Pregenerated sensors for MMP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000901Ensembl transcript IDs: ENSMUST00000000924.13, ENSMUST00000120281.8, ENSMUST00000132869.2, ENSMUST00000152222.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTaGGTTCCAGGAAGCACTTGTCTGAATCACCTGCCAGAATATGAT | + |
|
Preference number: 1 (lower is better) Translates to: GRKQLPPWLAVYLLA*VPGSTCLNHLPEYD Trigger: ATCATATTCTGGCAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CCA 90 bp | CCACTCCCAACAGGAACCTCATTGCAGGTGATTCCTGAGTTTGTGTaGGGGTTCTACTTTGAGGGACAGAGATGGAGACCTTGGGCAACC | + |
|
Preference number: 1 (lower is better) Translates to: PLPTGTSLQVIPEFV*GFYFEGQRWRPWAT Trigger: GGTTGCCCAAGGTCTCCATCTCTGTCCCTCAAAGTAGAACCCCCACACAAACTCAGGAATCACCTGCAATGAGGTTCCTGTTGGGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CAA 90 bp | GGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTaGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GAFEVPCLWEEAAAS*AGCVPFGLSSRKHL Trigger: CAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| 3UTR CAA 90 bp | CAGAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTaGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QKEMAWGKAVRYVGP*RFRVSGRKQLPPWL Trigger: CAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGCAGGAAGCACTTGTCTaGATCACCCCTGAATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: VGPLRFRVSGRKQLPPWLQEALV*ITPECI Trigger: GATGCATTCAGGGGTGATTCAGACAAGTGCTTCCTG...CAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120281.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCACTTGTCTGAATCACCTGCCAGAATATGATCAGTTCACTATCTCTCCAGAGGTGGGGGTTCTACTTTaGGGGACAGAGATGGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: STCLNHLPEYDQFTISPEVGVLL*GTEMET Trigger: GGTCTCCATCTCTGTCCCTCAAAGTAGAACCCCCAC...CTCTGGAGAGATAGTGAACTGATCATATTCTGGCAGGTGATTCAGACAAGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTTATACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTAGGTGTGGGTCTCTTACATaGTCTAAGTGCCCTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLYTLYTHVHGLEGTCARCGSLT*SKCPGR Trigger: CCTGCCAGGGCACTTAGATCATGTAAGAGACCCACA...CCTAGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGTATAAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGTCTTTATACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTTGTCTGTCCCATGCCTaGAGCCCAGAGCCACAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KSLYTLYTHVHGLEGTCACLSHA*SPEPQI Trigger: TATCTGTGGCTCTGGGCTTCAGGCATGGGACAGACA...AGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGTATAAAGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGAAGCACTTGTCTGAATCACCTGCCAGAATATGATCAGTTCACTATCTCTATTCCTGAGTTTGTGTaGGGGTTCTACTTTGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PGSTCLNHLPEYDQFTISIPEFV*GFYFEG Trigger: TCCCTCAAAGTAGAACCCCCACACAAACTCAGGAAT...AGAGATAGTGAACTGATCATATTCTGGCAGGTGATTCAGACAAGTGCTTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CCA 72 bp | CCTGTGCTAGGAAGAGGGCCCCAGAAAGAAATGGCCTaGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVLGRGPQKEMA*GKAVRYVGPLR Trigger: CCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTCTGGGGCCCTCTTCCTAGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| 3UTR TCA 72 bp | TCCTACAAACAGTGGCTGCACCCCAACCCACTCCCCTaGGGAGACATAGGCCCTGTCTGTCCCATGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SYKQWLHPNPLP*GDIGPVCPMPE Trigger: TTCAGGCATGGGACAGACAGGGCCTATGTCTCCTCAGGGGAGTGGGTTGGGGTGCAGCCACTGTTTGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CCA 72 bp | TCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTaGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVSLGGSSCLLG*LCTFWPEFQEA Trigger: TGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| 3UTR TCA 72 bp | CAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTaGGTTCCAGGAAGCACTTGTCTGAATCACCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLPPWLAVYLLA*VPGSTCLNHLP Trigger: TGGCAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR GCA 72 bp | CCAGAGCTGACTTACCAGGAAAGATACTGGTCCAGTTaGTTAGCAGGGGCAGCATGGTACCCTGGGCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PELTYQERYWSS*LAGAAWYPGHL Trigger: GAGATGCCCAGGGTACCATGCTGCCCCTGCTAAGCAACTGGACCAGTATCTTTCCTGGTAAGTCAGCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CCA 72 bp | GAAAGATACTGGTCCAGTTGCTTAGCAGGGGCAGCATaGTACCCTGGGCATCTCATTACCAACACCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ERYWSSCLAGAA*YPGHLITNTTP Trigger: GGGAGTGGTGTTGGTAATGAGATGCCCAGGGTACCATGCTGCCCCTGCTAAGCAACTGGACCAGTATCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR TCA 72 bp | CAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTaGGTTCCAGGAAGCACTTGTCTGAATCACATGATC | + |
|
Preference number: 3 (lower is better) Translates to: QLPPWLAVYLLA*VPGSTCLNHMI Trigger: GATCATGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132869.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGAGTTCCAGGAAGCACTaGTCTGAATCACATGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: FRVSGRKQLPPWLAVYLLSSRKH*SESHDL Trigger: TAGATCATGTGATTCAGACAAGTGCTTCCTGGAACT...CAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132869.2 |
||
| 3UTR TCA 72 bp | TACCAACACCACTCCCAACAGGAACCTCATTGCAGGTaGTTCCTGAGTTTGTGTGGGGGTTCTACTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YQHHSQQEPHCR*FLSLCGGSTLR Trigger: CCTCAAAGTAGAACCCCCACACAAACTCAGGAATCACCTGCAATGAGGTTCCTGTTGGGAGTGGTGTTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR TCA 72 bp | TCCAGGAAGCACTTGTCTGAATCACCTGCCAGAATATaGTCAGTTCACTATCTCTCCAGAGCTGACTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKHLSESPARI*SVHYLSRADLP Trigger: TGGTAAGTCAGCTCTGGAGAGATAGTGAACTGATCATATTCTGGCAGGTGATTCAGACAAGTGCTTCCTGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR TCA 72 bp | TGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGTCTaGATCACCTGCCAGAATATGATCAGTTCACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: CTFWPEFQEALV*ITCQNMISSLS Trigger: AGATAGTGAACTGATCATATTCTGGCAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGCCCCTCGCCAGTCAGTaGAGCGCCGGGGCACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGPLRFRVSGRKQLPPWLPLASQ*SAGARD Trigger: ATCCCGTGCCCCGGCGCTCCACTGACTGGCGAGGGG...CAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTCCCCTCGCCAGTCAGTaGAGCGCCGGGGCACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSLGGSSCLLGWLCTFPLASQ*SAGARD Trigger: ATCCCGTGCCCCGGCGCTCCACTGACTGGCGAGGGG...AAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTCTGGGAGCTCAAAGTTaGGGCGGGGGAGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWEEAAASLAGCVPFGLSLGAQS*GGGGGG Trigger: GCCCCCACCTCCCCCGCCCCAACTTTGAGCTCCCAG...ACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGAGGCATGGGCCAGGATaGCCCCAGGCCCGTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSCLLGWLCTFWPEFQRHGPG*PQARQT Trigger: CGTTTGACGGGCCTGGGGGCATCCTGGCCCATGCCT...CTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAACTGGGAGCTCAAAGTTaGGGCGGGGGAGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSCLLGWLCTFWPEFQELGAQS*GGGGGG Trigger: GCCCCCACCTCCCCCGCCCCAACTTTGAGCTCCCAG...TTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCCTCTGCCACTGTCTaGCGGACTTGCTCCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VGPLRFRVSGRKQLPPWLASATV*RTCSLT Trigger: TGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGC...CAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | CGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCGGCAGTCCTTGCCAGTaGCGAGAGGCCAAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSGRKQLPPWLAVYLLAGSPCQ*REAKAG Trigger: TCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCC...GGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGCTGCATCCACAGGGCTaGGCAGTCCTTGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEAAASLAGCVPFGLSSRLHPQG*AVLASA Trigger: GGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAG...CCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| 3UTR CAA 72 bp | ATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTaGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MAWGKAVRYVGP*RFRVSGRKQLP Trigger: AGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTGGCGAAGTCGATCATaGTGTCAGCGCGTCCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPCLWEEAAASLAGCVPWRSRS*CQRVPR Trigger: ACGAGGGACGCGCTGACATCATGATCGACTTCGCCA...AGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGGTATGTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTTACCTGGAGGGCCTCTaGCACTGTCTGCCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRYVGPLRFRVSGRKQLPYLEGL*HCLPDL Trigger: CAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTA...AGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCACATACCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGTACCTGGAGGGCCTCTaGCACTGTCTGCCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSCLLGWLCTFWPEFQYLEGL*HCLPDL Trigger: CAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTA...CTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGCTTGCAGGCCCAGCTTaGAGAGTGGTGCAGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSCLLGWLCTFWPEFQLAGPA*RVVQGL Trigger: TAGGCCCTGCACCACTCTCCAAGCTGGGCCTGCAAG...CTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| 3UTR CAA 72 bp | GAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTaGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVPCLWEEAAAS*AGCVPFGLSSR Trigger: CCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000132869.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGCCTCTGCCACTGTCTaGCGGACTTGCTCCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLGGSSCLLGWLCTFWPASATV*RTCSLT Trigger: TGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGC...AGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGGGCAGTCCTTGCCAGTaGCGAGAGGCCAAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AASLAGCVPFGLSSRKHLGSPCQ*REAKAG Trigger: TCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCC...CAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACGGCATCCTCAAAAGCTaGATCCACAGGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRFRVSGRKQLPPWLAVYGILKS*IHRAGQ Trigger: CTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCC...GTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTGGCATCCTCAAAAGCTaGATCCACAGGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWEEAAASLAGCVPFGLSGILKS*IHRAGQ Trigger: CTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCC...ACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGGTATGTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTGCTCTCCTCGGATGGTaGAAACCGCGTCGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRYVGPLRFRVSGRKQLPALLGW*KPRRRK Trigger: CTTCCTTCGACGCGGTTTCCACCATCCGAGGAGAGC...AGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCACATACCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGGGATTGTCCACTCGCTaGGTTCTGGGGTGGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGGSSCLLGWLCTFWPEGLSTR*VLGWKR Trigger: GCGTTTCCACCCCAGAACCCAGCGAGTGGACAATCC...CTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGCATGGTCGTTCCTACAAACAGTGGCTGCACCCCAACCCACTCCCCTGAGACATGGCCAAATTCATaGGCCGCCACTTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSMVVPTNSGCTPTHSPETWPNS*AATCSR Trigger: CCTGCTGCAAGTGGCGGCTCATGAATTTGGCCATGT...CTCAGGGGAGTGGGTTGGGGTGCAGCCACTGTTTGTAGGAACGACCATGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR CCA 90 bp | TATGTGGGGCCTTTGAGGTTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGACTTCACTCCATACCTaGAGGGCCTCTGCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YVGPLRFRVSGRKQLPPWTSLHT*RASATV Trigger: GACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGT...CCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAACCTCAAAGGCCCCACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGTCTGAATCACCCCTGCATCCACAGGGCTaGGCAGTCCTTGCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCVPFGLSSRKHLSESPLHPQG*AVLASA Trigger: GGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAG...GGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120281.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGGAGGATCCTATAGGTaGGGTCTGTCTTCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSGRKQLPPWLAVYLLGGSYR*GLSSPS Trigger: GCTGGGAGAAGACAGACCTCACCTATAGGATCCTCC...CAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGGTTCCGTTGGCGAAGTCGATCATaGTGTCAGCGCGTCCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KEMAWGKAVRYVGPLRFRWRSRS*CQRVPR Trigger: ACGAGGGACGCGCTGACATCATGATCGACTTCGCCA...ACGGAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGCAGTGCAATCTCATTaGTATCTGTCCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSCLLGWLCTFWPEFQAVQSH*YLSQPG Trigger: CCCAGGCTGGGACAGATACCAATGAGATTGCACTGC...CTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAACCACTCGCTGGGTTCTaGGGTGGAAACGCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSCLLGWLCTFWPEFQEPLAGF*GGNANS Trigger: ACTATTGGCGTTTCCACCCCAGAACCCAGCGAGTGG...TTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | TTCCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGCCACTCGCTGGGTTCTaGGGTGGAAACGCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRVSGRKQLPPWLAVYLLPLAGF*GGNANS Trigger: ACTATTGGCGTTTCCACCCCAGAACCCAGCGAGTGG...CAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGTCGGATTGTCCACTCGCTaGGTTCTGGGGTGGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLGWLCTFWPEFQEALVGLSTR*VLGWKR Trigger: GCGTTTCCACCCCAGAACCCAGCGAGTGGACAATCC...GACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGGTTCACTTCACTCCATACCTaGAGGGCCTCTGCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKEMAWGKAVRYVGPLRFTSLHT*RASATV Trigger: GACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGT...GAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGAGCAGGTCAGTTCCCTaGTTGTCCCCAATAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSCLLGWLCTFWPEFQSRSVP*LSPIVQ Trigger: TTGGACTATTGGGGACAACCAGGGAACTGACCTGCT...CTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACAACCAAATCTGGCCCTaGGCATCCTCAAAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAASLAGCVPFGLSSRKHNQIWP*ASSKAA Trigger: TGCAGCTTTTGAGGATGCCCAGGGCCAGATTTGGTT...GTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCCTAGTCTGAGACAATTGTTGGCAGGTGACCATGACCAGCATGGTCGTCTTGCAGGCCCAGCTTaGAGAGTGGTGCAGGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLPSLRQLLAGDHDQHGRLAGPA*RVVQGL Trigger: TAGGCCCTGCACCACTCTCCAAGCTGGGCCTGCAAG...ACGACCATGCTGGTCATGGTCACCTGCCAACAATTGTCTCAGACTAGGCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCTCTTACATGATCTAAGTGCCCTGGCAGGAGTCAGTACCCCTGAATGCGGAGGATCCTATAGGTaGGGTCTGTCTTCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGLLHDLSALAGVSTPECGGSYR*GLSSPS Trigger: GCTGGGAGAAGACAGACCTCACCTATAGGATCCTCC...GCATTCAGGGGTACTGACTCCTGCCAGGGCACTTAGATCATGTAAGAGACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGGTTCCGAACCAAATCTGGCCCTaGGCATCCTCAAAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNGLGQGCEVCGAFEVPNQIWP*ASSKAA Trigger: TGCAGCTTTTGAGGATGCCCAGGGCCAGATTTGGTT...CGGAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGGGCCCCAGAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGTGGAAGAACCAAATCTaGCCCTGGGCATCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKRAPERNGLGQGCEVCGWKNQI*PWASSK Trigger: TTTTGAGGATGCCCAGGGCCAGATTTGGTTCTTCCA...CCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTCTGGGGCCCTCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGCCACAGATATGGCTGTGGGTCTCTTACATGATCTAAGTGCCCTGGCAACATCCCCTTCTCGGTaGGTCTTAGGGAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRATDMAVGLLHDLSALATSPSR*VLGKKA Trigger: TGCCTTCTTCCCTAAGACCCACCGAGAAGGGGATGT...TGCCAGGGCACTTAGATCATGTAAGAGACCCACAGCCATATCTGTGGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGTCTGAAGCAGTGCAATCTCATTaGTATCTGTCCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAGCVPFGLSSRKHLSEAVQSH*YLSQPG Trigger: CCCAGGCTGGGACAGATACCAATGAGATTGCACTGC...TTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| 3UTR CAA 72 bp | GGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTaGTCTGAATCACATGATCTAAGTGCCCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVPFGLSSRKH*SESHDLSALAG Trigger: TCCTGCCAGGGCACTTAGATCATGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132869.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTTGTCTGAATCAACACAAAGCCTGCCTTaGAGAAGAAGAGCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCVPFGLSSRKHLSESTQSLP*RRRALL Trigger: GAGGAGAGCTCTTCTTCTTCAAGGCAGGCTTTGTGT...TGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| 3UTR CAA 72 bp | GTAACACCAAAGCCTTTGCCTAGTCTGAGACAATTGTaGGCAGGTGACCATGACCAGCATGGTCGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VTPKPLPSLRQL*AGDHDQHGRSY Trigger: GTAGGAACGACCATGCTGGTCATGGTCACCTGCCAACAATTGTCTCAGACTAGGCAAAGGCTTTGGTGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CAA 72 bp | ATGGAGACCTTGGGCAACCAGGCTGACTGTGGATTATaGGTAGCTGAAATATTGCCAGCCCAAAACCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: METLGNQADCGL*VAEILPAQNLP Trigger: AGGGAGGTTTTGGGCTGGCAATATTTCAGCTACCAATAATCCACAGTCAGCCTGGTTGCCCAAGGTCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| 3UTR CAA 72 bp | GGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTaGTCTGAATCACCCCTGAATGCATCCAAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCVPFGLSSRKH*SESPLNASKVL Trigger: CAACACTTTGGATGCATTCAGGGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTAGGAAGAGGGCCTGGAAGAACCAAATCTaGCCCTGGGCATCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLYTHVHGLEGTCARKRAWKNQI*PWASSK Trigger: TTTTGAGGATGCCCAGGGCCAGATTTGGTTCTTCCA...GGCCCTCTTCCTAGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTTTATACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTGCTCTCCTCGGATGGTaGAAACCGCGTCGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLYTLYTHVHGLEGTCAALLGW*KPRRRK Trigger: CTTCCTTCGACGCGGTTTCCACCATCCGAGGAGAGC...AGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGTATAAAGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTTTATACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTACATCCCCTTCTCGGTaGGTCTTAGGGAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLYTLYTHVHGLEGTCATSPSR*VLGKKA Trigger: TGCCTTCTTCCCTAAGACCCACCGAGAAGGGGATGT...AGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGTATAAAGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCTTTATACACTGTATACACATGTACATGGCTTAGAGGGTACCTGTGCTACACAAAGCCTGCCTTaGAGAAGAAGAGCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLYTLYTHVHGLEGTCATQSLP*RRRALL Trigger: GAGGAGAGCTCTTCTTCTTCAAGGCAGGCTTTGTGT...AGCACAGGTACCCTCTAAGCCATGTACATGTGTATACAGTGTATAAAGACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | GAGCCGAGGCCCTTTCTTCACAGGGTGATGACGGTGACTCTCCGGTaGCCTGGCCCGGGCCATCAGCGGCGACGGCAGGAGCAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EPRPFLHRVMTVTLR*PGPGHQRRRQEQQQ Trigger: TTGCTGCTGCTCCTGCCGTCGCCGCTGATGGCCCGGGCCAGGCCACCGGAGAGTCACCGTCATCACCCTGTGAAGAAAGGGCCTCGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 90 bp | GGCAGTCCTTGCCAGTGCCGAGAGGCCAAAGCAGGATACCCGGGCTaGAGTCGCCCACTGCGCAGCCTCCACACAAAGCCTGCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPCQCREAKAGYPG*SRPLRSLHTKPALK Trigger: CTTCAAGGCAGGCTTTGTGTGGAGGCTGCGCAGTGGGCGACTGCAGCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 90 bp | CCCTGGGCATCCTCAAAAGCTGCATCCACAGGGCTGGGCAGTCCTTaGCAGTGCCGAGAGGCCAAAGCAGGATACCCGGGCTGCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PWASSKAASTGLGSP*QCREAKAGYPGCSR Trigger: GCGACTGCAGCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 90 bp | GCATCCTCAAAAGCTGCATCCACAGGGCTGGGCAGTCCTTGCCAGTaGCGAGAGGCCAAAGCAGGATACCCGGGCTGCAGTCGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSKAASTGLGSPCQ*REAKAGYPGCSRPL Trigger: CAGTGGGCGACTGCAGCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTCCTTGCAGGCCCAGCTaGGAGAGTGGTGCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWEEAAASLAGCVPFGLSPCRPS*ESGAGP Trigger: AGGCCCTGCACCACTCTCCAAGCTGGGCCTGCAAGG...ACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 90 bp | ATACCCGGGCTGCAGTCGCCCACTGCGCAGCCTCCACACAAAGCCTaGCTTGAAGAAGAAGAGCTCTCCTCGGATGGTGGAAACCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPGLQSPTAQPPHKA*LEEEELSSDGGNRV Trigger: GACGCGGTTTCCACCATCCGAGGAGAGCTCTTCTTCTTCAAGGCAGGCTTTGTGTGGAGGCTGCGCAGTGGGCGACTGCAGCCCGGGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | ACCAAATCTGGCCCTGGGCATCCTCAAAAGCTGCATCCACAGGGCTaGGCAGTCCTTGCCAGTGCCGAGAGGCCAAAGCAGGATACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TKSGPGHPQKLHPQG*AVLASAERPKQDTR Trigger: CCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCCCAGGGCCAGATTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 90 bp | AGTGGGGTCACTTCACTCCATACCTGGAGGGCCTCTGCCACTGTCTaGCGGACTTGCTCCCTTACAAGCTGCCATGGGAACCGGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SGVTSLHTWRASATV*RTCSLTSCHGNRRI Trigger: GATCCTCCGGTTCCCATGGCAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | CCCAGACCAAGGCGGCATGAACTGGGGACCCTTGCAGGCCCAGCTTaGAGAGTGGTGCAGGGCCTAGGACTGGCTTCTCACCATCATATA | + |
|
Preference number: 5 (lower is better) Translates to: PRPRRHELGTLAGPA*RVVQGLGLASHHHI Trigger: TATATGATGGTGAGAAGCCAGTCCTAGGCCCTGCACCACTCTCCAAGCTGGGCCTGCAAGGGTCCCCAGTTCATGCCGCCTTGGTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000152222.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTATGAACTGGGGACCCTaGCAGGCCCAGCTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWEEAAASLAGCVPFGLSMNWGP*QAQLGE Trigger: CTCTCCAAGCTGGGCCTGCAAGGGTCCCCAGTTCAT...ACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACATGAACTGGGGACCCTaGCAGGCCCAGCTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAASLAGCVPFGLSSRKHMNWGP*QAQLGE Trigger: CTCTCCAAGCTGGGCCTGCAAGGGTCCCCAGTTCAT...GTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | AGTCAGTGGAGCGCCGGGGCACGGGATTGTCCACTCGCTGGGTTCTaGGGTGGAAACGCCAATAGTCTCCACCTCGGAAGAAGTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SQWSAGARDCPLAGF*GGNANSLHLGRSRS Trigger: AGATCTACTTCTTCCGAGGTGGAGACTATTGGCGTTTCCACCCCAGAACCCAGCGAGTGGACAATCCCGTGCCCCGGCGCTCCACTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000152222.3 |
||
| CDS-3UTR CAA 90 bp | CCGTGTCTCTGGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCCGTCAAACGGCAAGTaGTCACCATGCCAGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCLWEEAAASLAGCVPFGPSNGK*SPCQYL Trigger: CAGGTACTGGCATGGTGACAACTTGCCGTTTGACGG...GCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCCAGAGACACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | TCGTGCACCTCAGTGAAAGTGAGTGGGGTCACTTCACTCCATACCTaGAGGGCCTCTGCCACTGTCTGCCGGACTTGCTCCCTTACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCTSVKVSGVTSLHT*RASATVCRTCSLTS Trigger: GCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTCACTTTCACTGAGGTGCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 90 bp | GATCATGATGTCAGCGCGTCCCTCGTGCACCTCAGTGAAAGTGAGTaGGGTCACTTCACTCCATACCTGGAGGGCCTCTGCCACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DHDVSASLVHLSESE*GHFTPYLEGLCHCL Trigger: CAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTCACTTTCACTGAGGTGCACGAGGGACGCGCTGACATCATGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTGCCTAGTCTGAGACAATTGTTGGCAGGTGACCATGACCAGCATGGTCGTCCTTGCAGGCCCAGCTaGGAGAGTGGTGCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLPSLRQLLAGDHDQHGRPCRPS*ESGAGP Trigger: AGGCCCTGCACCACTCTCCAAGCTGGGCCTGCAAGG...ACGACCATGCTGGTCATGGTCACCTGCCAACAATTGTCTCAGACTAGGCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS GCA 90 bp | AGTGAAAGTGAGTGGGGTCACTTCACTCCATACCTGGAGGGCCTCTaGCACTGTCTGCCGGACTTGCTCCCTTACAAGCTGCCATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SESEWGHFTPYLEGL*HCLPDLLPYKLPWE Trigger: TTCCCATGGCAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTCACTTTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAGCAGTGCAATCTCATaGGTATCTGTCCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEAAASLAGCVPFGLSSRSSAIS*VSVPAW Trigger: CCAGGCTGGGACAGATACCAATGAGATTGCACTGCT...CCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACCCAGTACTGAGCACCTaGGAAGAACCAAATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAASLAGCVPFGLSSRKHPVLST*EEPNLA Trigger: GGCCAGATTTGGTTCTTCCAAGGTGCTCAGTACTGG...GTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 90 bp | GGGAGGAAGCAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTaGGTTCCAGGAAGCACTTGTCTGAATCACCTTCACGGGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRKQLPPWLAVYLLA*VPGSTCLNHLHGIK Trigger: TTTGATCCCGTGAAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTGCTTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152222.3 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGGTTCAGCAGTGCAATCTCATaGGTATCTGTCCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKEMAWGKAVRYVGPLRFSSAIS*VSVPAW Trigger: CCAGGCTGGGACAGATACCAATGAGATTGCACTGCT...GAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAAATGGCCTGGGGCAAGGCTGTGAGGTATGTGGGGCCTTTGAGGTTCCGCACACAAAGCCTGCCTaGAAGAAGAAGAGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ERNGLGQGCEVCGAFEVPHTKPA*KKKSSP Trigger: AGGAGAGCTCTTCTTCTTCAAGGCAGGCTTTGTGTG...CGGAACCTCAAAGGCCCCACATACCTCACAGCCTTGCCCCAGGCCATTTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 90 bp | TTAGCTGCTGTGGTGTGTTGTAGCCCCAGAACATGGCCAAATTCATaGGCCGCCACTTGCAGCAGGTCAGTTCCCTGGTTGTCCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LAAVVCCSPRTWPNS*AATCSRSVPWLSPI Trigger: TATTGGGGACAACCAGGGAACTGACCTGCTGCAAGTGGCGGCTCATGAATTTGGCCATGTTCTGGGGCTACAACACACCACAGCAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 90 bp | GGTGCAGGGCCTAGGACTGGCTTCTCACCATCATATACCCAGTACTaGGCACCTTGGAAGAACCAAATCTGGCCCTGGGCATCCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGPRTGFSPSYTQY*APWKNQIWPWASSK Trigger: TTTTGAGGATGCCCAGGGCCAGATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTATATGATGGTGAGAAGCCAGTCCTAGGCCCTGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCTCTTACATGATCTAAGTGCCCTGGCAGGAGTCAGTACCCCTGAATGCCCAGTACTGAGCACCTaGGAAGAACCAAATCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLLHDLSALAGVSTPECPVLST*EEPNLA Trigger: GGCCAGATTTGGTTCTTCCAAGGTGCTCAGTACTGG...GCATTCAGGGGTACTGACTCCTGCCAGGGCACTTAGATCATGTAAGAGACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGCACTTGTCTGAATCACCTGCCAGAATATGATCAGTTCACTATCTCTCCGTCAAACGGCAAGTaGTCACCATGCCAGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGSTCLNHLPEYDQFTISPSNGK*SPCQYL Trigger: CAGGTACTGGCATGGTGACAACTTGCCGTTTGACGG...AGAGATAGTGAACTGATCATATTCTGGCAGGTGATTCAGACAAGTGCTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000924.13 |
||
| CDS GCA 72 bp | TGCCAGTGCCGAGAGGCCAAAGCAGGATACCCGGGCTaGAGTCGCCCACTGCGCAGCCTCCACACAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CQCREAKAGYPG*SRPLRSLHTKP Trigger: AGGCTTTGTGTGGAGGCTGCGCAGTGGGCGACTGCAGCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CAA 90 bp | GCCCTGGGCATCCTCAAAAGCTGCATCCACAGGGCTGGGCAGTCCTaGCCAGTGCCGAGAGGCCAAAGCAGGATACCCGGGCTGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALGILKSCIHRAGQS*PVPRGQSRIPGLQS Trigger: CGACTGCAGCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCCCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | GGCCCTGGGCATCCTCAAAAGCTGCATCCACAGGGCTaGGCAGTCCTTGCCAGTGCCGAGAGGCCAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGHPQKLHPQG*AVLASAERPKQ Trigger: CTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGATGCCCAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | CAGCATCAATCTCAGAAGGTACCCCTCGCCAGTCAGTaGAGCGCCGGGGCACGGGATTGTCCACTCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QHQSQKVPLASQ*SAGARDCPLAG Trigger: CCCAGCGAGTGGACAATCCCGTGCCCCGGCGCTCCACTGACTGGCGAGGGGTACCTTCTGAGATTGATGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000152222.3 |
||
| CDS CAA 90 bp | CCGGGCTGCAGTCGCCCACTGCGCAGCCTCCACACAAAGCCTGCCTaGAAGAAGAAGAGCTCTCCTCGGATGGTGGAAACCGCGTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGCSRPLRSLHTKPA*KKKSSPRMVETASK Trigger: CTTCGACGCGGTTTCCACCATCCGAGGAGAGCTCTTCTTCTTCAAGGCAGGCTTTGTGTGGAGGCTGCGCAGTGGGCGACTGCAGCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 72 bp | TCCTCAAAAGCTGCATCCACAGGGCTGGGCAGTCCTTaGCAGTGCCGAGAGGCCAAAGCAGGATACCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSKAASTGLGSP*QCREAKAGYPG Trigger: GCCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | AGCGCCGGGGCACGGGATTGTCCACTCGCTGGGTTCTaGGGTGGAAACGCCAATAGTCTCCACCTCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGARDCPLAGF*GGNANSLHLGR Trigger: TCTTCCGAGGTGGAGACTATTGGCGTTTCCACCCCAGAACCCAGCGAGTGGACAATCCCGTGCCCCGGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000152222.3 |
||
| CDS CCA 72 bp | GTCAGCGCGTCCCTCGTGCACCTCAGTGAAAGTGAGTaGGGTCACTTCACTCCATACCTGGAGGGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSASLVHLSESE*GHFTPYLEGLC Trigger: GCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTCACTTTCACTGAGGTGCACGAGGGACGCGCTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CAA 72 bp | ATCCTCAAAAGCTGCATCCACAGGGCTGGGCAGTCCTaGCCAGTGCCGAGAGGCCAAAGCAGGATACCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILKSCIHRAGQS*PVPRGQSRIPG Trigger: CCCGGGTATCCTGCTTTGGCCTCTCGGCACTGGCAAGGACTGCCCAGCCCTGTGGATGCAGCTTTTGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 72 bp | GAGTGGGGTCACTTCACTCCATACCTGGAGGGCCTCTaGCACTGTCTGCCGGACTTGCTCCCTTACAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EWGHFTPYLEGL*HCLPDLLPYKL Trigger: CAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | CTGGCGGGGTTTCCGGCTCCAGCAGTGCAATCTCATTaGTATCTGTCCCAGCCTGGGAGCTCAAAGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGFPAPAVQSH*YLSQPGSSKLG Trigger: CCCCAACTTTGAGCTCCCAGGCTGGGACAGATACCAATGAGATTGCACTGCTGGAGCCGGAAACCCCGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CAA 90 bp | CACTTCACTCCATACCTGGAGGGCCTCTGCCACTGTCTGCCGGACTaGCTCCCTTACAAGCTGCCATGGGAACCGGAGGATCCTATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HFTPYLEGLCHCLPD*LPYKLPWEPEDPIG Trigger: ACCTATAGGATCCTCCGGTTCCCATGGCAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 72 bp | ATCTTGTTCTTCTCAGGACCCCAGACCAAGGCGGCATaGACTGGGGACCCTTGCAGGCCCAGCTTGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ILFFSGPQTKAA*TGDPCRPSLES Trigger: ACTCTCCAAGCTGGGCCTGCAAGGGTCCCCAGTTCATGCCGCCTTGGTCTGGGGTCCTGAGAAGAACAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 ENSMUST00000152222.3 |
||
| CDS GCA 72 bp | ACTTCACTCCATACCTGGAGGGCCTCTGCCACTGTCTaGCGGACTTGCTCCCTTACAAGCTGCCATGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSLHTWRASATV*RTCSLTSCHGN Trigger: GTTCCCATGGCAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS GCA 72 bp | CTCACAGACATCTGGCGGGGTTTCCGGCTCCAGCAGTaGAATCTCATTGGTATCTGTCCCAGCCTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTDIWRGFRLQQ*NLIGICPSLGA Trigger: AGCTCCCAGGCTGGGACAGATACCAATGAGATTGCACTGCTGGAGCCGGAAACCCCGCCAGATGTCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | TCAGTGAAAGTGAGTGGGGTCACTTCACTCCATACCTaGAGGGCCTCTGCCACTGTCTGCCGGACTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVKVSGVTSLHT*RASATVCRTCS Trigger: GGAGCAAGTCCGGCAGACAGTGGCAGAGGCCCTCCAGGTATGGAGTGAAGTGACCCCACTCACTTTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CAA 72 bp | TCTGGCGGGGTTTCCGGCTCCAGCAGTGCAATCTCATaGGTATCTGTCCCAGCCTGGGAGCTCAAAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGVSGSSSAIS*VSVPAWELKVG Trigger: CCCAACTTTGAGCTCCCAGGCTGGGACAGATACCAATGAGATTGCACTGCTGGAGCCGGAAACCCCGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 72 bp | GTGGTGTGTTGTAGCCCCAGAACATGGCCAAATTCATaGGCCGCCACTTGCAGCAGGTCAGTTCCCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVCCSPRTWPNS*AATCSRSVPWL Trigger: CAACCAGGGAACTGACCTGCTGCAAGTGGCGGCTCATGAATTTGGCCATGTTCTGGGGCTACAACACACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CCA 72 bp | CACTGTCTGCCGGACTTGCTCCCTTACAAGCTGCCATaGGAACCGGAGGATCCTATAGGTGAGGTCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCLPDLLPYKLP*EPEDPIGEVCL Trigger: AAGACAGACCTCACCTATAGGATCCTCCGGTTCCCATGGCAGCTTGTAAGGGAGCAAGTCCGGCAGACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS TCA 72 bp | CAGCTGCCTCCTTGGCTGGCTGTGTACCTTTTGGCCTaGGTTCCAGGAAGCACTTGTCTGAATCACCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLPPWLAVYLLA*VPGSTCLNHLH Trigger: GTGAAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGAGGCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152222.3 |
||
| CDS TCA 72 bp | CCTAGGACTGGCTTCTCACCATCATATACCCAGTACTaGGCACCTTGGAAGAACCAAATCTGGCCCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRTGFSPSYTQY*APWKNQIWPWA Trigger: TGCCCAGGGCCAGATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTATATGATGGTGAGAAGCCAGTCCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||
| CDS CAA 90 bp | TCCTTGGCTGGCTGTGTACCTTTTGGCCTGAGTTCCAGGAAGCACTaGTCTGAATCACCTTCACGGGATCAAACTTCCAGTAGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLAGCVPFGLSSRKH*SESPSRDQTSSRDG Trigger: GCCATCTCTACTGGAAGTTTGATCCCGTGAAGGTGATTCAGACAAGTGCTTCCTGGAACTCAGGCCAAAAGGTACACAGCCAGCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152222.3 |
||
| CDS CAA 72 bp | TGGCTTCTCACCATCATATACCCAGTACTGAGCACCTaGGAAGAACCAAATCTGGCCCTGGGCATCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WLLTIIYPVLST*EEPNLALGILK Trigger: TTTGAGGATGCCCAGGGCCAGATTTGGTTCTTCCAAGGTGCTCAGTACTGGGTATATGATGGTGAGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000924.13 ENSMUST00000120281.8 |
||