Pregenerated sensors for MMP12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049723Ensembl transcript IDs: ENSMUST00000005950.12, ENSMUST00000065079.6, ENSMUST00000120655.8, ENSMUST00000127722.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCTCTAAGATGCTGTACATCGGGCACTCCACATCGAGGGATGTaGATTATTGCCAGAGTTGAGTTGTCCAGTTGCCCAGTTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TALRCCTSGTPHRGM*IIARVELSSCPVAS Trigger: AGAAGCAACTGGGCAACTGGACAACTCAACTCTGGCAATAATGCACATCCCTCGATGTGGAGTGCCCGATGTACAGCATCTTAGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR GCA 90 bp | CTGCATCAACCTTCTTCACAGATGCAGAGAAGCCCAGGGAATATATaGTCCTGGGATAGTGTGGCTCTGGTACTAAGTTGTTTATTAACC | + |
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Preference number: 1 (lower is better) Translates to: LHQPSSQMQRSPGNI*SWDSVALVLSCLLT Trigger: GGTTAATAAACAACTTAGTACCAGAGCCACACTATCCCAGGAGCATATATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGGTTGATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR CCA 90 bp | AGAAGCCTTATTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATaGAGCTACCTTTGGAGTCATGTGCTGGCTAGAGAATGCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RSLISSYLLFSLVVI*SYLWSHVLARECFL Trigger: AAGAAAGCATTCTCTAGCCAGCACATGACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAATAAGGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR CCA 90 bp | TACTGTGGCTGTGAAATGAGGTCCCTGAACAGAAACAATGTTGTGTaGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCATGGGTG | + |
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Preference number: 1 (lower is better) Translates to: YCGCEMRSLNRNNVV*NTMVVVRYAVSPWV Trigger: CACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTCAGGGACCTCATTTCACAGCCACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR CCA 90 bp | CAACCTTCTTCACAGATGCAGAGAAGCCCAGGGAATATATGCTCCTaGGATAGTGTGGCTCTGGTACTAAGTTGTTTATTAACCAGTACT | + |
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Preference number: 1 (lower is better) Translates to: QPSSQMQRSPGNICS*DSVALVLSCLLTST Trigger: AGTACTGGTTAATAAACAACTTAGTACCAGAGCCACACTATCCCAGGAGCATATATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR TCA 90 bp | AAATTAATGACCTATCCTATTAAGGACAAAATGCTGTCCTTCCCATaGTGGGACTGTCATCGATCTGCCACCTGCTCTGAGAGTGACAAT | + |
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Preference number: 1 (lower is better) Translates to: KLMTYPIKDKMLSFP*WDCHRSATCSESDN Trigger: ATTGTCACTCTCAGAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCCTTAATAGGATAGGTCATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR GCA 90 bp | GAACAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATaGTGTAAGTCCATGGGTGATAGTTTGAGCAGGAGCACTATGTAC | + |
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Preference number: 1 (lower is better) Translates to: EQKQCCVEYYGGGKV*CKSMGDSLSRSTMY Trigger: GTACATAGTGCTCCTGCTCAAACTATCACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR GCA 90 bp | ATCCACAAAGAAATAAACCTTTTGGCGAAGTGGGTCAAAGACAGCTaGATCAACCTTCTTCACAGATGCAGAGAAGCCCAGGGAATATAT | + |
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Preference number: 1 (lower is better) Translates to: IHKEINLLAKWVKDS*INLLHRCREAQGIY Trigger: ATATATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGGTTGATGCAGCTGTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTTGTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR GCA 90 bp | ATAGGCTCCTTGGAAGATGTAGTAGTGTCTTTTGAAATAGAGGACTaGATCAATTTTAGGCTTGATTCCTGGGAAGTGTGTGGAAATCAG | + |
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Preference number: 1 (lower is better) Translates to: IGSLEDVVVSFEIED*INFRLDSWEVCGNQ Trigger: CTGATTTCCACACACTTCCCAGGAATCAAGCCTAAAATTGATGCAGTCCTCTATTTCAAAAGACACTACTACATCTTCCAAGGAGCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR TCA 90 bp | CCAGTCAGTTTTAACATTGGACATACTTCACAAACTCACAAGCTTTaGGATCTCTACAGCATACACAATACAGAAGATAGGGAGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: PVSFNIGHTSQTHKL*DLYSIHNTEDREPR Trigger: TCTTGGCTCCCTATCTTCTGTATTGTGTATGCTGTAGAGATCTCAAAGCTTGTGAGTTTGTGAAGTATGTCCAATGTTAAAACTGACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR TCA 90 bp | GAATATCAACATGAATGTGAGCCTAATGTGACTCTACTGTGGCTGTaGAATGAGGTCCCTGAACAGAAACAATGTTGTGTGGAATACTAT | + |
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Preference number: 1 (lower is better) Translates to: EYQHECEPNVTLLWL*NEVPEQKQCCVEYY Trigger: ATAGTATTCCACACAACATTGTTTCTGTTCAGGGACCTCATTTCACAGCCACAGTAGAGTCACATTAGGCTCACATTCATGTTGATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR TCA 90 bp | TCAGTTCATTTCAGTCTCCAAAAATGCCTGAATGACAATCTGCTATaGAGGGTTCTCTGTTTCTTGGACAATACACCAGTCAGTTTTAAC | + |
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Preference number: 1 (lower is better) Translates to: SVHFSLQKCLNDNLL*RVLCFLDNTPVSFN Trigger: GTTAAAACTGACTGGTGTATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCATTCAGGCATTTTTGGAGACTGAAATGAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR TCA 90 bp | CTCATGTCATTCCTATTTCAGTTCATTTCAGTCTCCAAAAATGCCTaGATGACAATCTGCTATGAAGGGTTCTCTGTTTCTTGGACAATA | + |
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Preference number: 1 (lower is better) Translates to: LMSFLFQFISVSKNA*MTICYEGFSVSWTI Trigger: TATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCATTCAGGCATTTTTGGAGACTGAAATGAACTGAAATAGGAATGACATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR CCA 90 bp | TCCAAGCTTCAACTTCTTATAGCTATCACATCTCCATTGATGGCTTaGTACAGTCACAGAAAGATTTTATTTAGAAGACCACAGTTATTT | + |
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Preference number: 1 (lower is better) Translates to: SKLQLLIAITSPLMA*YSHRKILFRRPQLF Trigger: AAATAACTGTGGTCTTCTAAATAAAATCTTTCTGTGACTGTACCAAGCCATCAATGGAGATGTGATAGCTATAAGAAGTTGAAGCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGGGGGTCATATTCCAATTGATAGGCTCCTTGGAAGATGTAGTAGTGTCCATTATTGCCAGAGTTaGGTTGTCCAGTTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GTGGHIPIDRLLGRCSSVHYCQS*VVQLPS Trigger: ACTGGGCAACTGGACAACTCAACTCTGGCAATAATG...GACACTACTACATCTTCCAAGGAGCCTATCAATTGGAATATGACCCCCTGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAAACCAGCAAGCACCCTTCACTACATTCTTCCTAACAACCAAACCAGCTGGATTATTGGAATGCTaGAGCCCCAAGGAATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LKNQQAPFTTFFLTTKPAGLLEC*SPKEWP Trigger: TGGCCATTCCTTGGGGCTGCAGCATTCCAATAATCC...AGCTGGTTTGGTTGTTAGGAAGAATGTAGTGAAGGGTGCTTGCTGGTTTTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATAGGGAGCCAAGATGTCAGGACAGAAAATAAAACTGATAGAAGGCAGACCAGGACACAGACATaGCAGGCTCACCATGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: QKIGSQDVRTENKTDRRQTRTQT*QAHHVV Trigger: GACAACATGGTGAGCCTGCCATGTCTGTGTCCTGGT...CTGCCTTCTATCAGTTTTATTTTCTGTCCTGACATCTTGGCTCCCTATCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR TCA 90 bp | CAGATAAACCAGTTGGCCTCTGAACCATGCACTTTCAAAATTAAGAATAGAATGCTGGGGCTGGAGAGATaGCACAGGAGCAAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QINQLASEPCTFKIKNRMLGLER*HRSKEH Trigger: GTGCTCTTTGCTCCTGTGTCATCTCTCCAGCCCCAG...CATTCTATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAACTGGTTTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR TCA 90 bp | AATGTTGGTGGCTGGACTCCCAGGAAGCTTCCACCAGAAGAACCAGTCTTTAAAAAACTCAAGCTTTGGTaGCAGAAAGTTGATGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: NVGGWTPRKLPPEEPVFKKLKLW*QKVDGG Trigger: TCCACCATCAACTTTCTGTCACCAAAGCTTGAGTTT...TTTAAAGACTGGTTCTTCTGGTGGAAGCTTCCTGGGAGTCCAGCCACCAACATT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAGGAAGAGGTTTGTGCCTTGAAAACTTTTAGTCCACGTTTCTGCCTCATCATCCATCTTGACCTCTaGGGCACTGCTCTAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: NKEEVCALKTFSPRFCLIIHLDL*GTALRC Trigger: GCATCTTAGAGCAGTGCCCCAGAGGTCAAGATGGAT...GATGAGGCAGAAACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTTCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR CAA 90 bp | GGTGACACGACGGAACAGGGGGTCATATTCCAATTGATAGGCTCCTaGGAAGATGTAGTAGTGTCTTTTGAAATAGAGGACTGCATCAAT | + |
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Preference number: 2 (lower is better) Translates to: GDTTEQGVIFQLIGS*EDVVVSFEIEDCIN Trigger: ATTGATGCAGTCCTCTATTTCAAAAGACACTACTACATCTTCCAAGGAGCCTATCAATTGGAATATGACCCCCTGTTCCGTCGTGTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | GGAACAGGGGGTCATATTCCAATTGATAGGCTCCTTGGAAGATGTAGTAGTGTCAGCCCAAAGAACTGCTaGATTTCCTGGAGTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GTGGHIPIDRLLGRCSSVSPKNC*ISWSFS Trigger: AGAAAAACTCCAGGAAATGCAGCAGTTCTTTGGGCT...GACACTACTACATCTTCCAAGGAGCCTATCAATTGGAATATGACCCCCTGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATAAACCAGTTGGCCTCTGAACCATGCACTTTCAAAATTAAGAATAGAATGGGGTCCATGAGCTCCTaGCTCACATCATACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QINQLASEPCTFKIKNRMGSMSS*LTSYLQ Trigger: CTGGAGGTATGATGTGAGGCAGGAGCTCATGGACCC...CATTCTATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAACTGGTTTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAAACCAGCAAGCACCCTTCACTACATTCTTCCTAACAACCAAACCAGCTTTGACTTTGGATTATTaGAATGCTGCAGCCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LKNQQAPFTTFFLTTKPALTLDY*NAAAPR Trigger: CCTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAA...AGCTGGTTTGGTTGTTAGGAAGAATGTAGTGAAGGGTGCTTGCTGGTTTTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACTGTTTCTAGGGACCTaGCATCCTCTTCTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTLFLGT*HPLLSS Trigger: AGAAGACAGAAGAGGATGTCAGGTCCCTAGAAACAG...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTCAGGACAGAAAATAAAACTGATAGAAGGCAGACCAGGACACAGACATGGGTGCTGGCTAGAGAATaGTTTCTTGTCTTGGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: DVRTENKTDRRQTRTQTWVLARE*FLVLGL Trigger: TAAACCCAAGACAAGAAAGCATTCTCTAGCCAGCAC...CCATGTCTGTGTCCTGGTCTGCCTTCTATCAGTTTTATTTTCTGTCCTGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATGGAGCTACCTTTGGAGTCTCTTCTACCAGCAGGTaGTACATAAATATGCACATA | + |
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Preference number: 2 (lower is better) Translates to: FPPTSSSVLWSYGATFGVSSTSR*YINMHI Trigger: TATGTGCATATTTATGTACCACCTGCTGGTAGAAGA...GACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR TCA 90 bp | CTGAAAAACCAGCAAGCACCCTTCACTACATTCTTCCTAACAACCAAACCAGCTAAGAGGTTTGTGCCTTaGAAACTTTTAGTCCACGTT | + |
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Preference number: 2 (lower is better) Translates to: LKNQQAPFTTFFLTTKPAKRFVP*KLLVHV Trigger: AACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTT...AGCTGGTTTGGTTGTTAGGAAGAATGTAGTGAAGGGTGCTTGCTGGTTTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAATAGAGGACTGCATCAATTTTAGGCTTGATTCCTGGGAAGTGTGTGGATTGGTGACAGAAAGTTaGTGGTGGACTGCTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: FEIEDCINFRLDSWEVCGLVTES*WWTARF Trigger: AAACCTAGCAGTCCACCATCAACTTTCTGTCACCAA...TCCACACACTTCCCAGGAATCAAGCCTAAAATTGATGCAGTCCTCTATTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTGCAAAGAGCACAGGCTaGTCTTTTAGGAGATATGAA | + |
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Preference number: 2 (lower is better) Translates to: PEQKQCCVEYYGGGKVCCAKSTG*SFRRYE Trigger: TTCATATCTCCTAAAAGAGCAGCCTGTGCTCTTTGC...ACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGCTGCATCAACCTTCTTCACAGATGCAGAGAAGCCCAGGGAATATATGTCTTCTACCAGCAGGTaGTACATAAATATGCACATA | + |
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Preference number: 2 (lower is better) Translates to: KTAASTFFTDAEKPREYMSSTSR*YINMHI Trigger: TATGTGCATATTTATGTACCACCTGCTGGTAGAAGA...CATATATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGGTTGATGCAGCTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACAGAAAATAAAACTGATAGAAGGCAGACCAGGACACAGACATGGCAGGGAAAAATATTATAACTaGGGCTGGAGAGATGACACA | + |
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Preference number: 2 (lower is better) Translates to: SGQKIKLIEGRPGHRHGREKYYN*GWRDDT Trigger: TGTGTCATCTCTCCAGCCCCAGTTATAATATTTTTC...CCTGCCATGTCTGTGTCCTGGTCTGCCTTCTATCAGTTTTATTTTCTGTCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTGGGTTCTCTGTTTCTTaGACAATACACCAGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PEQKQCCVEYYGGGKVCCGFSVS*TIHQSV Trigger: AACTGACTGGTGTATTGTCCAAGAAACAGAGAACCC...ACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR GCA 90 bp | TTACAGATAAACCAGTTGGCCTCTGAACCATGCACTTTCAAAATTAAGAATAGAGTTGAGTTGTCCAGTTaGCCAGTTGCTTCTAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LQINQLASEPCTFKIKNRVELSS*PVASSP Trigger: TGGGCTAGAAGCAACTGGGCAACTGGACAACTCAAC...TCTATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAACTGGTTTATCTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGTCCGTGAGCTCCAAATaGAAAAAGTATCATAATGTC | + |
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Preference number: 2 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRSVSSK*KKYHNV Trigger: GACATTATGATACTTTTTGCATTTGGAGCTCACGGA...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTTCTCCATTGATGGCTTaGTACAGTCACAGAAAGATT | + |
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Preference number: 2 (lower is better) Translates to: PEQKQCCVEYYGGGKVCCSPLMA*YSHRKI Trigger: AATCTTTCTGTGACTGTACCAAGCCATCAATGGAGA...ACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR CCA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGAGAAACAATGTTGTGTaGAATACTATGGTGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRRNNVV*NTMVVV Trigger: TACCACCACCATAGTATTCCACACAACATTGTTTCT...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAATAGAGGACTGCATCAATTTTAGGCTTGATTCCTGGGAAGTGTGTGGAGGTGGGGTACATTATTaGCTTTGGATTATTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: FEIEDCINFRLDSWEVCGGGVHY*LWIIGM Trigger: CATTCCAATAATCCAAAGTCAATAATGTACCCCACC...TCCACACACTTCCCAGGAATCAAGCCTAAAATTGATGCAGTCCTCTATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATTTAGTCCACGTTTCTaGCTCATCAAAATGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTFSPRF*LIKMCI Trigger: GATGCACATTTTGATGAGGCAGAAACGTGGACTAAA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACAATCTGCTATGAAGGGTTCTCTGTTTCTTGGACAATACACCAGTCAGTTTTGGCCTCTGAACCATaGACTTTCAAAATTAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: MTICYEGFSVSWTIHQSVLASEP*TFKIKN Trigger: ATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAA...AACTGACTGGTGTATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR CAA 90 bp | TTTAAAAAGGAAAAGTTGATTTCTGCTTTCAATTTCGTAAGCAGCTaGAATACCAGATGGGATGCTTGGCCATATGGAAGAAATAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FKKEKLISAFNFVSS*NTRWDAWPYGRNRS Trigger: ACTTCTATTTCTTCCATATGGCCAAGCATCCCATCTGGTATTCAAGCTGCTTACGAAATTGAAAGCAGAAATCAACTTTTCCTTTTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATAGTTGAAGTCTCCGTGAGCTCCAAATGCAAAAAGTATCATAATGTCAGCTTGGCCTCTGAACCATaGACTTTCAAAATTAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: KIVEVSVSSKCKKYHNVSLASEP*TFKIKN Trigger: ATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAA...GCTGACATTATGATACTTTTTGCATTTGGAGCTCACGGAGACTTCAACTATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR GCA 72 bp | TTCATCCATCTTGACCTCTGGGGCACTGCTCTAAGATaGTGTACATCGGGCACTCCACATCGAGGGATGTGC | + |
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Preference number: 3 (lower is better) Translates to: FIHLDLWGTALR*CTSGTPHRGMC Trigger: GCACATCCCTCGATGTGGAGTGCCCGATGTACAGCATCTTAGAGCAGTGCCCCAGAGGTCAAGATGGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR TCA 72 bp | AGTGTGTGGAAATCAGCTTGGGGTAAGCAGGGTCCATaGGCTCCTGCCTCACATCATACCTCCAGTAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: SVWKSAWGKQGP*APASHHTSSSV Trigger: AACACTACTGGAGGTATGATGTGAGGCAGGAGCTCATGGACCCTGCTTACCCCAAGCTGATTTCCACACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR CCA 72 bp | TGGACTGCTAGGTTTTGTCAAGGATGGGGGTTTCACTaGGGCTCCATAGAGGGACTGAATGTTACGTATGTC | + |
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Preference number: 3 (lower is better) Translates to: WTARFCQGWGFH*GSIEGLNVTYV Trigger: GACATACGTAACATTCAGTCCCTCTATGGAGCCCCAGTGAAACCCCCATCCTTGACAAAACCTAGCAGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| 3UTR TCA 72 bp | ACCTATCCTATTAAGGACAAAATGCTGTCCTTCCCATaGTGGGACTGTCATCGATCTGCCACCTGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TYPIKDKMLSFP*WDCHRSATCSE Trigger: CTCAGAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCCTTAATAGGATAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
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| 3UTR GCA 72 bp | GGGATGTGCATTATTGCCAGAGTTGAGTTGTCCAGTTaGCCAGTTGCTTCTAGCCCAAAGAACTGCTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: GMCIIARVELSS*PVASSPKNCCI Trigger: AATGCAGCAGTTCTTTGGGCTAGAAGCAACTGGGCAACTGGACAACTCAACTCTGGCAATAATGCACATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR GCA 72 bp | CCTTCTTCACAGATGCAGAGAAGCCCAGGGAATATATaGTCCTGGGATAGTGTGGCTCTGGTACTAAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSSQMQRSPGNI*SWDSVALVLSC Trigger: ACAACTTAGTACCAGAGCCACACTATCCCAGGAGCATATATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACAAAATGCTGTCCTTCCCATGATGGGACTGTCATCGATCTGCCACCTGCTCTTTCCTGTTACATTATaGCCACATAGTTACACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GQNAVLPMMGLSSICHLLFPVTL*PHSYTL Trigger: CAGGGTGTAACTATGTGGCAATAATGTAACAGGAAA...GAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATGGAGCTACCTTTGGAGTCGCTATCACATCTCCATaGATGGCTTGGTACAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FPPTSSSVLWSYGATFGVAITSP*MAWYSH Trigger: GTGACTGTACCAAGCCATCAATGGAGATGTGATAGC...GACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAACCGCTTCATCCATCTaGACCTCTGGGGCACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTTASSI*TSGALL Trigger: GAGCAGTGCCCCAGAGGTCAAGATGGATGAAGCGGT...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | GACAGCATCAAAACTCAAGCTTTGGTGACAGAAAGTTaGTGGTGGACTGCTAGGTTTTGTCAAGGATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DSIKTQALVTES*WWTARFCQGWG Trigger: CCCCCATCCTTGACAAAACCTAGCAGTCCACCATCAACTTTCTGTCACCAAAGCTTGAGTTTTGATGCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR GCA 72 bp | GAAATAAACCTTTTGGCGAAGTGGGTCAAAGACAGCTaGATCAACCTTCTTCACAGATGCAGAGAAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EINLLAKWVKDS*INLLHRCREAQ Trigger: CTGGGCTTCTCTGCATCTGTGAAGAAGGTTGATGCAGCTGTCTTTGACCCACTTCGCCAAAAGGTTTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR CCA 72 bp | ATTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATaGAGCTACCTTTGGAGTCATGTGCTGGCTAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ISSYLLFSLVVI*SYLWSHVLARE Trigger: TTCTCTAGCCAGCACATGACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR GCA 72 bp | TGGAGCTACCTTTGGAGTCATGTGCTGGCTAGAGAATaGTTTCTTGTCTTGGGTTTAGACTGCTGTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: WSYLWSHVLARE*FLVLGLDCCSY Trigger: GTATGAACAGCAGTCTAAACCCAAGACAAGAAAGCATTCTCTAGCCAGCACATGACTCCAAAGGTAGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR GCA 72 bp | CAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATaGTGTAAGTCCATGGGTGATAGTTTGAGCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QCCVEYYGGGKV*CKSMGDSLSRS Trigger: GCTCCTGCTCAAACTATCACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CCA 72 bp | GAAATAGAGGACTGCATCAATTTTAGGCTTGATTCCTaGGAAGTGTGTGGAAATCAGCTTGGGGTAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EIEDCINFRLDS*EVCGNQLGVSR Trigger: CCTGCTTACCCCAAGCTGATTTCCACACACTTCCCAGGAATCAAGCCTAAAATTGATGCAGTCCTCTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTGTTTATCCACAAAGAAATAAACCTTTTGGCGAAGTGGGTCAAAGACAGCATTGCCAGAGTTGAGTaGTCCAGTTGCCCAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVFIHKEINLLAKWVKDSIARVE*SSCPVA Trigger: AGCAACTGGGCAACTGGACAACTCAACTCTGGCAAT...GCTGTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTTGTGGATAAACACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTGGTGGCTGGACTCCCAGGAAGCTTCCACCAGAAGAACCAGTCTTTAAACACATCACTCCAGACTaGGAAAGCTTTCTGAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: NVGGWTPRKLPPEEPVFKHITPD*ESFLKY Trigger: ATATTTCAGAAAGCTTTCCAAGTCTGGAGTGATGTG...TTTAAAGACTGGTTCTTCTGGTGGAAGCTTCCTGGGAGTCCAGCCACCAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGGCATCAATTTTAGGCTaGATTCCTGGGAAGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRASILG*IPGKCV Trigger: CACACACTTCCCAGGAATCAAGCCTAAAATTGATGC...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | CATGAATGTGAGCCTAATGTGACTCTACTGTGGCTGTaGAATGAGGTCCCTGAACAGAAACAATGTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HECEPNVTLLWL*NEVPEQKQCCV Trigger: CACACAACATTGTTTCTGTTCAGGGACCTCATTTCACAGCCACAGTAGAGTCACATTAGGCTCACATTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CCA 72 bp | TCACAGATGCAGAGAAGCCCAGGGAATATATGCTCCTaGGATAGTGTGGCTCTGGTACTAAGTTGTTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: SQMQRSPGNICS*DSVALVLSCLL Trigger: TAATAAACAACTTAGTACCAGAGCCACACTATCCCAGGAGCATATATTCCCTGGGCTTCTCTGCATCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCATGGGTGATCTCCATTGATGGCTaGGTACAGTCACAGAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NVVWNTMVVVRYAVSPWVISIDG*VQSQKD Trigger: ATCTTTCTGTGACTGTACCAAGCCATCAATGGAGAT...CACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR TCA 72 bp | AGGCCACATAGCAATGCTACAACCCACTTTCTGATGTaGAATGAGCCACACAACACATCTAACAAGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RPHSNATTHFLM*NEPHNTSNKNR Trigger: TCTGTTCTTGTTAGATGTGTTGTGTGGCTCATTTCACATCAGAAAGTGGGTTGTAGCATTGCTATGTGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR TCA 72 bp | GTGGTAAGGTATGCTGTAAGTCCATGGGTGATAGTTTaGGCAGGAGCACTATGTACAGGAAATGCAAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: VVRYAVSPWVIV*AGALCTGNANS Trigger: TGAATTTGCATTTCCTGTACATAGTGCTCCTGCTCAAACTATCACCCATGGACTTACAGCATACCTTACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGAAAGAAATAAACCTTTaGGCGAAGTGGGTCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRKEINL*AKWVKD Trigger: GTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTT...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | TTCAGTCTCCAAAAATGCCTGAATGACAATCTGCTATaGAGGGTTCTCTGTTTCTTGGACAATACACCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSLQKCLNDNLL*RVLCFLDNTPV Trigger: GACTGGTGTATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCATTCAGGCATTTTTGGAGACTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CCA 72 bp | TGTGAAATGAGGTCCCTGAACAGAAACAATGTTGTGTaGAATACTATGGTGGTGGTAAGGTATGCTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CEMRSLNRNNVV*NTMVVVRYAVS Trigger: ACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTGTTCAGGGACCTCATTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTGTTTATCCACAAAGAAATAAACCTTTTGGCGAAGTGGGTCAAAGACAGCAAAATGTGCATCTCCTaGAATACCAGGTCCAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: VVFIHKEINLLAKWVKDSKMCIS*NTRSRI Trigger: TATCCTGGACCTGGTATTCAAGGAGATGCACATTTT...GCTGTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTTGTGGATAAACACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATTTCCTGTTACATTATaGCCACATAGTTACACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTFPVTL*PHSYTL Trigger: CAGGGTGTAACTATGTGGCAATAATGTAACAGGAAA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | TCTTGTCTTGGGTTTAGACTGCTGTTCATACACAAGTaGTTAAAAGGACTCCAAGCTTCAACTTCTTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: SCLGFRLLFIHK*LKGLQASTSYS Trigger: GCTATAAGAAGTTGAAGCTTGGAGTCCTTTTAATCACTTGTGTATGAACAGCAGTCTAAACCCAAGACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR GCA 72 bp | GCCATCAAAATAGTTGAAGTCTCCGTGAGCTCCAAATaGAAAAAGTATCATAATGTCAGCCTCATCTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: AIKIVEVSVSSK*KKYHNVSLIFM Trigger: CATAAAGATGAGGCTGACATTATGATACTTTTTGCATTTGGAGCTCACGGAGACTTCAACTATTTTGATGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | TTCCTATTTCAGTTCATTTCAGTCTCCAAAAATGCCTaGATGACAATCTGCTATGAAGGGTTCTCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLFQFISVSKNA*MTICYEGFSVS Trigger: AGAAACAGAGAACCCTTCATAGCAGATTGTCATTCAGGCATTTTTGGAGACTGAAATGAACTGAAATAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGATAAACCAGTTGGCCTCTGAACCATGCACTTTCAAAATTAAGAATAGAATGGGTACATTATTGACTTaGGATTATTGGAATGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QINQLASEPCTFKIKNRMGTLLT*DYWNAA Trigger: TGCAGCATTCCAATAATCCAAAGTCAATAATGTACC...CATTCTATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAACTGGTTTATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR TCA 72 bp | TTTAACATTGGACATACTTCACAAACTCACAAGCTTTaGGATCTCTACAGCATACACAATACAGAAGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: FNIGHTSQTHKL*DLYSIHNTEDR Trigger: CCTATCTTCTGTATTGTGTATGCTGTAGAGATCTCAAAGCTTGTGAGTTTGTGAAGTATGTCCAATGTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CCA 72 bp | CAACTTCTTATAGCTATCACATCTCCATTGATGGCTTaGTACAGTCACAGAAAGATTTTATTTAGAAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: QLLIAITSPLMA*YSHRKILFRRP Trigger: TGGTCTTCTAAATAAAATCTTTCTGTGACTGTACCAAGCCATCAATGGAGATGTGATAGCTATAAGAAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR TCA 90 bp | GGACAAAATGCTGTCCTTCCCATGATGGGACTGTCATCGATCTGCCACCTGCTCGGTAAGCAGGGTCCATaGGCTCCTGCCTCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQNAVLPMMGLSSICHLLGKQGP*APASHH Trigger: ATGATGTGAGGCAGGAGCTCATGGACCCTGCTTACC...GAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | GGACAAAATGCTGTCCTTCCCATGATGGGACTGTCATCGATCTGCCACCTGCTCATTCACTGTCATTCATaGGAGCAGCCCCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQNAVLPMMGLSSICHLLIHCHS*EQPHRQ Trigger: CTGCCTGTGGGGCTGCTCCCATGAATGACAGTGAAT...GAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CAA 72 bp | GGCAGACCAGGACACAGACATGGCAGGCTCACCATGTaGTCTTTTTCCTGTGACAAACAAAGCGTGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPGHRHGRLTM*SFSCDKQSVCY Trigger: GTAGCACACGCTTTGTTTGTCACAGGAAAAAGACAACATGGTGAGCCTGCCATGTCTGTGTCCTGGTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CAA 72 bp | GGGATGCTTGGCCATATGGAAGAAATAGAAGTAATGTaGGTGGCTGGACTCCCAGGAAGCTTCCACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMLGHMEEIEVM*VAGLPGSFHQK Trigger: CTTCTGGTGGAAGCTTCCTGGGAGTCCAGCCACCAACATTACTTCTATTTCTTCCATATGGCCAAGCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCATGGGTGGGGTCCATGAGCTCCTaGCTCACATCATACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVVWNTMVVVRYAVSPWVGSMSS*LTSYLQ Trigger: CTGGAGGTATGATGTGAGGCAGGAGCTCATGGACCC...CACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCGGGTCCATGAGCTCCTaGCTCACATCATACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSGSMSS*LTSYLQ Trigger: CTGGAGGTATGATGTGAGGCAGGAGCTCATGGACCC...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | GGACAAAATGCTGTCCTTCCCATGATGGGACTGTCATCGATCTGCCACCTGCTCGGTGGGGTACATTATTaGCTTTGGATTATTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GQNAVLPMMGLSSICHLLGGVHY*LWIIGM Trigger: CATTCCAATAATCCAAAGTCAATAATGTACCCCACC...GAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGATTCACTGTCATTCATaGGAGCAGCCCCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARIHCHS*EQPHRQ Trigger: CTGCCTGTGGGGCTGCTCCCATGAATGACAGTGAAT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAGGTAAGCAGGGTCCATaGGCTCCTGCCTCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTGKQGP*APASHH Trigger: ATGATGTGAGGCAGGAGCTCATGGACCCTGCTTACC...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGTTGAGTTGTCCAGTTaGCCAGTTGCTTCTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARVELSS*PVASSP Trigger: TGGGCTAGAAGCAACTGGGCAACTGGACAACTCAAC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCGGATTATTGGAATGCTaGAGCCCCAAGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSGLLEC*SPKEWP Trigger: TGGCCATTCCTTGGGGCTGCAGCATTCCAATAATCC...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGGATTATTGGAATGCTaGAGCCCCAAGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARGLLEC*SPKEWP Trigger: TGGCCATTCCTTGGGGCTGCAGCATTCCAATAATCC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGATCCATCTTGACCTCTaGGGCACTGCTCTAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARIHLDL*GTALRC Trigger: GCATCTTAGAGCAGTGCCCCAGAGGTCAAGATGGAT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAAGGAGGGTCATCTGTaGCTTTTGATTGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARKEGHL*LLIGRQ Trigger: CTGCCTGCCAATCAAAAGCCACAGATGACCCTCCTT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| 3UTR CAA 72 bp | ACAGAAGCCTTATTTCCTCCTACCTCCTCTTCAGTCTaGTGGTCATATGGAGCTACCTTTGGAGTCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEALFPPTSSSV*WSYGATFGVMC Trigger: GCACATGACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAATAAGGCTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGCATTATTGCCAGAGTTaGGTTGTCCAGTTGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARHYCQS*VVQLPS Trigger: ACTGGGCAACTGGACAACTCAACTCTGGCAATAATG...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCCATTATTGCCAGAGTTaGGTTGTCCAGTTGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSHYCQS*VVQLPS Trigger: ACTGGGCAACTGGACAACTCAACTCTGGCAATAATG...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATGGAGCTACCTTTGGAGTCAAACTCAAGCTTTGGTaGCAGAAAGTTGATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPPTSSSVLWSYGATFGVKLKLW*QKVDGG Trigger: TCCACCATCAACTTTCTGTCACCAAAGCTTGAGTTT...GACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR TCA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGTCTCTCCCACTGTTGTaGCAGCATCAAAACTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRSLPLL*QHQNSS Trigger: GCTTGAGTTTTGATGCTGTCACAACAGTGGGAGAGA...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGCTTCCCTAGCAATGTaGCAAACATTGATGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARASLAM*QTLMLL Trigger: CAGCAGCATCAATGTTTGTCACATTGCTAGGGAAGC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGTCATCTGTGGCTTTTaGTTGGCAGGCAGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARVICGF*LAGSKV Trigger: TACTTTGCTGCCTGCCAATCAAAAGCCACAGATGAC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | TGTTGTCTTTTTCCTGTGACAAACAAAGCGTGTGCTACTCATAGTTCCTCCTGTGTTGAGTTGTCCAGTTaGCCAGTTGCTTCTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCLFPVTNKACATHSSSCVELSS*PVASSP Trigger: TGGGCTAGAAGCAACTGGGCAACTGGACAACTCAAC...ACAGGAGGAACTATGAGTAGCACACGCTTTGTTTGTCACAGGAAAAAGACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGGTTGAGTTGTCCAGTTaGCCAGTTGCTTCTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEVELSS*PVASSP Trigger: TGGGCTAGAAGCAACTGGGCAACTGGACAACTCAAC...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTGGATTATTGGAATGCTaGAGCCCCAAGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCDLYTSPYFLLHYCHIVGLLEC*SPKEWP Trigger: TGGCCATTCCTTGGGGCTGCAGCATTCCAATAATCC...AACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAAATAGAGGACTGCATCAATTTTAGGCTTGATTCCTGGGAAGTGTGTGGAATTCACTGTCATTCATaGGAGCAGCCCCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FEIEDCINFRLDSWEVCGIHCHS*EQPHRQ Trigger: CTGCCTGTGGGGCTGCTCCCATGAATGACAGTGAAT...TCCACACACTTCCCAGGAATCAAGCCTAAAATTGATGCAGTCCTCTATTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGTTCCTGGGAAGTGTGTaGAAATCAGCTTGGGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRFLGSV*KSAWGK Trigger: CTTACCCCAAGCTGATTTCCACACACTTCCCAGGAA...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCTTCCTGGGAAGTGTGTaGAAATCAGCTTGGGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSFLGSV*KSAWGK Trigger: CTTACCCCAAGCTGATTTCCACACACTTCCCAGGAA...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGCAGGCAGCAAAGTATaGGCTGTTCAGGAACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARAGSKV*AVQEQN Trigger: ATTCTGTTCCTGAACAGCCCATACTTTGCTGCCTGC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTCTGTGGCTTTTGATTaGCAGGCAGCAAAGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARSVAFD*QAAKYG Trigger: CCCATACTTTGCTGCCTGCCAATCAAAAGCCACAGA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGTCTCTCCCACTGTTGTaGCAGCATCAAAACTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPVTLLPHSYTLSIESLPLL*QHQNSS Trigger: GCTTGAGTTTTGATGCTGTCACAACAGTGGGAGAGA...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGCTTGTGAAGCTTAGCTaGAAATGTAGACAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARLVKLS*KCRQGG Trigger: CCCTCCTTGTCTACATTTTCAGCTAAGCTTCACAAG...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | TCAGGACAGAAAATAAAACTGATAGAAGGCAGACCAGGACACAGACATGGCAGGAGCCCAAAGAACTGCTaGATTTCCTGGAGTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQKIKLIEGRPGHRHGRSPKNC*ISWSFS Trigger: AGAAAAACTCCAGGAAATGCAGCAGTTCTTTGGGCT...CCTGCCATGTCTGTGTCCTGGTCTGCCTTCTATCAGTTTTATTTTCTGTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | ATGACAATCTGCTATGAAGGGTTCTCTGTTTCTTGGACAATACACCAGTCAGTTATCCATCTTGACCTCTaGGGCACTGCTCTAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MTICYEGFSVSWTIHQSVIHLDL*GTALRC Trigger: GCATCTTAGAGCAGTGCCCCAGAGGTCAAGATGGAT...AACTGACTGGTGTATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | GATGTCAGGACAGAAAATAAAACTGATAGAAGGCAGACCAGGACACAGACATGGTTGACTTTGGATTATTaGAATGCTGCAGCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVRTENKTDRRQTRTQTWLTLDY*NAAAPR Trigger: CCTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAA...CCATGTCTGTGTCCTGGTCTGCCTTCTATCAGTTTTATTTTCTGTCCTGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTTGACTTTGGATTATTaGAATGCTGCAGCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARLTLDY*NAAAPR Trigger: CCTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCTTGACTTTGGATTATTaGAATGCTGCAGCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSLTLDY*NAAAPR Trigger: CCTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAA...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| 3UTR CAA 72 bp | TTTGGTGACACGACGGAACAGGGGGTCATATTCCAATaGATAGGCTCCTTGGAAGATGTAGTAGTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGDTTEQGVIFQ*IGSLEDVVVSF Trigger: AAAAGACACTACTACATCTTCCAAGGAGCCTATCAATTGGAATATGACCCCCTGTTCCGTCGTGTCACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACATTATTGCCAGAGTTaGGTTGTCCAGTTGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTHYCQS*VVQLPS Trigger: ACTGGGCAACTGGACAACTCAACTCTGGCAATAATG...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCTTTTTCCTGTGACAAACAAAGCGTGTGCTACTCATAGTTCCTCCTGTTTGGTGACAGAAAGTTaGTGGTGGACTGCTAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CCLFPVTNKACATHSSSCLVTES*WWTARF Trigger: AAACCTAGCAGTCCACCATCAACTTTCTGTCACCAA...ACAGGAGGAACTATGAGTAGCACACGCTTTGTTTGTCACAGGAAAAAGACAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAGCCCAAAGAACTGCTaGATTTCCTGGAGTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARSPKNC*ISWSFS Trigger: AGAAAAACTCCAGGAAATGCAGCAGTTCTTTGGGCT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCTGCCTCATCAAAATGTaGATCTCCTTGAATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSCLIKM*ISLNTR Trigger: CCTGGTATTCAAGGAGATGCACATTTTGATGAGGCA...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTGCCTCATCAAAATGTaGATCTCCTTGAATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARCLIKM*ISLNTR Trigger: CCTGGTATTCAAGGAGATGCACATTTTGATGAGGCA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTAACCTTCTTCACAGATaGAGAGAAGCCCAGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VCDLYTSPYFLLHYCHIVNLLHR*REAQGI Trigger: TATTCCCTGGGCTTCTCTGCATCTGTGAAGAAGGTT...AACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAAAACACAAGCATTaGACACGGTTGTATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSIKHKH*TRLYAA Trigger: GGCTGCATACAACCGTGTGCAATGCTTGTGTTTTAT...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTGGAAGGATTTCCCATaGACATCCAGAGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARWKDFP*TSRVSL Trigger: CAAAGAAACTCTGGATGTCCATGGGAAATCCTTCCA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAGGAACAGAATGTACTaGAAGGATTTCCCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARRNRMY*KDFPWT Trigger: TGTCCATGGGAAATCCTTCCAGTACATTCTGTTCCT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| 3UTR CAA 72 bp | ACGGAACAGGGGGTCATATTCCAATTGATAGGCTCCTaGGAAGATGTAGTAGTGTCTTTTGAAATAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEQGVIFQLIGS*EDVVVSFEIED Trigger: GTCCTCTATTTCAAAAGACACTACTACATCTTCCAAGGAGCCTATCAATTGGAATATGACCCCCTGTTCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAAGAGGTTTGTGCCTTaGAAACTTTTAGTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARKRFVP*KLLVHV Trigger: AACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGGTGGGGTACATTATTaGCTTTGGATTATTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARGGVHY*LWIIGM Trigger: CATTCCAATAATCCAAAGTCAATAATGTACCCCACC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATTGGTGACAGAAAGTTaGTGGTGGACTGCTAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTLVTES*WWTARF Trigger: AAACCTAGCAGTCCACCATCAACTTTCTGTCACCAA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTTTAGTCCACGTTTCTaGCTCATCAAAATGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARFSPRF*LIKMCI Trigger: GATGCACATTTTGATGAGGCAGAAACGTGGACTAAA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCTTTAGTCCACGTTTCTaGCTCATCAAAATGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSFSPRF*LIKMCI Trigger: GATGCACATTTTGATGAGGCAGAAACGTGGACTAAA...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTCAGCCTCATCTTTATaGAGCTTTCTGAATCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARSASSL*SFLNLR Trigger: TCTAAGATTCAGAAAGCTTCATAAAGATGAGGCTGA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGAAGAGGTTTGTGCCTTaGAAACTTTTAGTCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEKRFVP*KLLVHV Trigger: AACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTT...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGGGTGGGGTACATTATTaGCTTTGGATTATTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEGGVHY*LWIIGM Trigger: CATTCCAATAATCCAAAGTCAATAATGTACCCCACC...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAAAACTCAAGCTTTGGTaGCAGAAAGTTGATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTKLKLW*QKVDGG Trigger: TCCACCATCAACTTTCTGTCACCAAAGCTTGAGTTT...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR TCA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGTGTAGTAGTGTCTTTTaGAATAGAGGACTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRCSSVF*NRGLHQ Trigger: TTGATGCAGTCCTCTATTTCAAAAGACACTACTACA...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR GCA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCTCCGTGAGCTCCAAATaGAAAAAGTATCATAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSSVSSK*KKYHNV Trigger: GACATTATGATACTTTTTGCATTTGGAGCTCACGGA...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGTCCGTGAGCTCCAAATaGAAAAAGTATCATAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: STDKTLKLFPAWLQSVARSVSSK*KKYHNV Trigger: GACATTATGATACTTTTTGCATTTGGAGCTCACGGA...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR GCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATGCCTCATCAAAATGTaGATCTCCTTGAATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTCLIKM*ISLNTR Trigger: CCTGGTATTCAAGGAGATGCACATTTTGATGAGGCA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTCTTTTTCCTGTGACAAACAAAGCGTGTGCTACTCATAGTTCCTCCTGTTTTAGTCCACGTTTCTaGCTCATCAAAATGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCLFPVTNKACATHSSSCFSPRF*LIKMCI Trigger: GATGCACATTTTGATGAGGCAGAAACGTGGACTAAA...ACAGGAGGAACTATGAGTAGCACACGCTTTGTTTGTCACAGGAAAAAGACAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTTGTAGTAGTGTCTTTTaGAATAGAGGACTGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCDLYTSPYFLLHYCHIVCSSVF*NRGLHQ Trigger: TTGATGCAGTCCTCTATTTCAAAAGACACTACTACA...AACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| 3UTR CAA 72 bp | AAGTTCATGAACAGCAACAAGGAAGAGGTTTGTGCCTaGAAAACTTTTAGTCCACGTTTCTGCCTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFMNSNKEEVCA*KTFSPRFCLIK Trigger: TTTGATGAGGCAGAAACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTTCCTTGTTGCTGTTCATGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| 3UTR CAA 72 bp | GAAAAGTTGATTTCTGCTTTCAATTTCGTAAGCAGCTaGAATACCAGATGGGATGCTTGGCCATATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKLISAFNFVSS*NTRWDAWPYGR Trigger: TCTTCCATATGGCCAAGCATCCCATCTGGTATTCAAGCTGCTTACGAAATTGAAAGCAGAAATCAACTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATCAGCCTCATCTTTATaGAGCTTTCTGAATCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTSASSL*SFLNLR Trigger: TCTAAGATTCAGAAAGCTTCATAAAGATGAGGCTGA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACATCCGTGAGCTCCAAATaGAAAAAGTATCATAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTSVSSK*KKYHNV Trigger: GACATTATGATACTTTTTGCATTTGGAGCTCACGGA...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGGGAAAAGTTGATTTCTaGTTTCAATTTCGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEGKVDF*FQFRKQ Trigger: CTGCTTACGAAATTGAAAGCAGAAATCAACTTTTCC...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR GCA 90 bp | CAGATAAACCAGTTGGCCTCTGAACCATGCACTTTCAAAATTAAGAATAGAATGGGAAAAGTTGATTTCTaGTTTCAATTTCGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QINQLASEPCTFKIKNRMGKVDF*FQFRKQ Trigger: CTGCTTACGAAATTGAAAGCAGAAATCAACTTTTCC...CATTCTATTCTTAATTTTGAAAGTGCATGGTTCAGAGGCCAACTGGTTTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| 3UTR CAA 72 bp | TCCAAGCTTCAACTTCTTATAGCTATCACATCTCCATaGATGGCTTGGTACAGTCACAGAAAGATTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SKLQLLIAITSP*MAWYSHRKILF Trigger: AAATAAAATCTTTCTGTGACTGTACCAAGCCATCAATGGAGATGTGATAGCTATAAGAAGTTGAAGCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | CTGACATCCTCTTCTGTCTTCTACCAGCAGGTGGTACATAAATATGCACATAGGACCGCTTCATCCATCTaGACCTCTGGGGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSSVFYQQVVHKYAHRTASSI*TSGALL Trigger: GAGCAGTGCCCCAGAGGTCAAGATGGATGAAGCGGT...CCTATGTGCATATTTATGTACCACCTGCTGGTAGAAGACAGAAGAGGATGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGACCGCTTCATCCATCTaGACCTCTGGGGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARTASSI*TSGALL Trigger: GAGCAGTGCCCCAGAGGTCAAGATGGATGAAGCGGT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCACCGCTTCATCCATCTaGACCTCTGGGGCACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSTASSI*TSGALL Trigger: GAGCAGTGCCCCAGAGGTCAAGATGGATGAAGCGGT...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | GGACAAAATGCTGTCCTTCCCATGATGGGACTGTCATCGATCTGCCACCTGCTCATTGACTTTGGATTATaGGAATGCTGCAGCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GQNAVLPMMGLSSICHLLIDFGL*ECCSPK Trigger: CTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAAT...GAGCAGGTGGCAGATCGATGACAGTCCCATCATGGGAAGGACAGCATTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGATTGCCAGAGTTGAGTaGTCCAGTTGCCCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARIARVE*SSCPVA Trigger: AGCAACTGGGCAACTGGACAACTCAACTCTGGCAAT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGGTCATCTGTGGCTTTaGATTGGCAGGCAGCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARGHLWL*IGRQQS Trigger: ACTTTGCTGCCTGCCAATCAAAAGCCACAGATGACC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | TGTTGTCTTTTTCCTGTGACAAACAAAGCGTGTGCTACTCATAGTTCCTCCTGTATTGCCAGAGTTGAGTaGTCCAGTTGCCCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCLFPVTNKACATHSSSCIARVE*SSCPVA Trigger: AGCAACTGGGCAACTGGACAACTCAACTCTGGCAAT...ACAGGAGGAACTATGAGTAGCACACGCTTTGTTTGTCACAGGAAAAAGACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGATTGCCAGAGTTGAGTaGTCCAGTTGCCCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEIARVE*SSCPVA Trigger: AGCAACTGGGCAACTGGACAACTCAACTCTGGCAAT...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGAGGGATGTGCATTATaGCCAGAGTTGAGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVAREGCAL*PELSCP Trigger: TGGACAACTCAACTCTGGCAATAATGCACATCCCTC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGATTGACTTTGGATTATaGGAATGCTGCAGCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARIDFGL*ECCSPK Trigger: CTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAAT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATTGACTTTGGATTATaGGAATGCTGCAGCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSIDFGL*ECCSPK Trigger: CTTGGGGCTGCAGCATTCCAATAATCCAAAGTCAAT...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATGGAGCTACCTTTGGAGTCAAAGAAATAAACCTTTaGGCGAAGTGGGTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPPTSSSVLWSYGATFGVKEINL*AKWVKD Trigger: GTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTT...GACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCATGGGTGGCATCAATTTTAGGCTaGATTCCTGGGAAGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVVWNTMVVVRYAVSPWVASILG*IPGKCV Trigger: CACACACTTCCCAGGAATCAAGCCTAAAATTGATGC...CACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCGCATCAATTTTAGGCTaGATTCCTGGGAAGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSASILG*IPGKCV Trigger: CACACACTTCCCAGGAATCAAGCCTAAAATTGATGC...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | ATGACAATCTGCTATGAAGGGTTCTCTGTTTCTTGGACAATACACCAGTCAGTTGAGGGATGTGCATTATaGCCAGAGTTGAGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MTICYEGFSVSWTIHQSVEGCAL*PELSCP Trigger: TGGACAACTCAACTCTGGCAATAATGCACATCCCTC...AACTGACTGGTGTATTGTCCAAGAAACAGAGAACCCTTCATAGCAGATTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAAAATGTGCATCTCCTaGAATACCAGGTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARKMCIS*NTRSRI Trigger: TATCCTGGACCTGGTATTCAAGGAGATGCACATTTT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGAAGAGGTTTGTGCCTaGAAAACTTTTAGTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVAREEVCA*KTFSPR Trigger: ACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTTC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCCTACCTCCTCTTCAGTCTTGTGGTCATATGGAGCTACCTTTGGAGTCAGGTGGGGTACATTATaGACTTTGGATTATTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPPTSSSVLWSYGATFGVRWGTL*TLDYWN Trigger: ATTCCAATAATCCAAAGTCAATAATGTACCCCACCT...GACTCCAAAGGTAGCTCCATATGACCACAAGACTGAAGAGGAGGTAGGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCATGGGTGCAATTGATAGGCTCCTaGGAAGATGTAGTAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NVVWNTMVVVRYAVSPWVQLIGS*EDVVVS Trigger: AGACACTACTACATCTTCCAAGGAGCCTATCAATTG...CACCCATGGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGCACATCACTCCAGACTaGGAAAGCTTTCTGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARHITPD*ESFLKY Trigger: ATATTTCAGAAAGCTTTCCAAGTCTGGAGTGATGTG...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | CAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCGAAGAGGTTTGTGCCTaGAAAACTTTTAGTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: QKQCCVEYYGGGKVCCKSEEVCA*KTFSPR Trigger: ACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTTC...GGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGGAAGAGGTTTGTGCCTaGAAAACTTTTAGTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEEEVCA*KTFSPR Trigger: ACGTGGACTAAAAGTTTTCAAGGCACAAACCTCTTC...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTCAATTGATAGGCTCCTaGGAAGATGTAGTAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCDLYTSPYFLLHYCHIVQLIGS*EDVVVS Trigger: AGACACTACTACATCTTCCAAGGAGCCTATCAATTG...AACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTGTTTATCCACAAAGAAATAAACCTTTTGGCGAAGTGGGTCAAAGACAGCGATAAAACACAAGCATaGCACACGGTTGTATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVFIHKEINLLAKWVKDSDKTQA*HTVVCS Trigger: GCTGCATACAACCGTGTGCAATGCTTGTGTTTTATC...GCTGTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTTGTGGATAAACACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTCACATCACTCCAGACTaGGAAAGCTTTCTGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: VCDLYTSPYFLLHYCHIVHITPD*ESFLKY Trigger: ATATTTCAGAAAGCTTTCCAAGTCTGGAGTGATGTG...AACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAAAAATGTGCATCTCCTaGAATACCAGGTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTKMCIS*NTRSRI Trigger: TATCCTGGACCTGGTATTCAAGGAGATGCACATTTT...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGGGTACATTATTGACTTaGGATTATTGGAATGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARGTLLT*DYWNAA Trigger: TGCAGCATTCCAATAATCCAAAGTCAATAATGTACC...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCGGTACATTATTGACTTaGGATTATTGGAATGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSGTLLT*DYWNAA Trigger: TGCAGCATTCCAATAATCCAAAGTCAATAATGTACC...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGATAAGACACTAAAACTCTTCCCAGCATGGTTGCAGTCTGTAGCTAGGAGGTGGGGTACATTATaGACTTTGGATTATTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: STDKTLKLFPAWLQSVARRWGTL*TLDYWN Trigger: ATTCCAATAATCCAAAGTCAATAATGTACCCCACCT...CCTAGCTACAGACTGCAACCATGCTGGGAAGAGTTTTAGTGTCTTATCTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS-3UTR CAA 90 bp | CAGAAGATAGGGAGCCAAGATGTCAGGACAGAAAATAAAACTGATAGAAGGCAGGGCTCTGGTACTAAGTaGTTTATTAACCAGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKIGSQDVRTENKTDRRQGSGTK*FINQYF Trigger: GAAGTACTGGTTAATAAACAACTTAGTACCAGAGCC...CTGCCTTCTATCAGTTTTATTTTCTGTCCTGACATCTTGGCTCCCTATCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS-3UTR CAA 90 bp | GTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCAACAACCAAACCAGCTaGTACTTTTCAATGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHLPLFPVTLLPHSYTLSNNQTS*YFSMFW Trigger: CCAAAACATTGAAAAGTACAAGCTGGTTTGGTTGTT...GCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGGGTACATTATTGACTTaGGATTATTGGAATGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLFPVTLLPHSYTLSIEGTLLT*DYWNAA Trigger: TGCAGCATTCCAATAATCCAAAGTCAATAATGTACC...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACACCCTGAGCATAGAGAGGTGGGGTACATTATaGACTTTGGATTATTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLFPVTLLPHSYTLSIERWGTL*TLDYWN Trigger: ATTCCAATAATCCAAAGTCAATAATGTACCCCACCT...CTCTATGCTCAGGGTGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAGGCTCTGGTACTAAGTaGTTTATTAACCAGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTGSGTK*FINQYF Trigger: GAAGTACTGGTTAATAAACAACTTAGTACCAGAGCC...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACCTGTACACCTCCCCTTATTTCCTGTTACATTATTGCCACATAGTTACAAAAGAAATAAACCTTTaGGCGAAGTGGGTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CDLYTSPYFLLHYCHIVTKEINL*AKWVKD Trigger: GTCTTTGACCCACTTCGCCAAAAGGTTTATTTCTTT...TGTAACTATGTGGCAATAATGTAACAGGAAATAAGGGGAGGTGTACAGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000120655.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAACAATGTTGTGTGGAATACTATGGTGGTGGTAAGGTATGCTGTAAGTCCAACAACCAAACCAGCTaGTACTTTTCAATGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKQCCVEYYGGGKVCCKSNNQTS*YFSMFW Trigger: CCAAAACATTGAAAAGTACAAGCTGGTTTGGTTGTT...GGACTTACAGCATACCTTACCACCACCATAGTATTCCACACAACATTGTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005950.12 |
||
| CDS TCA 90 bp | TGTTTTTGTCATTGGAATTCTGTCCTTTCCATAATCATAAAATCTTaGCAAGTACCATTCAGCAAATTCACTGTCATTCATGGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFCHWNSVLSIIIKS*QVPFSKFTVIHGSS Trigger: GCTGCTCCCATGAATGACAGTGAATTTGCTGAATGGTACTTGTCAAGATTTTATGATTATGGAAAGGACAGAATTCCAATGACAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000065079.6 |
||
| CDS CCA 72 bp | TCTGCTGGGAACCTTCAGCAAATTCACTGTCATTCATaGGAGCAGCCCCACAGGCAGATACCTGTAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SAGNLQQIHCHS*EQPHRQIPVRT Trigger: TGTTCTTACAGGTATCTGCCTGTGGGGCTGCTCCCATGAATGACAGTGAATTTGCTGAAGGTTCCCAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
||
| CDS CCA 72 bp | AGCTTAGCTGAAAATGTAGACAAGGAGGGTCATCTGTaGCTTTTGATTGGCAGGCAGCAAAGTATGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLAENVDKEGHL*LLIGRQQSMGC Trigger: ACAGCCCATACTTTGCTGCCTGCCAATCAAAAGCCACAGATGACCCTCCTTGTCTACATTTTCAGCTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065079.6 |
||
| CDS GCA 72 bp | CCACTAGATAAAACACAAGCATTGCACACGGTTGTATaGAGCCAGGTTTCTGCTGGGAACCTTCAGCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: PLDKTQALHTVV*SQVSAGNLQQI Trigger: AATTTGCTGAAGGTTCCCAGCAGAAACCTGGCTGCATACAACCGTGTGCAATGCTTGTGTTTTATCTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127722.2 |
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| CDS CAA 90 bp | TTGTTTTTGTCATTGGAATTCTGTCCTTTCCATAATCATAAAATCTaGACAAGTACCATTCAGCAAATTCACTGTCATTCATGGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LFLSLEFCPFHNHKI*TSTIQQIHCHSWEQ Trigger: CTGCTCCCATGAATGACAGTGAATTTGCTGAATGGTACTTGTCAAGATTTTATGATTATGGAAAGGACAGAATTCCAATGACAAAAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005950.12 ENSMUST00000065079.6 |
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