Pregenerated sensors for MMP16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028226Ensembl transcript IDs: ENSMUST00000029881.10, ENSMUST00000142434.8, ENSMUST00000149353.2, ENSMUST00000183662.8
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTGCAGGTTTGGAGGTTCAGCCCATTATCATCTGTGTAGAGCATaGCAGTGTCCAGACAGGCATGGTGCAGGAGGAGCTGAGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: CCRFGGSAHYHLCRA*QCPDRHGAGGAESS Trigger: AGAACTCTCAGCTCCTCCTGCACCATGCCTGTCTGGACACTGCCATGCTCTACACAGATGATAATGGGCTGAACCTCCAAACCTGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR TCA 90 bp | TGTCCCAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTaGCAAAACGATGTGCAGGAGACTATCCATAGTGGTCACAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: CPNSLASCMCSRSPT*QNDVQETIHSGHRA Trigger: AGCTCTGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CCA 90 bp | AATACTTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATaGACGGCCTGGGACAAAGGCCTAACACAACTGGGAAGAACATCA | + |
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Preference number: 1 (lower is better) Translates to: NTSCSALRGVLLTDQ*TAWDKGLTQLGRTS Trigger: TGATGTTCTTCCCAGTTGTGTTAGGCCTTTGTCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CCA 90 bp | GCTGGCTGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTGGTaGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: AGCVVQFDDNVYIIW*AESFFISVCWSITA Trigger: GGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR GCA 90 bp | ATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGCTCTaGTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ITITFFPSETQYFLL*FARSIADRPMDGLG Trigger: TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR GCA 90 bp | ACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCATGTaGAGGACCAGCAACCATCTAGGTTTGGAAGGTCAGCCTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: TVHHGSFSMIIFPLM*RTSNHLGLEGQPPS Trigger: TGATGGAGGCTGACCTTCCAAACCTAGATGGTTGCTGGTCCTGCACATGAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CCA 90 bp | GTCTACATCATCTGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTaGTCCATCACAGCCCATAAAGTCCTTGAGGATGGATCTTGGATA | + |
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Preference number: 1 (lower is better) Translates to: VYIIWWAESFFISVC*SITAHKVLEDGSWI Trigger: TATCCAAGATCCATCCTCAAGGACTTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGTAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR CCA 90 bp | AGTGCTGGCTGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTaGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACA | + |
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Preference number: 1 (lower is better) Translates to: SAGCVVQFDDNVYII*WAESFFISVCWSIT Trigger: TGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR TCA 90 bp | TTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACAAATaGCCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: FSKPVMAFPFGQFYK*PDCKTDHPDSVSWS Trigger: GGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGGTCATTTGTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR TCA 90 bp | CTTTCACACAAAGCCAATTGTCTGACTCATGGGGTGCTTTCCTTCTaGCCATCTCTAATAAGTTCACAGCCCAGTGGCTGCAAAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: LSHKANCLTHGVLSF*PSLISSQPSGCKAI Trigger: AATGGCTTTGCAGCCACTGGGCTGTGAACTTATTAGAGATGGTCAGAAGGAAAGCACCCCATGAGTCAGACAATTGGCTTTGTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR TCA 90 bp | ATTTTACTGGGCATTGAGCGTGCAGAGGAAAGGCCTAGAACTGAATaGCAAAGAAAGACAGAGGACTGGAGAACAGCAGATACTGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: ILLGIERAEERPRTE*QRKTEDWRTADTVH Trigger: ATGCACAGTATCTGCTGTTCTCCAGTCCTCTGTCTTTCTTTGTCATTCAGTTCTAGGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR TCA 90 bp | ATGGCTAAATGCCAGAAGCCACACCAACCCTTTGAGAACTATGGCTaGCATGCGATAGGTAATGCATTGGTAGGTATTCATGCAACTCAG | + |
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Preference number: 1 (lower is better) Translates to: MAKCQKPHQPFENYG*HAIGNALVGIHATQ Trigger: CTGAGTTGCATGAATACCTACCAATGCATTACCTATCGCATGTCAGCCATAGTTCTCAAAGGGTTGGTGTGGCTTCTGGCATTTAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR GCA 90 bp | CCATCTCTAATAAGTTCACAGCCCAGTGGCTGCAAAGCCATTCACTaGAAGAAGCAGCTTCTAAAATCAATAAAGAGGTCTGTCAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: PSLISSQPSGCKAIH*KKQLLKSIKRSVSC Trigger: GCAACTGACAGACCTCTTTATTGATTTTAGAAGCTGCTTCTTGCAGTGAATGGCTTTGCAGCCACTGGGCTGTGAACTTATTAGAGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR CCA 90 bp | TTTTCTTCTATATTTCCTCTTCTTCAGTTAATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGGAAAGGCCTAGAACTGAATGACAAA | + |
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Preference number: 1 (lower is better) Translates to: FSSIFPLLQLILKFY*ALSVQRKGLELNDK Trigger: TTTGTCATTCAGTTCTAGGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGATTAACTGAAGAAGAGGAAATATAGAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR GCA 90 bp | CTCACATTCAAAATCATGAATGTCTTGTTGAAGTACAGTCTGCATTaGATAATGTGGTACTATGAAGCCATGAATCCATTTCTCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LTFKIMNVLLKYSLH*IMWYYEAMNPFLFP Trigger: AGGAAAGAGAAATGGATTCATGGCTTCATAGTACCACATTATGCAATGCAGACTGTACTTCAACAAGACATTCATGATTTTGAATGTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGAAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAATGGACGAAAGCTCCCTaGGGTGATTCAGGGATCCCC | + |
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Preference number: 2 (lower is better) Translates to: TGKNITMILGQEAGGGSEWTKAP*GDSGIP Trigger: GGGGATCCCTGAATCACCTCAGGGAGCTTTCGTCCA...TTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTTCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAAATTTTACTGGGCATTaGGCGTGCAGAGGAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: FLLCFARSIADRPMDGLGNFTGH*ACRGKA Trigger: GGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATT...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | ATGATTATATTTCCACTCATGTGCAGGACCAGCAACCATCTAGGTTaGGAAGGTCAGCCTCCATCAGGCTGCCACAAGCCTGCTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: MIIFPLMCRTSNHLG*EGQPPSGCHKPAPS Trigger: GCTAGGAGCAGGCTTGTGGCAGCCTGATGGAGGCTGACCTTCCAAACCTAGATGGTTGCTGGTCCTGCACATGAGTGGAAATATAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACCAGCCTCCATCAGGCTaGCACAAGCCTGCTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYQPPSG*HKPAPS Trigger: GCTAGGAGCAGGCTTGTGGCAGCCTGATGGAGGCTG...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAGATGGCTTTCCCTTTTaGCCAGTTCTACAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: FLLCFARSIADRPMDGLGDGFPF*PVLQMT Trigger: GGTCATTTGTAGAACTGGCCAAAAGGGAAAGCCATC...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | TTCCTTCAGAGACACAATACTTCTTGCTCTGCTTTGCGCGGAGTATaGCTGACAGACCAATGGACGGCCTGGGACAAAGGCCTAACACAA | + |
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Preference number: 2 (lower is better) Translates to: FLQRHNTSCSALRGV*LTDQWTAWDKGLTQ Trigger: TTGTGTTAGGCCTTTGTCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTCTGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | CCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGCTCTGCTTaGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: PSPSFLQRHNTSCSA*RGVLLTDQWTAWDK Trigger: TTTGTCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACTCCCCTTCCAGATGGTaGTGGGCTTGGGGTAACCAG | + |
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Preference number: 2 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYSPSRW*WAWGNQ Trigger: CTGGTTACCCCAAGCCCATCACCATCTGGAAGGGGA...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTCTTGCATAGAGCGTTTACAGTACAGTATGTGGCGGGGTGTTCCTTTCCTCTATGGCTTTCACAGTaGTGGCTGTGTTGTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PLLHRAFTVQYVAGCSFPLWLSQ*WLCCPV Trigger: AACTGGACAACACAGCCAGCACTGTGAAAGCCATAG...AGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCTCCCACCTGACAAAACGATGTGCAGGAGACTATCCATAGTGGTCACAATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PDLPPDKTMCRRLSIVVTILKFY*ALSVQR Trigger: CCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGAT...TGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | ATGCAGGGAATGACAATAGCTATGGCTTTCACAGTGCTGGCTGTGTaGTCCAGTTTGATGACAATGTCTACATCATCTGGTGGGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: MQGMTIAMAFTVLAV*SSLMTMSTSSGGLS Trigger: ACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCATTCCCTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCTCCCACCTGACAAAACGATGTGCAGGAGACTATCCATAGTGGTCACATCTCTTTCCCAGAAATaGGCTCAGATTTCAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PDLPPDKTMCRRLSIVVTSLSQK*AQISEG Trigger: TCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGA...TGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCTCCCACCTGACAAAACGATGTGCAGGAGACTATCCATAGTGGTCACACATCTTCCCACCATATaGCAGAATCAATACCATGAG | + |
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Preference number: 2 (lower is better) Translates to: PDLPPDKTMCRRLSIVVTHLPTI*QNQYHE Trigger: CTCATGGTATTGATTCTGCCATATGGTGGGAAGATG...TGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCTTTATCTCGGTCTGTTaGTCCATCACAGCCCATAAA | + |
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Preference number: 2 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVFISVC*SITAHK Trigger: TTTATGGGCTGTGATGGACCAACAGACCGAGATAAA...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAATTACAGTACAGTATGTaGCGGGGTGTTCCTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQLQYSM*RGVPFL Trigger: GAGGAAAGGAACACCCCGCCACATACTGTACTGTAA...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | ATCCAGTGGAGAAGTGACACCAGATTTCCTTCAGTTTGTGCCAGTTaGCAAGTTAAAGGTCAAAGGGCAAAGACACAGAACAGGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IQWRSDTRFPSVCAS*QVKGQRAKTQNRAL Trigger: AAGAGCCCTGTTCTGTGTCTTTGCCCTTTGACCTTTAACTTGCAAACTGGCACAAACTGAAGGAAATCTGGTGTCACTTCTCCACTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR CAA 90 bp | AGGTTGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTTGCAGGTTaGGAGGTTCAGCCCATTATCATCTGTGTAGAGCATGGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RLKSCVFEHPVFVAG*EVQPIIICVEHGSV Trigger: GACACTGCCATGCTCTACACAGATGATAATGGGCTGAACCTCCAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | GGGGATTCCATTCCCAAGGGTAATCAAGTCATGAGGGTAACCAGGTaGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTTGCAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GDSIPKGNQVMRVTR*KSCVFEHPVFVAGL Trigger: CAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCTGGTTACCCTCATGACTTGATTACCCTTGGGAATGGAATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTGAACAGCAGATACTGTaGATCACGGAAGCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KNITMILGQEAGGGSEIFEQQIL*ITEASP Trigger: TGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTC...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR CAA 90 bp | ATGACAATAGCTATGGCTTTCACAGTGCTGGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCATCTGGTGGGCTGAGTCCTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: MTIAMAFTVLAVLSS*MTMSTSSGGLSPSL Trigger: TAAAGAAGGACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGTTGTTTGTTGGAAAATaGCTGTCCCAACAGTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKLFVGK*LSQQSS Trigger: GCTAGACTGTTGGGACAGTCATTTTCCAACAAACAA...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGAAGAGTTGTGTCTTTaGACACCCAGTATTTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKEELCL*TPSICC Trigger: GCAACAAATACTGGGTGTTCAAAGACACAACTCTTC...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAATATTTCCACTCATGTaGAGGACCAGCAACCATCTA | + |
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Preference number: 2 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQIFPLM*RTSNHL Trigger: TAGATGGTTGCTGGTCCTGCACATGAGTGGAAATAT...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACAGACACAATACTTCTTaGTCTGCTTTGCGCGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYRHNTS*SALRGV Trigger: TACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCT...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KNITMILGQEAGGGSEIFILKFY*ALSVQR Trigger: CCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGAT...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTGATGGCTTTCCCTTTTaGCCAGTTCTACAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: KNITMILGQEAGGGSEIFDGFPF*PVLQMT Trigger: GGTCATTTGTAGAACTGGCCAAAAGGGAAAGCCATC...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGCTGCAGATCCACTACTaGAACTCTCTCTCCACTCGA | + |
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Preference number: 2 (lower is better) Translates to: IKVLKGLNPLTSKHCINRLQIHY*NSLSTR Trigger: TCGAGTGGAGAGAGAGTTTCAGTAGTGGATCTGCAG...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| 3UTR-3UTR TCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAACATCATCTGGTGGGCTaGGTCCTTCTTTATCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: NSITALVLNLKLPQTPRKHHLVG*VLLYLG Trigger: ACCGAGATAAAGAAGGACTCAGCCCACCAGATGATG...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACTCTCTTTCCCAGAAATaGGCTCAGATTTCAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYSLSQK*AQISEG Trigger: TCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGA...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR GCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTGAACAGCAGATACTGTaGATCACGGAAGCTTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: NIDMILLCRSHENDNTAVEQQIL*ITEASP Trigger: TGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTC...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGCCTGACTCTGTAAGCTaGTCCGATAGTTCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IKVLKGLNPLTSKHCINRPDSVS*SDSSQR Trigger: CCTTTGAGAACTATCGGACCAGCTTACAGAGTCAGG...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAACACCATTCTGCCAGGCTTTTCAGCATGCCACCCATGATTAAAAATGTCTGGGATTGTAAGGTATaGTTTACAAATCTGAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: RKHHSARLFSMPPMIKNVWDCKV*FTNLNF Trigger: GAAGTTCAGATTTGTAAAGCATACCTTACAATCCCA...GACATTTTTAATCATGGGTGGCATGCTGAAAAGCCTGGCAGAATGGTGTTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 90 bp | TCTATATTTCCTCTTCTTCAGTTAATCCTGAAATTTTACTGGGCATaGAGCGTGCAGAGGAAAGGCCTAGAACTGAATGACAAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SIFPLLQLILKFYWA*SVQRKGLELNDKER Trigger: TCTTTCTTTGTCATTCAGTTCTAGGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGATTAACTGAAGAAGAGGAAATATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGCACTCAACAATGGGATaGTTTGGTGTCTCTTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DPYKITITFFPSETQYFLHSTMG*FGVSWL Trigger: AAGCCAAGAGACACCAAAGCATCCCATTGTTGAGTG...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR CCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGGTCTACATCATCTGGTaGGCTGAGTCCTTCTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: DPYKITITFFPSETQYFLVYIIW*AESFFI Trigger: GATAAAGAAGGACTCAGCCCACCAGATGATGTAGAC...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR CAA 90 bp | AGGGCTCTTCAAGGAACATTTTCACAGAAGACAGTGTTTAAGTTGTaGTTAATGACAGTCAACAGATCAATATCAAGTTCAAGGCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RALQGTFSQKTVFKL*LMTVNRSISSSRQA Trigger: AGCTTGCCTTGAACTTGATATTGATCTGTTGACTGTCATTAACAACAACTTAAACACTGTCTTCTGTGAAAATGTTCCTTGAAGAGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR GCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTCCAAGCAATGCTAACTaGATATTTTATGGCAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: NIDMILLCRSHENDNTAVPSNAN*IFYGKQ Trigger: CTGTTTGCCATAAAATATGCAGTTAGCATTGCTTGG...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAATATTGCAGATATTTTaGCCCCTTGTTTGTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NSITALVLNLKLPQTPRKILQIF*PLVCWK Trigger: TTTCCAACAAACAAGGGGCCAAAATATCTGCAATAT...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGTTGCCAGAAAAGTTTTaGCAAGTCACATCATCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: DPYKITITFFPSETQYFLLPEKF*QVTSSL Trigger: CAACGATGATGTGACTTGCCAAAACTTTTCTGGCAA...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGGGTAACCAGGGTCCATaGTTTTCATTTCTTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: DPYKITITFFPSETQYFLGNQGP*FSFLHY Trigger: ATAGTGAAGAAATGAAAACCATGGACCCTGGTTACC...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR CCA 72 bp | TGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATaGACGGCCTGGGACAAAGGCCTAACACAACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CSALRGVLLTDQ*TAWDKGLTQLG Trigger: TCCCAGTTGTGTTAGGCCTTTGTCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAAAATTTTACTGGGCATaGAGCGTGCAGAGGAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLLCFARSIADRPMDGLGKFYWA*SVQRKG Trigger: GCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTT...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCA | + |
|
Preference number: 3 (lower is better) Translates to: FLLCFARSIADRPMDGLGAVLSS*MTMSTS Trigger: TGATGTAGACATTGTCATCAAACTGGACAACACAGC...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR CCA 72 bp | ATCTGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTaGTCCATCACAGCCCATAAAGTCCTTGAGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: IWWAESFFISVC*SITAHKVLEDG Trigger: TCCATCCTCAAGGACTTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCTTGGCCCCTTGTTTGTaGGAAAATGACTGTCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVLAPCL*ENDCPN Trigger: GTTGGGACAGTCATTTTCCAACAAACAAGGGGCCAA...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR TCA 72 bp | AGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTaGCAAAACGATGTGCAGGAGACTATCCATAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLASCMCSRSPT*QNDVQETIHSG Trigger: ACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR GCA 72 bp | GCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTaGAGGAGACTATCCATAGTGGTCACAGAGCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: ACVPDLPPDKTM*RRLSIVVTELS Trigger: AGATAGCTCTGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CCA 72 bp | ACCCACTCTTGCATAGAGCGTTTACAGTACAGTATGTaGCGGGGTGTTCCTTTCCTCTTGAACTGGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: THSCIERLQYSM*RGVPFLLNWNT Trigger: TGTGTTCCAGTTCAAGAGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAGAGACACAATACTTCTaGCTCTGCTTTGCGCGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQETQYF*LCFARS Trigger: ACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTC...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTACAGTGCTGGCTGTGTaGTCCAGTTTGATGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: QQSSILHVFQISHLTKRCTVLAV*SSLMTM Trigger: CATTGTCATCAAACTGGACAACACAGCCAGCACTGT...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR GCA 72 bp | ACCTTCTTTCCTTCAGAGACACAATACTTCTTGCTCTaGTTTGCGCGGAGTATTGCTGACAGACCAATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TFFPSETQYFLL*FARSIADRPMD Trigger: GTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR GCA 72 bp | CCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTaGTCTGCTTTGCGCGGAGTATTGCTGACAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PSPSFLQRHNTS*SALRGVLLTDQ Trigger: TTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CCA 72 bp | GTTGTCCAGTTTGATGACAATGTCTACATCATCTGGTaGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVQFDDNVYIIW*AESFFISVCWS Trigger: GGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR TCA 72 bp | TGCCAGAAGCCACACCAACCCTTTGAGAACTATGGCTaGCATGCGATAGGTAATGCATTGGTAGGTATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CQKPHQPFENYG*HAIGNALVGIH Trigger: ATGAATACCTACCAATGCATTACCTATCGCATGTCAGCCATAGTTCTCAAAGGGTTGGTGTGGCTTCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CCA 72 bp | TGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTaGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CVVQFDDNVYII*WAESFFISVCW Trigger: CCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCTGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTGGTGGGCTGAGATAACAGCTCTTGTCTaGAATCTCAAGTTACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: AGCVVQFDDNVYIIWWAEITALV*NLKLPQ Trigger: TTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTAT...CTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGAAGGCTGTTACTATATaGCAGATATTTTGGCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FWVRRQEGVQKYFKTTERKAVTI*QIFWPL Trigger: AAGGGGCCAAAATATCTGCAATATAGTAACAGCCTT...CCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| 3UTR-3UTR CAA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTTTTGCCAGAAAAGTTTaGGCAAGTCACATCATCGTT | + |
|
Preference number: 3 (lower is better) Translates to: QQSSILHVFQISHLTKRCFARKV*ASHIIV Trigger: AACGATGATGTGACTTGCCAAAACTTTTCTGGCAAA...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR TCA 72 bp | AGTCATGAGGGTAACCAGGTTGAAGAGTTGTGTCTTTaGACACCCAGTATTTGTTGCAGGTTTGGAGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SHEGNQVEELCL*TPSICCRFGGS Trigger: TGAACCTCCAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCTGGTTACCCTCATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTGCGATAGGTAATGCATaGGTAGGTATTCATGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: KNITMILGQEAGGGSEIFAIGNA*VGIHAT Trigger: AGTTGCATGAATACCTACCAATGCATTACCTATCGC...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAACACCATTCTGCCAGGCTTTTCAGCATGCCACCCATGATTAAAAATGTCAAGGCAAGCTGTTCATaGTTTCAAAAGCTAATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RKHHSARLFSMPPMIKNVKASCS*FQKLIP Trigger: GGGGATTAGCTTTTGAAACAATGAACAGCTTGCCTT...GACATTTTTAATCATGGGTGGCATGCTGAAAAGCCTGGCAGAATGGTGTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CCA 72 bp | ATATTTCCTCTTCTTCAGTTAATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGGAAAGGCCTAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: IFPLLQLILKFY*ALSVQRKGLEL Trigger: CAGTTCTAGGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGATTAACTGAAGAAGAGGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CCA 72 bp | TCCATCACAGCCCATAAAGTCCTTGAGGATGGATCTTaGATAACCAGGTTCTACTTTGAGTATCTGATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SITAHKVLEDGS*ITRFYFEYLIV Trigger: AACAATCAGATACTCAAAGTAGAACCTGGTTATCCAAGATCCATCCTCAAGGACTTTATGGGCTGTGATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTATTGGCCCCTTGTTTGTaGGAAAATGACTGTCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YAVLSVIKELHGIVRYALLAPCL*ENDCPN Trigger: GTTGGGACAGTCATTTTCCAACAAACAAGGGGCCAA...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR-3UTR CAA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTATAACAGCTCTTGTCTaGAATCTCAAGTTACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: NIDMILLCRSHENDNTAVITALV*NLKLPQ Trigger: TTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTAT...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGTATATTGCAGATATTTaGGCCCCTTGTTTGTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IKVLKGLNPLTSKHCINRYIADI*APCLLE Trigger: TTCCAACAAACAAGGGGCCAAAATATCTGCAATATA...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR TCA 72 bp | GTTGAAGTACAGTCTGCATTGCATAATGTGGTACTATaGAGCCATGAATCCATTTCTCTTTCCTGTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VEVQSALHNVVL*SHESISLSCFF Trigger: AAAGAAACAGGAAAGAGAAATGGATTCATGGCTTCATAGTACCACATTATGCAATGCAGACTGTACTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR TCA 90 bp | CCCATTATCATCTGTGTAGAGCATGGCAGTGTCCAGACAGGCATGGTGCAGGAGTGCAGAGCGCAGCACTaGCATTCTGGGGTCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PIIICVEHGSVQTGMVQECRAQH*HSGVSR Trigger: CCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCA...CTCCTGCACCATGCCTGTCTGGACACTGCCATGCTCTACACAGATGATAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTGCATAGAGCGTTTACAGTACAGTATGTGGCGGGGTGTTCCTTTCCTAGGAGGGTCTGCCAGTaGGAGGCCGAGGAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLHRAFTVQYVAGCSFPRRVCQ*EAEEVW Trigger: CCAAACCTCCTCGGCCTCCCACTGGCAGACCCTCCT...AGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| 3UTR CAA 72 bp | AGACACAATACTTCTTGCTCTGCTTTGCGCGGAGTATaGCTGACAGACCAATGGACGGCCTGGGACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHNTSCSALRGV*LTDQWTAWDKG Trigger: GCCTTTGTCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAAGTATTGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGAGCATGGCAGTGTCCAGACAGGCATGGTGCAGGAGGAGCTGAGAGTTCTAGGGAAATAAGCATGTaGCAAAAATCCTCCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CRAWQCPDRHGAGGAESSREISM*QKSSLP Trigger: GGGGAGGGAGGATTTTTGGCACATGCTTATTTCCCT...AGAACTCTCAGCTCCTCCTGCACCATGCCTGTCTGGACACTGCCATGCTCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCTTGCATAGAGCGTTTACAGTACAGTATGTGGCGGGGTGTTCCTTTCCTGAGCTGCCTCTTGTCTaGTCTGGTACACCGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLHRAFTVQYVAGCSFPELPLV*SGTPHR Trigger: TCGATGCGGTGTACCAGACCAGACAAGAGGCAGCTC...AGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGAGTTGGGTTTGGCTCCTaGATAGGAGGGTCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQSSILHVFQISHLTKRVGFGS*IGGSAS Trigger: ACTGGCAGACCCTCCTATCCAGGAGCCAAACCCAAC...TCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTTGCAGAGCGCAGCACTaGCATTCTGGGGTCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNITMILGQEAGGGSEIFCRAQH*HSGVSR Trigger: CCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCA...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGTGGACGAAAGCTCCCTaGGGTGATTCAGGGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKWTKAP*GDSGIP Trigger: GGGGATCCCTGAATCACCTCAGGGAGCTTTCGTCCA...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCATGTCTCCTTGGGTCTaGTGGAGGAACAGATCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVMSPWV*WRNRSV Trigger: CACCGATCTGTTCCTCCAGCAGACCCAAGGAGACAT...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCCTGGATAGGAGGGTCTaGCAGTGGGAGGCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTADTVHHGSFSMIIFPLLDRRV*QWEAEE Trigger: CTCCTCGGCCTCCCACTGGCAGACCCTCCTATCCAG...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCAGGAGGGTCTGCCAGTaGGAGGCCGAGGAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTADTVHHGSFSMIIFPLRRVCQ*EAEEVW Trigger: CCAAACCTCCTCGGCCTCCCACTGGCAGACCCTCCT...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCACCAAACCTCCACATTaGAATACTGCTCCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVTKPPH*NTAPFR Trigger: GCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGT...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGCCTCTTGTCTGGTCTaGTACACCGCATCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKASCLV*YTASRL Trigger: AAGCCTCGATGCGGTGTACCAGACCAGACAAGAGGC...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTACCAAACCTCCACATTaGAATACTGCTCCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QQSSILHVFQISHLTKRCTKPPH*NTAPFR Trigger: GCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGT...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGCCCATAAAAGAGGAGTTACATTCTaGCACACATCAAAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: WWAESFFISVCWSITAHKRGVTF*HTSKAR Trigger: CCGTGCCTTTGATGTGTGGCAGAATGTAACTCCTCT...TTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYAALTF*GQSVEG Trigger: ACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGC...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCTTACAGTACAGTATGTaGCGGGGTGTTCCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVLQYSM*RGVPFL Trigger: GAGGAAAGGAACACCCCGCCACATACTGTACTGTAA...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 72 bp | GCTATGGCTTTCACAGTGCTGGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCATCTGGTGGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMAFTVLAVLSS*MTMSTSSGGLS Trigger: ACTCAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGAAACACACCCGAACGATaGACGAAATCCAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQSSILHVFQISHLTKRNTPER*TKSNLL Trigger: AAGAAGGTTGGATTTCGTGCATCGTTCGGGTGTGTT...TCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCAGTGTCCAGACAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTTATCCACATCACGTTTaGCGTTTTCTAGTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGSVQTGMVQEELRVLHLYPHHV*RFLVHC Trigger: ACAGTGAACTAGAAAACGGCAAACGTGATGTGGATA...AAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCTGTCTGGACACTGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCGCCTCTTGTCTGGTCTaGTACACCGCATCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTADTVHHGSFSMIIFPLASCLV*YTASRL Trigger: AAGCCTCGATGCGGTGTACCAGACCAGACAAGAGGC...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTAAACTGCATCAATACTaGGAGGAAGGCCCCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNITMILGQEAGGGSEIFKLHQY*EEGPAR Trigger: TCTGGCGGGGCCTTCCTCCCAGTATTGATGCAGTTT...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCATCATCTGGTGGGCTaGGTCCTTCTTTATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNITMILGQEAGGGSEIFHHLVG*VLLYLG Trigger: ACCGAGATAAAGAAGGACTCAGCCCACCAGATGATG...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR GCA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTTCCACATTGAAATACTaGTCCGTTCCGCAGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQSSILHVFQISHLTKRCSTLKY*SVPQTV Trigger: TACAGTCTGCGGAACGGAGCAGTATTTCAATGTGGA...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGGCAGCTAGAGCTGACTaGATGGTCTCTGCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IKVLKGLNPLTSKHCINRAARAD*MVSAER Trigger: GCGCTCTGCAGAGACCATGCAGTCAGCTCTAGCTGC...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR GCA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTACTGGATAGGAGGGTCTaGCAGTGGGAGGCCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YAVLSVIKELHGIVRYALLDRRV*QWEAEE Trigger: CTCCTCGGCCTCCCACTGGCAGACCCTCCTATCCAG...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAACTATGGCTTTCACAGTaGTGGCTGTGTTGTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQLWLSQ*WLCCPV Trigger: AACTGGACAACACAGCCAGCACTGTGAAAGCCATAG...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR CCA 90 bp | ACATCATCTGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGAGGGATCTTGTCAGGTaGACCATATATCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSGGLSPSLSRSVGPSQRDLVR*TIYLLD Trigger: ATCCAGAAGATATATGGTCCACCTGACAAGATCCCT...CTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCAGATGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCCATCTTCCCACCATATaGCAGAATCAATACCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVHLPTI*QNQYHE Trigger: CTCATGGTATTGATTCTGCCATATGGTGGGAAGATG...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR TCA 90 bp | CTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGCCCATAAAGTCCTTGAAAACCACTGGTCCTTaGAAACAAACATCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPSLSRSVGPSQPIKSLKTTGP*KQTSPF Trigger: GAAGGGAGATGTTTGTTTTCAAGGACCAGTGGTTTT...CAAGGACTTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| CDS-3UTR TCA 90 bp | TCTCTTTCTTTCTCTTTCCCAGAAATGGGCTCAGATTTCAGAAGGAAATGTATTTCCCCTTCCAGATGGTaGTGGGCTTGGGGTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSFPEMGSDFRRKCISPSRW*WAWGNQ Trigger: CTGGTTACCCCAAGCCCATCACCATCTGGAAGGGGA...AATACATTTCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGAAAGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR TCA 90 bp | TTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGGTGTTCCTTTCCTCTTaGACTGGAACACAGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FWVRRQEGVQKYFKTTERVFLSS*TGTQCK Trigger: TTTACACTGTGTTCCAGTTCAAGAGGAAAGGAACAC...CCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR GCA 90 bp | CCAGATCTCCCACCTGACAAAACGATGTGCAGGAGACTATCCATAGTGGTCACAATCCAAAGCAAGGTTTaGAAGAAAAACACACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PDLPPDKTMCRRLSIVVTIQSKV*KKNTPE Trigger: TTCGGGTGTGTTTTTCTTGCAAACCTTGCTTTGGAT...TGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR GCA 90 bp | TGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGCCCATAAAATCCAAAGCAAGGTTTaGAAGAAAAACACACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WWAESFFISVCWSITAHKIQSKV*KKNTPE Trigger: TTCGGGTGTGTTTTTCTTGCAAACCTTGCTTTGGAT...TTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| CDS-3UTR GCA 90 bp | TCTCTTTCTTTCTCTTTCCCAGAAATGGGCTCAGATTTCAGAAGGAAATGTATTGCAGCTAGAGCTGACTaGATGGTCTCTGCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSFPEMGSDFRRKCIAARAD*MVSAER Trigger: GCGCTCTGCAGAGACCATGCAGTCAGCTCTAGCTGC...AATACATTTCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGAAAGAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCTCTGGGGTCAGTCGGTaGAAGGTAGCCGTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTADTVHHGSFSMIIFPLSGVSR*KVAVFL Trigger: CAAAAATACGGCTACCTTCCACCGACTGACCCCAGA...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | CCACTCTTGCATAGAGCGTTTACAGTACAGTATGTGGCGGGGTGTTCCTTTCCTATTTCCCAGTGTCCATaGCTCATCAGAATCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PLLHRAFTVQYVAGCSFPISQCP*LIRIKM Trigger: CATTTTGATTCTGATGAGCCATGGACACTGGGAAAT...AGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTAGGGATCTTGTCAGGTaGACCATATATCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQSSILHVFQISHLTKRCRDLVR*TIYLLD Trigger: ATCCAGAAGATATATGGTCCACCTGACAAGATCCCT...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | CAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGACCTGTCATGTCTCCTTaGGTCTGCTGGAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHNSSCLESQVTTNSQKRPVMSP*VCWRNR Trigger: TCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGG...TCTTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGTTGGGTTTGGCTCCTaGATAGGAGGGTCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSITALVLNLKLPQTPRKVGFGS*IGGSAS Trigger: ACTGGCAGACCCTCCTATCCAGGAGCCAAACCCAAC...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | TTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGACTCGCCAAAACCACTaGTCCTTGAAAACAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: FWVRRQEGVQKYFKTTERTRQNH*SLKTNI Trigger: GATGTTTGTTTTCAAGGACCAGTGGTTTTGGCGAGT...CCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGCTGAGTCCTTCTTTATCTCGGTCTGTTGGTCCATCACAGCCCATAAAGTAAGTAATTTGCATTaGGTATCCATCCATCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWAESFFISVCWSITAHKVSNLH*VSIHHP Trigger: AGGGTGATGGATGGATACCCAATGCAAATTACTTAC...TTTATGGGCTGTGATGGACCAACAGACCGAGATAAAGAAGGACTCAGCCCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGTAATCAAGTCATGAGGGTAACCAGGTTGAAGAGTTGTGTCTTTGAACGTTTCCATCATGATTaGGATTTCCCAGTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PKGNQVMRVTRLKSCVFERFHHD*DFPVSM Trigger: CATGGACACTGGGAAATCCCAATCATGATGGAAACG...TTCAAAGACACAACTCTTCAACCTGGTTACCCTCATGACTTGATTACCCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAAAACTGCATCAATACTaGGAGGAAGGCCCCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSITALVLNLKLPQTPRKKLHQY*EEGPAR Trigger: TCTGGCGGGGCCTTCCTCCCAGTATTGATGCAGTTT...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CAA 72 bp | CCTCTTCTTCAGTTAATCCTGAAATTTTACTGGGCATaGAGCGTGCAGAGGAAAGGCCTAGAACTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLQLILKFYWA*SVQRKGLELND Trigger: GTCATTCAGTTCTAGGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGATTAACTGAAGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTAATACCTGTCACCTTTaGAGAAATAGGTTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQSSILHVFQISHLTKRCNTCHL*RNRFCQ Trigger: TTGGCAAAACCTATTTCTTCAAAGGTGACAGGTATT...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR GCA 90 bp | AGGTTGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTTGCAGGTTTGGAGGTTAACACACCCGAACGATaGACGAAATCCAACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLKSCVFEHPVFVAGLEVNTPER*TKSNLL Trigger: AAGAAGGTTGGATTTCGTGCATCGTTCGGGTGTGTT...AACCTCCAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTTCTGGGGTCAGTCGGTaGAAGGTAGCCGTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NIDMILLCRSHENDNTAVSGVSR*KVAVFL Trigger: CAAAAATACGGCTACCTTCCACCGACTGACCCCAGA...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPYKITITFFPSETQYFLAALTF*GQSVEG Trigger: ACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGC...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTCATAGAACTGCTGCATaGCAGCTAGAGCTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIDMILLCRSHENDNTAVHRTAA*QLELTA Trigger: TGCAGTCAGCTCTAGCTGCCATGCAGCAGTTCTATG...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTAGAGCTGCCTCTTGTCTaGTCTGGTACACCGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: YAVLSVIKELHGIVRYALELPLV*SGTPHR Trigger: TCGATGCGGTGTACCAGACCAGACAAGAGGCAGCTC...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGACATGTACTGATAAAATaGGGCCATGATAGCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHNSSCLESQVTTNSQKRHVLIK*GHDSGG Trigger: CCCACCGCTATCATGGCCCCATTTTATCAGTACATG...TCTTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTCTTTCTCTTTCCCAGAAATGGGCTCAGATTTCAGAAGGAAATGTATTCCTGTCATGTCTCCTTaGGTCTGCTGGAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSFPEMGSDFRRKCIPVMSP*VCWRNR Trigger: TCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGG...AATACATTTCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGAAAGAAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGGAGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTACTCGCCAAAACCACTaGTCCTTGAAAACAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRYCASRKLLHDYITRQNH*SLKTNI Trigger: GATGTTTGTTTTCAAGGACCAGTGGTTTTGGCGAGT...AATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCTCCAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CAA 72 bp | AGAAGTGACACCAGATTTCCTTCAGTTTGTGCCAGTTaGCAAGTTAAAGGTCAAAGGGCAAAGACACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSDTRFPSVCAS*QVKGQRAKTQN Trigger: GTTCTGTGTCTTTGCCCTTTGACCTTTAACTTGCAAACTGGCACAAACTGAAGGAAATCTGGTGTCACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 72 bp | AGTTGTGTCTTTGAACACCCAGTATTTGTTGCAGGTTaGGAGGTTCAGCCCATTATCATCTGTGTAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCVFEHPVFVAG*EVQPIIICVEH Trigger: ATGCTCTACACAGATGATAATGGGCTGAACCTCCAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR TCA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCGAAGAGTTGTGTCTTTaGACACCCAGTATTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTADTVHHGSFSMIIFPLEELCL*TPSICC Trigger: GCAACAAATACTGGGTGTTCAAAGACACAACTCTTC...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR GCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTTATCCACATCACGTTTaGCGTTTTCTAGTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNITMILGQEAGGGSEIFYPHHV*RFLVHC Trigger: ACAGTGAACTAGAAAACGGCAAACGTGATGTGGATA...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTAGGGAAATAAGCATGTaGCAAAAATCCTCCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NIDMILLCRSHENDNTAVREISM*QKSSLP Trigger: GGGGAGGGAGGATTTTTGGCACATGCTTATTTCCCT...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR GCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGATGTCTCCTTGGGTCTaGTGGAGGAACAGATCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPYKITITFFPSETQYFLMSPWV*WRNRSV Trigger: CACCGATCTGTTCCTCCAGCAGACCCAAGGAGACAT...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACATCACAATGATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTGGACCATATATCTTCTaGATGCCCTGTAAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KNITMILGQEAGGGSEIFGPYIF*MPCKSS Trigger: TGATGATTTACAGGGCATCCAGAAGATATATGGTCC...AAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAATCATTGTGATGTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| 3UTR CAA 72 bp | ATTCCCAAGGGTAATCAAGTCATGAGGGTAACCAGGTaGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPKGNQVMRVTR*KSCVFEHPVFV Trigger: AACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCTGGTTACCCTCATGACTTGATTACCCTTGGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGCGTTTCCATCATGATTaGGATTTCCCAGTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IKVLKGLNPLTSKHCINRRFHHD*DFPVSM Trigger: CATGGACACTGGGAAATCCCAATCATGATGGAAACG...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | AGGTTGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTTGCAGGTTTGGAGGTTGGACCATATATCTTCTaGATGCCCTGTAAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLKSCVFEHPVFVAGLEVGPYIF*MPCKSS Trigger: TGATGATTTACAGGGCATCCAGAAGATATATGGTCC...AACCTCCAAACCTGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGGTCTACATCATCTGGTaGGCTGAGTCCTTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IKVLKGLNPLTSKHCINRVYIIW*AESFFI Trigger: GATAAAGAAGGACTCAGCCCACCAGATGATGTAGAC...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR TCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAAAAACCACTGGTCCTTaGAAACAAACATCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSITALVLNLKLPQTPRKKTTGP*KQTSPF Trigger: GAAGGGAGATGTTTGTTTTCAAGGACCAGTGGTTTT...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTAAGAGGAGTTACATTCTaGCACACATCAAAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: YAVLSVIKELHGIVRYALRGVTF*HTSKAR Trigger: CCGTGCCTTTGATGTGTGGCAGAATGTAACTCCTCT...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGCATGTACTGATAAAATaGGGCCATGATAGCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPYKITITFFPSETQYFLHVLIK*GHDSGG Trigger: CCCACCGCTATCATGGCCCCATTTTATCAGTACATG...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAATTTATCTCGGTCTGTTaGTCCATCACAGCCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSITALVLNLKLPQTPRKFISVC*SITAHK Trigger: TTTATGGGCTGTGATGGACCAACAGACCGAGATAAA...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | ATCAAGGTCCTGAAAGGATTAAACCCTCTAACAAGCAAACACTGTATAAACAGGATTTCCCAGTGTCCATaGCTCATCAGAATCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IKVLKGLNPLTSKHCINRISQCP*LIRIKM Trigger: CATTTTGATTCTGATGAGCCATGGACACTGGGAAAT...CCTGTTTATACAGTGTTTGCTTGTTAGAGGGTTTAATCCTTTCAGGACCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGGTAACCAGGGTCCATaGTTTTCATTTCTTCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSITALVLNLKLPQTPRKGNQGP*FSFLHY Trigger: ATAGTGAAGAAATGAAAACCATGGACCCTGGTTACC...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 72 bp | AAAGTTCAGTGCATGTTGATAGAGTTCCTCGATGATTaGCACATGTCCCAAAAAGGTTACAGTTACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KVQCMLIEFLDD*HMSQKGYSYSL Trigger: AAGTGAGTAACTGTAACCTTTTTGGGACATGTGCAAATCATCGAGGAACTCTATCAACATGCACTGAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAAATCATGAATGTCTTGTTGAAGTACAGTCTGCATTGCATAATGTGGTACAAATCGTTTCCATCATaGTTGGGATTTCCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKIMNVLLKYSLHCIMWYKSFPS*LGFPSV Trigger: GACACTGGGAAATCCCAATCATGATGGAAACGATTT...GTACCACATTATGCAATGCAGACTGTACTTCAACAAGACATTCATGATTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | TTCAAAATCATGAATGTCTTGTTGAAGTACAGTCTGCATTGCATAATGTGGTACAATGTCTACATCATCTaGTGGGCTGAGTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKIMNVLLKYSLHCIMWYNVYII*WAESFF Trigger: AAAGAAGGACTCAGCCCACCAGATGATGTAGACATT...GTACCACATTATGCAATGCAGACTGTACTTCAACAAGACATTCATGATTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 72 bp | GTTCAGAAATATTTCAAAACAACCGAAAGGTCCTGTTaGAACACAGCTATGAGTATGGAGGTGATGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQKYFKTTERSC*NTAMSMEVMIH Trigger: ATGTATCATCACCTCCATACTCATAGCTGTGTTCAAACAGGACCTTTCGGTTGTTTTGAAATATTTCTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR GCA 90 bp | AATATTGATATGATCCTGCTCTGCAGGTCACATGAGAATGACAATACTGCTGTTGTGATATGTTTGTGTTaGCATTTCTGTCCAGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIDMILLCRSHENDNTAVVICLC*HFCPVN Trigger: ATTAACTGGACAGAAATGGCAACACAAACATATCAC...AACAGCAGTATTGTCATTCTCATGTGACCTGCAGAGCAGGATCATATCAATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR CCA 90 bp | TTCAAAATCATGAATGTCTTGTTGAAGTACAGTCTGCATTGCATAATGTGGTACGTAAGTAATTTGCATTaGGTATCCATCCATCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKIMNVLLKYSLHCIMWYVSNLH*VSIHHP Trigger: AGGGTGATGGATGGATACCCAATGCAAATTACTTAC...GTACCACATTATGCAATGCAGACTGTACTTCAACAAGACATTCATGATTTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTACTTGAGGATGGATCTTaGATAACCAGGTTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YAVLSVIKELHGIVRYALLEDGS*ITRFYF Trigger: AAAGTAGAACCTGGTTATCCAAGATCCATCCTCAAG...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| 3UTR CAA 72 bp | GTGTTATTTACCCTCACATTCAAAATCATGAATGTCTaGTTGAAGTACAGTCTGCATTGCATAATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLFTLTFKIMNV*LKYSLHCIMWY Trigger: GTACCACATTATGCAATGCAGACTGTACTTCAACAAGACATTCATGATTTTGAATGTGAGGGTAAATAACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTACTGTCAGTCATTAAAGAGTTACATGGGATTGTAAGGTATGCTTTAGTGATATGTTTGTGTTaGCATTTCTGTCCAGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YAVLSVIKELHGIVRYALVICLC*HFCPVN Trigger: ATTAACTGGACAGAAATGGCAACACAAACATATCAC...TAAAGCATACCTTACAATCCCATGTAACTCTTTAATGACTGACAGTACTGCATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CCA 90 bp | TGGCTCCTGGATAGGAGGGTCTGCCAGTGGGAGGCCGAGGAGGTTTaGGCCTGTCATGTCTCCTTGGGTCTGCTGGAGGAACAGATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLLDRRVCQWEAEEV*ACHVSLGLLEEQIG Trigger: ACCGATCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGCCCAAACCTCCTCGGCCTCCCACTGGCAGACCCTCCTATCCAGGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAATAGCGGTGGGGTCGTaGGAATGTTCCAGTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLCFARSIADRPMDGLGIAVGS*ECSSPR Trigger: TCTAGGACTGGAACATTCCAACGACCCCACCGCTAT...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS CCA 90 bp | CTAGAGCTGACTGCATGGTCTCTGCAGAGCGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGTAGCCGTATTTTTGTAACCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LELTAWSLQSAALTF*GQSVEGSRIFVTKP Trigger: AGGTTTGGTTACAAAAATACGGCTACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGTCAGCTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000183662.8 |
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| CDS CCA 90 bp | CTAGAGCTGACTGCATGGTCTCTGCAGAGCGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGTAGCCGTATTTTTGTAACCAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: LELTAWSLQSAALTF*GQSVEGSRIFVTKR Trigger: TCGTTTGGTTACAAAAATACGGCTACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGTCAGCTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149353.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGAAACCAAACCTCCACATaGAAATACTGCTCCGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLLCFARSIADRPMDGLGNQTST*KYCSVP Trigger: CGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTT...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTCAAAGGCACGGCGAATaGCTCTCCGGGTCTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QQSSILHVFQISHLTKRCQRHGE*LSGSQD Trigger: ATCCTGAGACCCGGAGAGCAATTCGCCGTGCCTTTG...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGATGTGCCTGTCATGTCTCCTaGGGTCTGCTGGAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: QQSSILHVFQISHLTKRCACHVS*GLLEEQ Trigger: CTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGC...ACATCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAGGAGGCCGAGGAGGTTaGGGCCTGTCATGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQGGRGG*GLSCLL Trigger: AAGGAGACATGACAGGCCCAAACCTCCTCGGCCTCC...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTATCATCTGTGTAGAGCATGGCAGTGTCCAGACAGGCATGGTGCAGGAGAACCAAACCTCCACATaGAAATACTGCTCCGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PIIICVEHGSVQTGMVQENQTST*KYCSVP Trigger: CGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTT...CTCCTGCACCATGCCTGTCTGGACACTGCCATGCTCTACACAGATGATAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGCAAAGGCACGGCGAATaGCTCTCCGGGTCTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKQRHGE*LSGSQD Trigger: ATCCTGAGACCCGGAGAGCAATTCGCCGTGCCTTTG...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGCATGGCAGTGTCCAGACAGGCATGGTGCAGGAGGAGCTGAGAGTTCTATATCCACATCACGTTaGCCGTTTTCTAGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CRAWQCPDRHGAGGAESSISTSR*PFSSSL Trigger: CAGTGAACTAGAAAACGGCAAACGTGATGTGGATAT...AGAACTCTCAGCTCCTCCTGCACCATGCCTGTCTGGACACTGCCATGCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGGTCGTAGGTGGAGGGATCTaGTCAGGTGGACCATATATC | + |
|
Preference number: 5 (lower is better) Translates to: LGQEAGGGSEIFQNNRKVVGGGI*SGGPYI Trigger: GATATATGGTCCACCTGACAAGATCCCTCCACCTAC...GACCTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS CCA 90 bp | GCGCTTTCGACGAATGTTGAATTTAGAGCTGCCTCTTGTCTGGTCTaGTACACCGCATCGAGGCTTCTTCATCCAGTCGATTGTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSTNVEFRAASCLV*YTASRLLHPVDCVS Trigger: AGAAACACAATCGACTGGATGAAGAAGCCTCGATGCGGTGTACCAGACCAGACAAGAGGCAGCTCTAAATTCAACATTCGTCGAAAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000149353.2 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCTCTGCTTTGCGCGGAGTATTGCTGACAGACCAATGGACGGCCTGGGACAGGATCTCCAACTTTaGGAGTTACGTTCTTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: FLLCFARSIADRPMDGLGQDLQL*ELRSLY Trigger: GTATAAAGAACGTAACTCCAAAAGTTGGAGATCCTG...TCCCAGGCCGTCCATTGGTCTGTCAGCAATACTCCGCGCAAAGCAGAGCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAATAGCGGTGGGGTCGTaGGAATGTTCCAGTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQIAVGS*ECSSPR Trigger: TCTAGGACTGGAACATTCCAACGACCCCACCGCTAT...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATCTCCCACCTGACAAAACGATGTGCAGGAGACTATCCATAGTGGTCACAATATCCACATCACGTTaGCCGTTTTCTAGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PDLPPDKTMCRRLSIVVTISTSR*PFSSSL Trigger: CAGTGAACTAGAAAACGGCAAACGTGATGTGGATAT...TGTGACCACTATGGATAGTCTCCTGCACATCGTTTTGTCAGGTGGGAGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
||
| CDS-3UTR CAA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACCCATCCATCACCCTGTaGTTTCTCACTCGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYPSITL*FLTRQN Trigger: GTTTTGGCGAGTGAGAAACAACAGGGTGATGGATGG...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAACAGTGCTGGCTGTGTaGTCCAGTTTGATGACAATG | + |
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Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQTVLAV*SSLMTM Trigger: CATTGTCATCAAACTGGACAACACAGCCAGCACTGT...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS GCA 90 bp | TGCTCCGTTCCGCAGACTGTAGCACATAAAATCCAAAGCAAGGTTTaGAAGAAAAACACACCCGAACGATGCACGAAATCCAACCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CSVPQTVAHKIQSKV*KKNTPERCTKSNLL Trigger: AAGAAGGTTGGATTTCGTGCATCGTTCGGGTGTGTTTTTCTTGCAAACCTTGCTTTGGATTTTATGTGCTACAGTCTGCGGAACGGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | TCCCAACAGTCTAGCATCCTGCATGTGTTCCAGATCTCCCACCTGACAAAACGACAGGATCTCCAACTTTaGGAGTTACGTTCTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: SQQSSILHVFQISHLTKRQDLQL*ELRSLY Trigger: GTATAAAGAACGTAACTCCAAAAGTTGGAGATCCTG...TCGTTTTGTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | TCTCTTTCTTTCTCTTTCCCAGAAATGGGCTCAGATTTCAGAAGGAAATGTATTGCCTGTCATGTCTCCTaGGGTCTGCTGGAGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: SLSFSFPEMGSDFRRKCIACHVS*GLLEEQ Trigger: CTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGC...AATACATTTCCTTCTGAAATCTGAGCCCATTTCTGGGAAAGAGAAAGAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGGGAGGCCGAGGAGGTTaGGGCCTGTCATGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DPYKITITFFPSETQYFLGGRGG*GLSCLL Trigger: AAGGAGACATGACAGGCCCAAACCTCCTCGGCCTCC...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CCA 90 bp | AAAGGCACGGCGAATTGCTCTCCGGGTCTCAGGATCTCCAACTTTTaGAGTTACGTTCTTTATACTGTAAGTGATATGTTTGTGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: KGTANCSPGLRISNF*SYVLYTVSDMFVLP Trigger: TGGCAACACAAACATATCACTTACAGTATAAAGAACGTAACTCCAAAAGTTGGAGATCCTGAGACCCGGAGAGCAATTCGCCGTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029881.10 ENSMUST00000149353.2 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | AGGAAACACCATTCTGCCAGGCTTTTCAGCATGCCACCCATGATTAAAAATGTCCGCTTTCGACGAATGTaGAATTTAGAGCTGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RKHHSARLFSMPPMIKNVRFRRM*NLELPL Trigger: AAGAGGCAGCTCTAAATTCAACATTCGTCGAAAGCG...GACATTTTTAATCATGGGTGGCATGCTGAAAAGCCTGGCAGAATGGTGTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR CAA 90 bp | CAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGAGTAGGTGGAGGGATCTaGTCAGGTGGACCATATATC | + |
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Preference number: 5 (lower is better) Translates to: QHNSSCLESQVTTNSQKRVGGGI*SGGPYI Trigger: GATATATGGTCCACCTGACAAGATCCCTCCACCTAC...TCTTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGACCATCCATCACCCTGTaGTTTCTCACTCGCCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: QHNSSCLESQVTTNSQKRPSITL*FLTRQN Trigger: GTTTTGGCGAGTGAGAAACAACAGGGTGATGGATGG...TCTTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAAGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCA | + |
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Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQAVLSS*MTMSTS Trigger: TGATGTAGACATTGTCATCAAACTGGACAACACAGC...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR CAA 90 bp | ACAAATCTGAACTTCTCGAAACCTGTGATGGCTTTCCCTTTTGGCCAGTTCTACTCTTCATCCAGTCGATaGTGTTTCTGTCCACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: TNLNFSKPVMAFPFGQFYSSSSR*CFCPLF Trigger: GAAAAGTGGACAGAAACACAATCGACTGGATGAAGA...GTAGAACTGGCCAAAAGGGAAAGCCATCACAGGTTTCGAGAAGTTCAGATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGGGTCAGGAGGCAGGAGGGGGTTCAGAAATATTTCAAAACAACCGAAAGCCAGAAGTAAGTAATTaGCATTGGGTATCCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: ILGQEAGGGSEIFQNNRKPEVSN*HWVSIH Trigger: ATGGATGGATACCCAATGCAAATTACTTACTTCTGG...CTTTCGGTTGTTTTGAAATATTTCTGAACCCCCTCCTGCCTCCTGACCCAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAACCAGAAGTAAGTAATTaGCATTGGGTATCCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQPEVSN*HWVSIH Trigger: ATGGATGGATACCCAATGCAAATTACTTACTTCTGG...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CCAGATTGCAAGACTGATCATCCTGACTCTGTAAGCTGGTCCGATAGTTCTCAATTGAACACCCAGTATTaGTTGCCTTTAAAGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: PDCKTDHPDSVSWSDSSQLNTQY*LPLKKT Trigger: CGTCTTCTTTAAAGGCAACAAATACTGGGTGTTCAA...TTGAGAACTATCGGACCAGCTTACAGAGTCAGGATGATCAGTCTTGCAATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS-3UTR CAA 90 bp | AGGAAACACCATTCTGCCAGGCTTTTCAGCATGCCACCCATGATTAAAAATGTCATGAGGGTAACCAGGTaGAAGAGTTGTGTCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: RKHHSARLFSMPPMIKNVMRVTR*KSCVFE Trigger: TTCAAAGACACAACTCTTCAACCTGGTTACCCTCAT...GACATTTTTAATCATGGGTGGCATGCTGAAAAGCCTGGCAGAATGGTGTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS GCA 90 bp | GTTGCCTTTAAAGAAGACGAAATTTCCGTCACTGTTTTCATAAACTaGATCAATACTGGGAGGAAGGCCCCGCCAGAAGTAAGTAATTTG | + |
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Preference number: 5 (lower is better) Translates to: VAFKEDEISVTVFIN*INTGRKAPPEVSNL Trigger: CAAATTACTTACTTCTGGCGGGGCCTTCCTCCCAGTATTGATGCAGTTTATGAAAACAGTGACGGAAATTTCGTCTTCTTTAAAGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS GCA 90 bp | GGAAGCTTTAAAGAAGACGAAATTTCCGTCACTGTTTTCATAAACTaGATCAATACTGGGAGGAAGGCCCCGCCAGAAGTAAGTAATTTG | + |
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Preference number: 5 (lower is better) Translates to: GSFKEDEISVTVFIN*INTGRKAPPEVSNL Trigger: CAAATTACTTACTTCTGGCGGGGCCTTCCTCCCAGTATTGATGCAGTTTATGAAAACAGTGACGGAAATTTCGTCTTCTTTAAAGCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | AGAACAGCAGATACTGTGCATCACGGAAGCTTCTCCATGATTATATTTCCACTCCAAAACCACTGGTCCTaGAAAACAAACATCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: RTADTVHHGSFSMIIFPLQNHWS*KTNISL Trigger: AAGGGAGATGTTTGTTTTCAAGGACCAGTGGTTTTG...GAGTGGAAATATAATCATGGAGAAGCTTCCGTGATGCACAGTATCTGCTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | CAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAGACAAAACCACTGGTCCTaGAAAACAAACATCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: QHNSSCLESQVTTNSQKRQNHWS*KTNISL Trigger: AAGGGAGATGTTTGTTTTCAAGGACCAGTGGTTTTG...TCTTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | GATCCTTATAAAATAACCATCACCTTCTTTCCTTCAGAGACACAATACTTCTTGTCTTCATCCAGTCGATaGTGTTTCTGTCCACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: DPYKITITFFPSETQYFLSSSSR*CFCPLF Trigger: GAAAAGTGGACAGAAACACAATCGACTGGATGAAGA...CAAGAAGTATTGTGTCTCTGAAGGAAAGAAGGTGATGGTTATTTTATAAGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS-3UTR CAA 90 bp | AACAGCATAACAGCTCTTGTCTTGAATCTCAAGTTACCACAAACTCCCAGAAAAAACACCCAGTATTTGTaGCCTTTAAAGAAGACGAAA | + |
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Preference number: 5 (lower is better) Translates to: NSITALVLNLKLPQTPRKNTQYL*PLKKTK Trigger: TTTCGTCTTCTTTAAAGGCAACAAATACTGGGTGTT...TTTTCTGGGAGTTTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTATGCTGTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS GCA 72 bp | CCGAGGAGGTTTGGGCCTGTCATGTCTCCTTGGGTCTaGTGGAGGAACAGATCGGTGCGGGGGCACTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: PRRFGPVMSPWV*WRNRSVRGHCR Trigger: CCGACAGTGCCCCCGCACCGATCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGCCCAAACCTCCTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CAA 72 bp | TGGGAGGCCGAGGAGGTTTGGGCCTGTCATGTCTCCTaGGGTCTGCTGGAGGAACAGATCGGTGCGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WEAEEVWACHVS*GLLEEQIGAGA Trigger: TGCCCCCGCACCGATCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGCCCAAACCTCCTCGGCCTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CAA 90 bp | GTCTGCCAGTGGGAGGCCGAGGAGGTTTGGGCCTGTCATGTCTCCTaGGGTCTGCTGGAGGAACAGATCGGTGCGGGGGCACTGTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: VCQWEAEEVWACHVS*GLLEEQIGAGALSV Trigger: TACCGACAGTGCCCCCGCACCGATCTGTTCCTCCAGCAGACCCAAGGAGACATGACAGGCCCAAACCTCCTCGGCCTCCCACTGGCAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CCA 72 bp | ACTGCATGGTCTCTGCAGAGCGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGTAGCCGTATTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TAWSLQSAALTF*GQSVEGSRIFV Trigger: TACAAAAATACGGCTACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000149353.2 ENSMUST00000183662.8 |
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| CDS CCA 72 bp | ACGAATGTTGAATTTAGAGCTGCCTCTTGTCTGGTCTaGTACACCGCATCGAGGCTTCTTCATCCAGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: TNVEFRAASCLV*YTASRLLHPVD Trigger: ATCGACTGGATGAAGAAGCCTCGATGCGGTGTACCAGACCAGACAAGAGGCAGCTCTAAATTCAACATTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000149353.2 ENSMUST00000183662.8 |
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| CDS CCA 72 bp | TTTCGACGAATGTTGAATTTAGAGCTGCCTCTTGTCTaGTCTGGTACACCGCATCGAGGCTTCTTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRRMLNLELPLV*SGTPHRGFFIQ Trigger: CTGGATGAAGAAGCCTCGATGCGGTGTACCAGACCAGACAAGAGGCAGCTCTAAATTCAACATTCGTCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000149353.2 ENSMUST00000183662.8 |
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| CDS GCA 72 bp | AAAGAAGACGAAATTTCCGTCACTGTTTTCATAAACTaGATCAATACTGGGAGGAAGGCCCCGCCAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: KEDEISVTVFIN*INTGRKAPPEV Trigger: TACTTCTGGCGGGGCCTTCCTCCCAGTATTGATGCAGTTTATGAAAACAGTGACGGAAATTTCGTCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029881.10 ENSMUST00000183662.8 |
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| CDS CAA 90 bp | GGGGATTCCATTCCCAAGGGTAATCAAGTCATGAGGGTAACCAGGTaGAAGAGTTGTGTCTTTGAACACCCAGTATTTGTTGCCTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GDSIPKGNQVMRVTR*KSCVFEHPVFVAFK Trigger: TTTAAAGGCAACAAATACTGGGTGTTCAAAGACACAACTCTTCAACCTGGTTACCCTCATGACTTGATTACCCTTGGGAATGGAATCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029881.10 |
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| CDS GCA 72 bp | CCGTATTTTTGTAACCAAACCTCCACATTGAAATACTaGTCCGTTCCGCAGACTGTAGCACATAAAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: PYFCNQTSTLKY*SVPQTVAHKIQ Trigger: TTGGATTTTATGTGCTACAGTCTGCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTTACAAAAATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029881.10 ENSMUST00000142434.8 ENSMUST00000183662.8 |
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