Pregenerated sensors for MMP19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025355Ensembl transcript IDs: ENSMUST00000026411.8, ENSMUST00000219404.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAAGTTCCCCGGCTCCTTACTCGGGGGTGATTGGGCTTCTGGTTaGCCTTTCTTCCTGGACCCTACACTCGTGAATCCTGCTACCTCT | + |
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Preference number: 1 (lower is better) Translates to: QKFPGSLLGGDWASG*PFFLDPTLVNPATS Trigger: AGAGGTAGCAGGATTCACGAGTGTAGGGTCCAGGAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR TCA 90 bp | GCCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTaGGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: AFNPSAQEAEAGGYL*VQGSLVYISTQRVS Trigger: TGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCCCCGGCTCCTTACTCGGGGGTGATTGGGCTTCTGGTTGGCCTTTCTTCAAACCCCCTCCTGATTaGCAGTTTCCCTCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: KFPGSLLGGDWASGWPFFKPPPD*QFPSTR Trigger: TCTGGTGGAGGGAAACTGTCAATCAGGAGGGGGTTT...GAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCCCCGGCTCCTTACTCGGGGGTGATTGGGCTTCTGGTTGGCCTTTCTTCCCTCTCTCCAAAAGCTaGCTCCTTGACCTTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KFPGSLLGGDWASGWPFFPLSKS*LLDLFL Trigger: GAGAAAAAGGTCAAGGAGCCAGCTTTTGGAGAGAGG...GAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACTTTTGGCAGGAGGAATaGCACAGAAGTTCCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVSQDRASLCSPGCPATHFWQEE*HRSSPA Trigger: AGCCGGGGAACTTCTGTGCCATTCCTCCTGCCAAAA...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACCCACACATAGTCAGGTaGCTCAAGGACTCCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LVSQDRASLCSPGCPATHPHIVR*LKDSKS Trigger: GGATTTGGAGTCCTTGAGCCACCTGACTATGTGTGG...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGTGGAACCCAGAGCATTGCCCATATTAGACAAGTGTTCTGAACTACAAGGGCTCCATCTTCCATaGTGCTTTCCCCCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AEVEPRALPILDKCSELQGLHLP*CFPPLL Trigger: GAGGAGAGGGGGAAAGCAGCATGGAAGATGGAGCCC...TTGTAGTTCAGAACACTTGTCTAATATGGGCAATGCTCTGGGTTCCACCTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCGAGGAGCCTGGTCTTTaGGGCTGCACTGTAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: CLVRLGFWSLKTGLLCVAEEPGL*GCTVAK Trigger: CTTGGCTACAGTGCAGCCCCAAAGACCAGGCTCCTC...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGTGGAACCCAGAGCATTGCCCATATTAGACAAGTGTTCTGAACTACAACCGGGACTAAAGGCATaGACCACCATACCCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: AEVEPRALPILDKCSELQPGLKA*TTIPSD Trigger: ATCACTGGGTATGGTGGTGCATGCCTTTAGTCCCGG...TTGTAGTTCAGAACACTTGTCTAATATGGGCAATGCTCTGGGTTCCACCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCAAAAGCTGGCTCCTTaGCCTTTTTCTCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CLVRLGFWSLKTGLLCVAQKLAP*PFSQRS Trigger: GCTCCTCTGAGAAAAAGGTCAAGGAGCCAGCTTTTG...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTACAGGAATTGGAGACTaGTTCAGAATTAAGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: RIQYPAVSCFLLSAKAPATGIGD*FRIKWT Trigger: TGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGT...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCTGCACTGTAGCCAAGTaGCTTCTGTCTTTTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: CLVRLGFWSLKTGLLCVACTVAK*LLSFKV Trigger: TACTTTAAAAGACAGAAGGCACTTGGCTACAGTGCA...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAACAGGAATTGGAGACTaGTTCAGAATTAAGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: SVSSRQPGLHIYTESFRITGIGD*FRIKWT Trigger: TGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| 3UTR GCA 72 bp | AGGCTGGCCTTGAACTCACAGGGATCTGCTTGCCTGTaGCTCCCCAGTACCGGGACTAAAGGCATGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: RLALNSQGSACL*LPSTGTKGMHH Trigger: GTGGTGCATGCCTTTAGTCCCGGTACTGGGGAGGCACAGGCAAGCAGATCCCTGTGAGTTCAAGGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR TCA 72 bp | AATGGCACAGAAGTTCCCCGGCTCCTTACTCGGGGGTaGTTGGGCTTCTGGTTGGCCTTTCTTCCTGGACCC | + |
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Preference number: 3 (lower is better) Translates to: NGTEVPRLLTRG*LGFWLAFLPGP Trigger: GGGTCCAGGAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTTCTGTGCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR CCA 72 bp | GCACAGAAGTTCCCCGGCTCCTTACTCGGGGGTGATTaGGCTTCTGGTTGGCCTTTCTTCCTGGACCCTACA | + |
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Preference number: 3 (lower is better) Translates to: AQKFPGSLLGGD*ASGWPFFLDPT Trigger: TGTAGGGTCCAGGAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTTCTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR TCA 72 bp | CCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTaGGTTCAAGGCAGCCTGGTCTACATATCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: PSAQEAEAGGYL*VQGSLVYISTQ Trigger: CTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCCCGGCTCCTTACTCGGGGGTGATTGGGCTTCTGGTTGGCCTTTCTTCGATGCGCCTCTACTGTaGCTGCTTTTTACTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KFPGSLLGGDWASGWPFFDAPLL*LLFTFF Trigger: AAAGAAAGTAAAAAGCAGCAACAGTAGAGGCGCATC...GAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| 3UTR CCA 72 bp | CAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTaGTCTACATATCTACACAGAGAGTTTCAGGATAGC | + |
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Preference number: 3 (lower is better) Translates to: QRQVDICEFKAA*STYLHREFQDS Trigger: GCTATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| 3UTR TCA 72 bp | GGAACCCAGAGCATTGCCCATATTAGACAAGTGTTCTaGACTACAACCCATTCCCAAAAACCTGTTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GTQSIAHIRQVF*TTTHSQKPVLF Trigger: AAACAAAACAGGTTTTTGGGAATGGGTTGTAGTTCAGAACACTTGTCTAATATGGGCAATGCTCTGGGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCTCCTCAGTGGAGGAGGACCACAGCATCTGCCTCAGCTCCCCTCTCTCCGCATGGCCCACTTCATaGGCCGCAATGATGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLSSVEEDHSICLSSPLSAWPTS*AAMMRR Trigger: CCTGCGCATCATTGCGGCCCATGAAGTGGGCCATGC...GGAGAGAGGGGAGCTGAGGCAGATGCTGTGGTCCTCCTCCACTGAGGAGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCTCCTCAGTGGAGGAGGACCACAGCATCTGCCTCAGCTCCCCTCTCTCCCCCTGCCACATCATCTaGATGCAGCTTGAAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PLSSVEEDHSICLSSPLSPCHII*MQLEEG Trigger: CCCTTCTTCAAGCTGCATCCAGATGATGTGGCAGGG...GGAGAGAGGGGAGCTGAGGCAGATGCTGTGGTCCTCCTCCACTGAGGAGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCTCAGTGGAGGAGGACCACAGCATCTGCCTCAGCTCCCCTCTCTCCGCCAGTTCATCCCATTaGCAGTATCCTGAGCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: PLSSVEEDHSICLSSPLSASSSH*QYPEPL Trigger: TAAGGGCTCAGGATACTGGCAATGGGATGAACTGGC...GGAGAGAGGGGAGCTGAGGCAGATGCTGTGGTCCTCCTCCACTGAGGAGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR TCA 90 bp | GCTCCATCTTCCATGCTGCTTTCCCCCTCTCCTCAGTGGAGGAGGACCACAGCAGACTGTGTCTGTGGTTaGAGGAGTAACGTCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: APSSMLLSPSPQWRRTTADCVCG*RSNVPG Trigger: ACCGGGGACGTTACTCCTTCAACCACAGACACAGTC...TGCTGTGGTCCTCCTCCACTGAGGAGAGGGGGAAAGCAGCATGGAAGATGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACGGGCTGCTCGGACTCTaGGAAGTGAGAGGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LVSQDRASLCSPGCPATHGLLGL*EVRGWR Trigger: CCTCCACCCTCTCACTTCCCAGAGTCCGAGCAGCCC...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGGGCTGCTCGGACTCTaGGAAGTGAGAGGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKGLLGL*EVRGWR Trigger: CCTCCACCCTCTCACTTCCCAGAGTCCGAGCAGCCC...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTGAGGCCCCAGCACCATaGCGTCCACCTCACCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAEAPAP*RPPHRC Trigger: GCAGCGGTGAGGTGGACGCCATGGTGCTGGGGCCTC...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR GCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACAGACCACAACGGGGCTaGTTCATACGGGCCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LVSQDRASLCSPGCPATHRPQRG*FIRALV Trigger: CACAAGGGCCCGTATGAAGCAGCCCCGTTGTGGTCT...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGGAGCCATGAGTGCCTaGGTATATCGGGAGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKGAMSA*VYRECP Trigger: TGGGCACTCCCGATATACCCAGGCACTCATGGCTCC...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR TCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACCATAGACAGGAGCCATaGGTGCCTGGGTATATCGGG | + |
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Preference number: 4 (lower is better) Translates to: LVSQDRASLCSPGCPATHHRQEP*VPGYIG Trigger: CCCGATATACCCAGGCACTCATGGCTCCTGTCTATG...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR TCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGCATCTGGATGCAGCTTaGAGAAGGGCTGGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKHLDAA*RRAGSQ Trigger: CTGGCTACCAGCCCTTCTTCAAGCTGCATCCAGATG...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCAAGGGGCCTGGCCCTaGATCTGTTACAGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: RRQRQVDICEFKAAWSTYQGAWP*ICYSPH Trigger: GTGTGGACTGTAACAGATTCAGGGCCAGGCCCCTTG...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR TCA 90 bp | GCTCCATCTTCCATGCTGCTTTCCCCCTCTCCTCAGTGGAGGAGGACCACAGCATGGGCTCTACTCTGTTaGATTTCATGGGAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: APSSMLLSPSPQWRRTTAWALLC*ISWESQ Trigger: CTGGCTTTCCCATGAAATTCAACAGAGTAGAGCCCA...TGCTGTGGTCCTCCTCCACTGAGGAGAGGGGGAAAGCAGCATGGAAGATGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR GCA 90 bp | TTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCCTGGCTGTCCTGCAACTCACTCTCTGGGCTCCTCTTaGCATAGAGAGCCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: LVSQDRASLCSPGCPATHSLGSS*HREPGS Trigger: GGATCCAGGCTCTCTATGGCAAGAGGAGCCCAGAGA...GTGAGTTGCAGGACAGCCAGGGCTACACAAAGAAGCCCTGTCTTGAGAGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTCCAAGTCCTAGGGCATaGCCCACTTCATGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAPSPRA*PTSWAA Trigger: TGCGGCCCATGAAGTGGGCCATGCCCTAGGACTTGG...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR TCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTCAAGGGGCCTGGCCCTaGATCTGTTACAGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAQGAWP*ICYSPH Trigger: GTGTGGACTGTAACAGATTCAGGGCCAGGCCCCTTG...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATTCTCTGGGCTCCTCTTaGCATAGAGAGCCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: RRQRQVDICEFKAAWSTYSLGSS*HREPGS Trigger: GGATCCAGGCTCTCTATGGCAAGAGGAGCCCAGAGA...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGGCCTGAGACTGTCATaGGAAGTAAGAATGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKGLRLS*EVRMPA Trigger: GGCTGGCATTCTTACTTCCCATGACAGTCTCAGGCC...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTTCTGGGATGTCAGCATaGGCCAGGACCTTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPASGMSA*ARTFPG Trigger: GCCTGGAAAGGTCCTGGCCCATGCTGACATCCCAGA...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR GCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGCATGGGACCAGGTTTTaGAGTCACTGGAGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKHGTRF*SHWRHS Trigger: ACTGTGTCTCCAGTGACTGCAAAACCTGGTCCCATG...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCCCATCAAAGGTATTaGAGCAGTACAGGCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PLIPALRRQRQVDICEFKAHQRY*SSTGFG Trigger: GCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGC...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGGTGGAACCCAGAGCATTGCCCATATTAGACAAGTGTTCTGAACTACAACCAAGTCCTAGGGCATaGCCCACTTCATGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AEVEPRALPILDKCSELQPSPRA*PTSWAA Trigger: TGCGGCCCATGAAGTGGGCCATGCCCTAGGACTTGG...TTGTAGTTCAGAACACTTGTCTAATATGGGCAATGCTCTGGGTTCCACCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR TCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTGGGTGGAGGGCACATTaGAGATGCGGAATGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAGWRAH*RCGMSS Trigger: ACTTGACATTCCGCATCTTCAATGTGCCCTCCACCC...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATTTAGTGTCTGGAGTCTaGGAACCACAGTGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRQRQVDICEFKAAWSTYLVSGV*EPQCIQ Trigger: CTGGATGCACTGTGGTTCTCAGACTCCAGACACTAA...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCTCATACGGGCCCTTGTaGCGTCATCCATCTGACCGG | + |
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Preference number: 4 (lower is better) Translates to: CLVRLGFWSLKTGLLCVASYGPL*RHPSDR Trigger: CCGGTCAGATGGATGACGCCACAAGGGCCCGTATGA...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTCAAAGGGCAGATATTTaGAACAAGGGGCCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAQRADI*NKGPGP Trigger: AGGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTG...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTAGCCAGGAGACATCTTaGAATCCACATACCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPASQETS*NPHTAT Trigger: TGTGGCGGTATGTGGATTTCAAGATGTCTCCTGGCT...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATTGGGCTCTACTCTGTTaGATTTCATGGGAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRQRQVDICEFKAAWSTYWALLC*ISWESQ Trigger: CTGGCTTTCCCATGAAATTCAACAGAGTAGAGCCCA...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCGACAGGAGCCATGAGTaGCTGGGTATATCGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLVRLGFWSLKTGLLCVADRSHE*LGISGV Trigger: CACTCCCGATATACCCAGGCACTCATGGCTCCTGTC...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR GCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTGCCAGTTCATCCCATTaGCAGTATCCTGAGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAASSSH*QYPEPL Trigger: TAAGGGCTCAGGATACTGGCAATGGGATGAACTGGC...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGAGAGGCCCCAGCACCATaGCGTCCACCTCACCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLYDKKKQELETDSELSGEAPAP*RPPHRC Trigger: GCAGCGGTGAGGTGGACGCCATGGTGCTGGGGCCTC...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCTCGGACTCTGGGAAGTaGGAGGGTGGAGGGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVSDSGK*EGGGHI Trigger: AATGTGCCCTCCACCCTCTCACTTCCCAGAGTCCGA...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR TCA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGCATCTGGATGCAGCTTaGAGAAGGGCTGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVSSRQPGLHIYTESFRHLDAA*RRAGSQ Trigger: CTGGCTACCAGCCCTTCTTCAAGCTGCATCCAGATG...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGGACTGTGTCTGTGGTTaGAGGAGTAACGTCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSSRQPGLHIYTESFRDCVCG*RSNVPG Trigger: ACCGGGGACGTTACTCCTTCAACCACAGACACAGTC...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAGACAGGAGCCATGAGTaGCTGGGTATATCGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRIDRSHE*LGISGV Trigger: CACTCCCGATATACCCAGGCACTCATGGCTCCTGTC...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAGAGAGCCTGGATCCCTaGCACATCATCTGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRIESLDP*HIIWMQ Trigger: CTGCATCCAGATGATGTGGCAGGGATCCAGGCTCTC...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGGGGTGGAGGGCACATTaGAGATGCGGAATGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSSRQPGLHIYTESFRGWRAH*RCGMSS Trigger: ACTTGACATTCCGCATCTTCAATGTGCCCTCCACCC...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGTCGGACTCTGGGAAGTaGGAGGGTGGAGGGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQSDSGK*EGGGHI Trigger: AATGTGCCCTCCACCCTCTCACTTCCCAGAGTCCGA...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCCTTCATGGGCCGCAATaGTGCGCAGGTTCACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVLHGPQ*CAGSLL Trigger: AAGGAGTGAACCTGCGCATCATTGCGGCCCATGAAG...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCGAGAGCCTGGATCCCTaGCACATCATCTGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVESLDP*HIIWMQ Trigger: CTGCATCCAGATGATGTGGCAGGGATCCAGGCTCTC...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAGGCTTTGGCGGCCATaGAAAGAGAGGCGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRIRLWRP*KERRMS Trigger: TGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCGAGCAGTACAGGCTTTaGCGGCCATGGAAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVEQYRL*RPWKER Trigger: CCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTC...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGTCTGGGATGTCAGCATaGGCCAGGACCTTTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQSGMSA*ARTFPG Trigger: GCCTGGAAAGGTCCTGGCCCATGCTGACATCCCAGA...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCTATACTCCCAAGTTCTaGGATGTCAGCATGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLVRLGFWSLKTGLLCVAYTPKF*DVSMGQ Trigger: CTGGCCCATGCTGACATCCCAGAACTTGGGAGTATA...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGGGAGCCATGAGTGCCTaGGTATATCGGGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQGAMSA*VYRECP Trigger: TGGGCACTCCCGATATACCCAGGCACTCATGGCTCC...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCCATAGACAGGAGCCATaGGTGCCTGGGTATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSHRQEP*VPGYIG Trigger: CCCGATATACCCAGGCACTCATGGCTCCTGTCTATG...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATAATACTCTTTGCCCTTaGAAAAGTAGACTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRQRQVDICEFKAAWSTYNTLCP*KSRLGH Trigger: ATGGCCAAGTCTACTTTTTCAAGGGCAAAGAGTATT...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAGACATTAGCAGAGAATaGGAGGGAGGCAGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRIDISRE*EGGRVC Trigger: ACAGACTCTGCCTCCCTCTCATTCTCTGCTAATGTC...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCCAGGTAATCCAAGACTaGCTCCTTCTCTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVQVIQD*LLLCRP Trigger: GGGCCTACAGAGAAGGAGGCAGTCTTGGATTACCTG...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR GCA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAAGACCACAACGGGGCTaGTTCATACGGGCCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKKKQELETDSELSGHLLRPQRG*FIRALV Trigger: CACAAGGGCCCGTATGAAGCAGCCCCGTTGTGGTCT...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGGGTATATCGGGAGTaGCCAAGTCCTAGGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSWVYRE*PSPRAW Trigger: CCATGCCCTAGGACTTGGGCACTCCCGATATACCCA...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTAGTCCAGATGCTTCCTaGAAAGTTCTTAAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPASPDAS*KVLKAS Trigger: AGAGGCTTTAAGAACTTTCCAGGAAGCATCTGGACT...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | AGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTGTCAGCTAAAGCCCCAGCTTTCTTCTTTCTCCAGTaGCCCAGAAGCAGGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RIQYPAVSCFLLSAKAPAFFFLQ*PRSRYL Trigger: TAAATACCTGCTTCTGGGCCACTGGAGAAAGAAGAA...AGCTGGGGCTTTAGCTGACAGGAGGAAGCAGCTAACAGCTGGGTATTGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAGCCCATCAAAGGTATTaGAGCAGTACAGGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRIAHQRY*SSTGFG Trigger: GCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGC...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGAGCATGGCCCACTTCATaGGCCGCAATGATGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLYDKKKQELETDSELSGAWPTS*AAMMRR Trigger: CCTGCGCATCATTGCGGCCCATGAAGTGGGCCATGC...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGACACCTTGTTTCCCTTaGAGAAATGAGTCCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVSSRQPGLHIYTESFRTPCFP*RNESVV Trigger: CACGACGGACTCATTTCTTCAAGGGAAACAAGGTGT...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAACATGAAGCTAGCCTTTACCTAAACACAAATGTTCCAGAGTCTGTCTTAGTGTCTGGAGTCTaGGAACCACAGTGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQEHEASLYLNTNVPESVLVSGV*EPQCIQ Trigger: CTGGATGCACTGTGGTTCTCAGACTCCAGACACTAA...GACAGACTCTGGAACATTTGTGTTTAGGTAAAGGCTAGCTTCATGTTCCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR GCA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTATGGGTATATCGGGAGTaGCCAAGTCCTAGGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DKKKQELETDSELSGHLLWVYRE*PSPRAW Trigger: CCATGCCCTAGGACTTGGGCACTCCCGATATACCCA...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCAGGCTTTGGCGGCCATaGAAAGAGAGGCGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSRLWRP*KERRMS Trigger: TGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCT...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGAGCAGTACAGGCTTTaGCGGCCATGGAAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKKKQELETDSELSGHLLEQYRL*RPWKER Trigger: CCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTC...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| 3UTR CAA 72 bp | GAGATGCGCCTCTACTGTTGCTGCTTTTTACTTTCTTaGCACCACGAAACAAAGCTAATCTACTCCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EMRLYCCCFLLS*HHETKLIYSPN Trigger: GTTGGGGGAGTAGATTAGCTTTGTTTCGTGGTGCAAAGAAAGTAAAAAGCAGCAACAGTAGAGGCGCATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCCCATTGCCAGTATCCTaGGCCCTTAAACAGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSPLPVS*ALKQEH Trigger: GTGTTCCTGTTTAAGGGCTCAGGATACTGGCAATGG...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGTCTGGGATAGCCCTTTaGCACTCGAAGTTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQSGIAL*HSKLLV Trigger: AACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGA...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTCTGGGATAGCCCTTTaGCACTCGAAGTTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSSGIAL*HSKLLV Trigger: AACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGA...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCTTCTTCTTTCTCCAGTaGCCCAGAAGCAGGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLVRLGFWSLKTGLLCVAFFFLQ*PRSRYL Trigger: TAAATACCTGCTTCTGGGCCACTGGAGAAAGAAGAA...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGTATACTCCCAAGTTCTaGGATGTCAGCATGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQYTPKF*DVSMGQ Trigger: CTGGCCCATGCTGACATCCCAGAACTTGGGAGTATA...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCAGCAGATCTGTAATAAGAGGGAGGAAGAACAAGGAATTTGGGAATAAACAGTTCCTTGATTaGTTTAGGGTAGCGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSSRSVIRGRKNKEFGNKQFLD*FRVAAK Trigger: CTTAGCCGCTACCCTAAACCAATCAAGGAACTGTTT...ATTCCCAAATTCCTTGTTCTTCCTCCCTCTTATTACAGATCTGCTGCTCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGACATTAGCAGAGAATaGGAGGGAGGCAGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKKKQELETDSELSGHLLDISRE*EGGRVC Trigger: ACAGACTCTGCCTCCCTCTCATTCTCTGCTAATGTC...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACCCTGCCACATCATCTaGATGCAGCTTGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLYDKKKQELETDSELSGPCHII*MQLEEG Trigger: CCCTTCTTCAAGCTGCATCCAGATGATGTGGCAGGG...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACAAAGGGCAGATATTTaGAACAAGGGGCCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLYDKKKQELETDSELSGQRADI*NKGPGP Trigger: AGGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTG...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAACACCTTGTTTCCCTTaGAGAAATGAGTCCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKKKQELETDSELSGHLLTPCFP*RNESVV Trigger: CACGACGGACTCATTTCTTCAAGGGAAACAAGGTGT...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGAAGCCAGGAGACATCTTaGAATCCACATACCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLYDKKKQELETDSELSGSQETS*NPHTAT Trigger: TGTGGCGGTATGTGGATTTCAAGATGTCTCCTGGCT...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAATACTCTTTGCCCTTaGAAAAGTAGACTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRQPGLHIYTESFRINTLCP*KSRLGH Trigger: ATGGCCAAGTCTACTTTTTCAAGGGCAAAGAGTATT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGTTAGATTGGGGTTTTGGTCTCTCAAGACAGGGCTTCTTTGTGTAGCCTATTTAAGAGATTTCTaGTTGAAGGGATCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLVRLGFWSLKTGLLCVAYLRDF*LKGSSR Trigger: TCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATA...GGCTACACAAAGAAGCCCTGTCTTGAGAGACCAAAACCCCAATCTAACCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCAAACAGTTCCTTGATTaGTTTAGGGTAGCGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLHFMLEEFNTQLLAASSKQFLD*FRVAAK Trigger: CTTAGCCGCTACCCTAAACCAATCAAGGAACTGTTT...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CCA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGTATTTAAGAGATTTCTaGTTGAAGGGATCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQELETDSELSGHLLGTQYLRDF*LKGSSR Trigger: TCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATA...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| 3UTR CAA 72 bp | CACTTGAAACAGCTATATGACAAGAAGAAACAGGAATaGGAGACTGATTCAGAATTAAGTGGACACCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLKQLYDKKKQE*ETDSELSGHLL Trigger: TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTGTTTCAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS TCA 90 bp | GGGAGTGCCCAAGTCCTAGGGCATGGCCCACTTCATGGGCCGCAATaGTGCGCAGGTTCACTCCTTGATAGGTCCCCTCAGTCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSAQVLGHGPLHGPQ*CAGSLLDRSPQSRV Trigger: AACTCTGGACTGAGGGGACCTATCAAGGAGTGAACCTGCGCATCATTGCGGCCCATGAAGTGGGCCATGCCCTAGGACTTGGGCACTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | AGGGATCCTCCAGACCACAACGGGGCTGCTTCATACGGGCCCTTGTaGCGTCATCCATCTGACCGGAAATGGGCAGTCCAGATGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RDPPDHNGAASYGPL*RHPSDRKWAVQMLP Trigger: AGGAAGCATCTGGACTGCCCATTTCCGGTCAGATGGATGACGCCACAAGGGCCCGTATGAAGCAGCCCCGTTGTGGTCTGGAGGATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCTCCTCAGTGGAGGAGGACCACAGCATCTGCCTCAGCTCCCCTCTCTCCAAGCCAGGAGACATCTaGAAATCCACATACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSVEEDHSICLSSPLSKPGDI*KSTYRH Trigger: GTGGCGGTATGTGGATTTCAAGATGTCTCCTGGCTT...GGAGAGAGGGGAGCTGAGGCAGATGCTGTGGTCCTCCTCCACTGAGGAGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS TCA 90 bp | AGGGGCCTGGCCCTGAATCTGTTACAGTCCACACATAGTCGCCCTTaGAAGCATAAGTCTTCCCACGAGGCCCCAGCACCATGGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLALNLLQSTHSRP*KHKSSHEAPAPWRP Trigger: TGGACGCCATGGTGCTGGGGCCTCGTGGGAAGACTTATGCTTTCAAGGGCGACTATGTGTGGACTGTAACAGATTCAGGGCCAGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | CCAGGCCCATCAAAGGTATTGGAGCAGTACAGGCTTTGGCGGCCATaGAAAGAGAGGCGAATGTCAGCCCAACCAGCTTTCACCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPSKVLEQYRLWRP*KERRMSAQPAFTSR Trigger: CCGGGAGGTGAAAGCTGGTTGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCATCTTCCATGCTGCTTTCCCCCTCTCCTCAGTGGAGGAGGACCACAGCACCAGTACTTAAAGGCTaGATGCAGGGCTGCTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: APSSMLLSPSPQWRRTTAPVLKG*MQGCSD Trigger: GTCCGAGCAGCCCTGCATCAAGCCTTTAAGTACTGG...TGCTGTGGTCCTCCTCCACTGAGGAGAGGGGGAAAGCAGCATGGAAGATGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTCCCCGGCTCCTTACTCGGGGGTGATTGGGCTTCTGGTTGGCCTTTCTTCGCGCAGGTTCACTCCTaGATAGGTCCCCTCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KFPGSLLGGDWASGWPFFAQVHS*IGPLSP Trigger: TGGACTGAGGGGACCTATCAAGGAGTGAACCTGCGC...GAAGAAAGGCCAACCAGAAGCCCAATCACCCCCGAGTAAGGAGCCGGGGAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCTCCTCAGTGGAGGAGGACCACAGCATCTGCCTCAGCTCCCCTCTCTCCTTAAGAGATTTCTGGTaGAAGGGATCCTCCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSSVEEDHSICLSSPLSLRDFW*KGSSRP Trigger: TGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAA...GGAGAGAGGGGAGCTGAGGCAGATGCTGTGGTCCTCCTCCACTGAGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS GCA 90 bp | ATCTCTTGTCTCTGGGCTCCTCTTGCCATAGAGAGCCTGGATCCCTaGCACATCATCTGGATGCAGCTTGAAGAAGGGCTGGTAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISCLWAPLAIESLDP*HIIWMQLEEGLVAS Trigger: GCTGGCTACCAGCCCTTCTTCAAGCTGCATCCAGATGATGTGGCAGGGATCCAGGCTCTCTATGGCAAGAGGAGCCCAGAGACAAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | GGATGTCAGCATGGGCCAGGACCTTTCCAGGCCCATCAAAGGTATTaGAGCAGTACAGGCTTTGGCGGCCATGGAAAGAGAGGCGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GCQHGPGPFQAHQRY*SSTGFGGHGKRGEC Trigger: ACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGGAAAGGTCCTGGCCCATGCTGACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS TCA 90 bp | CCACAACGGGGCTGCTTCATACGGGCCCTTGTGGCGTCATCCATCTaGCCGGAAATGGGCAGTCCAGATGCTTCCTGGAAAGTTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PQRGCFIRALVASSI*PEMGSPDASWKVLK Trigger: TTTAAGAACTTTCCAGGAAGCATCTGGACTGCCCATTTCCGGTCAGATGGATGACGCCACAAGGGCCCGTATGAAGCAGCCCCGTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS CCA 90 bp | AGGACCTTTCCAGGCCCATCAAAGGTATTGGAGCAGTACAGGCTTTaGCGGCCATGGAAAGAGAGGCGAATGTCAGCCCAACCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTFPGPSKVLEQYRL*RPWKERRMSAQPAF Trigger: GAAAGCTGGTTGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGGAAAGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | GTAGACTTGGCCATCTTGCCAGCTCATAGCTGCCGAGGGTCGGTCTaGCACTCCAGTAAACAGTTCCTTGATTGGTTTAGGGTAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDLAILPAHSCRGSV*HSSKQFLDWFRVAA Trigger: AGCCGCTACCCTAAACCAATCAAGGAACTGTTTACTGGAGTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS TCA 90 bp | AAGCCCCTCCCAAAGGGCAGATATTTGGAACAAGGGGCCTGGCCCTaGATCTGTTACAGTCCACACATAGTCGCCCTTGAAAGCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KPLPKGRYLEQGAWP*ICYSPHIVALESIS Trigger: ACTTATGCTTTCAAGGGCGACTATGTGTGGACTGTAACAGATTCAGGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTGGGAGGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS GCA 90 bp | TTTGCCCTTGAAAAAGTAGACTTGGCCATCTTGCCAGCTCATAGCTaGCGAGGGTCGGTCTGGCACTCCAGTAAACAGTTCCTTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: FALEKVDLAILPAHS*RGSVWHSSKQFLDW Trigger: CCAATCAAGGAACTGTTTACTGGAGTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTACTTTTTCAAGGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATAGAGCTGCATCCAGGTaGGGCTCTACTCTGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRQRQVDICEFKAAWSTYRAASR*GSTLLN Trigger: ATTCAACAGAGTAGAGCCCAACCTGGATGCAGCTCT...ATATGTAGACCAGGCTGCCTTGAACTCACAGATATCCACCTGCCTCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS TCA 90 bp | GCGGCTAAGGTCAGTTCTGGCCAGTTCATCCCATTGCCAGTATCCTaGGCCCTTAAACAGGAACACCTTTTGATTAACAGGCCAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAKVSSGQFIPLPVS*ALKQEHLLINRPVE Trigger: CTCTACTGGCCTGTTAATCAAAAGGTGTTCCTGTTTAAGGGCTCAGGATACTGGCAATGGGATGAACTGGCCAGAACTGACCTTAGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS GCA 90 bp | AGAACCACAGTGCATCCAGTGTGTCGTATTTCTGGGATAGCCCTTTaGCACTCGAAGTTGCTGGTTAAGGCGCCAATACTCTTTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTTVHPVCRISGIAL*HSKLLVKAPILFAL Trigger: AAGGGCAAAGAGTATTGGCGCCTTAACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGAAATACGACACACTGGATGCACTGTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | TTCTTCTTTCTCCAGTGGCCCAGAAGCAGGTATTTAAGAGATTTCTaGTTGAAGGGATCCTCCAGACCACAACGGGGCTGCTTCATACGG | + |
|
Preference number: 5 (lower is better) Translates to: FFFLQWPRSRYLRDF*LKGSSRPQRGCFIR Trigger: CCGTATGAAGCAGCCCCGTTGTGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATACCTGCTTCTGGGCCACTGGAGAAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGGGAGCAGTACAGGCTTaGGCGGCCATGGAAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISVSSRQPGLHIYTESFRGAVQA*AAMERE Trigger: CTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCC...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATACCAAAGGGCAGATATTaGGAACAAGGGGCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIPKGRY*EQGAWP Trigger: GGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTGG...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGCCAAAGGGCAGATATTaGGAACAAGGGGCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSSRQPGLHIYTESFRPKGRY*EQGAWP Trigger: GGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTGG...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS CCA 90 bp | CTCAGTCCAGAGTTCATCTTTATCAAAGTGTATACTCCCAAGTTCTaGGATGTCAGCATGGGCCAGGACCTTTCCAGGCCCATCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPEFIFIKVYTPKF*DVSMGQDLSRPIKG Trigger: ACCTTTGATGGGCCTGGAAAGGTCCTGGCCCATGCTGACATCCCAGAACTTGGGAGTATACACTTTGATAAAGATGAACTCTGGACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATACTTCCTCCTCATCTCTaGTCTCTGGGCTCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRILPPHL*SLGSSC Trigger: GCAAGAGGAGCCCAGAGACAAGAGATGAGGAGGAAG...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATCCCAGCGCTCAGGAGGCAGAGGCAGGTGGATATCTGTGAGTTCAAGAAACAGGAACACCTTTaGATTAACAGGCCAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLIPALRRQRQVDICEFKKQEHL*INRPVE Trigger: CTCTACTGGCCTGTTAATCAAAAGGTGTTCCTGTTT...CTTGAACTCACAGATATCCACCTGCCTCTGCCTCCTGAGCGCTGGGATTAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAGGTGGAACCCAGAGCATTGCCCATATTAGACAAGTGTTCTGAACTACAAAGGGAATGTCCAAGGTaGAGCCCATGGTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEVEPRALPILDKCSELQRECPR*SPWLME Trigger: CTCCATCAACCATGGGCTCAACCTTGGACATTCCCT...TTGTAGTTCAGAACACTTGTCTAATATGGGCAATGCTCTGGGTTCCACCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAGGGTGGAGGGCACATaGAAGATGCGGAATGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIRVEGT*KMRNVK Trigger: CTTGACATTCCGCATCTTCAATGTGCCCTCCACCCT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGTTCTGGGATAGCCCTTaGCCACTCGAAGTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISVSSRQPGLHIYTESFRFWDSP*PLEVAG Trigger: ACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGAA...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGAGGTTGAGCCCATGGTaGATGGAGTGGTACCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISVSSRQPGLHIYTESFRRLSPW*MEWYPR Trigger: TCTTGGGTACCACTCCATCAACCATGGGCTCAACCT...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAGGGAATGTCCAAGGTaGAGCCCATGGTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIRECPR*SPWLME Trigger: CTCCATCAACCATGGGCTCAACCTTGGACATTCCCT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGCGCAGGTTCACTCCTaGATAGGTCCCCTCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DKKKQELETDSELSGHLLAQVHS*IGPLSP Trigger: TGGACTGAGGGGACCTATCAAGGAGTGAACCTGCGC...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGCTTCCTCCTCATCTCTaGTCTCTGGGCTCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQELETDSELSGHLLGTQLPPHL*SLGSSC Trigger: GCAAGAGGAGCCCAGAGACAAGAGATGAGGAGGAAG...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAAGCCAGGAGACATCTaGAAATCCACATACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIKPGDI*KSTYRH Trigger: GTGGCGGTATGTGGATTTCAAGATGTCTCCTGGCTT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAGAGCTGCATCCAGGTaGGGCTCTACTCTGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIRAASR*GSTLLN Trigger: ATTCAACAGAGTAGAGCCCAACCTGGATGCAGCTCT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAGGAACACAGAGGGTGGAGGGCACATaGAAGATGCGGAATGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQELETDSELSGHLLGTQRVEGT*KMRNVK Trigger: CTTGACATTCCGCATCTTCAATGTGCCCTCCACCCT...CTGTGTTCCTAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTATATGACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGAGGAGCAGTACAGGCTTaGGCGGCCATGGAAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLYDKKKQELETDSELSGGAVQA*AAMERE Trigger: CTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCC...TCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTCATATAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CAA 90 bp | ATATCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGCTTGAAAAAGTAGACTaGGCCATCTTGCCAGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ISVSSRQPGLHIYTESFRLEKVD*AILPAH Trigger: ATGAGCTGGCAAGATGGCCAAGTCTACTTTTTCAAG...CCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CAA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTATTCTGGGATAGCCCTTaGCCACTCGAAGTTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DKKKQELETDSELSGHLLFWDSP*PLEVAG Trigger: ACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGAA...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CAA 90 bp | GACAAGAAGAAACAGGAATTGGAGACTGATTCAGAATTAAGTGGACACCTTCTAAGGTTGAGCCCATGGTaGATGGAGTGGTACCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: DKKKQELETDSELSGHLLRLSPW*MEWYPR Trigger: TCTTGGGTACCACTCCATCAACCATGGGCTCAACCT...TAGAAGGTGTCCACTTAATTCTGAATCAGTCTCCAATTCCTGTTTCTTCTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGAGTTCAAGGCAGCCTGGTCTACATATCTACACAGAGAGTTTCAGGATAAAACAGGAACACCTTTaGATTAACAGGCCAGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: SVSSRQPGLHIYTESFRIKQEHL*INRPVE Trigger: CTCTACTGGCCTGTTAATCAAAAGGTGTTCCTGTTT...TATCCTGAAACTCTCTGTGTAGATATGTAGACCAGGCTGCCTTGAACTCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGCACTTTATGTTGGAAGAATTCAATACCCAGCTGTTAGCTGCTTCCTCCTTAAGAGATTTCTGGTaGAAGGGATCCTCCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: FLHFMLEEFNTQLLAASSLRDFW*KGSSRP Trigger: TGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAA...GGAGGAAGCAGCTAACAGCTGGGTATTGAATTCTTCCAACATAAAGTGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | CCAGACCACAACGGGGCTGCTTCATACGGGCCCTTGTaGCGTCATCCATCTGACCGGAAATGGGCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PDHNGAASYGPL*RHPSDRKWAVQ Trigger: CTGGACTGCCCATTTCCGGTCAGATGGATGACGCCACAAGGGCCCGTATGAAGCAGCCCCGTTGTGGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS TCA 72 bp | CAAGTCCTAGGGCATGGCCCACTTCATGGGCCGCAATaGTGCGCAGGTTCACTCCTTGATAGGTCCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QVLGHGPLHGPQ*CAGSLLDRSPQ Trigger: CTGAGGGGACCTATCAAGGAGTGAACCTGCGCATCATTGCGGCCCATGAAGTGGGCCATGCCCTAGGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | GGCTGCTTCATACGGGCCCTTGTGGCGTCATCCATCTaGCCGGAAATGGGCAGTCCAGATGCTTCCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GCFIRALVASSI*PEMGSPDASWK Trigger: TTTCCAGGAAGCATCTGGACTGCCCATTTCCGGTCAGATGGATGACGCCACAAGGGCCCGTATGAAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS CCA 72 bp | CCAGGCCCATCAAAGGTATTGGAGCAGTACAGGCTTTaGCGGCCATGGAAAGAGAGGCGAATGTCAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: PGPSKVLEQYRL*RPWKERRMSAQ Trigger: TTGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | CATGGGCCAGGACCTTTCCAGGCCCATCAAAGGTATTaGAGCAGTACAGGCTTTGGCGGCCATGGAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HGPGPFQAHQRY*SSTGFGGHGKR Trigger: TCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGGAAAGGTCCTGGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | TCCAGGCCCATCAAAGGTATTGGAGCAGTACAGGCTTaGGCGGCCATGGAAAGAGAGGCGAATGTCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRPIKGIGAVQA*AAMEREANVSP Trigger: TGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | CAGGACCTTTCCAGGCCCATCAAAGGTATTGGAGCAGTACAGGCTTaGGCGGCCATGGAAAGAGAGGCGAATGTCAGCCCAACCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QDLSRPIKGIGAVQA*AAMEREANVSPTSF Trigger: AAAGCTGGTTGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGATGGGCCTGGAAAGGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | GCCCTGAATCTGTTACAGTCCACACATAGTCGCCCTTaGAAGCATAAGTCTTCCCACGAGGCCCCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: ALNLLQSTHSRP*KHKSSHEAPAP Trigger: TGGTGCTGGGGCCTCGTGGGAAGACTTATGCTTTCAAGGGCGACTATGTGTGGACTGTAACAGATTCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | CTCCAGTGGCCCAGAAGCAGGTATTTAAGAGATTTCTaGTTGAAGGGATCCTCCAGACCACAACGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQWPRSRYLRDF*LKGSSRPQRGC Trigger: GCAGCCCCGTTGTGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATACCTGCTTCTGGGCCACTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | CTTGCCATAGAGAGCCTGGATCCCTGCCACATCATCTaGATGCAGCTTGAAGAAGGGCTGGTAGCCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: LAIESLDPCHII*MQLEEGLVASI Trigger: TATGCTGGCTACCAGCCCTTCTTCAAGCTGCATCCAGATGATGTGGCAGGGATCCAGGCTCTCTATGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | GGGTCGGTCTGGCACTCCAGTAAACAGTTCCTTGATTaGTTTAGGGTAGCGGCTAAGGTCAGTTCTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSVWHSSKQFLD*FRVAAKVSSGQ Trigger: CTGGCCAGAACTGACCTTAGCCGCTACCCTAAACCAATCAAGGAACTGTTTACTGGAGTGCCAGACCGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | GCCATCTTGCCAGCTCATAGCTGCCGAGGGTCGGTCTaGCACTCCAGTAAACAGTTCCTTGATTGGTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: AILPAHSCRGSV*HSSKQFLDWFR Trigger: CCTAAACCAATCAAGGAACTGTTTACTGGAGTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | TTGCTGGTTAAGGCGCCAATACTCTTTGCCCTTGAAAAAGTAGACTaGGCCATCTTGCCAGCTCATAGCTGCCGAGGGTCGGTCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLVKAPILFALEKVD*AILPAHSCRGSVWH Trigger: GTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTACTTTTTCAAGGGCAAAGAGTATTGGCGCCTTAACCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | GCATGGGACCAGGTTTTGCAGTCACTGGAGACACAGTaGGCATCTCGGTCTCTTCCTCCTCATCTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: AWDQVLQSLETQ*ASRSLPPHLLS Trigger: AGACAAGAGATGAGGAGGAAGAGACCGAGATGCTCACTGTGTCTCCAGTGACTGCAAAACCTGGTCCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS GCA 72 bp | GAAAAAGTAGACTTGGCCATCTTGCCAGCTCATAGCTaGCGAGGGTCGGTCTGGCACTCCAGTAAACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: EKVDLAILPAHS*RGSVWHSSKQF Trigger: GAACTGTTTACTGGAGTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTACTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | TACGGGCCCTTGTGGCGTCATCCATCTGACCGGAAATaGGCAGTCCAGATGCTTCCTGGAAAGTTCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: YGPLWRHPSDRK*AVQMLPGKFLK Trigger: CTTTAAGAACTTTCCAGGAAGCATCTGGACTGCCCATTTCCGGTCAGATGGATGACGCCACAAGGGCCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026411.8 |
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| CDS CCA 72 bp | TCAAAGGTATTGGAGCAGTACAGGCTTTGGCGGCCATaGAAAGAGAGGCGAATGTCAGCCCAACCAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SKVLEQYRLWRP*KERRMSAQPAF Trigger: GAAAGCTGGTTGGGCTGACATTCGCCTCTCTTTCCATGGCCGCCAAAGCCTGTACTGCTCCAATACCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | CAGTGGCCCAGAAGCAGGTATTTAAGAGATTTCTGGTaGAAGGGATCCTCCAGACCACAACGGGGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QWPRSRYLRDFW*KGSSRPQRGCF Trigger: GAAGCAGCCCCGTTGTGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATACCTGCTTCTGGGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | AAGGCGCCAATACTCTTTGCCCTTGAAAAAGTAGACTaGGCCATCTTGCCAGCTCATAGCTGCCGAGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: KAPILFALEKVD*AILPAHSCRGS Trigger: CGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTACTTTTTCAAGGGCAAAGAGTATTGGCGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | TTCTTTCTCCAGTGGCCCAGAAGCAGGTATTTAAGAGATTTCTGGTaGAAGGGATCCTCCAGACCACAACGGGGCTGCTTCATACGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FFLQWPRSRYLRDFW*KGSSRPQRGCFIRA Trigger: GGCCCGTATGAAGCAGCCCCGTTGTGGTCTGGAGGATCCCTTCAACCAGAAATCTCTTAAATACCTGCTTCTGGGCCACTGGAGAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | AAGGCGCCAATACTCTTTGCCCTTGAAAAAGTAGACTTGGCCATCTaGCCAGCTCATAGCTGCCGAGGGTCGGTCTGGCACTCCAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: KAPILFALEKVDLAI*PAHSCRGSVWHSSK Trigger: TTTACTGGAGTGCCAGACCGACCCTCGGCAGCTATGAGCTGGCAAGATGGCCAAGTCTACTTTTTCAAGGGCAAAGAGTATTGGCGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | GGCATGGCCCACTTCATGGGCCGCAATGATGCGCAGGTTCACTCCTaGATAGGTCCCCTCAGTCCAGAGTTCATCTTTATCAAAGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: GMAHFMGRNDAQVHS*IGPLSPEFIFIKVY Trigger: ATACACTTTGATAAAGATGAACTCTGGACTGAGGGGACCTATCAAGGAGTGAACCTGCGCATCATTGCGGCCCATGAAGTGGGCCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | CCAAAGGGCAGATATTTGGAACAAGGGGCCTGGCCCTaGATCTGTTACAGTCCACACATAGTCGCCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PKGRYLEQGAWP*ICYSPHIVALE Trigger: TTCAAGGGCGACTATGTGTGGACTGTAACAGATTCAGGGCCAGGCCCCTTGTTCCAAATATCTGCCCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | CACTTCATGGGCCGCAATGATGCGCAGGTTCACTCCTaGATAGGTCCCCTCAGTCCAGAGTTCATCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: HFMGRNDAQVHS*IGPLSPEFIFI Trigger: GATAAAGATGAACTCTGGACTGAGGGGACCTATCAAGGAGTGAACCTGCGCATCATTGCGGCCCATGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | GTAACGTCCCCGGTTGATGAGTTAGTGTCTGGAGTCTaGGAACCACAGTGCATCCAGTGTGTCGTATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VTSPVDELVSGV*EPQCIQCVVFL Trigger: CAGAAATACGACACACTGGATGCACTGTGGTTCTCAGACTCCAGACACTAACTCATCAACCGGGGACGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CCA 72 bp | TCAAAGTGTATACTCCCAAGTTCTGGGATGTCAGCATaGGCCAGGACCTTTCCAGGCCCATCAAAGGTATTG | + |
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Preference number: 6 (lower is better) Translates to: SKCILPSSGMSA*ARTFPGPSKVL Trigger: CAATACCTTTGATGGGCCTGGAAAGGTCCTGGCCCATGCTGACATCCCAGAACTTGGGAGTATACACTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | TGTCGTATTTCTGGGATAGCCCTTTGCCACTCGAAGTaGCTGGTTAAGGCGCCAATACTCTTTGCCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: CRISGIALCHSK*LVKAPILFALE Trigger: TTCAAGGGCAAAGAGTATTGGCGCCTTAACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGAAATACGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 90 bp | CATCCAGTGTGTCGTATTTCTGGGATAGCCCTTTGCCACTCGAAGTaGCTGGTTAAGGCGCCAATACTCTTTGCCCTTGAAAAAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: HPVCRISGIALCHSK*LVKAPILFALEKVD Trigger: GTCTACTTTTTCAAGGGCAAAGAGTATTGGCGCCTTAACCAGCAACTTCGAGTGGCAAAGGGCTATCCCAGAAATACGACACACTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS TCA 72 bp | GTCAGTTCTGGCCAGTTCATCCCATTGCCAGTATCCTaGGCCCTTAAACAGGAACACCTTTTGATTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: VSSGQFIPLPVS*ALKQEHLLINR Trigger: CCTGTTAATCAAAAGGTGTTCCTGTTTAAGGGCTCAGGATACTGGCAATGGGATGAACTGGCCAGAACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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| CDS CAA 72 bp | ACTCTGTTGAATTTCATGGGAAAGCCAGGAGACATCTaGAAATCCACATACCGCCACACCTTGTTTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLLNFMGKPGDI*KSTYRHTLFPL Trigger: CAAGGGAAACAAGGTGTGGCGGTATGTGGATTTCAAGATGTCTCCTGGCTTTCCCATGAAATTCAACAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026411.8 ENSMUST00000219404.2 |
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