Pregenerated sensors for MMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031740Ensembl transcript IDs: ENSMUST00000034187.9, ENSMUST00000211567.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCAGAGGAGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTaGGCAGGAAGGAGAAGCAGCACCCGGGAGGGTACAGTCAGCACC | + |
|
Preference number: 1 (lower is better) Translates to: AQRRAALQISKHPLG*AGRRSSTREGTVST Trigger: GGTGCTGACTGTACCCTCCCGGGTGCTGCTTCTCCTTCCTGCCCACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCTCCTCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR GCA 90 bp | GTGTCTCTGATTTCCACCTTGGCACACCTGTACCCCACTGCCCCATaGCAGGCTGTTAACAGGGCCACCAGTGCCCTCCTAAGCCAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: VSLISTLAHLYPTAP*QAVNRATSALLSQS Trigger: AGACTGGCTTAGGAGGGCACTGGTGGCCCTGTTAACAGCCTGGCATGGGGCAGTGGGGTACAGGTGTGCCAAGGTGGAAATCAGAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CCA 90 bp | GAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGCTaGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTGCTTCACATC | + |
|
Preference number: 1 (lower is better) Translates to: EATLLNLKSPGEGEG*LTTEEDRAARLLHI Trigger: GATGTGAAGCAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR GCA 90 bp | CATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATaGAGTGGAGTGGAAAACTGGTGTGCAGCGATGAAGATGATAGGG | + |
|
Preference number: 1 (lower is better) Translates to: HHAAMSDNPSPLGRK*SGVENWCAAMKMIG Trigger: CCCTATCATCTTCATCGCTGCACACCAGTTTTCCACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| 3UTR TCA 90 bp | TTGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTaGAGGAGAAGGCTGGTTAACTACAGAGGAGGACAGAGCCGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: LGTKRSHPLKSEVTR*RRRLVNYRGGQSRQ Trigger: CTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CCA 90 bp | GCTGAAAGCCATAAAAAGGTCATAGATGTTGAAGAACCAGAAGAGTaGAGCACCAGGGCAGCCCAGAGGAGGGCTGCATTGCAAATATCC | + |
|
Preference number: 1 (lower is better) Translates to: AESHKKVIDVEEPEE*STRAAQRRAALQIS Trigger: GGATATTTGCAATGCAGCCCTCCTCTGGGCTGCCCTGGTGCTCCACTCTTCTGGTTCTTCAACATCTATGACCTTTTTATGGCTTTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CCA 90 bp | CGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTaGAAAACTGAAAAGGTTGAAGGAAACGAGCGAAGGGCATACAAA | + |
|
Preference number: 1 (lower is better) Translates to: RCQTTRVLWAGNAVE*KTEKVEGNERRAYK Trigger: TTTGTATGCCCTTCGCTCGTTTCCTTCAACCTTTTCAGTTTTCCACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CAA 90 bp | CGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTaGGGCAGGAAATGCAGTGGAGTGGAAAACTGGTGTGCAGCGATG | + |
|
Preference number: 2 (lower is better) Translates to: RAEMHHAAMSDNPSP*GRKCSGVENWCAAM Trigger: CATCGCTGCACACCAGTTTTCCACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGGGAAATGCAGTGGAGTaGAAAACTGGTGTGCAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: HRVRRGTITRRAEMHHAAGNAVE*KTGVQR Trigger: TCGCTGCACACCAGTTTTCCACTCCACTGCATTTCC...CGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGGTGAAGGAGAAGGCTaGTTAACTACAGAGGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DLHRVRRGTITRRAEMHHGEGEG*LTTEED Trigger: GTCCTCCTCTGTAGTTAACCAGCCTTCTCCTTCACC...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CAA 90 bp | AGGAAGGAGAAGCAGCACCCGGGAGGGTACAGTCAGCACCTTTCTTaGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKEKQHPGGYSQHLS*GTKRSHPLKSEVTR Trigger: CCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTACCCTCCCGGGTGCTGCTTCTCCTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGACAACAGTTAAGGTGGTaGAGGTGTCTGGGCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: YLYLFAISHGELLKGEARQQLRW*RCLGSR Trigger: TCTGCTGCCCAGACACCTGCACCACCTTAACTGTTG...TCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAGGGCAGGAAATGCAGTaGAGTGGAAAACTGGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: YLYLFAISHGELLKGEARGQEMQ*SGKLVC Trigger: GCACACCAGTTTTCCACTCCACTGCATTTCCTGCCC...TCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| 3UTR GCA 72 bp | ATTTCCACCTTGGCACACCTGTACCCCACTGCCCCATaGCAGGCTGTTAACAGGGCCACCAGTGCCCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ISTLAHLYPTAP*QAVNRATSALL Trigger: TAGGAGGGCACTGGTGGCCCTGTTAACAGCCTGGCATGGGGCAGTGGGGTACAGGTGTGCCAAGGTGGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CCA 72 bp | AGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTaGGCAGGAAGGAGAAGCAGCACCCGGGAGGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: RAALQISKHPLG*AGRRSSTREGT Trigger: TGTACCCTCCCGGGTGCTGCTTCTCCTTCCTGCCCACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGACAACCCGAGTCCTTaGGGCAGGAAATGCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLHRVRRGTITRRAEMHHDNPSP*GRKCSG Trigger: TCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTC...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| 3UTR GCA 72 bp | CGAGCGAAGGGCATACAAAAGCAACAGTTAAGGTGGTaGAGGTGTCTGGGCAGCAGAAAGGGTGAAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAKGIQKQQLRW*RCLGSRKGETR Trigger: CCTGGTTTCACCCTTTCTGCTGCCCAGACACCTGCACCACCTTAACTGTTGCTTTTGTATGCCCTTCGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR CCA 72 bp | CTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGCTaGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLNLKSPGEGEG*LTTEEDRAARL Trigger: CAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| 3UTR TCA 72 bp | AAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTaGAGGAGAAGGCTGGTTAACTACAGAGGAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KRSHPLKSEVTR*RRRLVNYRGGQ Trigger: CTGTCCTCCTCTGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGAGGAAGTGACTGGGCATGATCTGCACAGAGTGAGGAGGGGAACCATCAGCGGTAGCCATCGGTaGGGCCCTCGGTGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVEEVTGHDLHRVRRGTISGSHR*GPRWYS Trigger: GCTGTACCACCGAGGGCCGCACCGATGGCTACCGCT...GATGGTTCCCCTCCTCACTCTGTGCAGATCATGCCCAGTCACTTCCTCCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGAGGAAGTGACTGGGCATGATCTGCACAGAGTGAGGAGGGGAACCATCACACCTTGCCATCGTTaGGGCCGGCGCTGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVEEVTGHDLHRVRRGTITPCHR*GRRWCS Trigger: GCTGCACCAGCGCCGGCCGCAACGATGGCAAGGTGT...GATGGTTCCCCTCCTCACTCTGTGCAGATCATGCCCAGTCACTTCCTCCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAAGCCACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGCCCCAGGCTGGTCAGTaGCTTGGGGTATCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQEATDLVLLHPVEEVTGPQAGQ*LGVSSL Trigger: GAGCGAGGATACCCCAAGCCACTGACCAGCCTGGGG...CCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGTGGCTTCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAGGTCATAGTCCTCGGTaGTGCCACACCAGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGEPSLGGLRCIMQRCQTGHSPR*CHTSGS Trigger: GCTACCGCTGGTGTGGCACCACCGAGGACTATGACC...TGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAAGCCACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGGGCTGGTCAGTGGCTTaGGGTATCCTCGCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQEATDLVLLHPVEEVTGGWSVA*GILAPE Trigger: CTCTGGAGCGAGGATACCCCAAGCCACTGACCAGCC...CCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGTGGCTTCCTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCGCAGCATCTACTTGCTaGACATCAGGGGGCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRAEMHHAAMSDNPSPLGAASTC*TSGGNP Trigger: GGGGTTGCCCCCTGATGTCCAGCAAGTAGATGCTGC...GCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR GCA 90 bp | TCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTCTCCCCCAACACCAGTaGCCGGGGCAAAGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSDVRQPESFGQEMQWSLPQHQ*PGQRHV Trigger: CACATGCCTTTGCCCCGGGCACTGGTGTTGGGGGAG...ACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCACATAGTCCTCGGTGGTaGCACACCAGCGGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHRVRRGTITRRAEMHHAHSPRW*HTSGSH Trigger: ATGGCTACCGCTGGTGTGGCACCACCGAGGACTATG...TGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTGTGCGGCCGGCGCTGGTaGAGCTCTCATACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAMSDNPSPLGRKCSGVCGRRW*SSHTCC Trigger: GCAACAAGTATGAGAGCTGCACCAGCGCCGGCCGCA...CACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCTCAAGGTCACCTGTCTaGGGCAGCCCAAAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAEMHHAAMSDNPSPLGSRSPV*GSPKNF Trigger: GAAGTTCTTTGGGCTGCCCCAGACAGGTGACCTTGA...GCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGTCCGCATGGTCTCGATaGTGTTCTGGTCAAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRVRRGTITRRAEMHHAASAWSR*CSGQGH Trigger: GTGACCTTGACCAGAACACCATCGAGACCATGCGGA...CGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCATCCAGCCCCATGGCATaGCCGAACTCATGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCIMQRCQTTRVLWAGNASSPMA*PNSWAA Trigger: GGCAGCCCATGAGTTCGGCCATGCCATGGGGCTGGA...TGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | ACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTAGTGTTCCAGCCCCATaGCATGGCCGAACTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TITRRAEMHHAAMSDNPSSVPAP*HGRTHG Trigger: CCCATGAGTTCGGCCATGCCATGGGGCTGGAACACT...ACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | ACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCAGCAAGGGACCTGTaGGCTTGTCACGTGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TITRRAEMHHAAMSDNPSPARDL*ACHVVS Trigger: TGACACCACGTGACAAGCCCACAGGTCCCTTGCTGG...ACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | ACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGCATGATCTGCACGGCTGGTCAGTGGCTTaGGGTATCCTCGCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDLVLLHPVEEVTGHDLHGWSVA*GILAPE Trigger: CTCTGGAGCGAGGATACCCCAAGCCACTGACCAGCC...GTGCAGATCATGCCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTGGGCAGGAAGGAGAAGCGCAGCATCTACTTGCTaGACATCAGGGGGCAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAALQISKHPLGWAGRRSAASTC*TSGGNP Trigger: GGGGTTGCCCCCTGATGTCCAGCAAGTAGATGCTGC...GCTTCTCCTTCCTGCCCACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGGTTCTTGTCCCACTTaGGCTTGCGGGGGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLHRVRRGTITRRAEMHHGSCPT*ACGGRS Trigger: ACTTCTTCCCCCGCAAGCCCAAGTGGGACAAGAACC...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACACCAGCCAGTCTGATTTaGTGCTTCCAAACTTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GGEPSLGGLRCIMQRCQTPASLI*CFQTSR Trigger: GCGTGAAGTTTGGAAGCATCAAATCAGACTGGCTGG...TGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCCCAGGAGTCCATCCTTaGCATCAAATGGGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRAEMHHAAMSDNPSPLGPGVHP*HQMGIH Trigger: ATGGATACCCATTTGATGGCAAGGATGGACTCCTGG...GCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTGAGAGGAAGCCATCACTaGGACCAGTGTCTGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAMSDNPSPLGRKCSGVRGSHH*DQCLYS Trigger: GCTGTACAGACACTGGTCGCAGTGATGGCTTCCTCT...CACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | AGCCATAAAAAGGTCATAGATGTTGAAGAACCAGAAGAGTGGAGCACCAGGGCATCGCACACCACACCTTaGCATCGTTGCGGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKKVIDVEEPEEWSTRASHTTP*HRCGRR Trigger: GCGCCGGCCGCAACGATGGCAAGGTGTGGTGTGCGA...TGCCCTGGTGCTCCACTCTTCTGGTTCTTCAACATCTATGACCTTTTTATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTGGGCAGGAAGGAGAAGCGGCATTCCAGGAGTCTaGGATGAGCTTAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RAALQISKHPLGWAGRRSGIPGV*DELRET Trigger: GGTTTCCCTAAGCTCATCGCAGACTCCTGGAATGCC...GCTTCTCCTTCCTGCCCACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGTCTCGATGGTGTTCTaGTCAAGGTCACCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLHRVRRGTITRRAEMHHVSMVF*SRSPVW Trigger: CCAGACAGGTGACCTTGACCAGAACACCATCGAGAC...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAGGAAGAAGTTGTAGTTaGCCACATCTGGGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGEPSLGGLRCIMQRCQTGRSCS*PHLGCH Trigger: GTGGCAACCCAGATGTGGCCAACTACAACTTCTTCC...TGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTGGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTGCTTCACATCCTCATCGTAGTTGGTTGTaGTCGCACACCACACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVNYRGGQSRQAASHPHRSWL*SHTTPC Trigger: GCAAGGTGTGGTGTGCGACCACAACCAACTACGATG...AGGATGTGAAGCAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGAAGCCACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGCAAACTTCACGCTCTTaGGACTTTGGTTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQEATDLVLLHPVEEVTGQTSRS*DFGSPA Trigger: AGCTGGAGAACCAAAGTCTCAAGAGCGTGAAGTTTG...CCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGTGGCTTCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR TCA 90 bp | ACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCAGCCAGTCTGATTTaGTGCTTCCAAACTTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: TITRRAEMHHAAMSDNPSPASLI*CFQTSR Trigger: GCGTGAAGTTTGGAAGCATCAAATCAGACTGGCTGG...ACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR GCA 90 bp | ACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGCATGATCTGCACTCAGCACAAAGAGGTTaGAACTCTCCTTGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDLVLLHPVEEVTGHDLHSAQRG*NSPWGS Trigger: GCTGCCCCAAGGAGAGTTGCAACCTCTTTGTGCTGA...GTGCAGATCATGCCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CCGGGAGGGTACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTGCAGGGCTGTCCATCTaGATTGCCACCCATGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGYSQHLSLGTKRSHPLAGLSI*IATHGK Trigger: TTTACCATGGGTGGCAATGCAGATGGACAGCCCTGC...AAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTACCCTCCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGAGGAAGTGACTGGGCATGATCTGCACAGAGTGAGGAGGGGAACCATCCACGGATCTGAGCGATaGCATCAAAGACAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVEEVTGHDLHRVRRGTIHGSER*HQRQCP Trigger: AGGACATTGTCTTTGATGGCATCGCTCAGATCCGTG...GATGGTTCCCCTCCTCACTCTGTGCAGATCATGCCCAGTCACTTCCTCCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTGGGCAGGAAGGAGAAGCCCAGTACTCATTCCCTaGGAAGAACACAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAALQISKHPLGWAGRRSPVLIP*EEHSLL Trigger: GAGAAGGCTGTGTTCTTCGCAGGGAATGAGTACTGG...GCTTCTCCTTCCTGCCCACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGCTGGTTAACTACAGCTCAGGCCAGAATGTaGCCACCAGCAAGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLLNLKSPGEGEGWLTTAQARM*PPARDL Trigger: CAGGTCCCTTGCTGGTGGCCACATTCTGGCCTGAGC...TGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGACCCCAGGCTGGTCAGTaGCTTGGGGTATCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWAQKEATLLNLKSPGEGPQAGQ*LGVSSL Trigger: GAGCGAGGATACCCCAAGCCACTGACCAGCCTGGGG...TCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | ACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGCATGATCTGCACGCAGCCCAGCCAGTCTaGTTTGATGCTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TDLVLLHPVEEVTGHDLHAAQPV*FDASKL Trigger: AAGTTTGGAAGCATCAAATCAGACTGGCTGGGCTGC...GTGCAGATCATGCCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGAAATGCAGTGGAGTGGAAAACTGGTGTGCAGCGATGAAGATGATAGGGAAGGCAGCATCTACTTaGTGGACATCAGGGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKCSGVENWCAAMKMIGKAAST*WTSGGN Trigger: GTTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTT...CCCTATCATCTTCATCGCTGCACACCAGTTTTCCACTCCACTGCATTTCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | CCGGGAGGGTACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTATCTTGGCTTCCGCATaGTCTCGATGGTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGYSQHLSLGTKRSHPLILASA*SRWCSG Trigger: ACCAGAACACCATCGAGACCATGCGGAAGCCAAGAT...AAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTACCCTCCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AATGCAGTGGAGTGGAAAACTGAAAAGGTTGAAGGAAACGAGCGAAGGGCATACCGTTGCGGCCGGCGCTaGTGCAGCTCTCATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAVEWKTEKVEGNERRAYRCGRR*CSSHTC Trigger: ACAAGTATGAGAGCTGCACCAGCGCCGGCCGCAACG...GTATGCCCTTCGCTCGTTTCCTTCAACCTTTTCAGTTTTCCACTCCACTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTGGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTGCTTCACATCCTAATAGGCTATATCCTTaGTCAGGACAGAAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVNYRGGQSRQAASHPNRLYP*SGQKPH Trigger: GTGGGGCTTCTGTCCTGACCAAGGATATAGCCTATT...AGGATGTGAAGCAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | AGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGCAGCCCAGCCAGTCTaGTTTGATGCTTCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RCIMQRCQTTRVLWAGNAAAQPV*FDASKL Trigger: AAGTTTGGAAGCATCAAATCAGACTGGCTGGGCTGC...TGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAAAGGGAGAAGCAAGAAGGCTGAGCAGGAAGCCACTGACTTGGTTCTCAAGGCAGCATCTACTTaGTGGACATCAGGGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVKGRSKKAEQEATDLVLKAAST*WTSGGN Trigger: GTTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTT...GAGAACCAAGTCAGTGGCTTCCTGCTCAGCCTTCTTGCTTCTCCCTTTAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGTCTCAAAGTTGTATGTaGTGGAGCACCAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CIMQRCQTTRVLWAGNAVSQSCM*WSTRGS Trigger: GCTTCCTCTGGTGCTCCACCACATACAACTTTGAGA...CACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | TTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCGGTGCGGCCCTCGGTaGTACAGCTGTTGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLFAISHGELLKGEARRRCGPR*YSCCRR Trigger: CCTCCTACAACAGCTGTACCACCGAGGGCCGCACCG...CCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | ACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACAACCCGAGTACTTCTGCATCTTCTTaGGGGTATCTTTCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TITRRAEMHHAAMSDNPSTSASS*GYLSAQ Trigger: TTGTGCTGAAAGATACCCTCAAGAAGATGCAGAAGT...ACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGCTGGTTAACTACATGGGTTGCCACATCTTaGCTTCCGCATGGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATLLNLKSPGEGEGWLTTWVATS*LPHGLD Trigger: ATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCA...TGTAGTTAACCAGCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAACAGGAAGGGGAACTTaGAGTACTCGCCATCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WAQKEATLLNLKSPGEGETGRGT*STRHQR Trigger: ACGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGT...TTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATCCAGAACTTGTCTCCTaGAAAGATGTATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLHRVRRGTITRRAEMHHPELVS*KDVCLL Trigger: AAGAAGACATACATCTTTGCAGGAGACAAGTTCTGG...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAATCAGCCTCCCCATCATaGATTCGAGAAAAGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAQKEATLLNLKSPGEGESASPS*IREKRS Trigger: GCTGCGCTTTTCTCGAATCCATGATGGGGAGGCTGA...TTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAATAATCGGAAGTTCTTaGTGTAGGTGTAGATCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCIMQRCQTTRVLWAGNAIIGSS*CRCRSG Trigger: CCCCGATCTACACCTACACCAAGAACTTCCGATTAT...TGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AATGCAGTGGAGTGGAAAACTGAAAAGGTTGAAGGAAACGAGCGAAGGGCATACTGTGGGCTTGTCACGTaGTGTCACTGTCCGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NAVEWKTEKVEGNERRAYCGLVT*CHCPPN Trigger: ATTTGGCGGACAGTGACACCACGTGACAAGCCCACA...GTATGCCCTTCGCTCGTTTCCTTCAACCTTTTCAGTTTTCCACTCCACTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGTGGCCACATCTGGGTTaGCACATCTTGGCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLFAISHGELLKGEARRWPHLG*HILASA Trigger: TGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCA...CCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGTAGTTGGCCACATCTaGGTTGCCACATCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WAQKEATLLNLKSPGEGEVVGHI*VATSWL Trigger: AAGCCAAGATGTGGCAACCCAGATGTGGCCAACTAC...TTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGTCATCATCGTAGTTaGTTGTGGTCGCACACCACA | + |
|
Preference number: 4 (lower is better) Translates to: WAQKEATLLNLKSPGEGEGHHRS*LWSHTT Trigger: TGTGGTGTGCGACCACAACCAACTACGATGATGACC...TTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AGCCATAAAAAGGTCATAGATGTTGAAGAACCAGAAGAGTGGAGCACCAGGGCAATCCTGTATGTGATCTaGTTCTTGTCCCACTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKKVIDVEEPEEWSTRAILYVI*FLSHLG Trigger: GCCCAAGTGGGACAAGAACCAGATCACATACAGGAT...TGCCCTGGTGCTCCACTCTTCTGGTTCTTCAACATCTATGACCTTTTTATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | TACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCTGCAAAGTTGTATGTGGTaGAGCACCAGAGGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLFAISHGELLKGEARRLQSCMW*STRGSH Trigger: ATGGCTTCCTCTGGTGCTCCACCACATACAACTTTG...CAGCCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR TCA 90 bp | TTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGATCTCACCACGGATCTaGGCGATGCCATCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYLFAISHGELLKGEARRISPRI*AMPSKT Trigger: TGTCTTTGATGGCATCGCTCAGATCCGTGGTGAGAT...CCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGAAAAGGTTGAAGGAAACGAGCGAAGGGCATACAAAAGCAACAGTTAAGGGTTGCAACTCTCCTTaGGGCAGCCATAGAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLKRLKETSEGHTKATVKGCNSP*GSHRKC Trigger: ACACTTTCTATGGCTGCCCCAAGGAGAGTTGCAACC...CTTAACTGTTGCTTTTGTATGCCCTTCGCTCGTTTCCTTCAACCTTTTCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CCA 90 bp | TACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTAAACAAGGCTTCATaGGGGCAGAAGCCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSQHLSLGTKRSHPLKSEVNKAS*GQKPYL Trigger: CAAGTATGGCTTCTGCCCCCATGAAGCCTTGTTTAC...TTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGGCAGAAGCCATACTTaGCATCCTTCTCAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSQHLSLGTKRSHPLKSEGRSHT*HPSQSC Trigger: ACAACTTTGAGAAGGATGGCAAGTATGGCTTCTGCC...TTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGGCATTCCAGGAGTCTaGGATGAGCTTAGGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLYLFAISHGELLKGEGIPGV*DELRET Trigger: GGTTTCCCTAAGCTCATCGCAGACTCCTGGAATGCC...TTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CCA 90 bp | TTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCCCTTGATGTCATCATaGGATAATCGGAAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLFAISHGELLKGEARRPLMSS*DNRKFL Trigger: CAAGAACTTCCGATTATCCCATGATGACATCAAGGG...CCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTTCAGGTATTGCACTaGCAACTCTTTGTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSQHLSLGTKRSHPLKSEVQVLH*QLFVCF Trigger: AAAACAGACAAAGAGTTGGCAGTGCAATACCTGAAC...TTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAACCAGAACTTGTCTCCTaGAAAGATGTATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLYLYLFAISHGELLKGEPELVS*KDVCLL Trigger: AAGAAGACATACATCTTTGCAGGAGACAAGTTCTGG...TTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATAAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAAGCCACTGACTTGGTTCTCCTCCATCCAGTGGAGGAAGTGACTGGGGTCGCACACCACACCTaGCCATCGTTGCGGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQEATDLVLLHPVEEVTGVAHHT*PSLRPA Trigger: CGCCGGCCGCAACGATGGCAAGGTGTGGTGTGCGAC...CCCAGTCACTTCCTCCACTGGATGGAGGAGAACCAAGTCAGTGGCTTCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 90 bp | GGAGGTGCCCTGGAAGCGGAACGGGAACTTGCAGGGCTGTCCATCTaGATTGCCACCCATGGTAAACAAGGCTTCATGGGGGCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGALEAERELAGLSI*IATHGKQGFMGAEA Trigger: GGCTTCTGCCCCCATGAAGCCTTGTTTACCATGGGTGGCAATGCAGATGGACAGCCCTGCAAGTTCCCGTTCCGCTTCCAGGGCACCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | CACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGACATCGCCGGGGAACTaGATGATGGGCGATGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRVRRGTITRRAEMHHAATSPGN*MMGDGA Trigger: TGCACCATCGCCCATCATCAAGTTCCCCGGCGATGT...CGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GATCTGCACAGAGTGAGGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATAGGCTGGTCAGTGGCTaGGGGTATCCTCGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLHRVRRGTITRRAEMHHRLVSG*GYPRSR Trigger: TCTGGAGCGAGGATACCCCAAGCCACTGACCAGCCT...ATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCCTCACTCTGTGCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CCA 90 bp | GTCCCACTTGGGCTTGCGGGGGAAGAAGTTGTAGTTGGCCACATCTaGGTTGCCACATCTTGGCTTCCGCATGGTCTCGATGGTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPLGLAGEEVVVGHI*VATSWLPHGLDGVL Trigger: CAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGCAAGCCCAAGTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTGCTGGGTTGCCACATCTaGGCTTCCGCATGGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HAAMSDNPSPLGRKCSGVLGCHI*ASAWSR Trigger: TCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAG...CACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTGGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTGCTTCACATCCTTTGGCCACATCTGGGTaGCCACATCTTGGCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLVNYRGGQSRQAASHPLATSG*PHLGFR Trigger: GCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAA...AGGATGTGAAGCAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGCCCAGAGGAGGGCTGCATTGCAAATATCCAAGCATCCCCTAGGGTGCTGTATTCCCGACCGTaGAACAGGAAGGGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSPEEGCIANIQASPRVLYSRP*NRKGNL Trigger: CAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAG...CACCCTAGGGGATGCTTGGATATTTGCAATGCAGCCCTCCTCTGGGCTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTGGTTAACTACAGAGGAGGACAGAGCCGCCAGGCTGCTTCACATCCTAAGGGACCTGTGGGCTaGTCACGTGGTGTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLVNYRGGQSRQAASHPKGPVG*SRGVTV Trigger: GACAGTGACACCACGTGACAAGCCCACAGGTCCCTT...AGGATGTGAAGCAGCCTGGCGGCTCTGTCCTCCTCTGTAGTTAACCAGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTAGGCTGGTCAGTGGCTaGGGGTATCCTCGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCSDVRQPESFGQEMQWSRLVSG*GYPRSR Trigger: TCTGGAGCGAGGATACCCCAAGCCACTGACCAGCCT...ACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CCA 90 bp | TCTGGGTTGCCACATCTTGGCTTCCGCATGGTCTCGATGGTGTTCTaGTCAAGGTCACCTGTCTGGGGCAGCCCAAAGAACTTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SGLPHLGFRMVSMVF*SRSPVWGSPKNFCI Trigger: GATGCAGAAGTTCTTTGGGCTGCCCCAGACAGGTGACCTTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 90 bp | GCGGGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTGCCACATCTTaGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAAGGTCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGEEVVVGHIWVATS*LPHGLDGVLVKVTC Trigger: ACAGGTGACCTTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 90 bp | CATCACTGCGACCAGTGTCTGTACAGCTGCTGTATTCCCGACCGTTaGACAGGAAGGGGAACTTGCAGTACTCGCCATCAGCGTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HHCDQCLYSCCIPDR*TGRGTCSTRHQRSH Trigger: ATGGGAACGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAGCTGTACAGACACTGGTCGCAGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 90 bp | ACTTGGGCTTGCGGGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTaGCACATCTTGGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TWACGGRSCSWPHLG*HILASAWSRWCSGQ Trigger: TTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGCAAGCCCAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 90 bp | AGGCCAGAATGTGGCCACCAGCAAGGGACCTGTGGGCTTGTCACGTaGTGTCACTGTCCGCCAAATAAACCGGTCCTTGAAGAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPECGHQQGTCGLVT*CHCPPNKPVLEEED Trigger: ATCTTCTTCTTCAAGGACCGGTTTATTTGGCGGACAGTGACACCACGTGACAAGCCCACAGGTCCCTTGCTGGTGGCCACATTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | ATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCTCACACCTTGCCATCGTaGCGGCCGGCGCTGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILVCHFPWGTVKGRSKKAHTLPS*RPALVQ Trigger: CTGCACCAGCGCCGGCCGCAACGATGGCAAGGTGTG...AGCCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 90 bp | GAGCGATGCCATCAAAGACAATGTCCTGTTTGCAGATCTCCGGAGTaGCAGGTCCCAGTGTTGGTGTGGGGCCAGTACCAGTGTCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ERCHQRQCPVCRSPE*QVPVLVWGQYQCQY Trigger: ATACTGACACTGGTACTGGCCCCACACCAACACTGGGACCTGTCACTCCGGAGATCTGCAAACAGGACATTGTCTTTGATGGCATCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 90 bp | GTCCACGACGGCATCCAGGTTATCAGGGATGGCATTCCAGGAGTCTaGGATGAGCTTAGGGAAACCGGGGTCCATTTTCTTCTTCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHDGIQVIRDGIPGV*DELRETGVHFLLHF Trigger: GAAGTGAAGAAGAAAATGGACCCCGGTTTCCCTAAGCTCATCGCAGACTCCTGGAATGCCATCCCTGATAACCTGGATGCCGTCGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CCA 90 bp | GGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAAGGTCACCTGTCTaGGGCAGCCCAAAGAACTTCTGCATCTTCTTGAGGGTATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRMVSMVFWSRSPV*GSPKNFCIFLRVSF Trigger: GAAAGATACCCTCAAGAAGATGCAGAAGTTCTTTGGGCTGCCCCAGACAGGTGACCTTGACCAGAACACCATCGAGACCATGCGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | AGATGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAAACAGGAAGGGGAACTaGCAGTACTCGCCATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCIMQRCQTTRVLWAGNANRKGN*QYSPSA Trigger: CGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTT...TGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TGCATCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGCAGCTCTCATACTTGTaGCCCAGGAAAGTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CIMQRCQTTRVLWAGNAVQLSYL*PRKVKG Trigger: CCCCTTCACTTTCCTGGGCAACAAGTATGAGAGCTG...CACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TCATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTCATCATCGTAGTTGGTaGTGGTCGCACACCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSDVRQPESFGQEMQWSHHRSW*WSHTTP Trigger: AGGTGTGGTGTGCGACCACAACCAACTACGATGATG...ACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | CATGCAGCGATGTCAGACAACCCGAGTCCTTTGGGCAGGAAATGCAGTGGAGTGCCAAACTTCACGCTCTaGAGACTTTGGTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HAAMSDNPSPLGRKCSGVPNFTL*RLWFSS Trigger: GCTGGAGAACCAAAGTCTCAAGAGCGTGAAGTTTGG...CACTCCACTGCATTTCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS TCA 90 bp | CAGTATCAGCATCGGGGGAGGGCCCATAGAGCTCCTGGATCCCCTTaGTGTCATCATGGGATAATCGGAAGTTCTTGGTGTAGGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QYQHRGRAHRAPGSP*CHHGIIGSSWCRCR Trigger: TCTACACCTACACCAAGAACTTCCGATTATCCCATGATGACATCAAGGGGATCCAGGAGCTCTATGGGCCCTCCCCCGATGCTGATACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 90 bp | ATGTATGTCTTCTTGTTCTTACTCCAGTTAAAGGCAGCATCTACTTaGTGGACATCAGGGGGCAACCCCAGGCTGGTCAGTGGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MYVFLFLLQLKAAST*WTSGGNPRLVSGLG Trigger: CCCCAAGCCACTGACCAGCCTGGGGTTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTTTAACTGGAGTAAGAACAAGAAGACATACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CCA 90 bp | TGCTCCCAGCGTCCAAAGTTGATCATGATGTCAGCCTCCCCATCATaGATTCGAGAAAAGCGCAGCGGAGTGACGTCGCTCCATACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSQRPKLIMMSASPS*IREKRSGVTSLHTF Trigger: AAAAGTATGGAGCGACGTCACTCCGCTGCGCTTTTCTCGAATCCATGATGGGGAGGCTGACATCATGATCAACTTTGGACGCTGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGAAAGGGTGAAACCAGGTGTCTCTGATTTCCACCTTGGCACACCTGTATATGTGATCTGGTTCTaGTCCCACTTGGGCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAERVKPGVSDFHLGTPVYVIWF*SHLGLR Trigger: CCGCAAGCCCAAGTGGGACAAGAACCAGATCACATA...TACAGGTGTGCCAAGGTGGAAATCAGAGACACCTGGTTTCACCCTTTCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAAATGCAGTGGAGTGGAAAACTGGTGTGCAGCGATGAAGATGATAGGAAAGGCAGCATCTACTaGCTGGACATCAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GQEMQWSGKLVCSDEDDRKGSIY*LDIRGQ Trigger: TTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTTT...CCTATCATCTTCATCGCTGCACACCAGTTTTCCACTCCACTGCATTTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | TACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCTGTGGTTCTTGTCCCACTaGGGCTTGCGGGGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLFAISHGELLKGEARRLWFLSH*GLRGKK Trigger: CTTCTTCCCCCGCAAGCCCAAGTGGGACAAGAACCA...CAGCCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACACAAATAAACCGGTCCTaGAAGAAGAAGATCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEPSLGGLRCIMQRCQTQINRS*KKKISP Trigger: TGGTGAGATCTTCTTCTTCAAGGACCGGTTTATTTG...TGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAAATGCAGTGGAGTGGAAAACTGGTGTGCAGCGATGAAGATGATAGGCCCAGCCAGTCTGATTaGATGCTTCCAAACTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GQEMQWSGKLVCSDEDDRPSQSD*MLPNFT Trigger: CGTGAAGTTTGGAAGCATCAAATCAGACTGGCTGGG...CCTATCATCTTCATCGCTGCACACCAGTTTTCCACTCCACTGCATTTCCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGAACCATCACTAGGCGGGCTGAGATGCATCATGCAGCGATGTCAGACATTGTATCTCCAGAACTaGTCTCCTGCAAAGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGEPSLGGLRCIMQRCQTLYLQN*SPAKMY Trigger: ATACATCTTTGCAGGAGACAAGTTCTGGAGATACAA...TGTCTGACATCGCTGCATGATGCATCTCAGCCCGCCTAGTGATGGTTCCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAAAGGTCATAGATGTTGAAGAACCAGAAGAGTGGAGCACCAGGGCAGCCAGGAGTCCATCCTaGCCATCAAATGGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHKKVIDVEEPEEWSTRAARSPS*PSNGYP Trigger: TGGATACCCATTTGATGGCAAGGATGGACTCCTGGC...TGCCCTGGTGCTCCACTCTTCTGGTTCTTCAACATCTATGACCTTTTTATGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAAAAGGTCATAGATGTTGAAGAACCAGAAGAGTGGAGCACCAGGGCAGGCTGTCCATCTGCATaGCCACCCATGGTAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHKKVIDVEEPEEWSTRAGCPSA*PPMVNK Trigger: CTTGTTTACCATGGGTGGCAATGCAGATGGACAGCC...TGCCCTGGTGCTCCACTCTTCTGGTTCTTCAACATCTATGACCTTTTTATGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | GCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAAGGCCCCAGCCAGTCTGATTaGATGCTTCCAAACTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: AQKEATLLNLKSPGEGEGPSQSD*MLPNFT Trigger: CGTGAAGTTTGGAAGCATCAAATCAGACTGGCTGGG...GCCTTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCACAAAAAGAAGCCACCCTCTTAAATCTGAAGTCACCAGGTGAAGGAGAATGCACTGCCAACTCTTaGTCTGTTTTAGGGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: WAQKEATLLNLKSPGEGECTANS*SVLGAT Trigger: TGTCGCCCCTAAAACAGACAAAGAGTTGGCAGTGCA...TTCTCCTTCACCTGGTGACTTCAGATTTAAGAGGGTGGCTTCTTTTTGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | AAACTGAAAAGGTTGAAGGAAACGAGCGAAGGGCATACAAAAGCAACAGTTAAGAAGCGGAACGGGAACTaGCAGGGCTGTCCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLKRLKETSEGHTKATVKKRNGN*QGCPSA Trigger: TGCAGATGGACAGCCCTGCAAGTTCCCGTTCCGCTT...CTTAACTGTTGCTTTTGTATGCCCTTCGCTCGTTTCCTTCAACCTTTTCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | CCGGGAGGGTACAGTCAGCACCTTTCTTTGGGCACAAAAAGAAGCCACCCTCTTTTGTATCTCCAGAACTaGTCTCCTGCAAAGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PGGYSQHLSLGTKRSHPLLYLQN*SPAKMY Trigger: ATACATCTTTGCAGGAGACAAGTTCTGGAGATACAA...AAGAGGGTGGCTTCTTTTTGTGCCCAAAGAAAGGTGCTGACTGTACCCTCCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCTGCCAAACTTCACGCTCTaGAGACTTTGGTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLFAISHGELLKGEARRLPNFTL*RLWFSS Trigger: GCTGGAGAACCAAAGTCTCAAGAGCGTGAAGTTTGG...CAGCCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAGCAAGAAGGCTAAGACAATGTCCTGTTaGCAGATCTCCGGAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ILVCHFPWGTVKGRSKKAKTMSC*QISGVT Trigger: TGTCACTCCGGAGATCTGCAAACAGGACATTGTCTT...AGCCTTCTTGCTTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAAAAGGCAGCATCTACTaGCTGGACATCAGGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLYLYLFAISHGELLKGEKGSIY*LDIRGQ Trigger: TTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTTT...TTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATAAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTATTTATACTTGTTTGCCATTTCCCATGGGGAACTGTTAAAGGGAGAAAACTTCTGCATCTTCTaGAGGGTATCTTTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CLYLYLFAISHGELLKGENFCIF*RVSFST Trigger: TGTGCTGAAAGATACCCTCAAGAAGATGCAGAAGTT...TTCTCCCTTTAACAGTTCCCCATGGGAAATGGCAAACAAGTATAAATAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 72 bp | GGCGACATCGCCGGGGAACTTGATGATGGGCGATGGTaGAGCGATGGCGCGGCCCAACAGGCAGCACAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GDIAGELDDGRW*SDGAAQQAAQD Trigger: GTCCTGTGCTGCCTGTTGGGCCGCGCCATCGCTGCACCATCGCCCATCATCAAGTTCCCCGGCGATGTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | AGGGGCGACATCGCCGGGGAACTTGATGATGGGCGATaGTGCAGCGATGGCGCGGCCCAACAGGCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RGDIAGELDDGR*CSDGAAQQAAQ Trigger: CTGTGCTGCCTGTTGGGCCGCGCCATCGCTGCACCATCGCCCATCATCAAGTTCCCCGGCGATGTCGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | AGAAGCCCCACTTCCGGTCATCATCGTAGTTGGTTGTaGTCGCACACCACACCTTGCCATCGTTGCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPTSGHHRSWL*SHTTPCHRCGR Trigger: CCGGCCGCAACGATGGCAAGGTGTGGTGTGCGACCACAACCAACTACGATGATGACCGGAAGTGGGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | GGCCAGAATGTGGCCACCAGCAAGGGACCTGTGGGCTaGTCACGTGGTGTCACTGTCCGCCAAATAAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: GQNVATSKGPVG*SRGVTVRQINR Trigger: CCGGTTTATTTGGCGGACAGTGACACCACGTGACAAGCCCACAGGTCCCTTGCTGGTGGCCACATTCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | GGGAGCTCAGGCCAGAATGTGGCCACCAGCAAGGGACCTGTGGGCTaGTCACGTGGTGTCACTGTCCGCCAAATAAACCGGTCCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSGQNVATSKGPVG*SRGVTVRQINRSLK Trigger: CTTCAAGGACCGGTTTATTTGGCGGACAGTGACACCACGTGACAAGCCCACAGGTCCCTTGCTGGTGGCCACATTCTGGCCTGAGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | GTGCCCTGGAAGCGGAACGGGAACTTGCAGGGCTGTCCATCTGCATaGCCACCCATGGTAAACAAGGCTTCATGGGGGCAGAAGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: VPWKRNGNLQGCPSA*PPMVNKASWGQKPY Trigger: GTATGGCTTCTGCCCCCATGAAGCCTTGTTTACCATGGGTGGCAATGCAGATGGACAGCCCTGCAAGTTCCCGTTCCGCTTCCAGGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | GACAGAAGCCCCACTTCCGGTCATCATCGTAGTTGGTaGTGGTCGCACACCACACCTTGCCATCGTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: DRSPTSGHHRSW*WSHTTPCHRCG Trigger: GCCGCAACGATGGCAAGGTGTGGTGTGCGACCACAACCAACTACGATGATGACCGGAAGTGGGGCTTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 72 bp | CTGGAAGCGGAACGGGAACTTGCAGGGCTGTCCATCTaGATTGCCACCCATGGTAAACAAGGCTTCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEAERELAGLSI*IATHGKQGFMG Trigger: CCCCATGAAGCCTTGTTTACCATGGGTGGCAATGCAGATGGACAGCCCTGCAAGTTCCCGTTCCGCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | CCACATCTTGGCTTCCGCATGGTCTCGATGGTGTTCTaGTCAAGGTCACCTGTCTGGGGCAGCCCAAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PHLGFRMVSMVF*SRSPVWGSPKN Trigger: GTTCTTTGGGCTGCCCCAGACAGGTGACCTTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | GGGCTTGCGGGGGAAGAAGTTGTAGTTGGCCACATCTaGGTTGCCACATCTTGGCTTCCGCATGGTCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLAGEEVVVGHI*VATSWLPHGLD Trigger: ATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGCAAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | TGTGGCCACCAGCAAGGGACCTGTGGGCTTGTCACGTaGTGTCACTGTCCGCCAAATAAACCGGTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CGHQQGTCGLVT*CHCPPNKPVLE Trigger: TTCAAGGACCGGTTTATTTGGCGGACAGTGACACCACGTGACAAGCCCACAGGTCCCTTGCTGGTGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | TGCGGGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTGCCACATCTaGGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAAGGTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGGRSCSWPHLGCHI*ASAWSRWCSGQGHL Trigger: CAGGTGACCTTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | CCATCACTGCGACCAGTGTCTGTACAGCTGCTGTATTCCCGACCGTaGAACAGGAAGGGGAACTTGCAGTACTCGCCATCAGCGTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSLRPVSVQLLYSRP*NRKGNLQYSPSAFP Trigger: TGGGAACGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAGCTGTACAGACACTGGTCGCAGTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 72 bp | CAGGAAAGTGAAGGGGAAGACACATGGGGCACCTTCTaGATTTCCACCCACAGTGGACATAGCGGTCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QESEGEDTWGTF*ISTHSGHSGLG Trigger: CCCGAGACCGCTATGTCCACTGTGGGTGGAAATTCAGAAGGTGCCCCATGTGTCTTCCCCTTCACTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 72 bp | TGCGGGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTaGCACATCTTGGCTTCCGCATGGTCTCGATGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGGRSCSWPHLG*HILASAWSRWC Trigger: ACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCCCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | CTCGCCATCAGCGTTCCCATACTTTACGCGGACCACTaGTCCTTCTCCCAGGGTCCACAGCTCATCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: LAISVPILYADH*SFSQGPQLIII Trigger: GATGATGATGAGCTGTGGACCCTGGGAGAAGGACAAGTGGTCCGCGTAAAGTATGGGAACGCTGATGGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 72 bp | GACCAGTGTCTGTACAGCTGCTGTATTCCCGACCGTTaGACAGGAAGGGGAACTTGCAGTACTCGCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: DQCLYSCCIPDR*TGRGTCSTRHQ Trigger: CTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAGCTGTACAGACACTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 72 bp | CATCGGGGGAGGGCCCATAGAGCTCCTGGATCCCCTTaGTGTCATCATGGGATAATCGGAAGTTCTTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HRGRAHRAPGSP*CHHGIIGSSWC Trigger: ACACCAAGAACTTCCGATTATCCCATGATGACATCAAGGGGATCCAGGAGCTCTATGGGCCCTCCCCCGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 72 bp | AGTTGTATGTGGTGGAGCACCAGAGGAAGCCATCACTaGGACCAGTGTCTGTACAGCTGCTGTATTCCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SCMWWSTRGSHH*DQCLYSCCIPD Trigger: GTCGGGAATACAGCAGCTGTACAGACACTGGTCGCAGTGATGGCTTCCTCTGGTGCTCCACCACATACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | CGTCCAAAGTTGATCATGATGTCAGCCTCCCCATCATaGATTCGAGAAAAGCGCAGCGGAGTGACGTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPKLIMMSASPS*IREKRSGVTSL Trigger: GAGCGACGTCACTCCGCTGCGCTTTTCTCGAATCCATGATGGGGAGGCTGACATCATGATCAACTTTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | CGACCAGTGTCTGTACAGCTGCTGTATTCCCGACCGTaGAACAGGAAGGGGAACTTGCAGTACTCGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RPVSVQLLYSRP*NRKGNLQYSPS Trigger: TGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAGCTGTACAGACACTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | TCTGTACAGCTGCTGTATTCCCGACCGTTGAACAGGAAGGGGAACTaGCAGTACTCGCCATCAGCGTTCCCATACTTTACGCGGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SVQLLYSRPLNRKGN*QYSPSAFPYFTRTT Trigger: AGTGGTCCGCGTAAAGTATGGGAACGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAGCTGTACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | GAAGTTGTAGTTGGCCACATCTGGGTTGCCACATCTTaGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: EVVVGHIWVATS*LPHGLDGVLVK Trigger: CTTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | CTGCTGTATTCCCGACCGTTGAACAGGAAGGGGAACTaGCAGTACTCGCCATCAGCGTTCCCATACTTTACG | + |
|
Preference number: 6 (lower is better) Translates to: LLYSRPLNRKGN*QYSPSAFPYFT Trigger: CGTAAAGTATGGGAACGCTGATGGCGAGTACTGCAAGTTCCCCTTCCTGTTCAACGGTCGGGAATACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | CTTGCAGTACTCGCCATCAGCGTTCCCATACTTTACGCGGACCACTaGTCCTTCTCCCAGGGTCCACAGCTCATCATCATCAAAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAVLAISVPILYADH*SFSQGPQLIIIKVR Trigger: TCTCACTTTGATGATGATGAGCTGTGGACCCTGGGAGAAGGACAAGTGGTCCGCGTAAAGTATGGGAACGCTGATGGCGAGTACTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 90 bp | TCAAGGTCACCTGTCTGGGGCAGCCCAAAGAACTTCTGCATCTTCTaGAGGGTATCTTTCAGCACAAAGAGGTTGCAACTCTCCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSPVWGSPKNFCIF*RVSFSTKRLQLSLG Trigger: CCCCAAGGAGAGTTGCAACCTCTTTGTGCTGAAAGATACCCTCAAGAAGATGCAGAAGTTCTTTGGGCTGCCCCAGACAGGTGACCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS GCA 72 bp | TTCTTGTTCTTACTCCAGTTAAAGGCAGCATCTACTTaGTGGACATCAGGGGGCAACCCCAGGCTGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FLFLLQLKAAST*WTSGGNPRLVS Trigger: ACTGACCAGCCTGGGGTTGCCCCCTGATGTCCAGCAAGTAGATGCTGCCTTTAACTGGAGTAAGAACAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CCA 72 bp | AGCCATACTTGCCATCCTTCTCAAAGTTGTATGTGGTaGAGCACCAGAGGAAGCCATCACTGCGACCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SHTCHPSQSCMW*STRGSHHCDQC Trigger: ACACTGGTCGCAGTGATGGCTTCCTCTGGTGCTCCACCACATACAACTTTGAGAAGGATGGCAAGTATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | AGAAGCCATACTTGCCATCCTTCTCAAAGTTGTATGTaGTGGAGCACCAGAGGAAGCCATCACTGCGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSHTCHPSQSCM*WSTRGSHHCDQ Trigger: CTGGTCGCAGTGATGGCTTCCTCTGGTGCTCCACCACATACAACTTTGAGAAGGATGGCAAGTATGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CCA 72 bp | CCATCTGCATTGCCACCCATGGTAAACAAGGCTTCATaGGGGCAGAAGCCATACTTGCCATCCTTCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSALPPMVNKAS*GQKPYLPSFSK Trigger: CTTTGAGAAGGATGGCAAGTATGGCTTCTGCCCCCATGAAGCCTTGTTTACCATGGGTGGCAATGCAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS CAA 72 bp | AGAAGTTGTAGTTGGCCACATCTGGGTTGCCACATCTaGGCTTCCGCATGGTCTCGATGGTGTTCTGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSCSWPHLGCHI*ASAWSRWCSGQ Trigger: TTGACCAGAACACCATCGAGACCATGCGGAAGCCAAGATGTGGCAACCCAGATGTGGCCAACTACAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034187.9 |
||
| CDS TCA 72 bp | GACTTTGGTTCTCCAGCTTCAGGTAATAAGCACCCTTaGAGAAGTAGCTATGACCACCACCCTGCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DFGSPASGNKHP*RSSYDHHPAGP Trigger: TGGACCTGCAGGGTGGTGGTCATAGCTACTTCTTCAAGGGTGCTTATTACCTGAAGCTGGAGAACCAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CAA 72 bp | CTCCAGAACTTGTCTCCTGCAAAGATGTATGTCTTCTaGTTCTTACTCCAGTTAAAGGCAGCATCTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQNLSPAKMYVF*FLLQLKAASTC Trigger: GCAAGTAGATGCTGCCTTTAACTGGAGTAAGAACAAGAAGACATACATCTTTGCAGGAGACAAGTTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||
| CDS CAA 90 bp | TCATTGTATCTCCAGAACTTGTCTCCTGCAAAGATGTATGTCTTCTaGTTCTTACTCCAGTTAAAGGCAGCATCTACTTGCTGGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLYLQNLSPAKMYVF*FLLQLKAASTCWTS Trigger: TGATGTCCAGCAAGTAGATGCTGCCTTTAACTGGAGTAAGAACAAGAAGACATACATCTTTGCAGGAGACAAGTTCTGGAGATACAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034187.9 ENSMUST00000211567.2 |
||