Pregenerated sensors for MMP17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029436Ensembl transcript IDs: ENSMUST00000031390.10
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGGGGGTTGGGAGGAGGCTCTTGCTGGGACAGCCCTGGAAGATaGTGCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: PWGLGGGSCWDSPGR*CQCPGSPASCGLTL Trigger: GAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGCAGCATCTTCCAGGGCTGTCCCAGCAAGAGCCTCCTCCCAACCCCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | GGCCCTGTCCAGTTGCAGAGCACAACCCGGCAGGAGCCCATGCATTaGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: GPVQLQSTTRQEPMH*HLRALLSLGDPWLQ Trigger: CTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | AGAGCACAACCCGGCAGGAGCCCATGCATTGGCACCTACGTGCTCTaGTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAAAGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RAQPGRSPCIGTYVL*SPWETPGCRNGKGQ Trigger: CTGCCCCTTTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGGTTGTGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | ACGTGCAGATGCCATCAGAGCCGCTCAGGTGCAGACAAGGCATCCTaGGGTTGTGACAGCTGGGCTTGGGCAGCCCGGCAAGGTGCAACG | + |
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Preference number: 1 (lower is better) Translates to: TCRCHQSRSGADKAS*GCDSWAWAARQGAT Trigger: CGTTGCACCTTGCCGGGCTGCCCAAGCCCAGCTGTCACAACCCCAGGATGCCTTGTCTGCACCTGAGCGGCTCTGATGGCATCTGCACGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | AGGAGCGAGGGACCGGAAGCTTGGAGCACAAGTCCTGCTGAGTACTaGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RSEGPEAWSTSPAEY*PVCPCSPWLLDPQG Trigger: GCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACTCAGCAGGACTTGTGCTCCAAGCTTCCGGTCCCTCGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CCCTTGGTGGGACGTCCTGTCCCAGCTGGAGACCACTCCAGCAGATaGCACAGCACCCCTGGGTTCAAGGAAGGAAGGAAGGAAGGAGCG | + |
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Preference number: 1 (lower is better) Translates to: PLVGRPVPAGDHSSR*HSTPGFKEGRKEGA Trigger: CGCTCCTTCCTTCCTTCCTTCCTTGAACCCAGGGGTGCTGTGCCATCTGCTGGAGTGGTCTCCAGCTGGGACAGGACGTCCCACCAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CGCTCAGGTGCAGACAAGGCATCCTGGGGTTGTGACAGCTGGGCTTaGGCAGCCCGGCAAGGTGCAACGAAGCAGCATGATGTGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RSGADKASWGCDSWA*AARQGATKQHDVQR Trigger: CCTCTGCACATCATGCTGCTTCGTTGCACCTTGCCGGGCTGCCCAAGCCCAGCTGTCACAACCCCAGGATGCCTTGTCTGCACCTGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | AAACAGGCATGGTGGCCCCTACGGATACCACGAGGAACCCCTGTTTaGCCCTCATCAGCCCACGTGCAGATGCCATCAGAGCCGCTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: KQAWWPLRIPRGTPV*PSSAHVQMPSEPLR Trigger: CCTGAGCGGCTCTGATGGCATCTGCACGTGGGCTGATGAGGGGCAAACAGGGGTTCCTCGTGGTATCCGTAGGGGCCACCATGCCTGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | GCAGATACGGCGCTGGCTGCTGCAAACGGCAGTGGATCAGACTTCTaGGTAGGTGCCTTTCTCCCACCCTGTTCCCCCATCGGGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: ADTALAAANGSGSDF*VGAFLPPCSPIGAS Trigger: TGATGCCCCGATGGGGGAACAGGGTGGGAGAAAGGCACCTACCCAGAAGTCTGATCCACTGCCGTTTGCAGCAGCCAGCGCCGTATCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | GGGAAACCTCAGATGCCCCTACCCCTGACTCTGTCCTGCCTAGTCTaGCAGGTGGGTCTAGGGTGTGGCCAGGCTTGGGAAATGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GKPQMPLPLTLSCLV*QVGLGCGQAWEMEG Trigger: ACCCTCCATTTCCCAAGCCTGGCCACACCCTAGACCCACCTGTCAGACTAGGCAGGACAGAGTCAGGGGTAGGGGCATCTGAGGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CAACGAAGCAGCATGATGTGCAGAGGAGGGAAGGGGAGCTGCCTATaGCTGCTCCAGGTAGGCAAGGTGTGCATGGATGCCCTTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: QRSSMMCRGGKGSCL*LLQVGKVCMDALGG Trigger: CCCACCAAGGGCATCCATGCACACCTTGCCTACCTGGAGCAGCCATAGGCAGCTCCCCTTCCCTCCTCTGCACATCATGCTGCTTCGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | TCCTGGTGGTTGGAGCAAGGCCCCTGGCCAGCATCTGGGAATCTGTaGGCAGATCCTGAGTGTGACTGGTCCCCTATCCCAGCAGATACG | + |
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Preference number: 1 (lower is better) Translates to: SWWLEQGPWPASGNL*ADPECDWSPIPADT Trigger: CGTATCTGCTGGGATAGGGGACCAGTCACACTCAGGATCTGCCCACAGATTCCCAGATGCTGGCCAGGGGCCTTGCTCCAACCACCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATaGCCCTGTCCAGTTGCAGAGCACAACCCGGCAGGAGCCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: GACSNIIKHRGPSRA*PCPVAEHNPAGAHA Trigger: TGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | AGGAGGCTCTTGCTGGGACAGCCCTGGAAGATGCTGCCAGTGCCCTaGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: RRLLLGQPWKMLPVP*EPSILWSHSQDLTC Trigger: GCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGCAGCATCTTCCAGGGCTGTCCCAGCAAGAGCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | CAGCAGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTaGCAGGGTTTACAAACTTGCCGCCCCTTGGTTCTCAGTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: QQGESPEPAGQAFTV*QGLQTCRPLVLSSL Trigger: GAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | TGCTCTCCTGGCCAAAGAGAGGGAGATAACAGGACACAGCCTCCATaGCTAACCTATCTAGGACGGGGAGAGGTGGCTGTGCTCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: CSPGQREGDNRTQPP*LTYLGRGEVAVLLV Trigger: CACCAGGAGCACAGCCACCTCTCCCCGTCCTAGATAGGTTAGCCATGGAGGCTGTGTCCTGTTATCTCCCTCTCTTTGGCCAGGAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATaGGAGGGCAGTTCAGAGAACTCTGTTCCCACTGACCATTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: LPARPPNAAMEAGRA*EGSSENSVPTDHLA Trigger: GGCTAAATGGTCAGTGGGAACAGAGTTCTCTGAACTGCCCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | ATCTCCAAGTTAGGCGGTAACATTGTCATGACTCCCCGAGGACCCTaGCACTTATCCCTGCAGCTCCCCCTTGCTATCACCCTGGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ISKLGGNIVMTPRGP*HLSLQLPLAITLGS Trigger: GGAGCCCAGGGTGATAGCAAGGGGGAGCTGCAGGGATAAGTGTCAGGGTCCTCGGGGAGTCATGACAATGTTACCGCCTAACTTGGAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | ATATCCAGCAGCCTGTGGGCGGGGCAGATGCTCTTATGTTCTTCCTaGAGCCTCTGTAAGGGCAGCGACATCATAAACCACAGGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: ISSSLWAGQMLLCSS*SLCKGSDIINHRGP Trigger: GGGGCCCCTGTGGTTTATGATGTCGCTGCCCTTACAGAGGCTTCAGGAAGAACATAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | ACCCAATCTGTTCTGCTCTCCCTGCAAGACCTCCGAATGCAGCAATaGAGGCAGGCAGGGCATGGGAGGGCAGTTCAGAGAACTCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: TQSVLLSLQDLRMQQ*RQAGHGRAVQRTLF Trigger: GAACAGAGTTCTCTGAACTGCCCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAGCAGAACAGATTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | GAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACAAACTTaGCGCCCCTTGGTTCTCAGTTCTCTCATCTGGAACAGCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: EPAGQAFTVCQGLQT*RPLVLSSLIWNSCL Trigger: GAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | GCGAAGCCTGCAGGAATCCATGCATTATTAGCACCCAATCTGTTCTaGTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AKPAGIHALLAPNLF*SPCKTSECSNGGRQ Trigger: CTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAGCAGAACAGATTGGGTGCTAATAATGCATGGATTCCTGCAGGCTTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | GAGTCATATCCCATAGGAAGCATGGGACAGTACGTGCCCAGAGTCTaGATCATATCCAGCAGCCTGTGGGCGGGGCAGATGCTCTTATGT | + |
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Preference number: 1 (lower is better) Translates to: ESYPIGSMGQYVPRV*IISSSLWAGQMLLC Trigger: ACATAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATATGATGCAGACTCTGGGCACGTACTGTCCCATGCTTCCTATGGGATATGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | CTCACTATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTaGCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LTMQPVLAQSSQTAT*LCFQVLSMYHDTLQ Trigger: CTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCATAGTGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | ACAGGGGCCCCAGCAATGCATTCTGTCCAACTGCAGAGCGAAGCCTaGAGGAATCCATGCATTATTAGCACCCAATCTGTTCTGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: TGAPAMHSVQLQSEA*RNPCIISTQSVLLS Trigger: GGAGAGCAGAACAGATTGGGTGCTAATAATGCATGGATTCCTGCAGGCTTCGCTCTGCAGTTGGACAGAATGCATTGCTGGGGCCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | ATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTaGTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGT | + |
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Preference number: 1 (lower is better) Translates to: MQPVLAQSSQTATCL*FQVLSMYHDTLQNG Trigger: ACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | TCCAGCCTGCGGGCCTGGCTTTCAGTGCTATGTGACAAAGATTTTTaGACCCTTCCCTGTTGCTGTATAGGACATCTGTGTCCTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSLRAWLSVLCDKDF*TLPCCCIGHLCPAG Trigger: GCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACATAGCACTGAAAGCCAGGCCCGCAGGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CTGATCAGATGCAGAGGTTGGGTAGGAGTCAGCATTTGGGAAACCTaGCACTGGGTTAGCTTTTTGCCCGGAGAGAAGGTGATCGGGATG | + |
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Preference number: 1 (lower is better) Translates to: LIRCRGWVGVSIWET*HWVSFLPGEKVIGM Trigger: CATCCCGATCACCTTCTCTCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCAACCTCTGCATCTGATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | TCAGGTAGGCTGATCAGATGCAGAGGTTGGGTAGGAGTCAGCATTTaGGAAACCTGGCACTGGGTTAGCTTTTTGCCCGGAGAGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SGRLIRCRGWVGVSI*ETWHWVSFLPGEKV Trigger: CACCTTCTCTCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCAACCTCTGCATCTGATCAGCCTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | CAGGGTTTACAAACTTGCCGCCCCTTGGTTCTCAGTTCTCTCATCTaGAACAGCTGCCTCTACTCTCTCAGGGTTGCTCCAGGATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QGLQTCRPLVLSSLI*NSCLYSLRVAPGFR Trigger: CCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | TCTCAGTTCTCTCATCTGGAACAGCTGCCTCTACTCTCTCAGGGTTaGTCCAGGATTCAGGTGAGTGTATCTTTGCAGCACCTCGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: SQFSHLEQLPLLSQG*SRIQVSVSLQHLEH Trigger: GTGCTCGAGGTGCTGCAAAGATACACTCACCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | AGATGCAGAGGTTGGGTAGGAGTCAGCATTTGGGAAACCTGGCACTaGGTTAGCTTTTTGCCCGGAGAGAAGGTGATCGGGATGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: RCRGWVGVSIWETWH*VSFLPGEKVIGMMK Trigger: CTTCATCATCCCGATCACCTTCTCTCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCAACCTCTGCATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | GTCAGGCATTCACTGTGTGCCAGGGTTTACAAACTTGCCGCCCCTTaGTTCTCAGTTCTCTCATCTGGAACAGCTGCCTCTACTCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: VRHSLCARVYKLAAP*FSVLSSGTAASTLS Trigger: TGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | GCATCTAGACAGCTCCAGCCTGCGGGCCTGGCTTTCAGTGCTATGTaGCAAAGATTTTTGGACCCTTCCCTGTTGCTGTATAGGACATCT | + |
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Preference number: 1 (lower is better) Translates to: ASRQLQPAGLAFSAM*QRFLDPSLLLYRTS Trigger: AGATGTCCTATACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACATAGCACTGAAAGCCAGGCCCGCAGGCTGGAGCTGTCTAGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR GCA 90 bp | CGACATCATAAACCACAGGGGCCCCAGCAATGCATTCTGTCCAACTaGAGAGCGAAGCCTGCAGGAATCCATGCATTATTAGCACCCAAT | + |
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Preference number: 1 (lower is better) Translates to: RHHKPQGPQQCILSN*RAKPAGIHALLAPN Trigger: ATTGGGTGCTAATAATGCATGGATTCCTGCAGGCTTCGCTCTGCAGTTGGACAGAATGCATTGCTGGGGCCCCTGTGGTTTATGATGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | AGACACGAACTGGAACAGATGAAGAAAGACAGCAACAGGAGAGACTaGGACAACTGGAGACACCGGCCTATAGAGAACACTGTGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: RHELEQMKKDSNRRD*DNWRHRPIENTVAT Trigger: TGTGGCCACAGTGTTCTCTATAGGCCGGTGTCTCCAGTTGTCTCAGTCTCTCCTGTTGCTGTCTTTCTTCATCTGTTCCAGTTCGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | ACCTTTGAACTTGGCTGTTCCTTTCTGGAGCTCATTAACCCATCTTaGGTTCAACCTCAGCCCCTTTCTGGACCATGGAGGTTTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: TFELGCSFLELINPS*VQPQPLSGPWRFVT Trigger: GGTGACAAACCTCCATGGTCCAGAAAGGGGCTGAGGTTGAACCCAAGATGGGTTAATGAGCTCCAGAAAGGAACAGCCAAGTTCAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR TCA 90 bp | AGAGGGCCAGCTCAGCCCAGGACTCACAGACCACAGAAGTCAGAATaGCAGAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RGPAQPRTHRPQKSE*QRNMCLATTCLERD Trigger: GTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTCTGTCATTCTGACTTCTGTGGTCTGTGAGTCCTGGGCTGAGCTGGCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CCA 90 bp | TCCTATATATCAAGGACTATATTGAGCCATCCCAGTCCTTCAAGTTaGCAAACTGATCCCAAGGTAGTAGGGCTGGAATTGTTTAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SYISRTILSHPSPSS*QTDPKVVGLELFRD Trigger: GTCCCTAAACAATTCCAGCCCTACTACCTTGGGATCAGTTTGCCAACTTGAAGGACTGGGATGGCTCAATATAGTCCTTGATATATAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CAA 90 bp | TGGCCCTGTCCAGTTGCAGAGCACAACCCGGCAGGAGCCCATGCATaGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: WPCPVAEHNPAGAHA*APTCSALPGRPLAA Trigger: TGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGGGCATCCTGGGGTTGTaGCAGCTGGGCTTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASALGAQHPVVSLSRSNLGILGL*QLGLGS Trigger: GCTGCCCAAGCCCAGCTGTCACAACCCCAGGATGCC...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR CAA 90 bp | GTCCTGCTGAGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTaGATCCGCAAGGCTAGCACTGCCCTCAGGATGCCTTGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLLSTGQCVPAPLGS*IRKASTALRMPWQR Trigger: TCTCTGCCAAGGCATCCTGAGGGCAGTGCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACTCAGCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCACCTGCAGCTCCCCCTTaGTATCACCCTGGGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPPAAPP*YHPGLP Trigger: GGGGAGCCCAGGGTGATAGCAAGGGGGAGCTGCAGG...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCACTCCAGCAGATGGCACAGCACCCCTGGGTTCAAGGAAGGAAGGAAGCTCCCCTTGGCTCCTTaGTCCGCAAGGCTAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GDHSSRWHSTPGFKEGRKLPLAP*SARLAL Trigger: CAGTGCTAGCCTTGCGGATCAAGGAGCCAAGGGGAG...CTTCCTTCCTTCCTTGAACCCAGGGGTGCTGTGCCATCTGCTGGAGTGGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTTGGCTGTGCTCCTGGTaGTTGGAGCAAGGCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GACSNIIKHRGPSRAWPCWLCSW*LEQGPW Trigger: CCAGGGGCCTTGCTCCAACCACCAGGAGCACAGCCA...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACAAGCCCTTCTGCAGCTaGGGAGGGGACAGCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RERALSLQVRHSLCARVYKPFCS*GGDSCE Trigger: CTCACAGCTGTCCCCTCCCCAGCTGCAGAAGGGCTT...GTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATGGGAGGGAGGGCAGAGTAGGGTaGCTTCCAAGACAGGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLQDLRMQQWRQAGHGREGRVG*LPRQGN Trigger: GTTTCCCTGTCTTGGAAGCCACCCTACTCTGCCCTC...CCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAAATTCCCGAGGTTTTCTaGAGAGCACGCCTCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAPTCSALPGRPLAAGMEIPEVF*RARLRG Trigger: CCCCCTGAGGCGTGCTCTCCAGAAAACCTCGGGAAT...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACGAGCACAAGTCCTGCTaGGTACTGGCCAGTGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RERALSLQVRHSLCARVYEHKSC*VLASVS Trigger: GGACACACTGGCCAGTACTCAGCAGGACTTGTGCTC...GTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCTGTCCTGCCTAGTCTaGCAGGTGGGTCTAGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASALGAQHPVVSLSRSNLLSCLV*QVGLGC Trigger: ACACCCTAGACCCACCTGTCAGACTAGGCAGGACAG...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCACTCAATGGCAGGGGCTaGACCATCTTGCCAGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPLNGRG*TILPAQ Trigger: CTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAG...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCACAGGTAGGCAAGGTGTaGATGGATGCCCTTGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPQVGKV*MDALGG Trigger: CCCACCAAGGGCATCCATGCACACCTTGCCTACCTG...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCAGCCCTCCCTGGATGGTaGGAGTCCTCAGACCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPALPGW*ESSDLF Trigger: AAAGAGGTCTGAGGACTCGCACCATCCAGGGAGGGC...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGAGAGGGACCGGAAGCTTaGAGCACAAGTCCTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGEGPEA*STSPAE Trigger: CTCAGCAGGACTTGTGCTCCAAGCTTCCGGTCCCTC...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATGGGAGGCAGGCCAGAACTATATaGGGGCATCTTGCTGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLQDLRMQQWRQAGHGRQARTI*GHLAEA Trigger: TGCTTCAGCAAGATGCCCCCATATAGTTCTGGCCTG...CCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGAGGTGGGTCTAGGGTGTaGCCAGGCTTGGGAAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGGGSRV*PGLGNG Trigger: TCCATTTCCCAAGCCTGGCCACACCCTAGACCCACC...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGGACATGGGAGGGGACAGCTGTaGGTCCAAGCTGCAGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLLYRTSVSCRLVDNMGHGRGQL*VQAAGS Trigger: AGACCCTGCAGCTTGGACTCACAGCTGTCCCCTCCC...ATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCACTGTTCTGCTCTCCCTaGAAGACCTCCGAATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPLFCSP*KTSECS Trigger: GCTGCATTCGGAGGTCTTGCAGGGAGAGCAGAACAG...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTGGCACCTACGTGCTCTaGTCTCCCTGGGAGACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPGTYVL*SPWETP Trigger: AGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCC...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCCTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGCCCCTGGCCAGCATCTaGGAATCTGTGGGCAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LPCCCIGHLCPAGWWTTWPLASI*ESVGRS Trigger: GGATCTGCCCACAGATTCCCAGATGCTGGCCAGGGG...CCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGAATATCCAGCAGCCTGTaGGCGGGGCAGATGCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGISSSL*AGQMLL Trigger: TAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATAT...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGGACATACTCCCCGAGGACCCTaGCACTTATCCCTGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLLYRTSVSCRLVDNMGHTPRGP*HLSLQL Trigger: GAGCTGCAGGGATAAGTGTCAGGGTCCTCGGGGAGT...ATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACCTCTTATGTTCTTCCTaGAGCCTCTGTAAGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RERALSLQVRHSLCARVYLLCSS*SLCKGS Trigger: GCTGCCCTTACAGAGGCTTCAGGAAGAACATAAGAG...GTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCAGGACAGGAGAGAATGTaGAACATGGCCCATGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: SALGAQHPVVSLSRSNLPGQERM*NMAHGM Trigger: CATCCCATGGGCCATGTTTCACATTCTCTCCTGTCC...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGGACATGGAGGGAAGGGGAGCTaGCTATGGCTGCTCCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLLYRTSVSCRLVDNMGHGGKGS*LWLLQV Trigger: TACCTGGAGCAGCCATAGGCAGCTCCCCTTCCCTCC...ATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTGCATCTGGGAATCTGTaGGCAGATCCTGAGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GACSNIIKHRGPSRAWPCASGNL*ADPECD Trigger: GTCACACTCAGGATCTGCCCACAGATTCCCAGATGC...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGACCCCTTTCTGGACCATaGAGGTTTGTCACCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGPLSGP*RFVTQR Trigger: TCTCTGGGTGACAAACCTCCATGGTCCAGAAAGGGG...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 90 bp | TACCTGGGTGGCCCTGTTCCTCAGGCCCGTCTTGTCCCAGAACCTTaGAACTTGGCTGTTCCTTTCTGGAGCTCATTAACCCATCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YLGGPVPQARLVPEP*NLAVPFWSSLTHLG Trigger: CCCAAGATGGGTTAATGAGCTCCAGAAAGGAACAGCCAAGTTCAAAGGTTCTGGGACAAGACGGGCCTGAGGAACAGGGCCACCCAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACGGGGGTATGTGCGTGTaGTCACTAATTTTCATCTCG | + |
|
Preference number: 2 (lower is better) Translates to: RERALSLQVRHSLCARVYGGMCV*SLIFIS Trigger: CGAGATGAAAATTAGTGATCACACGCACATACCCCC...GTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTTGGCCAGTGTGTCCCTaGTCCCCTTGGCTCCTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPWPVCP*SPWLLD Trigger: ATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCA...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTCACTATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTGCACTCAAACCTGGCCTaGGGTAGACAGAAGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: THYAASVSSELTDSHLPLHSNLA*GRQKPF Trigger: GAAAGGCTTCTGTCTACCCCAGGCCAGGTTTGAGTG...CAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCATAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCCTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGGGGTGTGGCCAGGCTTaGGAAATGGAGGGTAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LPCCCIGHLCPAGWWTTWGCGQA*EMEGRN Trigger: GTTTCTACCCTCCATTTCCCAAGCCTGGCCACACCC...CCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAAAGCATTTGGGAAACCTaGCACTGGGTTAGCTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAPTCSALPGRPLAAGMESIWET*HWVSFL Trigger: CAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCT...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 90 bp | GGTCAGGCATTCACTGTGTGCCAGGGTTTACAAACTTGCCGCCCCTaGGTTCTCAGTTCTCTCATCTGGAACAGCTGCCTCTACTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GQAFTVCQGLQTCRP*VLSSLIWNSCLYSL Trigger: GAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGGACATGCTGCTCACTCATCCTaGCAACACTCAAACCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLLYRTSVSCRLVDNMGHAAHSS*QHSNLA Trigger: GGCCAGGTTTGAGTGTTGTCAGGATGAGTGAGCAGC...ATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTCAGAGCCGCTCAGGTaGAGACAAGGCATCCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLSEPLR*RQGILG Trigger: CCCCAGGATGCCTTGTCTGCACCTGAGCGGCTCTGA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTCTCCGAATGCAGCAATaGAGGCAGGCAGGGCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLLRMQQ*RQAGHG Trigger: CCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAG...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTCCCTGGGAGACCCCTaGCTGCAGGAATGGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLSLGDP*LQEWKG Trigger: CCCTTTCCATTCCTGCAGCCAGGGGTCTCCCAGGGA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTAGGCTATACAGGCTCTaGCTGGACTCCCAGCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLRLYRL*LDSQPP Trigger: TGGTGGCTGGGAGTCCAGTCAGAGCCTGTATAGCCT...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTCCTGACACTTATCCCTaGAGCTCCCCCTTGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPPDTYP*SSPLLS Trigger: TGATAGCAAGGGGGAGCTGCAGGGATAAGTGTCAGG...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCTGCATCATATCCAGCAGCCTGTGGGCGGGGCAGATGCTCTTATGTTCTAGTGGATCAGACTTCTaGGTAGGTGCCTTTCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RVCIISSSLWAGQMLLCSSGSDF*VGAFLP Trigger: TGGGAGAAAGGCACCTACCCAGAAGTCTGATCCACT...AGAACATAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATATGATGCAGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGTTGGCTGTTCCTTTCTaGAGCTCATTAACCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ASALGAQHPVVSLSRSNLLAVPF*SSLTHL Trigger: AAGATGGGTTAATGAGCTCCAGAAAGGAACAGCCAA...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 90 bp | TGGGTAGGAGTCAGCATTTGGGAAACCTGGCACTGGGTTAGCTTTTaGCCCGGAGAGAAGGTGATCGGGATGATGAAGGAGGCTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: WVGVSIWETWHWVSF*PGEKVIGMMKEAQN Trigger: ATTTTGAGCCTCCTTCATCATCCCGATCACCTTCTCTCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGATGTGACAAAGATTTTTaGACCCTTCCCTGTTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGCDKDF*TLPCCC Trigger: ACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACA...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTGGTCCTAGGTCAGCATaGGGGTGTTTGCTCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLGPRSA*GCLLSP Trigger: AGGAGAGAGCAAACACCCCCATGCTGACCTAGGACC...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCACCTCATCAGCCCACGTaGAGATGCCATCAGAGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSPHQPT*RCHQSR Trigger: GCGGCTCTGATGGCATCTGCACGTGGGCTGATGAGG...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTAGACTTCTGGGTAGGTaGCTTTCTCCCACCCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLRLLGR*LSPTLF Trigger: GAACAGGGTGGGAGAAAGGCACCTACCCAGAAGTCT...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCATGTCCCTGCTCCCCTTaGCTCCTTGATCCGCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSCPCSP*LLDPQG Trigger: GCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACA...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 90 bp | AGTCCTTCAAGTTGGCAAACTGATCCCAAGGTAGTAGGGCTGGAATaGTTTAGGGACAGGAGAGAATGTGAAACATGGCCCATGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSSWQTDPKVVGLE*FRDRRECETWPMGW Trigger: CCATCCCATGGGCCATGTTTCACATTCTCTCCTGTCCCTAAACAATTCCAGCCCTACTACCTTGGGATCAGTTTGCCAACTTGAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTCACTATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTGCTAATTTTCATCTCGTaGCCAATGACAGAAACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: THYAASVSSELTDSHLPLLIFIS*PMTETA Trigger: AGCAGTTTCTGTCATTGGGCACGAGATGAAAATTAG...CAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCATAGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCATGCAACGAAGCAGCATaGTGTGCAGAGGAGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSCNEAA*CAEEGR Trigger: CCTTCCCTCCTCTGCACATCATGCTGCTTCGTTGCA...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAACGAGGAACCCCTGTTTaGCCCTCATCAGCCCACGTG | + |
|
Preference number: 2 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKRGTPV*PSSAHV Trigger: CACGTGGGCTGATGAGGGGCAAACAGGGGTTCCTCG...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAAGACCACTCCAGCAGATaGCACAGCACCCCTGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKDHSSR*HSTPGF Trigger: GAACCCAGGGGTGCTGTGCCATCTGCTGGAGTGGTC...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCAGTAGGAGTCAGCATTTaGGAAACCTGGCACTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSVGVSI*ETWHWV Trigger: AACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTAC...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCAATGGGTACTGACAGATaGAGAAATATCTCTATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSMGTDR*RNISMG Trigger: GCCCATAGAGATATTTCTTCATCTGTCAGTACCCAT...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CCCGGCAGGAGCCCATGCATTGGCACCTACGTGCTCTaGTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGRSPCIGTYVL*SPWETPGCRNG Trigger: TCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CACAACCCGGCAGGAGCCCATGCATTGGCACCTACGTaGTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HNPAGAHALAPT*SALPGRPLAAG Trigger: TCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGGTTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GGAGGAGGCTCTTGCTGGGACAGCCCTGGAAGATGCTaGCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGGSCWDSPGRC*QCPGSPASCGL Trigger: GAGACCACAGGATGCTGGGCTCCCAGGGCACTGGCAGCATCTTCCAGGGCTGTCCCAGCAAGAGCCTCCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GGGAGCTGCCTATGGCTGCTCCAGGTAGGCAAGGTGTaGATGGATGCCCTTGGTGGGACGTCCTGTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSCLWLLQVGKV*MDALGGTSCPS Trigger: GCTGGGACAGGACGTCCCACCAAGGGCATCCATGCACACCTTGCCTACCTGGAGCAGCCATAGGCAGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | ACACAGGGGTCCCAGCAGAGCATGGCCCTGTCCAGTTaGAGAGCACAACCCGGCAGGAGCCCATGCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQGSQQSMALSS*RAQPGRSPCIG Trigger: GCCAATGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCCATGCTCTGCTGGGACCCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | TGCCATCAGAGCCGCTCAGGTGCAGACAAGGCATCCTaGGGTTGTGACAGCTGGGCTTGGGCAGCCCGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CHQSRSGADKAS*GCDSWAWAARQ Trigger: TTGCCGGGCTGCCCAAGCCCAGCTGTCACAACCCCAGGATGCCTTGTCTGCACCTGAGCGGCTCTGATGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CCGAGGACCCTGACACTTATCCCTGCAGCTCCCCCTTaGTATCACCCTGGGCTCCCCCAACCATCCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTLTLIPAAPP*YHPGLPQPSSF Trigger: GAAGGAGGATGGTTGGGGGAGCCCAGGGTGATAGCAAGGGGGAGCTGCAGGGATAAGTGTCAGGGTCCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | AGGTGGCTGTGCTCCTGGTGGTTGGAGCAAGGCCCCTaGCCAGCATCTGGGAATCTGTGGGCAGATCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RWLCSWWLEQGP*PASGNLWADPE Trigger: CTCAGGATCTGCCCACAGATTCCCAGATGCTGGCCAGGGGCCTTGCTCCAACCACCAGGAGCACAGCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | TCTAGGACGGGGAGAGGTGGCTGTGCTCCTGGTGGTTaGAGCAAGGCCCCTGGCCAGCATCTGGGAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRTGRGGCAPGG*SKAPGQHLGIC Trigger: ACAGATTCCCAGATGCTGGCCAGGGGCCTTGCTCCAACCACCAGGAGCACAGCCACCTCTCCCCGTCCTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | AGCCCATGCATTGGCACCTACGTGCTCTGCTCTCCCTaGGAGACCCCTGGCTGCAGGAATGGAAAGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPCIGTYVLCSP*ETPGCRNGKGQ Trigger: CTGCCCCTTTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTCTGTGCTCCTGGTGGTaGGAGCAAGGCCCCTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GACSNIIKHRGPSRAWPCLCSWW*EQGPWP Trigger: TGGCCAGGGGCCTTGCTCCAACCACCAGGAGCACAG...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | CAGATGCCCCTACCCCTGACTCTGTCCTGCCTAGTCTaGCAGGTGGGTCTAGGGTGTGGCCAGGCTTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QMPLPLTLSCLV*QVGLGCGQAWE Trigger: TTCCCAAGCCTGGCCACACCCTAGACCCACCTGTCAGACTAGGCAGGACAGAGTCAGGGGTAGGGGCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | GAGACACCGGCCTATAGAGAACACTGTGGCCACAGCTaGGACCCAAGACCCTGGGGGTTGGGAGGAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ETPAYREHCGHS*DPRPWGLGGGS Trigger: AGAGCCTCCTCCCAACCCCCAGGGTCTTGGGTCTCAGCTGTGGCCACAGTGTTCTCTATAGGCCGGTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GAACCCCTGTTTGCCCCTCATCAGCCCACGTGCAGATaGCATCAGAGCCGCTCAGGTGCAGACAAGGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: EPLFAPHQPTCR*HQSRSGADKAS Trigger: GGATGCCTTGTCTGCACCTGAGCGGCTCTGATGGCATCTGCACGTGGGCTGATGAGGGGCAAACAGGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | TGGTGGCCCCTACGGATACCACGAGGAACCCCTGTTTaGCCCTCATCAGCCCACGTGCAGATGCCATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WWPLRIPRGTPV*PSSAHVQMPSE Trigger: CTCTGATGGCATCTGCACGTGGGCTGATGAGGGGCAAACAGGGGTTCCTCGTGGTATCCGTAGGGGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GTTTCACCGTGGTCACAGGAGGGCCATCCACCTAAGTaGAGAGGGCCAGCTCAGCCCAGGACTCACAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: VSPWSQEGHPPK*RGPAQPRTHRP Trigger: TGGTCTGTGAGTCCTGGGCTGAGCTGGCCCTCTGCACTTAGGTGGATGGCCCTCCTGTGACCACGGTGAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GCAGACAAGGCATCCTGGGGTTGTGACAGCTGGGCTTaGGCAGCCCGGCAAGGTGCAACGAAGCAGCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: ADKASWGCDSWA*AARQGATKQHD Trigger: ATCATGCTGCTTCGTTGCACCTTGCCGGGCTGCCCAAGCCCAGCTGTCACAACCCCAGGATGCCTTGTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CCCATAGGAAGCATGGGACAGTACGTGCCCAGAGTCTaGATCATATCCAGCAGCCTGTGGGCGGGGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PIGSMGQYVPRV*IISSSLWAGQM Trigger: CATCTGCCCCGCCCACAGGCTGCTGGATATGATGCAGACTCTGGGCACGTACTGTCCCATGCTTCCTATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GGACCGGAAGCTTGGAGCACAAGTCCTGCTGAGTACTaGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GPEAWSTSPAEY*PVCPCSPWLLD Trigger: ATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACTCAGCAGGACTTGTGCTCCAAGCTTCCGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GCATCTGGGAATCTGTGGGCAGATCCTGAGTGTGACTaGTCCCCTATCCCAGCAGATACGGCGCTGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ASGNLWADPECD*SPIPADTALAA Trigger: AGCAGCCAGCGCCGTATCTGCTGGGATAGGGGACCAGTCACACTCAGGATCTGCCCACAGATTCCCAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | TTGGAGCAAGGCCCCTGGCCAGCATCTGGGAATCTGTaGGCAGATCCTGAGTGTGACTGGTCCCCTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEQGPWPASGNL*ADPECDWSPIP Trigger: TGGGATAGGGGACCAGTCACACTCAGGATCTGCCCACAGATTCCCAGATGCTGGCCAGGGGCCTTGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GTTCTGCTCTCCCTGCAAGACCTCCGAATGCAGCAATaGAGGCAGGCAGGGCATGGGAGGGCAGTTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLQDLRMQQ*RQAGHGRAVQR Trigger: TCTCTGAACTGCCCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAGCAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATGGGAGGTTGGACCCTTCCCTGTaGCTGTATAGGACATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLQDLRMQQWRQAGHGRLDPSL*LYRTSV Trigger: CACAGATGTCCTATACAGCAACAGGGAAGGGTCCAA...CCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAACCACACAGGGGTTCCTaGATCCTCTTCCCAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: LAPTCSALPGRPLAAGMEPHRGS*ILFPNT Trigger: TGTGTTTGGGAAGAGGATCAAGGAACCCCTGTGTGG...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | GGGGCTGAACCATCTTGCCAGCCCAGGGTAGGACACTaGAGGACTCACAGTATCCTCTGCCTGGCCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GAEPSCQPRVGH*RTHSILCLACT Trigger: TGTACAGGCCAGGCAGAGGATACTGTGAGTCCTTCAGTGTCCTACCCTGGGCTGGCAAGATGGTTCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CCACCCCCATCAACAGCACCCGAGGGAGACCCACAATaGTCTCCTGGCCAAAGAGAGGGAGATAACAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PPPSTAPEGDPQ*SPGQREGDNRT Trigger: TGTCCTGTTATCTCCCTCTCTTTGGCCAGGAGAGCATTGTGGGTCTCCCTCGGGTGCTGTTGATGGGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTaGCAGGGTTTACAAACTTGCCGCCCCTTGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ESPEPAGQAFTV*QGLQTCRPLVL Trigger: GAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAATGAGTGTGACACCAGCATCTAGACAGCTCCAGCCTGCGGGCCTGGCTACGAGGAACCCCTGTTaGCCCCTCATCAGCCCACGT | + |
|
Preference number: 3 (lower is better) Translates to: FKMSVTPASRQLQPAGLATRNPC*PLISPR Trigger: ACGTGGGCTGATGAGGGGCAAACAGGGGTTCCTCGT...AGCCAGGCCCGCAGGCTGGAGCTGTCTAGATGCTGGTGTCACACTCATTTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GGCCAAAGAGAGGGAGATAACAGGACACAGCCTCCATaGCTAACCTATCTAGGACGGGGAGAGGTGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQREGDNRTQPP*LTYLGRGEVAV Trigger: CACAGCCACCTCTCCCCGTCCTAGATAGGTTAGCCATGGAGGCTGTGTCCTGTTATCTCCCTCTCTTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | AGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATaGCCCTGTCCAGTTGCAGAGCACAACCCGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SNIIKHRGPSRA*PCPVAEHNPAG Trigger: TCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACTATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTGGGTAGGAGTCAGCATTaGGGAAACCTGGCACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: THYAASVSSELTDSHLPLGRSQH*GNLALG Trigger: ACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACC...CAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCATAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCCATCTACTCTCTCAGGGTaGCTCCAGGATTCAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SALGAQHPVVSLSRSNLPSTLSG*LQDSGE Trigger: CTCACCTGAATCCTGGAGCAACCCTGAGAGAGTAGA...TGGCAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | ACCCTGGGCTCCCCCAACCATCCTCCTTCCCTAAACTaGACGCCCACCTTTATTCCAGGTGTTAGAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLGSPNHPPSLN*TPTFIPGVRSP Trigger: AGGGCTTCTAACACCTGGAATAAAGGTGGGCGTTCAGTTTAGGGAAGGAGGATGGTTGGGGGAGCCCAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | TTAGGCGGTAACATTGTCATGACTCCCCGAGGACCCTaGCACTTATCCCTGCAGCTCCCCCTTGCTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: LGGNIVMTPRGP*HLSLQLPLAIT Trigger: GGTGATAGCAAGGGGGAGCTGCAGGGATAAGTGTCAGGGTCCTCGGGGAGTCATGACAATGTTACCGCCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTaGCTCTGCTTCCAAGTGCTGAGCATGTACCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: QPVLAQSSQTAT*LCFQVLSMYHD Trigger: ATCGTGGTACATGCTCAGCACTTGGAAGCAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CGCCCCTTGGTTCTCAGTTCTCTCATCTGGAACAGCTaGCTCTACTCTCTCAGGGTTGCTCCAGGATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPLVLSSLIWNS*LYSLRVAPGFR Trigger: CCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | GTCCCACATGACACATATGAAGGTCCTAGGTCAGCATaGGGGTGTTTGCTCTCTCCTTCCACCACGGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VPHDTYEGPRSA*GCLLSPSTTGV Trigger: GACTCCCGTGGTGGAAGGAGAGAGCAAACACCCCCATGCTGACCTAGGACCTTCATATGTGTCATGTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTTCAGCATGGGGGTGTTaGCTCTCTCCTTCCACCACG | + |
|
Preference number: 3 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPSAWGC*LSPSTT Trigger: CGTGGTGGAAGGAGAGAGCAAACACCCCCATGCTGA...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | AGCCTGTGGGCGGGGCAGATGCTCTTATGTTCTTCCTaGAGCCTCTGTAAGGGCAGCGACATCATAAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLWAGQMLLCSS*SLCKGSDIINH Trigger: GTGGTTTATGATGTCGCTGCCCTTACAGAGGCTTCAGGAAGAACATAAGAGCATCTGCCCCGCCCACAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTaGTTCCAAGTGCTGAGCATGTACCACGATACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VLAQSSQTATCL*FQVLSMYHDTL Trigger: CAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | TGCAGAGGTTGGGTAGGAGTCAGCATTTGGGAAACCTaGCACTGGGTTAGCTTTTTGCCCGGAGAGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRGWVGVSIWET*HWVSFLPGEKV Trigger: CACCTTCTCTCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCAACCTCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | CAAACTTGCCGCCCCTTGGTTCTCAGTTCTCTCATCTaGAACAGCTGCCTCTACTCTCTCAGGGTTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QTCRPLVLSSLI*NSCLYSLRVAP Trigger: TGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGGTGTTTAGCCACAACTaGTCTAGAAAGGGACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASALGAQHPVVSLSRSNLVFSHN*SRKGHH Trigger: ATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACAC...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | CAGCTCCAGCCTGCGGGCCTGGCTTTCAGTGCTATGTaGCAAAGATTTTTGGACCCTTCCCTGTTGCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QLQPAGLAFSAM*QRFLDPSLLLY Trigger: ATACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACATAGCACTGAAAGCCAGGCCCGCAGGCTGGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | TGCCTCTACTCTCTCAGGGTTGCTCCAGGATTCAGGTaGGTGTATCTTTGCAGCACCTCGAGCACACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLYSLRVAPGFR*VYLCSTSSTQA Trigger: AGCTTGTGTGCTCGAGGTGCTGCAAAGATACACTCACCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GGTCAGGCATTCACTGTGTGCCAGGGTTTACAAACTTaGCGCCCCTTGGTTCTCAGTTCTCTCATCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GQAFTVCQGLQT*RPLVLSSLIWN Trigger: GTTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | CTGATCAGATGCAGAGGTTGGGTAGGAGTCAGCATTTaGGAAACCTGGCACTGGGTTAGCTTTTTGCCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LIRCRGWVGVSI*ETWHWVSFLPG Trigger: TCCGGGCAAAAAGCTAACCCAGTGCCAGGTTTCCCAAATGCTGACTCCTACCCAACCTCTGCATCTGATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | ATCACTAATTTTCATCTCGTGCCCAATGACAGAAACTaGTTACCCTACAGCCACGCCTACCTGGGTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ITNFHLVPNDRN*LPYSHAYLGGP Trigger: AGGGCCACCCAGGTAGGCGTGGCTGTAGGGTAAGCAGTTTCTGTCATTGGGCACGAGATGAAAATTAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | TCTGTCCAACTGCAGAGCGAAGCCTGCAGGAATCCATaGATTATTAGCACCCAATCTGTTCTGCTCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVQLQSEACRNP*IISTQSVLLSL Trigger: CAGGGAGAGCAGAACAGATTGGGTGCTAATAATGCATGGATTCCTGCAGGCTTCGCTCTGCAGTTGGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | AAACCACAGGGGCCCCAGCAATGCATTCTGTCCAACTaGAGAGCGAAGCCTGCAGGAATCCATGCATTATTA | + |
|
Preference number: 3 (lower is better) Translates to: KPQGPQQCILSN*RAKPAGIHALL Trigger: TAATAATGCATGGATTCCTGCAGGCTTCGCTCTGCAGTTGGACAGAATGCATTGCTGGGGCCCCTGTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | TCTCATCTGGAACAGCTGCCTCTACTCTCTCAGGGTTaGTCCAGGATTCAGGTGAGTGTATCTTTGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLEQLPLLSQG*SRIQVSVSLQH Trigger: GTGCTGCAAAGATACACTCACCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | ATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATaGGACATCATAGGAGCGTGCTTTGATATGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IGHLCPAGWWTT*DIIGACFDMRA Trigger: TGCCCTCATATCAAAGCACGCTCCTATGATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | GTGCTATGTGACAAAGATTTTTGGACCCTTCCCTGTTaGTGTATAGGACATCTGTGTCCTGCAGGCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLCDKDFWTLPC*CIGHLCPAGWW Trigger: CCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACATAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | TGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTaGACAACATGGGACATCATAGGAGCGTGCTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CCCIGHLCPAGW*TTWDIIGACFD Trigger: ATCAAAGCACGCTCCTATGATGTCCCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | CTGGAACAGATGAAGAAAGACAGCAACAGGAGAGACTaGGACAACTGGAGACACCGGCCTATAGAGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: LEQMKKDSNRRD*DNWRHRPIENT Trigger: AGTGTTCTCTATAGGCCGGTGTCTCCAGTTGTCTCAGTCTCTCCTGTTGCTGTCTTTCTTCATCTGTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR GCA 72 bp | CCAGCAATGCATTCTGTCCAACTGCAGAGCGAAGCCTaGAGGAATCCATGCATTATTAGCACCCAATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PAMHSVQLQSEA*RNPCIISTQSV Trigger: AACAGATTGGGTGCTAATAATGCATGGATTCCTGCAGGCTTCGCTCTGCAGTTGGACAGAATGCATTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | CGGGCCTGGCTTTCAGTGCTATGTGACAAAGATTTTTaGACCCTTCCCTGTTGCTGTATAGGACATCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAWLSVLCDKDF*TLPCCCIGHLC Trigger: ACACAGATGTCCTATACAGCAACAGGGAAGGGTCCAAAAATCTTTGTCACATAGCACTGAAAGCCAGGCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CCA 72 bp | CAGTGTGACCCTGGTCTCGTTCCTGATGCTTTTGCTTaGCTTGGCATGATAGCCTACCTTCCTATATATCAA | + |
|
Preference number: 3 (lower is better) Translates to: QCDPGLVPDAFA*LGMIAYLPIYQ Trigger: TTGATATATAGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGGGTCACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR TCA 72 bp | GCTCAGCCCAGGACTCACAGACCACAGAAGTCAGAATaGCAGAGAAATATGTGTTTAGCCACAACTTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AQPRTHRPQKSE*QRNMCLATTCL Trigger: TAGACAAGTTGTGGCTAAACACATATTTCTCTGTCATTCTGACTTCTGTGGTCTGTGAGTCCTGGGCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCATCCCGGCCCAGGGGTaGGTCCCGTGGGAATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STGQCVPAPLGSLIRKASIPAQG*VPWECP Trigger: CGGACATTCCCACGGGACTCACCCCTGGGCCGGGAT...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAACACCTGGCGGGAGGCTaGAGTCGGAGACAGGTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAPTCSALPGRPLAAGMEHLAGG*SRRQVA Trigger: CGCGACCTGTCTCCGACTTCAGCCTCCCGCCAGGTG...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAACAGTACAAGCAGCAGTaGTGGCAGCCCCGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPTCSALPGRPLAAGMEQYKQQ*WQPRPG Trigger: CCCGGGCCGGGGCTGCCACCACTGCTGCTTGTACTG...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | CCAGTTGCAGAGCACAACCCGGCAGGAGCCCATGCATaGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PVAEHNPAGAHA*APTCSALPGRP Trigger: GGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAATGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCATGCGTGGGCCACCGTaGCACCAGGGCCATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STGQCVPAPLGSLIRKASMRGPP*HQGHRR Trigger: CCTTCGATGGCCCTGGTGGCACGGTGGCCCACGCAT...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTTCCACACTGTCCAGGTaGAGCGGCAGGCCCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GACSNIIKHRGPSRAWPCSTLSR*SGRPRQ Trigger: CTGGCGGGGCCTGCCGCTGCACCTGGACAGTGTGGA...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | CCCGAGGACCCTGACACTTATCCCTGCAGCTCCCCCTaGCTATCACCCTGGGCTCCCCCAACCATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PEDPDTYPCSSP*LSPWAPPTILL Trigger: AAGGAGGATGGTTGGGGGAGCCCAGGGTGATAGCAAGGGGGAGCTGCAGGGATAAGTGTCAGGGTCCTCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | AACACAGGGGTCCCAGCAGAGCATGGCCCTGTCCAGTaGCAGAGCACAACCCGGCAGGAGCCCATGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGVPAEHGPVQ*QSTTRQEPMHW Trigger: CCAATGCATGGGCTCCTGCCGGGTTGTGCTCTGCAACTGGACAGGGCCATGCTCTGCTGGGACCCCTGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGAGCCCTGAGCCTGCAGGTCAGGCATTCACTGTGTGCCAGGGTTTACGTCACCAGGGAAGAATaGGTGGGCCACCGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RERALSLQVRHSLCARVYVTREE*VGHRAT Trigger: GGTGGCACGGTGGCCCACGCATTCTTCCCTGGTGAC...GTAAACCCTGGCACACAGTGAATGCCTGACCTGCAGGCTCAGGGCTCTCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCGGCGTAGTACATGAGTaGACGCACAGTATCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STGQCVPAPLGSLIRKASGVVHE*THSIPA Trigger: GGCCGGGATACTGTGCGTGCACTCATGTACTACGCC...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTTACAAGCAGCAGTGGTaGCAGCCCCGGCCCGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPYKQQW*QPRPGA Trigger: CGCCCCGGGCCGGGGCTGCCACCACTGCTGCTTGTA...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAATCTGGGGTATCCAGCTaGGCAGTAGGGGACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPTCSALPGRPLAAGMESGVSS*AVGDTD Trigger: ATCCGTGTCCCCTACTGCCCAGCTGGATACCCCAGA...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGCTCTGGCAGGAGGGGTaGCTCCTCGGGCTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPCCCIGHLCPAGWWTTWLWQEG*LLGLWG Trigger: ACCCCAGAGCCCGAGGAGCCACCCCTCCTGCCAGAG...CCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | TTGGCACCTACGTGCTCTGCTCTCCCTGGGAGACCCCTGGCTGCAGGAATGGAACATCAAAGTGGGCAGTaGACCTGTGAGGCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPTCSALPGRPLAAGMEHQSGQ*TCEARP Trigger: AGGACGTGCCTCACAGGTGCACTGCCCACTTTGATG...TTCCATTCCTGCAGCCAGGGGTCTCCCAGGGAGAGCAGAGCACGTAGGTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTGTTGCTGTATAGGACATCTGTGTCCTGCAGGCTGGTGGACAACATGGCGCTTCCTTCTCGATTaGGCCCCAGGGGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPCCCIGHLCPAGWWTTWRFLLD*APGGRS Trigger: GGACCTGCCCCCTGGGGCCCAATCGAGAAGGAAGCG...CCATGTTGTCCACCAGCCTGCAGGACACAGATGTCCTATACAGCAACAGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCCTTGCTCCATTTGGTTaGGGGTGGAGTCTGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STGQCVPAPLGSLIRKASLAPFG*GWSLPL Trigger: AAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAG...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GACCGGAAGCTTGGAGCACAAGTCCTGCTGAGTACTGGCCAGTGTGTCCCTGCTTTGGAGAAGTCGATCTaGATGTCCGCCGCGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRKLGAQVLLSTGQCVPALEKSI*MSAALP Trigger: GGGCAACGCGGCGGACATCCAGATCGACTTCTCCAA...AGCAGGGACACACTGGCCAGTACTCAGCAGGACTTGTGCTCCAAGCTTCCGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTAGCATCGATGCCACCTaGCGGGAGGCTGAAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GACSNIIKHRGPSRAWPCSIDAT*REAEVG Trigger: TCCGACTTCAGCCTCCCGCCAGGTGGCATCGATGCT...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTGCAGGTAGCCAAACCTaGTTAGCCACTCCACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GACSNIIKHRGPSRAWPCAGSQT*LATPPR Trigger: TCGGGGTGGAGTGGCTAAGCAGGTTTGGCTACCTGC...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTGCATCATATCCAGCAGCCTGTGGGCGGGGCAGATGCTCTTATGTTCTGGATGTCCGCCGCGTTaGCCGCTACCTCGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVCIISSSLWAGQMLLCSGCPPR*PLPRGS Trigger: ACTTCCACGAGGTAGCGGGCAACGCGGCGGACATCC...AGAACATAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATATGATGCAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCTTGGACAGTTCCTCCTaGGTCTGTAGCTGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: STGQCVPAPLGSLIRKASLDSSS*VCSCPD Trigger: ATCAGGGCAGCTACAGACCCAGGAGGAACTGTCCAA...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGAACAGGTCCATCCCGTaGGCATCTGAGGAACGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASALGAQHPVVSLSRSNLNRSIP*ASEERK Trigger: CTTCCGTTCCTCAGATGCCCACGGGATGGACCTGTT...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCAGAAGCAGCAGAGATaGCAGTGCCAACCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASALGAQHPVVSLSRSNLQKQQR*QCQPVC Trigger: GCACACAGGTTGGCACTGCCATCTCTGCTGCTTCTG...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTGCATCATATCCAGCAGCCTGTGGGCGGGGCAGATGCTCTTATGTTCTCAGAAGCGATGCATTTaGGCCGGCTGCAGCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RVCIISSSLWAGQMLLCSQKRCI*AGCSDT Trigger: GGTGTCGCTGCAGCCGGCTCAAATGCATCGCTTCTG...AGAACATAAGAGCATCTGCCCCGCCCACAGGCTGCTGGATATGATGCAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATGGGAGGGCCTTTGAAAAAGAATaGTTCGCCTCGAATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQDLRMQQWRQAGHGRAFEKE*FASNLG Trigger: GCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGC...CCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCACTCCAGCAGATGGCACAGCACCCCTGGGTTCAAGGAAGGAAGGAAGCATCAGACCAGCGCATaGCATCATCCAACATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDHSSRWHSTPGFKEGRKHQTSA*HHPTCW Trigger: CCAGCATGTTGGATGATGCCATGCGCTGGTCTGATG...CTTCCTTCCTTCCTTGAACCCAGGGGTGCTGTGCCATCTGCTGGAGTGGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | ACTCACTATGCAGCCAGTGTTAGCTCAGAGCTCACAGACAGCCACCTGCCTCTGCTCAGACCAATGGCATaGCCAAACTCATGGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: THYAASVSSELTDSHLPLLRPMA*PNSWTA Trigger: GGCCGTCCATGAGTTTGGTCATGCCATTGGTCTGAG...CAGAGGCAGGTGGCTGTCTGTGAGCTCTGAGCTAACACTGGCTGCATAGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTGGGCAGTGCACCTGTaGGGCACGTCCTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLWAVHL*GTSFWG Trigger: GCCCCAGAAGGACGTGCCTCACAGGTGCACTGCCCA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTAAAGTGGGTGTCCCCTaGCGTGTGGTGGTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPKVGVP*RVVVTR Trigger: CCTGGTGACCACCACACGGCAGGGGACACCCACTTT...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGCATCTAGGATGCCAGTaGTCTCCAGACCACCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASALGAQHPVVSLSRSNLHLGCQ*SPDHQT Trigger: AGTTTGGTGGTCTGGAGACCACTGGCATCCTAGATG...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | TTTAAAATGAGTGTGACACCAGCATCTAGACAGCTCCAGCCTGCGGGCCTGGCTCAGGCCCCACAGCAGTaGAGTCAGAAGCAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKMSVTPASRQLQPAGLAQAPQQ*SQKQQR Trigger: TCTCTGCTGCTTCTGACTCCACTGCTGTGGGGCCTG...AGCCAGGCCCGCAGGCTGGAGCTGTCTAGATGCTGGTGTCACACTCATTTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTCATTGTGGTCGGCCTTaGAGAAGTCGATCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GACSNIIKHRGPSRAWPCHCGRP*RSRSGC Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCACAATG...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTGGAACGGAAGGTCCATaGCTCATCGTCATCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GACSNIIKHRGPSRAWPCGTEGP*LIVIKV Trigger: CACTTTGATGACGATGAGCCATGGACCTTCCGTTCC...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | GGCCCTGTTCCTCAGGCCCGTCTTGTCCCAGAACCTTaGAACTTGGCTGTTCCTTTCTGGAGCTCATTAACC | + |
|
Preference number: 4 (lower is better) Translates to: GPVPQARLVPEP*NLAVPFWSSLT Trigger: GGTTAATGAGCTCCAGAAAGGAACAGCCAAGTTCAAAGGTTCTGGGACAAGACGGGCCTGAGGAACAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCTCGTTCCTGATGCTTTTGCTTGGCTTGGCATGATAGCCTACCTTCCTTCATCGTCATCAAAGTaGGTGTCCCCTGCCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVPDAFAWLGMIAYLPSSSSK*VSPAVW Trigger: CCACACGGCAGGGGACACCCACTTTGATGACGATGA...AGGAAGGTAGGCTATCATGCCAAGCCAAGCAAAAGCATCAGGAACGAGACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTGGCCTCATCTAGGATaGCAGTGGTCTCCAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLWPHLG*QWSPDH Trigger: GTGGTCTGGAGACCACTGGCATCCTAGATGAGGCCA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTCATCATCCAACATGCTaGGGACACCTCTCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLHHPTC*GHLSTG Trigger: CCCTGTGGAGAGGTGTCCCCAGCATGTTGGATGATG...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | CTCTCATCTGGAACAGCTGCCTCTACTCTCTCAGGGTaGCTCCAGGATTCAGGTGAGTGTATCTTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSGTAASTLSG*LQDSGECIFAA Trigger: TGCTGCAAAGATACACTCACCTGAATCCTGGAGCAACCCTGAGAGAGTAGAGGCAGCTGTTCCAGATGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | AGGTCAGGCATTCACTGTGTGCCAGGGTTTACAAACTaGCCGCCCCTTGGTTCTCAGTTCTCTCATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSGIHCVPGFTN*PPLGSQFSHLE Trigger: TTCCAGATGAGAGAACTGAGAACCAAGGGGCGGCAAGTTTGTAAACCCTGGCACACAGTGAATGCCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCACTCATGGACGGCCACTaGAAACAGGTCCATCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSLMDGH*KQVHPV Trigger: CACGGGATGGACCTGTTTGCAGTGGCCGTCCATGAG...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | CTGCAGGGTCTCAGGCCAGAACTATATGGGGGCATCTaGCTGAAGCAATGGGTACTGACAGATGAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LQGLRPELYGGI*LKQWVLTDEEI Trigger: TATTTCTTCATCTGTCAGTACCCATTGCTTCAGCAAGATGCCCCCATATAGTTCTGGCCTGAGACCCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | AGTTGGCAAACTGATCCCAAGGTAGTAGGGCTGGAATaGTTTAGGGACAGGAGAGAATGTGAAACATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SWQTDPKVVGLE*FRDRRECETWP Trigger: GGGCCATGTTTCACATTCTCTCCTGTCCCTAAACAATTCCAGCCCTACTACCTTGGGATCAGTTTGCCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTCGGAAGAAATAGGATaGACCATCAGACCAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLSEEIG*TIRPAH Trigger: ATGCGCTGGTCTGATGGTGCATCCTATTTCTTCCGA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCATCCTCTTGCTCCATTTaGTTGGGGGTGGAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSSSCSI*LGVESA Trigger: GGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGA...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCACAACCTGTGTGCGTCTaGAGTGCAGGAACATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSQPVCV*SAGTYC Trigger: GCAGTATGTTCCTGCACTTCAGACGCACACAGGTTG...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAAGGTAGCCAGGGTCCATaGGCCGTGTGTGGTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKGSQGP*AVCGHH Trigger: ATGATGACCACACACGGCGCATGGACCCTGGCTACC...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAATCATCAGGGCCAGAGTaGCCTCATCTAGGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKSSGPE*PHLGCQ Trigger: CTGGCATCCTAGATGAGGCCACTCTGGCCCTGATGA...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAAGCTTCGCCTCGAATCTaGGCCACAGCATCAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKASPRI*ATASKW Trigger: CCACTTTGATGCTGTGGCCCAGATTCGAGGCGAAGC...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTTATCAAGAAAACAATCTTGTGGTCACTaGTACGCTCATACACGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAEHVPRYLAEWYLLSRKQSCGH*YAHTRR Trigger: ACGCCGTGTATGAGCGTACCAGTGACCACAAGATTG...TTTTCTTGATAAAAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| 3UTR CAA 72 bp | TGCTATTGTTGTTTTTGTTTGTTTGTTTGGTTGGTTTaGGTTTTTGGAGACAGGGTTTCTCTGTATAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYCCFCLFVWLV*VFGDRVSLYSP Trigger: AGGGCTATACAGAGAAACCCTGTCTCCAAAAACCAAAACCAACCAAACAAACAAACAAAAACAACAATAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 90 bp | ACACTGTCCAGGTGCAGCGGCAGGCCCCGCCAGAAGCGATGCATTTaGGCCGGCTGCAGCGACACCAAGTGTCGGTCCCGGGTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSRCSGRPRQKRCI*AGCSDTKCRSRVSL Trigger: GAGGCTGACCCGGGACCGACACTTGGTGTCGCTGCAGCCGGCTCAAATGCATCGCTTCTGGCGGGGCCTGCCGCTGCACCTGGACAGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 90 bp | CGCCAGCGGCTCACCGCATACCAGCCAGTCGCGGGCTGTAGACTGTaGGTACCCGGGGGCTGCTTCCAGCTCGCCATCCAGCACTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQRLTAYQPVAGCRL*VPGGCFQLAIQHFP Trigger: TGGAAAGTGCTGGATGGCGAGCTGGAAGCAGCCCCCGGGTACCCACAGTCTACAGCCCGCGACTGGCTGGTATGCGGTGAGCCGCTGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 90 bp | CGTCTGAAGTGCAGGAACATACTGCCAGACCATCTTGGGCCCCACTaGGGCCCTGGGGTCCAGGCCCTACATCCTCCGCATCCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLKCRNILPDHLGPH*GPGVQALHPPHPPA Trigger: CGCTGGCGGATGCGGAGGATGTAGGGCCTGGACCCCAGGGCCGCAGTGGGGCCCAAGATGGTCTGGCAGTATGTTCCTGCACTTCAGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 90 bp | GCATACCAGCCAGTCGCGGGCTGTAGACTGTGGGTACCCGGGGGCTaGTTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AYQPVAGCRLWVPGG*FQLAIQHFPVLLAS Trigger: CGAGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAAGCAGCCCCCGGGTACCCACAGTCTACAGCCCGCGACTGGCTGGTATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 90 bp | AGTCCTGTCATTGTGGGCCCAGGAGAAGACAGCATCGATGCCACCTaGCGGGAGGCTGAAGTCGGAGACAGGTCGCGGGTACCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVIVGPGEDSIDAT*REAEVGDRSRVPFL Trigger: GAGGAAGGGTACCCGCGACCTGTCTCCGACTTCAGCCTCCCGCCAGGTGGCATCGATGCTGTCTTCTCCTGGGCCCACAATGACAGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | GCCAGTGCCCTGGGAGCCCAGCATCCTGTGGTCTCACTCTCAAGATCTAACCTGTGGATGTCCGCCGCGTaGCCCGCTACCTCGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASALGAQHPVVSLSRSNLWMSAA*PATSWK Trigger: CTTCCACGAGGTAGCGGGCAACGCGGCGGACATCCA...CAGGTTAGATCTTGAGAGTGAGACCACAGGATGCTGGGCTCCCAGGGCACTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTGCAAGACCTCCGAATGCAGCAATGGAGGCAGGCAGGGCATGGGAGGCCAGAAGCGATGCATTaGAGCCGGCTGCAGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQDLRMQQWRQAGHGRPEAMH*SRLQRH Trigger: GTGTCGCTGCAGCCGGCTCAAATGCATCGCTTCTGG...CCTCCCATGCCCTGCCTGCCTCCATTGCTGCATTCGGAGGTCTTGCAGGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 90 bp | CATAGCGTAGCGGGTCACCCACGGGGCCCTGGTAGTACGGTTGCATaGTGGAGCTTGGGGCGGCAACATGGCTCAGACCAATGGCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSVAGHPRGPGSTVA*WSLGRQHGSDQWHD Trigger: GTCATGCCATTGGTCTGAGCCATGTTGCCGCCCCAAGCTCCATCATGCAACCGTACTACCAGGGCCCCGTGGGTGACCCGCTACGCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 90 bp | GAGGGCGTAGTACATGAGTGCACGCACAGTATCCCGGCCCAGGGGTaGGTCCCGTGGGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGVVHECTHSIPAQG*VPWECPDPPRKVPL Trigger: AAGAGGAACCTTTCTTGGAGGGTCCGGACATTCCCACGGGACTCACCCCTGGGCCGGGATACTGTGCGTGCACTCATGTACTACGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 90 bp | GAATGTCCGGACCCTCCAAGAAAGGTTCCTCTTGCTCCATTTGGTTaGGGGTGGAGTCTGCCGCTTCCTTCTCGATTGGGCCCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECPDPPRKVPLAPFG*GWSLPLPSRLGPRG Trigger: CCCCCTGGGGCCCAATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 90 bp | TCAGAAGCAGCAGAGATGGCAGTGCCAACCTGTGTGCGTCTGAAGTaGAGGAACATACTGCCAGACCATCTTGGGCCCCACTGCGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SEAAEMAVPTCVRLK*RNILPDHLGPHCGP Trigger: AGGGCCGCAGTGGGGCCCAAGATGGTCTGGCAGTATGTTCCTGCACTTCAGACGCACACAGGTTGGCACTGCCATCTCTGCTGCTTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 90 bp | GTGGGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTTGCTCCATTTaGTTGGGGGTGGAGTCTGCCGCTTCCTTCTCGATTGGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGMSGPSKKGSSCSI*LGVESAASFSIGPQ Trigger: CTGGGGCCCAATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | GGTGCGTGCAGCAACATCATAAAACACAGGGGTCCCAGCAGAGCATGGCCCTGTGCCCTGGTAGTACGGTaGCATGATGGAGCTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GACSNIIKHRGPSRAWPCALVVR*HDGAWG Trigger: GCCCCAAGCTCCATCATGCAACCGTACTACCAGGGC...ACAGGGCCATGCTCTGCTGGGACCCCTGTGTTTTATGATGTTGCTGCACGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 90 bp | TGGAGTCAGAAGCAGCAGAGATGGCAGTGCCAACCTGTGTGCGTCTaGAGTGCAGGAACATACTGCCAGACCATCTTGGGCCCCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: WSQKQQRWQCQPVCV*SAGTYCQTILGPTA Trigger: CGCAGTGGGGCCCAAGATGGTCTGGCAGTATGTTCCTGCACTTCAGACGCACACAGGTTGGCACTGCCATCTCTGCTGCTTCTGACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | AACCTATCTAGGACGGGGAGAGGTGGCTGTGCTCCTGGTGGTTGGAGCAAGGCCATGGCAGTAATCGCTTaGGACAGTTCCTCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLSRTGRGGCAPGGWSKAMAVIA*DSSSWV Trigger: GACCCAGGAGGAACTGTCCAAAGCGATTACTGCCAT...GGCCTTGCTCCAACCACCAGGAGCACAGCCACCTCTCCCCGTCCTAGATAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 90 bp | GTGGCCTCATCTAGGATGCCAGTGGTCTCCAGACCACCAAACTGCTaGATGGCAGTAATCGCTTTGGACAGTTCCTCCTGGGTCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VASSRMPVVSRPPNC*MAVIALDSSSWVCS Trigger: GCTACAGACCCAGGAGGAACTGTCCAAAGCGATTACTGCCATGCAGCAGTTTGGTGGTCTGGAGACCACTGGCATCCTAGATGAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTTACTGCCAGACCATCTaGGGCCCCACTGCGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLYCQTI*GPTAAL Trigger: CAGGGCCGCAGTGGGGCCCAAGATGGTCTGGCAGTA...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGACAAGAAAGGTTCCTCTaGCTCCATTTGGTTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGQERFL*LHLVGG Trigger: ACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTG...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | AGTACTGGCCAGTGTGTCCCTGCTCCCCTTGGCTCCTTGATCCGCAAGGCTAGCCCTTCCTCTACGTTGTaGTCCTTAAACACCCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: STGQCVPAPLGSLIRKASPSSTL*SLNTQY Trigger: ATACTGGGTGTTTAAGGACAACAACGTAGAGGAAGG...GCTAGCCTTGCGGATCAAGGAGCCAAGGGGAGCAGGGACACACTGGCCAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 90 bp | TCGGTCCCGGGTCAGCCTCCAGAAATACTTGCCTTTGAAAAAGAATaGTTCGCCTCGAATCTGGGCCACAGCATCAAAGTGGGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPGQPPEILAFEKE*FASNLGHSIKVGSA Trigger: TGCACTGCCCACTTTGATGCTGTGGCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACCCGGGACCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | GAGAAATATGTGTTTAGCCACAACTTGTCTAGAAAGGGACACCATGTGGTGTCACCGCTTCCTTCTCGATaGGGCCCCAGGGGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKYVFSHNLSRKGHHVVSPLPSR*GPRGQV Trigger: GACCTGCCCCCTGGGGCCCAATCGAGAAGGAAGCGG...TGACACCACATGGTGTCCCTTTCTAGACAAGTTGTGGCTAAACACATATTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTCAGGCTCAATGGCAGGGGCTGAACCATCTTGCCAGCCCAGGGTAGGATACCCTTCCTCTACGTaGTTGTCCTTAAACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSSGSMAGAEPSCQPRVGYPSST*LSLNTQ Trigger: CTGGGTGTTTAAGGACAACAACGTAGAGGAAGGGTA...TCCTACCCTGGGCTGGCAAGATGGTTCAGCCCCTGCCATTGAGCCTGAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | AACCTATCTAGGACGGGGAGAGGTGGCTGTGCTCCTGGTGGTTGGAGCAAGGCCAGCCTCCAGAAATACTaGCCTTTGAAAAAGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLSRTGRGGCAPGGWSKASLQKY*PLKKNA Trigger: AGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCT...GGCCTTGCTCCAACCACCAGGAGCACAGCCACCTCTCCCCGTCCTAGATAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | GACCGGAAGCTTGGAGCACAAGTCCTGCTGAGTACTGGCCAGTGTGTCCCTGCTCAGAAATACTTGCCTTaGAAAAAGAATGCTTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRKLGAQVLLSTGQCVPAQKYLP*KKNASP Trigger: AGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTG...AGCAGGGACACACTGGCCAGTACTCAGCAGGACTTGTGCTCCAAGCTTCCGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTTCCAAGTGCTGAGCATGTACCACGATACCTTGCAGAATGGTATCTTCAGTATCTGTCTCCTTaGAAGAAGACAATCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLPSAEHVPRYLAEWYLQYLSP*KKTILW Trigger: CCACAAGATTGTCTTCTTCAAAGGAGACAGATACTG...AAGATACCATTCTGCAAGGTATCGTGGTACATGCTCAGCACTTGGAAGCAGAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS GCA 72 bp | CCCGAGGCTGAGGTCCTCCGCGCGGGGCGCGGGCGCTaGGCAGCCCCCATGGGCCGCCAGCGCCAGTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: PEAEVLRAGRGR*AAPMGRQRQYK Trigger: CTTGTACTGGCGCTGGCGGCCCATGGGGGCTGCGCAGCGCCCGCGCCCCGCGCGGAGGACCTCAGCCTCGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 72 bp | GGTAGCCAAACCTGCTTAGCCACTCCACCCCGAGGCTaGGGTCCTCCGCGCGGGGCGCGGGCGCTGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSQTCLATPPRG*GPPRGARALRS Trigger: GCTGCGCAGCGCCCGCGCCCCGCGCGGAGGACCTCAGCCTCGGGGTGGAGTGGCTAAGCAGGTTTGGCTACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CAA 90 bp | CACACTGTCCAGGTGCAGCGGCAGGCCCCGCCAGAAGCGATGCATTaGAGCCGGCTGCAGCGACACCAAGTGTCGGTCCCGGGTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HTVQVQRQAPPEAMH*SRLQRHQVSVPGQP Trigger: AGGCTGACCCGGGACCGACACTTGGTGTCGCTGCAGCCGGCTCAAATGCATCGCTTCTGGCGGGGCCTGCCGCTGCACCTGGACAGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 72 bp | CTCACCGCATACCAGCCAGTCGCGGGCTGTAGACTGTaGGTACCCGGGGGCTGCTTCCAGCTCGCCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTAYQPVAGCRL*VPGGCFQLAIQ Trigger: CTGGATGGCGAGCTGGAAGCAGCCCCCGGGTACCCACAGTCTACAGCCCGCGACTGGCTGGTATGCGGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 72 bp | GCGGGTCACCCACGGGGCCCTGGTAGTACGGTTGCATaGTGGAGCTTGGGGCGGCAACATGGCTCAGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGHPRGPGSTVA*WSLGRQHGSDQ Trigger: TTGGTCTGAGCCATGTTGCCGCCCCAAGCTCCATCATGCAACCGTACTACCAGGGCCCCGTGGGTGACCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 72 bp | GCGTCTGAAGTGCAGGAACATACTGCCAGACCATCTTaGGCCCCACTGCGGCCCTGGGGTCCAGGCCCTACA | + |
|
Preference number: 6 (lower is better) Translates to: ASEVQEHTARPS*APLRPWGPGPT Trigger: TGTAGGGCCTGGACCCCAGGGCCGCAGTGGGGCCCAAGATGGTCTGGCAGTATGTTCCTGCACTTCAGACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS CCA 72 bp | ATTGTGGGCCCAGGAGAAGACAGCATCGATGCCACCTaGCGGGAGGCTGAAGTCGGAGACAGGTCGCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: IVGPGEDSIDAT*REAEVGDRSRV Trigger: TACCCGCGACCTGTCTCCGACTTCAGCCTCCCGCCAGGTGGCATCGATGCTGTCTTCTCCTGGGCCCACAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
||
| CDS TCA 72 bp | GTACATGAGTGCACGCACAGTATCCCGGCCCAGGGGTaGGTCCCGTGGGAATGTCCGGACCCTCCAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VHECTHSIPAQG*VPWECPDPPRK Trigger: CTTTCTTGGAGGGTCCGGACATTCCCACGGGACTCACCCCTGGGCCGGGATACTGTGCGTGCACTCATGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS TCA 72 bp | AGGAGAAGACAGCATCGATGCCACCTGGCGGGAGGCTaGAGTCGGAGACAGGTCGCGGGTACCCTTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: RRRQHRCHLAGG*SRRQVAGTLPL Trigger: TAGAGGAAGGGTACCCGCGACCTGTCTCCGACTTCAGCCTCCCGCCAGGTGGCATCGATGCTGTCTTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS GCA 72 bp | ATGCACCATCAGACCAGCGCATGGCATCATCCAACATaGTGGGGACACCTCTCCACAGGGGTCCCTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: MHHQTSAWHHPT*WGHLSTGVPGQ Trigger: CTGCCCAGGGACCCCTGTGGAGAGGTGTCCCCAGCATGTTGGATGATGCCATGCGCTGGTCTGATGGTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CCA 72 bp | CACGGGGCCCTGGTAGTACGGTTGCATGATGGAGCTTaGGGCGGCAACATGGCTCAGACCAATGGCATGACC | + |
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Preference number: 6 (lower is better) Translates to: HGALVVRLHDGA*GGNMAQTNGMT Trigger: GGTCATGCCATTGGTCTGAGCCATGTTGCCGCCCCAAGCTCCATCATGCAACCGTACTACCAGGGCCCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | GGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTTGCTCCATTTGGTaGGGGGTGGAGTCTGCCGCTTCCTTCTCGATTGGGCCCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GMSGPSKKGSSCSIW*GVESAASFSIGPQG Trigger: CCCCTGGGGCCCAATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | TCGGCCTTGGAGAAGTCGATCTGGATGTCCGCCGCGTaGCCCGCTACCTCGTGGAAGTTCAAGGGTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: SALEKSIWMSAA*PATSWKFKGVM Trigger: CATCACACCCTTGAACTTCCACGAGGTAGCGGGCAACGCGGCGGACATCCAGATCGACTTCTCCAAGGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | CGTGGGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTTGCTCCATTaGGTTGGGGGTGGAGTCTGCCGCTTCCTTCTCGATTGGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RGNVRTLQERFLLLH*VGGGVCRFLLDWAP Trigger: TGGGGCCCAATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTCCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | GGTGAGTCCCGTGGGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTaGCTCCATTTGGTTGGGGGTGGAGTCTGCCGCTTCCTTCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: GESRGNVRTLQERFL*LHLVGGGVCRFLLD Trigger: ATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTCCCACGGGACTCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CCA 72 bp | TGCTGCATGGCAGTAATCGCTTTGGACAGTTCCTCCTaGGTCTGTAGCTGCCCTGATGCCGGATCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CCMAVIALDSSS*VCSCPDAGSAG Trigger: GCCTGCAGATCCGGCATCAGGGCAGCTACAGACCCAGGAGGAACTGTCCAAAGCGATTACTGCCATGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CCA 72 bp | GAAGGGAGCATCGAGGGGTTTTCATCAGGGCCAGAGTaGCCTCATCTAGGATGCCAGTGGTCTCCAGACCAC | + |
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Preference number: 6 (lower is better) Translates to: EGSIEGFSSGPE*PHLGCQWSPDH Trigger: GTGGTCTGGAGACCACTGGCATCCTAGATGAGGCCACTCTGGCCCTGATGAAAACCCCTCGATGCTCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | CGTGGGAATGTCCGGACCCTCCAAGAAAGGTTCCTCTaGCTCCATTTGGTTGGGGGTGGAGTCTGCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RGNVRTLQERFL*LHLVGGGVCRF Trigger: GAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCCGGACATTCCCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | CCAGTGGTCTCCAGACCACCAAACTGCTGCATGGCAGTAATCGCTTaGGACAGTTCCTCCTGGGTCTGTAGCTGCCCTGATGCCGGATCT | + |
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Preference number: 6 (lower is better) Translates to: PVVSRPPNCCMAVIA*DSSSWVCSCPDAGS Trigger: AGATCCGGCATCAGGGCAGCTACAGACCCAGGAGGAACTGTCCAAAGCGATTACTGCCATGCAGCAGTTTGGTGGTCTGGAGACCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | GGACCCTCCAAGAAAGGTTCCTCTTGCTCCATTTGGTaGGGGGTGGAGTCTGCCGCTTCCTTCTCGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: GPSKKGSSCSIW*GVESAASFSIG Trigger: CCCAATCGAGAAGGAAGCGGCAGACTCCACCCCCAACCAAATGGAGCAAGAGGAACCTTTCTTGGAGGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS TCA 72 bp | AAGCAGCAGAGATGGCAGTGCCAACCTGTGTGCGTCTaGAGTGCAGGAACATACTGCCAGACCATCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: KQQRWQCQPVCV*SAGTYCQTILG Trigger: GCCCAAGATGGTCTGGCAGTATGTTCCTGCACTTCAGACGCACACAGGTTGGCACTGCCATCTCTGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | TGCAGCGACACCAAGTGTCGGTCCCGGGTCAGCCTCCAGAAATACTaGCCTTTGAAAAAGAATGCTTCGCCTCGAATCTGGGCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSDTKCRSRVSLQKY*PLKKNASPRIWATA Trigger: TGCTGTGGCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACCCGGGACCGACACTTGGTGTCGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS GCA 72 bp | TCATCTAGGATGCCAGTGGTCTCCAGACCACCAAACTaGTGCATGGCAGTAATCGCTTTGGACAGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRMPVVSRPPN*CMAVIALDSSS Trigger: GGAGGAACTGTCCAAAGCGATTACTGCCATGCAGCAGTTTGGTGGTCTGGAGACCACTGGCATCCTAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | TGTCGGTCCCGGGTCAGCCTCCAGAAATACTTGCCTTaGAAAAAGAATGCTTCGCCTCGAATCTGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: CRSRVSLQKYLP*KKNASPRIWAT Trigger: TGTGGCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACCCGGGACCGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 90 bp | GACACCAAGTGTCGGTCCCGGGTCAGCCTCCAGAAATACTTGCCTTaGAAAAAGAATGCTTCGCCTCGAATCTGGGCCACAGCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DTKCRSRVSLQKYLP*KKNASPRIWATASK Trigger: CTTTGATGCTGTGGCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACCCGGGACCGACACTTGGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS GCA 72 bp | CACTTTCCAGTACTCCTGGCCTCGGAAGAAATAGGATaGACCATCAGACCAGCGCATGGCATCATCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: HFPVLLASEEIG*TIRPAHGIIQH Trigger: ATGTTGGATGATGCCATGCGCTGGTCTGATGGTGCATCCTATTTCTTCCGAGGCCAGGAGTACTGGAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | ACCAAGTGTCGGTCCCGGGTCAGCCTCCAGAAATACTaGCCTTTGAAAAAGAATGCTTCGCCTCGAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: TKCRSRVSLQKY*PLKKNASPRIW Trigger: CCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACCCGGGACCGACACTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | AAGTCGGAGACAGGTCGCGGGTACCCTTCCTCTACGTaGTTGTCCTTAAACACCCAGTATCTGTCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KSETGRGYPSST*LSLNTQYLSPL Trigger: CAAAGGAGACAGATACTGGGTGTTTAAGGACAACAACGTAGAGGAAGGGTACCCGCGACCTGTCTCCGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS GCA 72 bp | GGTCAGCCTCCAGAAATACTTGCCTTTGAAAAAGAATaGTTCGCCTCGAATCTGGGCCACAGCATCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GQPPEILAFEKE*FASNLGHSIKV Trigger: CACTTTGATGCTGTGGCCCAGATTCGAGGCGAAGCATTCTTTTTCAAAGGCAAGTATTTCTGGAGGCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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| CDS CAA 72 bp | AACACCCAGTATCTGTCTCCTTTGAAGAAGACAATCTaGTGGTCACTGGTACGCTCATACACGGCGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: NTQYLSPLKKTI*WSLVRSYTAST Trigger: TGTGGACGCCGTGTATGAGCGTACCAGTGACCACAAGATTGTCTTCTTCAAAGGAGACAGATACTGGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031390.10 |
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