Pregenerated sensors for MMP15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031790Ensembl transcript IDs: ENSMUST00000034243.7
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGGCAAGGCTGGCAGGGGGATGTGTGTGGCTAGGAGGGCATCCTaGCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GGKAGRGMCVARRAS*RAEGASGIHTSPVP Trigger: AGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGCCCTCCTAGCCACACACATCCCCCTGCCAGCCTTGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | CTGTGTGAGTCCCCTGTGGTGAGGAGCTCAGGGCTACTTCTTGGATaGGCCAGAAGCTCTGGGCTTGGAGGGCCAATCCCTTCGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LCESPVVRSSGLLLG*ARSSGLGGPIPSVL Trigger: GAGAACCGAAGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCTGAGCTCCTCACCACAGGGGACTCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 90 bp | TCTCCAGACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTaGCCAAAATCCAATCCAGGTGGGTGGGACGATTGGGCGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SPDPSLSSCSSHLSG*PKSNPGGWDDWAAL Trigger: CAAGGCCGCCCAATCGTCCCACCCACCTGGATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | CCTCTAGTGCCAGGCTATAAGAATCCACCACTTGGAAAGCGGCGGTaGCCCAGAGGATCCTGGCTGGCAGCCCTTTACTGCTCAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PLVPGYKNPPLGKRR*PRGSWLAALYCSRL Trigger: AAGCCTTGAGCAGTAAAGGGCTGCCAGCCAGGATCCTCTGGGTCACCGCCGCTTTCCAAGTGGTGGATTCTTATAGCCTGGCACTAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 90 bp | TCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTaGCCCATGTCATTAAGAGTTGGGACAAGGACTGCAGAAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SHTLPRDLWYPSGCV*PMSLRVGTRTAEAG Trigger: CCCAGCTTCTGCAGTCCTTGTCCCAACTCTTAATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 90 bp | ACTCTGTGTGGGGTGAGCTGCTGGCCTGAGCCTAGTAGTGTTGTGTaGGGACAGGAATCTGGAAGGGAGGAAGCCCATAAGCTTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: TLCGVSCWPEPSSVV*GQESGREEAHKLGL Trigger: CAGACCAAGCTTATGGGCTTCCTCCCTTCCAGATTCCTGTCCCCACACAACACTACTAGGCTCAGGCCAGCAGCTCACCCCACACAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 90 bp | ATAAGCTTGGTCTGTGACCTGCTGAGCATCCACAATCACACACACTaGCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGT | + |
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Preference number: 1 (lower is better) Translates to: ISLVCDLLSIHNHTH*PGTSGTLVGVSAPC Trigger: ACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGGTCACAGACCAAGCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 90 bp | GCATATACTCTCCCTAAGGCAAATTCAGGAGGGCAGAGCCCGAGGTaGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: AYTLPKANSGGQSPR*APSRQTQFLSWEER Trigger: CCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTCGGGCTCTGCCCTCCTGAATTTGCCTTAGGGAGAGTATATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 90 bp | GAGGAGCTCAGGGCTACTTCTTGGATGAGCCAGAAGCTCTGGGCTTaGAGGGCCAATCCCTTCGGTTCTCCTCAGCCCATTCCTATACAA | + |
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Preference number: 1 (lower is better) Translates to: EELRATSWMSQKLWA*RANPFGSPQPIPIQ Trigger: TTGTATAGGAATGGGCTGAGGAGAACCGAAGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCTGAGCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | CTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTaGAAAGCCAGAGCCAGAGAAGCTTCCCAGCCCTCTGCCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: LQGKHSSCRGRRGSG*KARAREASQPSAIF Trigger: GAAGATGGCAGAGGGCTGGGAAGCTTCTCTGGCTCTGGCTTTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | CTGTACAGTACCATTTCCCACAGAAGCCTCCTGCTGACTCCAGGATaGGAAGAGGAAGGGAGGGCCCCTTTCACCCTTAGGACAGACTTC | + |
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Preference number: 1 (lower is better) Translates to: LYSTISHRSLLLTPG*EEEGRAPFTLRTDF Trigger: GAAGTCTGTCCTAAGGGTGAAAGGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAAATGGTACTGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | GGAGGTAAAGTGGCCCCGTTACACAATTCTCTCCAGACCCATCCCTaGGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATC | + |
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Preference number: 1 (lower is better) Translates to: GGKVAPLHNSLQTHP*VLVQATSQAAQNPI Trigger: GATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTCTGGAGAGAATTGTGTAACGGGGCCACTTTACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 90 bp | CAGACAGGTTGTCCATTAAACAGTTTCTTAAGGAGTCAAGGCCTCTaGTCACCCCAAGAGCACAGGCCAAAGCAGGCCAGACTAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: QTGCPLNSFLRSQGL*SPQEHRPKQARLGT Trigger: AGTCCCTAGTCTGGCCTGCTTTGGCCTGTGCTCTTGGGGTGATCAGAGGCCTTGACTCCTTAAGAAACTGTTTAATGGACAACCTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 90 bp | TGTCTGGTTCTTCCAGACCGCCAGATGTGGAGTCATTTGGGAAGCTaGGCTGTCCTCTCCTCTTATCACTACCAAATGTTAAGTAAACCC | + |
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Preference number: 1 (lower is better) Translates to: CLVLPDRQMWSHLGS*AVLSSYHYQMLSKP Trigger: GGGTTTACTTAACATTTGGTAGTGATAAGAGGAGAGGACAGCCCAGCTTCCCAAATGACTCCACATCTGGCGGTCTGGAAGAACCAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 90 bp | TGCATTTTATTCTCTGAACATGGAGGGAAGATTCTGGAGGTAAAGTaGCCCCGTTACACAATTCTCTCCAGACCCATCCCTGAGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: CILFSEHGGKILEVK*PRYTILSRPIPEFL Trigger: CAAGAACTCAGGGATGGGTCTGGAGAGAATTGTGTAACGGGGCCACTTTACCTCCAGAATCTTCCCTCCATGTTCAGAGAATAAAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR GCA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCACACGTCTCCTGTCCCTaGAGACCTGAGCACCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPHVSCP*RPEHRV Trigger: CACCCGGTGCTCAGGTCTGCAGGGACAGGAGACGTG...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACAGAAGCCTCCTGCTGACTCCAGGATGAGAAGAGGAAGGGAGGGCCCCCTGCCCAGGGACCTCTaGTACCCTAGTGGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: FPQKPPADSRMRRGREGPLPRDL*YPSGCV Trigger: GACACACCCACTAGGGTACCAGAGGTCCCTGGGCAG...GGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 90 bp | GGAGGGCAGAGCCCGAGGTGGGCTCCTTCAAGGCAAACACAGTTCTaGTCGTGGGAGGAGAGGTTCAGGCTGAAAAGCCAGAGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GGQSPRWAPSRQTQF*SWEERFRLKSQSQR Trigger: TCTCTGGCTCTGGCTTTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTCGGGCTCTGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGAAGCGGAACCAAAGGCTaGGAGAGGGTGCCAAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRWVGRLGGLVWFFQTARSGTKG*ERVPKR Trigger: TCTTTTTGGCACCCTCTCTCAGCCTTTGGTTCCGCT...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACAGAAGCCTCCTGCTGACTCCAGGATGAGAAGAGGAAGGGAGGGCCCCTCTCAAAGCATCTCCTaGCCCGAGTCAGGAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: FPQKPPADSRMRRGREGPSQSIS*PESGKR Trigger: CCGCTTTCCTGACTCGGGCCAGGAGATGCTTTGAGA...GGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATATTGGGAGGGGAGCTTaGCAGGCTCCCTTTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: THCPGTSGTLVGVSAPCHIGRGA*QAPFGP Trigger: AGGACCAAAGGGAGCCTGCCAAGCTCCCCTCCCAAT...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATGGGGCAAGTAGGAGCTaGAGAATGCTAGGATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: THCPGTSGTLVGVSAPCHGASRS*RMLGWG Trigger: ACCCCATCCTAGCATTCTGCAGCTCCTACTTGCCCC...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATCTCGGCATCCTCGCTTaGCCCCGACCCTGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNLGILA*PRPCQA Trigger: TGCTTGGCAGGGTCGGGGCCAAGCGAGGATGCCGAG...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATGCCTCCGGAGACCTATaGGGCACTGAAAGAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: THCPGTSGTLVGVSAPCHASGDL*GTEREY Trigger: ATATTCTCTTTCAGTGCCCCATAGGTCTCCGGAGGC...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 90 bp | GTGTTGTGTGGGGACAGGAATCTGGAAGGGAGGAAGCCCATAAGCTaGGTCTGTGACCTGCTGAGCATCCACAATCACACACACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: VLCGDRNLEGRKPIS*VCDLLSIHNHTHCP Trigger: TGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGGTCACAGACCAAGCTTATGGGCTTCCTCCCTTCCAGATTCCTGTCCCCACACAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 90 bp | AAGTGGCCCCGTTACACAATTCTCTCCAGACCCATCCCTGAGTTCTaGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATCCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KWPRYTILSRPIPEF*FKPPLRLPKIQSRW Trigger: CCACCTGGATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTCTGGAGAGAATTGTGTAACGGGGCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR-3UTR GCA 90 bp | CTATGGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAAGGAGGAGCTAGTCACAAGGCTGAGAGAGGGTaGCAAAAAGAAGAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: LWGTEREYGQPREGGASHKAERG*QKEEAP Trigger: AGGTGCCTCTTCTTTTTGGCACCCTCTCTCAGCCTT...GTGACTAGCTCCTCCTTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | GCTGGCAGGGGGATGTGTGTGGCTAGGAGGGCATCCTaGCGCGCCGAGGGAGCATCTGGGATCCACACGTCT | + |
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Preference number: 3 (lower is better) Translates to: AGRGMCVARRAS*RAEGASGIHTS Trigger: AGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGCCCTCCTAGCCACACACATCCCCCTGCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | CGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTaGAGACCTGAGCACCGGGTGCTGCGGGTGCTACCT | + |
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Preference number: 3 (lower is better) Translates to: RGSIWDPHVSCP*RPEHRVLRVLP Trigger: AGGTAGCACCCGCAGCACCCGGTGCTCAGGTCTGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | GGGGCGGGCGGGGAGTGCCCAGCCTCCGGAGACCTATaGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GAGGECPASGDL*GTEREYGQPRE Trigger: TTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAGGTCTCCGGAGGCTGGGCACTCCCCGCCCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | CTCGCTTGGCCCCGACCCTGCCAAGCAGGTCTTCCTTaGGGCATGCTTGGGTCTGAGCGTACAAGTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LAWPRPCQAGLP*GMLGSERTSAA Trigger: GGCTGCACTTGTACGCTCAGACCCAAGCATGCCGCAAGGAAGACCTGCTTGGCAGGGTCGGGGCCAAGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | CAAACTGGGAGGAGGGTATTCCTCGGCATCCTCGCTTaGCCCCGACCCTGCCAAGCAGGTCTTCCTTGCGGC | + |
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Preference number: 3 (lower is better) Translates to: QTGRRVFLGILA*PRPCQAGLPCG Trigger: GCCGCAAGGAAGACCTGCTTGGCAGGGTCGGGGCCAAGCGAGGATGCCGAGGAATACCCTCCTCCCAGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 72 bp | ATGGGTCCTCCCCGGTCCCTACCACCTGCTGCTGTGTaGGTCCCCTGTGGTGAGGAGCTCAGGGCTACTTCT | + |
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Preference number: 3 (lower is better) Translates to: MGPPRSLPPAAV*VPCGEELRATS Trigger: AGAAGTAGCCCTGAGCTCCTCACCACAGGGGACTCACACAGCAGCAGGTGGTAGGGACCGGGGAGGACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | ATTGGCCTAGGGTTGAACACAGACACGGACCTCAGATaGACCCCAGTTCACCAGCCACACCCAGGCCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IGLGLNTDTDLR*TPVHQPHPGPQ Trigger: CTGGGGGCCTGGGTGTGGCTGGTGAACTGGGGTGCATCTGAGGTCCGTGTCTGTGTTCAACCCTAGGCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 72 bp | TCCCCTGTGGTGAGGAGCTCAGGGCTACTTCTTGGATaGGCCAGAAGCTCTGGGCTTGGAGGGCCAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: SPVVRSSGLLLG*ARSSGLGGPIP Trigger: AGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCTGAGCTCCTCACCACAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | CACTTGGAAAGCGGCGGTGACCCAGAGGATCCTGGCTaGCAGCCCTTTACTGCTCAAGGCTTTAGGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: HLESGGDPEDPG*QPFTAQGFREA Trigger: TGCCTCCCTAAAGCCTTGAGCAGTAAAGGGCTGCCAGCCAGGATCCTCTGGGTCACCGCCGCTTTCCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | GGCTGCCCAAAATCCAATCCAGGTGGGTGGGACGATTaGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: GCPKSNPGGWDD*AALSGSSRPPD Trigger: ATCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGATTGGATTTTGGGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 72 bp | CCAGGCTATAAGAATCCACCACTTGGAAAGCGGCGGTaGCCCAGAGGATCCTGGCTGGCAGCCCTTTACTGC | + |
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Preference number: 3 (lower is better) Translates to: PGYKNPPLGKRR*PRGSWLAALYC Trigger: GCAGTAAAGGGCTGCCAGCCAGGATCCTCTGGGTCACCGCCGCTTTCCAAGTGGTGGATTCTTATAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | AGACATGTCCAGGGCCCCTTCCTAGAGGAAAGAAGCTaGAGGCCCGGGGCAAGTAGGAGCTGCAGAATGCTA | + |
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Preference number: 3 (lower is better) Translates to: RHVQGPFLEERS*RPGASRSCRML Trigger: TAGCATTCTGCAGCTCCTACTTGCCCCGGGCCTGCAGCTTCTTTCCTCTAGGAAGGGGCCCTGGACATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | TCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTGCCTaGGGCGGTACTACACTCCGGGAGATCTCAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SRGVSLCPFVPA*GGTTLREISKH Trigger: ATGCTTTGAGATCTCCCGGAGTGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | GGGGTGAGCTGCTGGCCTGAGCCTAGTAGTGTTGTGTaGGGACAGGAATCTGGAAGGGAGGAAGCCCATAAG | + |
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Preference number: 3 (lower is better) Translates to: GVSCWPEPSSVV*GQESGREEAHK Trigger: CTTATGGGCTTCCTCCCTTCCAGATTCCTGTCCCCACACAACACTACTAGGCTCAGGCCAGCAGCTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | ACCTTCCTGGACTCCATCCCAAAGGTCCTACCAAACTaGGAGGAGGGTATTCCTCGGCATCCTCGCTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: TFLDSIPKVLPN*EEGIPRHPRLA Trigger: GGCCAAGCGAGGATGCCGAGGAATACCCTCCTCCCAGTTTGGTAGGACCTTTGGGATGGAGTCCAGGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | AAGCCACCTCTCAGGCTGCCCAAAATCCAATCCAGGTaGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KPPLRLPKIQSR*VGRLGGLVWFF Trigger: GAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGATTGGATTTTGGGCAGCCTGAGAGGTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CCA 72 bp | GAGCTCAGGGCTACTTCTTGGATGAGCCAGAAGCTCTaGGCTTGGAGGGCCAATCCCTTCGGTTCTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ELRATSWMSQKL*AWRANPFGSPQ Trigger: CTGAGGAGAACCGAAGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCTGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR TCA 72 bp | ACCATTTCCCACAGAAGCCTCCTGCTGACTCCAGGATaGGAAGAGGAAGGGAGGGCCCCTTTCACCCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: TISHRSLLLTPG*EEEGRAPFTLR Trigger: CCTAAGGGTGAAAGGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | ATCTTCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTaGCTGGGGCGGTACTACACTCCGGGAGATCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: IFQRCEPLSLRS*LGRYYTPGDLK Trigger: TTTGAGATCTCCCGGAGTGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | CTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTaGCCCATGTCATTAAGAGTTGGGACAAGGACTGCA | + |
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Preference number: 3 (lower is better) Translates to: LPRDLWYPSGCV*PMSLRVGTRTA Trigger: TGCAGTCCTTGTCCCAACTCTTAATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | GTCTGTGACCTGCTGAGCATCCACAATCACACACACTaGCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VCDLLSIHNHTH*PGTSGTLVGVS Trigger: AGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGGTCACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | GTTCTGCAGAGGGGACATCTAGAGTGCTGCAGGACATaGCCCTCCGATCTGTCACCTCTAGTGCCAGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: VLQRGHLECCRT*PSDLSPLVPGY Trigger: ATAGCCTGGCACTAGAGGTGACAGATCGGAGGGGCATGTCCTGCAGCACTCTAGATGTCCCCTCTGCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR GCA 72 bp | GCTGACTCTCAGGTTCTGCAGAGGGGACATCTAGAGTaGTGCAGGACATGCCCCTCCGATCTGTCACCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ADSQVLQRGHLE*CRTCPSDLSPL Trigger: TAGAGGTGACAGATCGGAGGGGCATGTCCTGCAGCACTCTAGATGTCCCCTCTGCAGAACCTGAGAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CCA 72 bp | GCGGTACTACACTCCGGGAGATCTCAAAGCATCTCCTaGCCCGAGTCAGGAAAGCGGAACCAAAGGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVLHSGRSQSIS*PESGKRNQRLR Trigger: TCTCAGCCTTTGGTTCCGCTTTCCTGACTCGGGCCAGGAGATGCTTTGAGATCTCCCGGAGTGTAGTACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CCA 72 bp | AGGCCCGGGGCAAGTAGGAGCTGCAGAATGCTAGGATaGGGTAGGGCTTTTAGGCTTCTGGGCTTCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RPGASRSCRMLG*GRAFRLLGFLG Trigger: TCCTAAGAAGCCCAGAAGCCTAAAAGCCCTACCCCATCCTAGCATTCTGCAGCTCCTACTTGCCCCGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CCA 72 bp | AGGGCTACTTCTTGGATGAGCCAGAAGCTCTGGGCTTaGAGGGCCAATCCCTTCGGTTCTCCTCAGCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RATSWMSQKLWA*RANPFGSPQPI Trigger: AATGGGCTGAGGAGAACCGAAGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR TCA 72 bp | GTGGCCCCGTTACACAATTCTCTCCAGACCCATCCCTaGGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VAPLHNSLQTHP*VLVQATSQAAQ Trigger: TTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTCTGGAGAGAATTGTGTAACGGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR GCA 72 bp | CCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTaGCCAAAATCCAATCCAGGTGGGTGGGACGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSLSSCSSHLSG*PKSNPGGWDDW Trigger: CCAATCGTCCCACCCACCTGGATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CCA 72 bp | GAGCATCCACAATCACACACACTGCCCAGGGACCTCTaGTACCCTAGTGGGTGTGTCTGCCCCATGTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: EHPQSHTLPRDL*YPSGCVCPMSL Trigger: TAATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR TCA 72 bp | GAATCTGGAAGGGAGGAAGCCCATAAGCTTGGTCTGTaGCCTGCTGAGCATCCACAATCACACACACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ESGREEAHKLGL*PAEHPQSHTLP Trigger: GGGCAGTGTGTGTGATTGTGGATGCTCAGCAGGTCACAGACCAAGCTTATGGGCTTCCTCCCTTCCAGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR TCA 72 bp | TGGATGGTCGTGAGCCACCATGTTGTTGATAGGATTTaGACTCAGGACCTTCGGAAGAGCAGGCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WMVVSHHVVDRI*TQDLRKSRQCS Trigger: AGAGCACTGCCTGCTCTTCCGAAGGTCCTGAGTTCAAATCCTATCAACAACATGGTGGCTCACGACCATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCATCCTGCCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTGCAGTGGGGGCCCTGGTTTaGGGGGCCTTTCTGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASCRAEGASGIHTSPVPAVGALV*GAFLAS Trigger: GGAAGCCAGAAAGGCCCCCCAAACCAGGGCCCCCAC...TGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCATCCTGCCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTGCAGGCTCCACGTGCTCCTaGCAGCCCATGAAGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCRAEGASGIHTSPVPAGSTCS*QPMKSR Trigger: GCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCC...TGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGACCTGGATGTGGTGGCTaGGGAGGCCGAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRWVGRLGGLVWFFQTARPGCGG*GGRGGW Trigger: CCAGCCACCTCGGCCTCCCCAGCCACCACATCCAGG...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCACAGAAGCCTCCTGCTGACTCCAGGATGAGAAGAGGAAGGGAGGGCCCCGCGAAGCTCGGCTGCTaGGGCAGCTGCCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPQKPPADSRMRRGREGPAKLGC*GSCQCS Trigger: GCTGCACTGGCAGCTGCCTCAGCAGCCGAGCTTCGC...GGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGAGCATCCACAATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGCCGAGGTGGCTGGTaGTCTGGCCGTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PAEHPQSHTLPRDLWYPSGRGGW*SGRPGR Trigger: GCGGCCAGGACGGCCAGATCACCAGCCACCTCGGCC...ACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTGCCTGGGGCGGTACTACAGGTCAGGCCTCTCTGTaGCTCGGGGCTGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRGVSLCPFVPAWGGTTGQASL*LGAGVG Trigger: CCCCACCCCAGCCCCGAGCCACAGAGAGGCCTGACC...TGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGATGTGGAGCTCGTAGGCAGCACTaGTGTTCCCCGGCAGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: WVGRLGGLVWFFQTARCGARRQH*CSPADR Trigger: GCGGTCTGCCGGGGAACATCAGTGCTGCCTACGAGC...TCCACATCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGACTTGCTGTCACCATCTaGCTCAGGCTCGGCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRWVGRLGGLVWFFQTARLAVTI*LRLGTP Trigger: GGGGGTGCCGAGCCTGAGGCAGATGGTGACAGCAAG...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATCTGGGGAGGCCGAGGTaGCTGGTGATCTGGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHLGRPR*LVIWPS Trigger: GGACGGCCAGATCACCAGCCACCTCGGCCTCCCCAG...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCATCCTGCCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTGCAAGAAGGTGTGACCTGTaGGCTCCCACCAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASCRAEGASGIHTSPVPARRCDL*APTRWL Trigger: CAGCCATCTGGTGGGAGCCCACAGGTCACACCTTCT...TGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGACCCCTTTGGGAGAGGTaGGGATCCCCTGCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SRWVGRLGGLVWFFQTARPLWER*GSPARH Trigger: GTGTCTGGCAGGGGATCCCCACCTCTCCCAAAGGGG...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCATCCTGCCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTGCAAGGATGGATTTGGGGTaGCCGGGTTCCATCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASCRAEGASGIHTSPVPARMDLG*PGSIRR Trigger: CCTACGGATGGAACCCGGCCACCCCAAATCCATCCT...TGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTGCCTGGGGCGGTACTACAGAACGCGGTTGTGCCTaGCTCGCCAGAACCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGVSLCPFVPAWGGTTERGCA*LARTSG Trigger: GCCGCTGGTTCTGGCGAGTCAGGCACAACCGCGTTC...TGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCAACCACCTCCTCCATCTaGACCACCACGCGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPTTSSI*TTTRLP Trigger: GGGCAGCCGCGTGGTGGTGCAGATGGAGGAGGTGGT...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCAGGGCAGAGCGCATGGTaGACATGTGGCGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPGQSAW*TCGGWA Trigger: AGCCCAGCCGCCACATGTCCACCATGCGCTCTGCCC...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATGCGGAGGCCAGGATCTaGGCAGAGCGCATGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHAEARI*AERMVD Trigger: GTCCACCATGCGCTCTGCCCAGATCCTGGCCTCCGC...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATCTTCCCACCTGGATGTaGTGGCTGGGGAGGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHLPTWM*WLGRPR Trigger: CCTCGGCCTCCCCAGCCACCACATCCAGGTGGGAAG...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGATGTGGAGCTGCTCAGCGGCTGTaGGTAGCCGGGCTCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: WVGRLGGLVWFFQTARCGAAQRL*VAGLQI Trigger: AATCTGGAGCCCGGCTACCCACAGCCGCTGAGCAGC...TCCACATCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CAA 72 bp | GGACAGGGTGGGGTGGAGTCCAGAGAGGGAGCATGGTaGAGGGACCTTGCTGATGACTTAGCAGCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGGVESREGAW*RDLADDLAAWP Trigger: GGGCCAGGCTGCTAAGTCATCAGCAAGGTCCCTCAACCATGCTCCCTCTCTGGACTCCACCCCACCCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATGATCGGGGCTCCACGTaGTCCTGGCAGCCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHDRGST*SWQPMK Trigger: CTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATC...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GCATATACTCTCCCTAAGGCAAATTCAGGAGGGCAGAGCCCGAGGTGGGCTCCTGCACCACCACGCGGCTaGCCTCATCCTTGTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: AYTLPKANSGGQSPRWAPAPPRG*PHPCHP Trigger: CGGGTGACAAGGATGAGGGCAGCCGCGTGGTGGTGC...AGGAGCCCACCTCGGGCTCTGCCCTCCTGAATTTGCCTTAGGGAGAGTATATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTGCCTGGGGCGGTACTACAACCTGCTCCCACACTTaGAAAGCCCTGCGCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGVSLCPFVPAWGGTTTCSHT*KALRTA Trigger: GGCGGTGCGCAGGGCTTTCCAAGTGTGGGAGCAGGT...TGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATGCCGGGGCCTCACAGTaGGGAGAGGCCGGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNAGASQ*GEAGWA Trigger: AGCCCACCCGGCCTCTCCCCACTGTGAGGCCCCGGC...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCACAGAAGCCTCCTGCTGACTCCAGGATGAGAAGAGGAAGGGAGGGCCCCGCTGTGTCTCCTCGTTaGAGCGCCAGTACCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPQKPPADSRMRRGREGPAVSPR*SASTCL Trigger: CAGACAGGTACTGGCGCTTCAACGAGGAGACACAGC...GGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCCAGAGGTGTGAGCCTCTGTCCCTTCGTTCCTGCCTGGGGCGGTACTACAAGGCTGCATCGTTGCTaGGGAAGGCCCCTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRGVSLCPFVPAWGGTTRLHRC*GRPLWE Trigger: CTCCCAAAGGGGCCTTCCTCAGCAACGATGCAGCCT...TGTAGTACCGCCCCAGGCAGGAACGAAGGGACAGAGGCTCACACCTCTGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATCACCCACTCCTGCAGTaGGCGCTTGCAGTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHHPLLQ*ALAVEQ Trigger: CTGCTCTACTGCAAGCGCTCACTGCAGGAGTGGGTG...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATCCCTTGCGCTGCATCTaGACCAGAGCAAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHPLRCI*TRAKAR Trigger: CCTGGCCTTTGCTCTGGTGCAGATGCAGCGCAAGGG...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATTGCGCACCGCCTCCATaGAGTTGTACCAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHCAPPP*SCTSPA Trigger: AGCTGGGCTGGTACAACTCCATGGAGGCGGTGCGCA...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGATCATCTGCGTCGAAATaGGTGTCCCCACCCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRWVGRLGGLVWFFQTARSSASK*VSPPRP Trigger: TGGTCTGGGTGGGGACACCCATTTCGACGCAGATGA...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CAA 72 bp | TCACTAGCATTGGGAGGGGAGCTTGGCAGGCTCCCTTaGGTCCTAGGTGAGACATGTCCAGGGCCCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLALGGELGRLP*VLGETCPGPLP Trigger: AGGAAGGGGCCCTGGACATGTCTCACCTAGGACCAAAGGGAGCCTGCCAAGCTCCCCTCCCAATGCTAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| 3UTR CAA 72 bp | AGGCTGCCCAAAATCCAATCCAGGTGGGTGGGACGATaGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPKIQSRWVGR*GGLVWFFQTAR Trigger: TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGATTGGATTTTGGGCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGAGCATCCACAATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGAGGTGGGGATCCCCTaGCAGACACTGATGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEHPQSHTLPRDLWYPSEVGIP*QTLMGL Trigger: CAAGCCCATCAGTGTCTGGCAGGGGATCCCCACCTC...ACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCACCTGCAGTGAGCGCTTaGAGTAGAGCAGCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPPAVSA*SRAACE Trigger: CTCGCATGCTGCTCTACTGCAAGCGCTCACTGCAGG...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTGAAAGTGATCTGGCCGTCCTaGCCGCCGGGGCCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: APSRQTQFLSWEERFRLKVIWPS*PPGPHS Trigger: ACTGTGAGGCCCCGGCGGCCAGGACGGCCAGATCAC...TTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCATATACTCTCCCTAAGGCAAATTCAGGAGGGCAGAGCCCGAGGTGGGCTCCTGTTGGGGTTGAAGGGTaGACGAGCCACATCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYTLPKANSGGQSPRWAPVGVEG*TSHIGP Trigger: TGGCCCGATGTGGCTCGTCCACCCTTCAACCCCAAC...AGGAGCCCACCTCGGGCTCTGCCCTCCTGAATTTGCCTTAGGGAGAGTATATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTCCTGGCAGCCCATaGAGTCCCGCAGGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVGSFKANTVLVVGGEVQAPGSP*SPAGWI Trigger: AATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGC...CTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GCATATACTCTCCCTAAGGCAAATTCAGGAGGGCAGAGCCCGAGGTGGGCTCCTACACTTGGAAAGCCCTaGGCACCGCCTCCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AYTLPKANSGGQSPRWAPTLGKP*APPPWS Trigger: ACTCCATGGAGGCGGTGCGCAGGGCTTTCCAAGTGT...AGGAGCCCACCTCGGGCTCTGCCCTCCTGAATTTGCCTTAGGGAGAGTATATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATTCTAGAACGCGGTTGTaGCTGACTCGCCAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHSRTRL*LTRQNQ Trigger: CTGGTTCTGGCGAGTCAGGCACAACCGCGTTCTAGA...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGAGCGCCAGTACCTGTCTaGTTGAAAGAAGAAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRWVGRLGGLVWFFQTARAPVPV*LKEEGV Trigger: CACACCTTCTTCTTTCAAGCAGACAGGTACTGGCGC...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATCGCATGGTGGACATGTaGCGGCTGGGCTGGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNRMVDM*RLGWGR Trigger: CCTACCCCAGCCCAGCCGCCACATGTCCACCATGCG...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 72 bp | CAGGGCTACTTCTTGGATGAGCCAGAAGCTCTGGGCTaGGAGGGCCAATCCCTTCGGTTCTCCTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGYFLDEPEALG*EGQSLRFSSAH Trigger: ATGGGCTGAGGAGAACCGAAGGGATTGGCCCTCCAAGCCCAGAGCTTCTGGCTCATCCAAGAAGTAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR TCA 90 bp | CCTGCTGAGCATCCACAATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGAAGACCAATGGTGTaGCCTGCTCCCACACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAEHPQSHTLPRDLWYPSGRPMV*PAPTLG Trigger: TCCAAGTGTGGGAGCAGGTCACACCATTGGTCTTCC...ACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATTGTGGATGCTCAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR TCA 90 bp | GCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTGAAATCCCCTGCCAGACACTaGTGGGCTTGGGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APSRQTQFLSWEERFRLKSPARH*WAWGSQ Trigger: CTGGCTACCCCAAGCCCATCAGTGTCTGGCAGGGGA...TTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATCCACTGGTAGAAGGGTaGCATAATAGCGCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHPLVEG*HNSAGV Trigger: AACCCCAGCGCTATTATGGCACCCTTCTACCAGTGG...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTGAAAGGGGCGCCCTTGCGCTaGATCTGCACCAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: APSRQTQFLSWEERFRLKGAPLR*ICTRAK Trigger: CTTTGCTCTGGTGCAGATGCAGCGCAAGGGCGCCCC...TTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATTTAGACGCTGTACCATaGCCCAGACAGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHLDAVP*PRQSRS Trigger: GCTTCTGGACTGTCTGGGCCATGGTACAGCGTCTAA...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATTTCCTGGAAGACCAATaGTGTGACCTGCTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHFLEDQ*CDLLPH Trigger: GTGTGGGAGCAGGTCACACCATTGGTCTTCCAGGAA...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | CTATGGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAAGGAGGAGCTAGTCACGGTCCAGGGTTCATCTaGGTCGAAATGGGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWGTEREYGQPREGGASHGPGFI*VEMGVP Trigger: GGGGACACCCATTTCGACGCAGATGAACCCTGGACC...GTGACTAGCTCCTCCTTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGCCGCGTTCTCTTCCTTaGTGTCACCATCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSFKANTVLVVGGEVQPRSLP*CHHLPQ Trigger: CTGAGGCAGATGGTGACAGCAAGGAAGAGAACGCGG...CTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGGCTTCTTAGGAGCCTAAGAAGAAGGAACCAAGTCTCAAGGTTATCACCCACCTGGATGTGGTaGCTGGGGAGGCCGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLLRSLRRRNQVSRLSPTWMW*LGRPRW Trigger: CCACCTCGGCCTCCCCAGCCACCACATCCAGGTGGG...TGATAACCTTGAGACTTGGTTCCTTCTTCTTAGGCTCCTAAGAAGCCCAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATAGGCAAAGAGTACCATaGTGTCAGCCTCCGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNRQRVP*CQPPLA Trigger: GGCGAGCGGAGGCTGACATCATGGTACTCTTTGCCT...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCAGTAGGCGTTCGTTGTTaGATTTCCAGTACTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPVGVRC*ISSTWC Trigger: GCACCAAGTACTGGAAATTCAACAACGAACGCCTAC...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGGCTTCTTAGGAGCCTAAGAAGAAGGAACCAAGTCTCAAGGTTATCATGCGAGGGGCGCCCTTaGGCTGCATCTGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLLRSLRRRNQVSRLSCEGRP*AASAPE Trigger: CTCTGGTGCAGATGCAGCGCAAGGGCGCCCCTCGCA...TGATAACCTTGAGACTTGGTTCCTTCTTCTTAGGCTCCTAAGAAGCCCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTGAAATGCCATCGCAGATGTTaGGGCCATACTGGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQTQFLSWEERFRLKCHRRC*GHTGQA Trigger: GGCCTGACCAGTATGGCCCCAACATCTGCGATGGCA...TTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | CTATGGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAAGGAGGAGCTAGTCACAGCCGGGCTCCAGATTaGCTTCTCGGAAAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWGTEREYGQPREGGASHSRAPD*LLGKAS Trigger: ACTGGCTTTTCCGAGAAGCCAATCTGGAGCCCGGCT...GTGACTAGCTCCTCCTTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CCA 90 bp | CTATGGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAAGGAGGAGCTAGTCACTGGGCTCCCACCAGATaGCTGTGTCAATGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWGTEREYGQPREGGASHWAPTR*LCQCGH Trigger: ATGACCGCATTGACACAGCCATCTGGTGGGAGCCCA...GTGACTAGCTCCTCCTTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 72 bp | GGGGACAGGAATCTGGAAGGGAGGAAGCCCATAAGCTaGGTCTGTGACCTGCTGAGCATCCACAATCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GDRNLEGRKPIS*VCDLLSIHNHT Trigger: TGTGTGATTGTGGATGCTCAGCAGGTCACAGACCAAGCTTATGGGCTTCCTCCCTTCCAGATTCCTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR TCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATCCACCAGAAAGAGGCTaGTTCCATGCAGGTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNPPERG*FHAGQC Trigger: GCACTGACCTGCATGGAATCAGCCTCTTTCTGGTGG...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | ACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATGTCATGTGGTAATTGTTCCATaGCTTTCCTGTCAGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: THCPGTSGTLVGVSAPCHVVIVP*LSCQGV Trigger: TACACCCTGACAGGAAAGGCATGGAACAATTACCAC...ATGACATGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGAGATGGCTGTGTCAATaGGGTCATAGGGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSFKANTVLVVGGEVQRWLCQ*GHRGCL Trigger: CAGACATCCCCTATGACCGCATTGACACAGCCATCT...CTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CCA 90 bp | GCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGGCTGAAAATGTTGGGGCCATACTaGTCAGGCCTCTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: APSRQTQFLSWEERFRLKMLGPY*SGLSVA Trigger: AGCCACAGAGAGGCCTGACCAGTATGGCCCCAACAT...TTTCAGCCTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CCA 90 bp | GCTTCTGGGCTTCTTAGGAGCCTAAGAAGAAGGAACCAAGTCTCAAGGTTATCACCCGCAGGATGGATTTaGGGTGGCCGGGTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLLRSLRRRNQVSRLSPAGWI*GGRVPS Trigger: GGATGGAACCCGGCCACCCCAAATCCATCCTGCGGG...TGATAACCTTGAGACTTGGTTCCTTCTTCTTAGGCTCCTAAGAAGCCCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 72 bp | TGTCTGGTTCTTCCAGACCGCCAGATGTGGAGTCATTaGGGAAGCTGGGCTGTCCTCTCCTCTTATCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: CLVLPDRQMWSH*GSWAVLSSYHY Trigger: GTAGTGATAAGAGGAGAGGACAGCCCAGCTTCCCAAATGACTCCACATCTGGCGGTCTGGAAGAACCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATCATGCAGGTCAGTGCTaGAGAAGGTCCAGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNHAGQC*RRSRVH Trigger: ATGAACCCTGGACCTTCTCCAGCACTGACCTGCATG...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR GCA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATAAGAGGCTGATTCCATaGAGGTCAGTGCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNKRLIP*RSVLEK Trigger: CTTCTCCAGCACTGACCTGCATGGAATCAGCCTCTT...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR GCA 90 bp | GCTTCTGGGCTTCTTAGGAGCCTAAGAAGAAGGAACCAAGTCTCAAGGTTATCATGTCTGTGCCATAGCTaGTCAGCGGCTGTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLLRSLRRRNQVSRLSCLCHS*SAAVGS Trigger: GCTACCCACAGCCGCTGAGCAGCTATGGCACAGACA...TGATAACCTTGAGACTTGGTTCCTTCTTCTTAGGCTCCTAAGAAGCCCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| 3UTR CAA 72 bp | CGTTACACAATTCTCTCCAGACCCATCCCTGAGTTCTaGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYTILSRPIPEF*FKPPLRLPKIQ Trigger: TTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTCTGGAGAGAATTGTGTAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR TCA 90 bp | GAGGTGGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGAGTAGCGGTTACCTTTaGAGAAGACAAAATGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVGSFKANTVLVVGGEVQSSGYL*RRQNVH Trigger: ATGGACATTTTGTCTTCTTCAAAGGTAACCGCTACT...CTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 90 bp | CCTTTCTGGCTTCCCACCTGGATGTGGTGGCTGGGGAGGCCGAGGTaGCTGGTGATCTGGCCGTCCTGGCCGCCGGGGCCTCACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFWLPTWMWWLGRPR*LVIWPSWPPGPHSG Trigger: CCCACTGTGAGGCCCCGGCGGCCAGGACGGCCAGATCACCAGCCACCTCGGCCTCCCCAGCCACCACATCCAGGTGGGAAGCCAGAAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 90 bp | GGACGAGCCACATCGGGCCATCGCGATCGGGGCTCCACGTGCTCCTaGCAGCCCATGAAGTCCCGCAGGATGGATTTGGGGTGGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRATSGHRDRGSTCS*QPMKSRRMDLGWPG Trigger: ACCCGGCCACCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATCGCGATGGCCCGATGTGGCTCGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 90 bp | AGTCCAGAAGCACCAGTAGCAGCGGGAGCAGCGAAGCTCGGCTGCTaGGGCAGCTGCCAGTGCAGCCTGGACGTCCGAGTGCGCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPEAPVAAGAAKLGC*GSCQCSLDVRVRSG Trigger: ACCGGAGCGCACTCGGACGTCCAGGCTGCACTGGCAGCTGCCTCAGCAGCCGAGCTTCGCTGCTCCCGCTGCTACTGGTGCTTCTGGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 90 bp | CATCGGGCCATCGCGATCGGGGCTCCACGTGCTCCTGGCAGCCCATaGAGTCCCGCAGGATGGATTTGGGGTGGCCGGGTTCCATCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HRAIAIGAPRAPGSP*SPAGWIWGGRVPSV Trigger: TACGGATGGAACCCGGCCACCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATCGCGATGGCCCGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 90 bp | AAGGGTGGACGAGCCACATCGGGCCATCGCGATCGGGGCTCCACGTaGTCCTGGCAGCCCATGAAGTCCCGCAGGATGGATTTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGGRATSGHRDRGST*SWQPMKSRRMDLGW Trigger: CCACCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATCGCGATGGCCCGATGTGGCTCGTCCACCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 90 bp | CTCCGCGGAGCACAGCCACTGTGTCGAAGTTGCCATCGCAGATGTTaGGGCCATACTGGTCAGGCCTCTCTGTGGCTCGGGGCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRGAQPLCRSCHRRC*GHTGQASLWLGAGV Trigger: CACCCCAGCCCCGAGCCACAGAGAGGCCTGACCAGTATGGCCCCAACATCTGCGATGGCAACTTCGACACAGTGGCTGTGCTCCGCGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGAGCACCCCCGTTGGGGTaGAAGGGTGGACGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SRWVGRLGGLVWFFQTARAPPLG*KGGRAT Trigger: TGTGGCTCGTCCACCCTTCAACCCCAACGGGGGTGC...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGATGTGGAGGCTCGGCACCCCCGTaGGGGTTGAAGGGTGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: WVGRLGGLVWFFQTARCGGSAPP*GLKGGR Trigger: TCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCC...TCCACATCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 90 bp | GCCCTCATCCTTGTCACCCGCGTTCTCTTCCTTGCTGTCACCATCTaGCTCAGGCTCGGCACCCCCGTTGGGGTTGAAGGGTGGACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALILVTRVLFLAVTI*LRLGTPVGVEGWTS Trigger: GCTCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTGACAGCAAGGAAGAGAACGCGGGTGACAAGGATGAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | TTCCCACAGAAGCCTCCTGCTGACTCCAGGATGAGAAGAGGAAGGGAGGGCCCCATGCGAGGGGCGCCCTaGCGCTGCATCTGCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPQKPPADSRMRRGREGPMRGAP*RCICTR Trigger: TCTGGTGCAGATGCAGCGCAAGGGCGCCCCTCGCAT...GGGGCCCTCCCTTCCTCTTCTCATCCTGGAGTCAGCAGGAGGCTTCTGTGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS GCA 90 bp | AGAGGCCGGGTGGGCTGTGGCTTACCATCTGGGGAGCCATACAGCTaGTGGATGCCCCGAAGGTCATCTTCGGGCAGCTGGAAGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGRVGCGLPSGEPYS*WMPRRSSSGSWKLS Trigger: CGACAACTTCCAGCTGCCCGAAGATGACCTTCGGGGCATCCAGCAGCTGTATGGCTCCCCAGATGGTAAGCCACAGCCCACCCGGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS GCA 90 bp | GCTCCCACCAGATGGCTGTGTCAATGCGGTCATAGGGGATGTCTGTaGCATAGCTGCTCAGCGGCTGTGGGTAGCCGGGCTCCAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: APTRWLCQCGHRGCL*HSCSAAVGSRAPDW Trigger: CCAATCTGGAGCCCGGCTACCCACAGCCGCTGAGCAGCTATGGCACAGACATCCCCTATGACCGCATTGACACAGCCATCTGGTGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS GCA 90 bp | CGTTCACTGTCCGGACCACCTCCTCCATCTGCACCACCACGCGGCTaGCCTCATCCTTGTCACCCGCGTTCTCTTCCTTGCTGTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSGPPPPSAPPRG*PHPCHPRSLPCCHH Trigger: ATGGTGACAGCAAGGAAGAGAACGCGGGTGACAAGGATGAGGGCAGCCGCGTGGTGGTGCAGATGGAGGAGGTGGTCCGGACAGTGAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS-3UTR CAA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATCCCGCAGGATGGATTaGGGGTGGCCGGGTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPSRRMD*GWPGSI Trigger: GATGGAACCCGGCCACCCCAAATCCATCCTGCGGGA...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS GCA 90 bp | GGGTGGGCTGTGGCTTACCATCTGGGGAGCCATACAGCTGCTGGATaGCCCGAAGGTCATCTTCGGGCAGCTGGAAGTTGTCGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWAVAYHLGSHTAAG*PEGHLRAAGSCRYP Trigger: TGGATACCGACAACTTCCAGCTGCCCGAAGATGACCTTCGGGGCATCCAGCAGCTGTATGGCTCCCCAGATGGTAAGCCACAGCCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS CCA 90 bp | CAGTTCTCCGCGGCGTACACTTCGGCGTCTTTAGACGCTGTACCATaGCCCAGACAGTCCAGAAGCACCAGTAGCAGCGGGAGCAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QFSAAYTSASLDAVP*PRQSRSTSSSGSSE Trigger: TTCGCTGCTCCCGCTGCTACTGGTGCTTCTGGACTGTCTGGGCCATGGTACAGCGTCTAAAGACGCCGAAGTGTACGCCGCGGAGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
||
| CDS GCA 90 bp | AGATGGCTGTGTCAATGCGGTCATAGGGGATGTCTGTGCCATAGCTaGTCAGCGGCTGTGGGTAGCCGGGCTCCAGATTGGCTTCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWLCQCGHRGCLCHS*SAAVGSRAPDWLLG Trigger: TCCGAGAAGCCAATCTGGAGCCCGGCTACCCACAGCCGCTGAGCAGCTATGGCACAGACATCCCCTATGACCGCATTGACACAGCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | GCATCCTGCCGCGCCGAGGGAGCATCTGGGATCCACACGTCTCCTGTCCCTGCACGTAGGCGTTCGTTGTaGAATTTCCAGTACTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ASCRAEGASGIHTSPVPARRRSL*NFQYLV Trigger: CACCAAGTACTGGAAATTCAACAACGAACGCCTACG...TGCAGGGACAGGAGACGTGTGGATCCCAGATGCTCCCTCGGCGCGGCAGGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | AATCACACACACTGCCCAGGGACCTCTGGTACCCTAGTGGGTGTGTCTGCCCCATTGTCTAGAACGCGGTaGTGCCTGACTCGCCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: NHTHCPGTSGTLVGVSAPLSRTR*CLTRQN Trigger: GTTCTGGCGAGTCAGGCACAACCGCGTTCTAGACAA...TGGGGCAGACACACCCACTAGGGTACCAGAGGTCCCTGGGCAGTGTGTGTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 90 bp | GTAGCCGAATGTCATCATAGGATACTTCCTGGAAGACCAATGGTGTaGCCTGCTCCCACACTTGGAAAGCCCTGCGCACCGCCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: VAECHHRILPGRPMV*PAPTLGKPCAPPPW Trigger: CCATGGAGGCGGTGCGCAGGGCTTTCCAAGTGTGGGAGCAGGTCACACCATTGGTCTTCCAGGAAGTATCCTATGATGACATTCGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | CTATGGGGCACTGAAAGAGAATATGGGCAGCCTAGGGAAGGAGGAGCTAGTCACTTGCCATCGCAGATGTaGGGGCCATACTGGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LWGTEREYGQPREGGASHLPSQM*GPYWSG Trigger: GCCTGACCAGTATGGCCCCAACATCTGCGATGGCAA...GTGACTAGCTCCTCCTTCCCTAGGCTGCCCATATTCTCTTTCAGTGCCCCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | GAGGTGGGCTCCTTCAAGGCAAACACAGTTCTTGTCGTGGGAGGAGAGGTTCAGCAGAACCAGCGGCCCTaGAACACAAACATCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: EVGSFKANTVLVVGGEVQQNQRP*NTNISP Trigger: CGGAGAGATGTTTGTGTTCAAGGGCCGCTGGTTCTG...CTGAACCTCTCCTCCCACGACAAGAACTGTGTTTGCCTTGAAGGAGCCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGGGTGGGACGATTGGGCGGCCTTGTCTGGTTCTTCCAGACCGCCAGAATCCGTAGGCGTTCGTaGTTGAATTTCCAGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: SRWVGRLGGLVWFFQTARIRRRS*LNFQYL Trigger: CAAGTACTGGAAATTCAACAACGAACGCCTACGGAT...TCTGGCGGTCTGGAAGAACCAGACAAGGCCGCCCAATCGTCCCACCCACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATACCGCCTCCATGGAGTaGTACCAGCCCAGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNTASME*YQPSFS Trigger: TGAGAAGCTGGGCTGGTACAACTCCATGGAGGCGGT...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS-3UTR CAA 90 bp | GACCCATCCCTGAGTTCTTGTTCAAGCCACCTCTCAGGCTGCCCAAAATCCAATTGCTGTGTCTCCTCGTaGAAGCGCCAGTACCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DPSLSSCSSHLSGCPKSNCCVSS*KRQYLS Trigger: AGACAGGTACTGGCGCTTCAACGAGGAGACACAGCA...ATTGGATTTTGGGCAGCCTGAGAGGTGGCTTGAACAAGAACTCAGGGATGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 90 bp | CCATGGAGTTGTACCAGCCCAGCTTCTCAGTGTAGTTCTGGATGCTaGAGGTCAGGTGGTAATTGTTCCATGCCTTTCCTGTCAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PWSCTSPASQCSSGC*RSGGNCSMPFLSGC Trigger: ACACCCTGACAGGAAAGGCATGGAACAATTACCACCTGACCTTCAGCATCCAGAACTACACTGAGAAGCTGGGCTGGTACAACTCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 72 bp | GCACCAGTAGCAGCGGGAGCAGCGAAGCTCGGCTGCTaGGGCAGCTGCCAGTGCAGCCTGGACGTCCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: APVAAGAAKLGC*GSCQCSLDVRV Trigger: CACTCGGACGTCCAGGCTGCACTGGCAGCTGCCTCAGCAGCCGAGCTTCGCTGCTCCCGCTGCTACTGGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 72 bp | CACCATCTGCCTCAGGCTCGGCACCCCCGTTGGGGTTaGAGGGTGGACGAGCCACATCGGGCCATCGCGATC | + |
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Preference number: 6 (lower is better) Translates to: HHLPQARHPRWG*RVDEPHRAIAI Trigger: GATCGCGATGGCCCGATGTGGCTCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 72 bp | ATCGCGATCGGGGCTCCACGTGCTCCTGGCAGCCCATaGAGTCCCGCAGGATGGATTTGGGGTGGCCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: IAIGAPRAPGSP*SPAGWIWGGRV Trigger: AACCCGGCCACCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATCGCGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | CCCACTCCTGCAGTGAGCGCTTGCAGTAGAGCAGCATaGGAGGGGCGCCCTTGCGCTGCATCTGCACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PTPAVSACSRAA*EGRPCAASAPE Trigger: CTCTGGTGCAGATGCAGCGCAAGGGCGCCCCTCGCATGCTGCTCTACTGCAAGCGCTCACTGCAGGAGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | GGATCTGGGCAGAGCGCATGGTGGACATGTGGCGGCTaGGCTGGGGTAGGTAGCCATAGAGCCGCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GSGQSAWWTCGG*AGVGSHRAAAS Trigger: ACTGGCTGCGGCTCTATGGCTACCTACCCCAGCCCAGCCGCCACATGTCCACCATGCGCTCTGCCCAGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | AAACTCTGCATCTCGGCAAGGGCGGAGGCCAGGATCTaGGCAGAGCGCATGGTGGACATGTGGCGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: KLCISARAEARI*AERMVDMWRLG Trigger: GCCCAGCCGCCACATGTCCACCATGCGCTCTGCCCAGATCCTGGCCTCCGCCCTTGCCGAGATGCAGAGTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | ACATCGGGCCATCGCGATCGGGGCTCCACGTGCTCCTaGCAGCCCATGAAGTCCCGCAGGATGGATTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSGHRDRGSTCS*QPMKSRRMDLG Trigger: CCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCACGTGGAGCCCCGATCGCGATGGCCCGATGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 72 bp | TCACCATCTGCCTCAGGCTCGGCACCCCCGTTGGGGTaGAAGGGTGGACGAGCCACATCGGGCCATCGCGAT | + |
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Preference number: 6 (lower is better) Translates to: SPSASGSAPPLG*KGGRATSGHRD Trigger: ATCGCGATGGCCCGATGTGGCTCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 90 bp | ACCACCACGCGGCTGCCCTCATCCTTGTCACCCGCGTTCTCTTCCTaGCTGTCACCATCTGCCTCAGGCTCGGCACCCCCGTTGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TTTRLPSSLSPAFSS*LSPSASGSAPPLGL Trigger: CAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTGACAGCAAGGAAGAGAACGCGGGTGACAAGGATGAGGGCAGCCGCGTGGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 72 bp | TTGCTGTCACCATCTGCCTCAGGCTCGGCACCCCCGTaGGGGTTGAAGGGTGGACGAGCCACATCGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLSPSASGSAPP*GLKGGRATSGH Trigger: ATGGCCCGATGTGGCTCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTGACAGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 90 bp | TTCTCTTCCTTGCTGTCACCATCTGCCTCAGGCTCGGCACCCCCGTaGGGGTTGAAGGGTGGACGAGCCACATCGGGCCATCGCGATCGG | + |
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Preference number: 6 (lower is better) Translates to: FSSLLSPSASGSAPP*GLKGGRATSGHRDR Trigger: CCGATCGCGATGGCCCGATGTGGCTCGTCCACCCTTCAACCCCAACGGGGGTGCCGAGCCTGAGGCAGATGGTGACAGCAAGGAAGAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 90 bp | CGGACCACCTCCTCCATCTGCACCACCACGCGGCTGCCCTCATCCTaGTCACCCGCGTTCTCTTCCTTGCTGTCACCATCTGCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RTTSSICTTTRLPSS*SPAFSSLLSPSASG Trigger: GCCTGAGGCAGATGGTGACAGCAAGGAAGAGAACGCGGGTGACAAGGATGAGGGCAGCCGCGTGGTGGTGCAGATGGAGGAGGTGGTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | GTGGGCTGTGGCTTACCATCTGGGGAGCCATACAGCTaGTGGATGCCCCGAAGGTCATCTTCGGGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VGCGLPSGEPYS*WMPRRSSSGSW Trigger: CCAGCTGCCCGAAGATGACCTTCGGGGCATCCAGCAGCTGTATGGCTCCCCAGATGGTAAGCCACAGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | ATCACCACGTTCACTGTCCGGACCACCTCCTCCATCTaGACCACCACGCGGCTGCCCTCATCCTTGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: ITTFTVRTTSSI*TTTRLPSSLSP Trigger: GGGTGACAAGGATGAGGGCAGCCGCGTGGTGGTGCAGATGGAGGAGGTGGTCCGGACAGTGAACGTGGTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 72 bp | TGCTCCTGGCAGCCCATGAAGTCCCGCAGGATGGATTaGGGGTGGCCGGGTTCCATCCGTAGGCGTTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: CSWQPMKSRRMD*GWPGSIRRRSL Trigger: CAACGAACGCCTACGGATGGAACCCGGCCACCCCAAATCCATCCTGCGGGACTTCATGGGCTGCCAGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | GCACAGCCACTGTGTCGAAGTTGCCATCGCAGATGTTaGGGCCATACTGGTCAGGCCTCTCTGTGGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: AQPLCRSCHRRC*GHTGQASLWLG Trigger: CCCGAGCCACAGAGAGGCCTGACCAGTATGGCCCCAACATCTGCGATGGCAACTTCGACACAGTGGCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | TGTCAATGCGGTCATAGGGGATGTCTGTGCCATAGCTaGTCAGCGGCTGTGGGTAGCCGGGCTCCAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: CQCGHRGCLCHS*SAAVGSRAPDW Trigger: CCAATCTGGAGCCCGGCTACCCACAGCCGCTGAGCAGCTATGGCACAGACATCCCCTATGACCGCATTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | AGATGGCTGTGTCAATGCGGTCATAGGGGATGTCTGTaGCATAGCTGCTCAGCGGCTGTGGGTAGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RWLCQCGHRGCL*HSCSAAVGSRA Trigger: AGCCCGGCTACCCACAGCCGCTGAGCAGCTATGGCACAGACATCCCCTATGACCGCATTGACACAGCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 72 bp | AGCACAGCCACTGTGTCGAAGTTGCCATCGCAGATGTaGGGGCCATACTGGTCAGGCCTCTCTGTGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: STATVSKLPSQM*GPYWSGLSVAR Trigger: CCGAGCCACAGAGAGGCCTGACCAGTATGGCCCCAACATCTGCGATGGCAACTTCGACACAGTGGCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 72 bp | TCCTCCATCTGCACCACCACGCGGCTGCCCTCATCCTaGTCACCCGCGTTCTCTTCCTTGCTGTCACCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSICTTTRLPSS*SPAFSSLLSPS Trigger: AGATGGTGACAGCAAGGAAGAGAACGCGGGTGACAAGGATGAGGGCAGCCGCGTGGTGGTGCAGATGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | GTGGCTTACCATCTGGGGAGCCATACAGCTGCTGGATaGCCCGAAGGTCATCTTCGGGCAGCTGGAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: VAYHLGSHTAAG*PEGHLRAAGSC Trigger: ACAACTTCCAGCTGCCCGAAGATGACCTTCGGGGCATCCAGCAGCTGTATGGCTCCCCAGATGGTAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | GCTCCCACACTTGGAAAGCCCTGCGCACCGCCTCCATaGAGTTGTACCAGCCCAGCTTCTCAGTGTAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: APTLGKPCAPPP*SCTSPASQCSS Trigger: AGAACTACACTGAGAAGCTGGGCTGGTACAACTCCATGGAGGCGGTGCGCAGGGCTTTCCAAGTGTGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CAA 90 bp | ATAGGATACTTCCTGGAAGACCAATGGTGTGACCTGCTCCCACACTaGGAAAGCCCTGCGCACCGCCTCCATGGAGTTGTACCAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IGYFLEDQWCDLLPH*ESPAHRLHGVVPAQ Trigger: CTGGGCTGGTACAACTCCATGGAGGCGGTGCGCAGGGCTTTCCAAGTGTGGGAGCAGGTCACACCATTGGTCTTCCAGGAAGTATCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS GCA 72 bp | TGTGACCTGTGGGCTCCCACCAGATGGCTGTGTCAATaGGGTCATAGGGGATGTCTGTGCCATAGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CDLWAPTRWLCQ*GHRGCLCHSCS Trigger: TGAGCAGCTATGGCACAGACATCCCCTATGACCGCATTGACACAGCCATCTGGTGGGAGCCCACAGGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 72 bp | TGTCATCATAGGATACTTCCTGGAAGACCAATGGTGTaGCCTGCTCCCACACTTGGAAAGCCCTGCGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: CHHRILPGRPMV*PAPTLGKPCAP Trigger: CGGTGCGCAGGGCTTTCCAAGTGTGGGAGCAGGTCACACCATTGGTCTTCCAGGAAGTATCCTATGATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | CCGAATGTCATCATAGGATACTTCCTGGAAGACCAATaGTGTGACCTGCTCCCACACTTGGAAAGCCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PNVIIGYFLEDQ*CDLLPHLESPA Trigger: CGCAGGGCTTTCCAAGTGTGGGAGCAGGTCACACCATTGGTCTTCCAGGAAGTATCCTATGATGACATTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS CCA 72 bp | AGTACCTGTCTGCTTGAAAGAAGAAGGTGTGACCTGTaGGCTCCCACCAGATGGCTGTGTCAATGCGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: STCLLERRRCDL*APTRWLCQCGH Trigger: ATGACCGCATTGACACAGCCATCTGGTGGGAGCCCACAGGTCACACCTTCTTCTTTCAAGCAGACAGGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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| CDS TCA 72 bp | TGTACCAGCCCAGCTTCTCAGTGTAGTTCTGGATGCTaGAGGTCAGGTGGTAATTGTTCCATGCCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CTSPASQCSSGC*RSGGNCSMPFL Trigger: CAGGAAAGGCATGGAACAATTACCACCTGACCTTCAGCATCCAGAACTACACTGAGAAGCTGGGCTGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034243.7 |
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