGGAGGGTGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AVLHACRAICIA*STSVGLMEGVY Trigger: GTACACACCCTCCATGAGTCCCACTGAGGTGGACAAGGCAATACAGATGGCCCTGCATGCGTGGAGTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS CCA 72 bp | GGAGTCACAGAGGTCGGGGATAGATGGCTTGTGAGGTaGGATATGGGGCATGGTGGGCTTTCCTGGGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: GVTEVGDRWLVR*DMGHGGLSWEY Trigger: ATATTCCCAGGAAAGCCCACCATGCCCCATATCCCACCTCACAAGCCATCTATCCCCGACCTCTGTGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
||
| CDS GCA 72 bp | CTAACGAAGTTCAGAGGGACAGCTGTACTCCACGCATaGAGGGCCATCTGTATTGCCTTGTCCACCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTKFRGTAVLHA*RAICIALSTSV Trigger: CACTGAGGTGGACAAGGCAATACAGATGGCCCTGCATGCGTGGAGTACAGCTGTCCCTCTGAACTTCGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CCA 72 bp | AAAGGAGCTGGTGATGGTGCTGGGCCGAATCCCTGTTaGCAAGTGCACCTGCCTTCTCCAGAAAATCCTATC | + |
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Preference number: 6 (lower is better) Translates to: KGAGDGAGPNPC*QVHLPSPENPI Trigger: GATAGGATTTTCTGGAGAAGGCAGGTGCACTTGCCAACAGGGATTCGGCCCAGCACCATCACCAGCTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | TTGCTCCTGAAGGTCCTAGGGGTGGCTGCCAGTAGGTaGGGGTCTGCAGTGGCAAACTTTAAAGCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLLKVLGVAASR*GSAVANFKAVT Trigger: TGTCACAGCTTTAAAGTTTGCCACTGCAGACCCCAACCTACTGGCAGCCACCCCTAGGACCTTCAGGAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | AGGCCAAAGAATATTTGTAGCTCCTTAATCCTCCTGATCATGGGGTaGCTTTCTCTTGCCACCATCTCGCCAGCCTGGGGGCCTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPKNICSSLILLIMG*LSLATISPAWGPPF Trigger: GAAAGGAGGCCCCCAGGCTGGCGAGATGGTGGCAAGAGAAAGCAACCCCATGATCAGGAGGATTAAGGAGCTACAAATATTCTTTGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | TGCTTTCTCTTGCCACCATCTCGCCAGCCTGGGGGCCTCCTTTCTTaGTATAATACTTGTCAAGATAGGCCTGTGCAAGGTGGTAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFLLPPSRQPGGLLS*YNTCQDRPVQGGSC Trigger: GCAACTACCACCTTGCACAGGCCTATCTTGACAAGTATTATACAAAGAAAGGAGGCCCCCAGGCTGGCGAGATGGTGGCAAGAGAAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | AAGGGTCTTCTGAGGCTCCTTGAGGTAGACAGCAGCATCTATTCGTaGCACATGCCTTGGGAACCCGAAGTCATAAATTGTCCGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KGLLRLLEVDSSIYS*HMPWEPEVINCPWR Trigger: CCTCCACGGACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAATAGATGCTGCTGTCTACCTCAAGGAGCCTCAGAAGACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS TCA 72 bp | CCTCTCCCACAAAGAAAAGGGTCTTCTGAGGCTCCTTaGGGTAGACAGCAGCATCTATTCGTTGCACATGCC | + |
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Preference number: 6 (lower is better) Translates to: PLPQRKGSSEAP*GRQQHLFVAHA Trigger: GGCATGTGCAACGAATAGATGCTGCTGTCTACCTCAAGGAGCCTCAGAAGACCCTTTTCTTTGTGGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS GCA 72 bp | ATGGTGCTGGGCCGAATCCCTGTTGGCAAGTGCACCTaGCTTCTCCAGAAAATCCTATCCTTGAAGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: MVLGRIPVGKCT*LLQKILSLKNR Trigger: TCTGTTCTTCAAGGATAGGATTTTCTGGAGAAGGCAGGTGCACTTGCCAACAGGGATTCGGCCCAGCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CCA 72 bp | GAGGTAGACAGCAGCATCTATTCGTTGCACATGCCTTaGGAACCCGAAGTCATAAATTGTCCGTGGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: EVDSSIYSLHMP*EPEVINCPWRT Trigger: GGTCCTCCACGGACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAATAGATGCTGCTGTCTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | TTGCCACCATCTCGCCAGCCTGGGGGCCTCCTTTCTTaGTATAATACTTGTCAAGATAGGCCTGTGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPPSRQPGGLLS*YNTCQDRPVQG Trigger: ACCTTGCACAGGCCTATCTTGACAAGTATTATACAAAGAAAGGAGGCCCCCAGGCTGGCGAGATGGTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | AATATTTGTAGCTCCTTAATCCTCCTGATCATGGGGTaGCTTTCTCTTGCCACCATCTCGCCAGCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NICSSLILLIMG*LSLATISPAWG Trigger: CCCCCAGGCTGGCGAGATGGTGGCAAGAGAAAGCAACCCCATGATCAGGAGGATTAAGGAGCTACAAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | CATCCTTGGGGAGGTGAAATCTATAGGGGTTCTGGTACTTATAAGTaGGGTACATCAGTGCTGATGGATCTGTGGAATGGCCCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: HPWGGEIYRGSGTYK*GTSVLMDLWNGPGP Trigger: TGGGCCTGGGCCATTCCACAGATCCATCAGCACTGATGTACCCAACTTATAAGTACCAGAACCCCTATAGATTTCACCTCCCCAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | TTCGTTGCACATGCCTTGGGAACCCGAAGTCATAAATaGTCCGTGGAGGACCTTGCATATGGAATCCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: FVAHALGTRSHK*SVEDLAYGILE Trigger: CTCGAGGATTCCATATGCAAGGTCCTCCACGGACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | CTGAGGCTCCTTGAGGTAGACAGCAGCATCTATTCGTaGCACATGCCTTGGGAACCCGAAGTCATAAATTGT | + |
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Preference number: 6 (lower is better) Translates to: LRLLEVDSSIYS*HMPWEPEVINC Trigger: ACAATTTATGACTTCGGGTTCCCAAGGCATGTGCAACGAATAGATGCTGCTGTCTACCTCAAGGAGCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | GTGAATAAATTGAACCCATTCGTTCCCATAGTCCACTTCTCAGCATaGTCGAAATGTGTGTCTCCTCCCAGGCCTTCTCCAGGAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VNKLNPFVPIVHFSA*SKCVSPPRPSPGAN Trigger: ATTTGCTCCTGGAGAAGGCCTGGGAGGAGACACACATTTCGACAATGCTGAGAAGTGGACTATGGGAACGAATGGGTTCAATTTATTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | GGAGGTGAAATCTATAGGGGTTCTGGTACTTATAAGTaGGGTACATCAGTGCTGATGGATCTGTGGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: GGEIYRGSGTYK*GTSVLMDLWNG Trigger: GCCATTCCACAGATCCATCAGCACTGATGTACCCAACTTATAAGTACCAGAACCCCTATAGATTTCACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 90 bp | TTCTTGATCACATTCATTGTATTCTGGTCCAACTTCCCAGTGACTTaGAGGCCAAAGAATATTTGTAGCTCCTTAATCCTCCTGATCATG | + |
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Preference number: 6 (lower is better) Translates to: FLITFIVFWSNFPVT*RPKNICSSLILLIM Trigger: CATGATCAGGAGGATTAAGGAGCTACAAATATTCTTTGGCCTCAAAGTCACTGGGAAGTTGGACCAGAATACAATGAATGTGATCAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS GCA 72 bp | CCCATGATCTCCAGTTTCAAAAGATATCATGATATCTaGTTCCCCAGAGTTTATTCTAACGAAGTTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PMISSFKRYHDI*FPRVYSNEVQR Trigger: CCTCTGAACTTCGTTAGAATAAACTCTGGGGAAGCAGATATCATGATATCTTTTGAAACTGGAGATCATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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| CDS CAA 72 bp | ACATTCATTGTATTCTGGTCCAACTTCCCAGTGACTTaGAGGCCAAAGAATATTTGTAGCTCCTTAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: TFIVFWSNFPVT*RPKNICSSLIL Trigger: GAGGATTAAGGAGCTACAAATATTCTTTGGCCTCAAAGTCACTGGGAAGTTGGACCAGAATACAATGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034487.4 |
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