Pregenerated sensors for MMGT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048497Ensembl transcript IDs: ENSMUST00000129162.3, ENSMUST00000155759.3
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGGGCAAGGCTCTTCCACCTCTTATGTGCACTATTCTGGGAATaGTGGCCTTTCTCTACTTCAGTTAGGCCTCTTCACCCAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: EGARLFHLLCALFWE*WPFSTSVRPLHPAW Trigger: CCATGCTGGGTGAAGAGGCCTAACTGAAGTAGAGAAAGGCCAGCATTCCCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTGCCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR CCA 90 bp | GGGGCAAGGCTCTTCCACCTCTTATGTGCACTATTCTGGGAATGCTaGCCTTTCTCTACTTCAGTTAGGCCTCTTCACCCAGCATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: GARLFHLLCALFWEC*PFSTSVRPLHPAWK Trigger: TTTCCATGCTGGGTGAAGAGGCCTAACTGAAGTAGAGAAAGGCCAGCATTCCCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR CCA 90 bp | AGCTTGGAAGGGGCAAGGCTCTTCCACCTCTTATGTGCACTATTCTaGGAATGCTGGCCTTTCTCTACTTCAGTTAGGCCTCTTCACCCA | + |
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Preference number: 1 (lower is better) Translates to: SLEGARLFHLLCALF*ECWPFSTSVRPLHP Trigger: TGGGTGAAGAGGCCTAACTGAAGTAGAGAAAGGCCAGCATTCCCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTGCCCCTTCCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR GCA 90 bp | TCAGACATTGTGAAAACCTTCCAGTTCCTTCAAGACTGTAATCAGTaGACAGACTCAGGAGAGCCCACATGCAAGTTTAGTCTCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: SDIVKTFQFLQDCNQ*TDSGEPTCKFSLTG Trigger: GCCTGTGAGACTAAACTTGCATGTGGGCTCTCCTGAGTCTGTGCACTGATTACAGTCTTGAAGGAACTGGAAGGTTTTCACAATGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR CAA 90 bp | GCCCACAGCAAGCAGCACGTGGAACTGGCGACAGGGGTAGCTAGCTaGGAAGGGGCAAGGCTCTTCCACCTCTTATGTGCACTATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: AHSKQHVELATGVAS*EGARLFHLLCALFW Trigger: CCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTGCCCCTTCCAAGCTAGCTACCCCTGTCGCCAGTTCCACGTGCTGCTTGCTGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTCCTGTACATGGCGACAGAGTCAATCCCCTGCAGACACCAGGGGACAGTCCAGATCATCAGTCTaGGAGCCCAGGAGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: FGSCTWRQSQSPADTRGQSRSSV*EPRRNL Trigger: CAGGTTCCTCCTGGGCTCTCAGACTGATGATCTGGA...CTGTCCCCTGGTGTCTGCAGGGGATTGACTCTGTCGCCATGTACAGGAACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR GCA 90 bp | GATGACTGGAAGTATATGGGTGGGTGGGCAGAGGTTCTGTGGAAATACAATGTCTCGAAAGTTCAAGCATaGAAAAGCATGTCTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: DDWKYMGGWAEVLWKYNVSKVQA*KSMSSL Trigger: TAAGGAAGACATGCTTTTGCATGCTTGAACTTTCGA...GACATTGTATTTCCACAGAACCTCTGCCCACCCACCCATATACTTCCAGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR GCA 90 bp | CAAACCTTAATACATTTGCAAATGGCAAAATCTCGTATGGAACCGCAGCAAAAACAAGACTGTAATCAGTaGACAGACTCAGGAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QTLIHLQMAKSRMEPQQKQDCNQ*TDSGEP Trigger: GGGCTCTCCTGAGTCTGTGCACTGATTACAGTCTTG...TTTTTGCTGCGGTTCCATACGAGATTTTGCCATTTGCAAATGTATTAAGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR CCA 90 bp | TTAATACATTTGCAAATGGCAAAATCTCGTATGGAACCGCAGCAAAAAGAGAAGCCTCTTCACCCAGCATaGAAAATCATCGCCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: LIHLQMAKSRMEPQQKEKPLHPA*KIIAIS Trigger: GGAGATGGCGATGATTTTCCATGCTGGGTGAAGAGG...CTTCTCTTTTTGCTGCGGTTCCATACGAGATTTTGCCATTTGCAAATGTATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR CCA 90 bp | CACATGCTAGCATCTTCTTATCATTATTCCCTAAACAAAGCAGTACAGCAACTGAAAATACTGATGTGTTaGGGGTGTTTCACATCCCAA | + |
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Preference number: 2 (lower is better) Translates to: HMLASSYHYSLNKAVQQLKILMC*GCFTSQ Trigger: TTGGGATGTGAAACACCCCCAACACATCAGTATTTT...CAGTTGCTGTACTGCTTTGTTTAGGGAATAATGATAAGAAGATGCTAGCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCATCTTCTTATCATTATTCCCTAAACAAAGCAGTACAGCAACTGTTTACTTCTACAGCTGTGACTaGGTACCTGGCATAAATATC | + |
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Preference number: 2 (lower is better) Translates to: ASIFLSLFPKQSSTATVYFYSCD*VPGINI Trigger: GATATTTATGCCAGGTACCCAGTCACAGCTGTAGAA...GTAAACAGTTGCTGTACTGCTTTGTTTAGGGAATAATGATAAGAAGATGCTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR CAA 90 bp | GATGACTGGAAGTATATGGGTGGGTGGGCAGAGGTTCTGTGGAAATACAATGTCACAGGGGTAGCTAGCTaGGAAGGGGCAAGGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: DDWKYMGGWAEVLWKYNVTGVAS*EGARLF Trigger: GAAGAGCCTTGCCCCTTCCAAGCTAGCTACCCCTGT...GACATTGTATTTCCACAGAACCTCTGCCCACCCACCCATATACTTCCAGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR CCA 72 bp | GGGGCAAGGCTCTTCCACCTCTTATGTGCACTATTCTaGGAATGCTGGCCTTTCTCTACTTCAGTTAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GARLFHLLCALF*ECWPFSTSVRP Trigger: AGGCCTAACTGAAGTAGAGAAAGGCCAGCATTCCCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGGCTCTTCCACCTCTTATGTGCACTATTCTGGGAATGCTGGCCTTTCTCTAAAAAATACTGATGTGTaGGGGGTGTTTCACATCCCA | + |
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Preference number: 3 (lower is better) Translates to: QGSSTSYVHYSGNAGLSLKNTDV*GVFHIP Trigger: TGGGATGTGAAACACCCCCAACACATCAGTATTTTT...TAGAGAAAGGCCAGCATTCCCAGAATAGTGCACATAAGAGGTGGAAGAGCCTTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR GCA 72 bp | GTGAAAACCTTCCAGTTCCTTCAAGACTGTAATCAGTaGACAGACTCAGGAGAGCCCACATGCAAGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: VKTFQFLQDCNQ*TDSGEPTCKFS Trigger: ACTAAACTTGCATGTGGGCTCTCCTGAGTCTGTGCACTGATTACAGTCTTGAAGGAACTGGAAGGTTTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR TCA 72 bp | GGTGAGAGTCGGAATGAAGAATCAAATCAGACATTGTaGAAACCTTCCAGTTCCTTCAAGACTGTAATCAGT | + |
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Preference number: 3 (lower is better) Translates to: GESRNEESNQTL*KPSSSFKTVIS Trigger: ACTGATTACAGTCTTGAAGGAACTGGAAGGTTTTCACAATGTCTGATTTGATTCTTCATTCCGACTCTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR TCA 72 bp | AAAACAAATCCACAGTTAATCAGCGTTCTACAGCTGTaGCTGGGTACCTGGCATAAATATCTCTTATTTATT | + |
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Preference number: 3 (lower is better) Translates to: KTNPQLISVLQL*LGTWHKYLLFI Trigger: AATAAATAAGAGATATTTATGCCAGGTACCCAGTCACAGCTGTAGAACGCTGATTAACTGTGGATTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR TCA 72 bp | TATATAAACACATTCCCCTCCTTGATTCCAGTCCTCTaGCAAACCTTAATACATTTGCAAATGGCAAAATCT | + |
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Preference number: 3 (lower is better) Translates to: YINTFPSLIPVL*QTLIHLQMAKS Trigger: AGATTTTGCCATTTGCAAATGTATTAAGGTTTGTCAGAGGACTGGAATCAAGGAGGGGAATGTGTTTATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR TCA 72 bp | CTAACCAAATTTATTTGGGAGAAATTCCATCTGGACTaGACACATGCTAGCATCTTCTTATCATTATTCCCT | + |
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Preference number: 3 (lower is better) Translates to: LTKFIWEKFHLD*THASIFLSLFP Trigger: AGGGAATAATGATAAGAAGATGCTAGCATGTGTTCAGTCCAGATGGAATTTCTCCCAAATAAATTTGGTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| 3UTR CCA 72 bp | ATTAAGTCTGAAATATCAGTAAAAATACTGATGTGTTaGGGGTGTTTCACATCCCAAATCCCGGTACTTAAT | + |
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Preference number: 3 (lower is better) Translates to: IKSEISVKILMC*GCFTSQIPVLN Trigger: ATTAAGTACCGGGATTTGGGATGTGAAACACCCCCAACACATCAGTATTTTTACTGATATTTCAGACTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| CDS-3UTR TCA 90 bp | ACCTCACCCAAAAACAAATCCACAGTTAATCAGCGTTCTACAGCTGTGACTGGGAGAAGGCCGCGTGGGTaGGGGCGAAGAGACCGACGC | + |
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Preference number: 4 (lower is better) Translates to: TSPKNKSTVNQRSTAVTGRRPRG*GRRDRR Trigger: GCGTCGGTCTCTTCGCCCTCACCCACGCGGCCTTCT...CCCAGTCACAGCTGTAGAACGCTGATTAACTGTGGATTTGTTTTTGGGTGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| CDS-3UTR TCA 90 bp | ATCAAATCAGACATTGTGAAAACCTTCCAGTTCCTTCAAGACTGTAATCAGTGCGCGATGCTGAGCAGCTaGGAAGGCCGCGTGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: IKSDIVKTFQFLQDCNQCAMLSS*EGRVGE Trigger: CTCACCCACGCGGCCTTCTCAGCTGCTCAGCATCGC...GCACTGATTACAGTCTTGAAGGAACTGGAAGGTTTTCACAATGTCTGATTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| CDS-3UTR GCA 90 bp | CAGTACAGCAACTGTTTACACAGAATTCACATGGGATTAGGTGTTACATGTAACGTCTCTAAAGTCCCCTaGAGTATGAACCACGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: QYSNCLHRIHMGLGVTCNVSKVP*SMNHAV Trigger: TACGGCGTGGTTCATACTGCAGGGGACTTTAGAGAC...GTTACATGTAACACCTAATCCCATGTGAATTCTGTGTAAACAGTTGCTGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| CDS-3UTR CAA 90 bp | CAAACCTTAATACATTTGCAAATGGCAAAATCTCGTATGGAACCGCAGCAAAAAGGTTTGAAGAATGGGTaGAATCCGGACGCTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: QTLIHLQMAKSRMEPQQKGLKNG*NPDAGT Trigger: TGTTCCAGCGTCCGGATTCAACCCATTCTTCAAACC...TTTTTGCTGCGGTTCCATACGAGATTTTGCCATTTGCAAATGTATTAAGGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129162.3 |
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| CDS TCA 72 bp | TTCTGTCAGTCGCGCATGAGAGCGATGCTGAGCAGCTaGGAAGGCCGCGTGGGTGAGGGCGAAGAGACCGAC | + |
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Preference number: 6 (lower is better) Translates to: FCQSRMRAMLSS*EGRVGEGEETD Trigger: GTCGGTCTCTTCGCCCTCACCCACGCGGCCTTCTCAGCTGCTCAGCATCGCTCTCATGCGCGACTGACAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129162.3 ENSMUST00000155759.3 |
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