Pregenerated sensors for MMGT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061273Ensembl transcript IDs: ENSMUST00000059899.3
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCTGAGCTATTAGCCCATAGGATTTGGCTAGTTCCCTGGTTATaGAGTGTGTTCCTGCATTCTGGAGAACTTTGCTGGGTACATGTC | + |
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Preference number: 1 (lower is better) Translates to: AAELLAHRIWLVPWL*SVFLHSGELCWVHV Trigger: GACATGTACCCAGCAAAGTTCTCCAGAATGCAGGAACACACTTCATAACCAGGGAACTAGCCAAATCCTATGGGCTAATAGCTCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | AGAAGAAAACAAGAGGCTCTTCAGTCAAGTAATAGTCGAGGAGTATaGCAGAAAAGCCTGATGTACAGCATGCGTCCTGCACGCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: RRKQEALQSSNSRGV*QKSLMYSMRPARHF Trigger: AAAATGGCGTGCAGGACGCATGCTGTACATCAGGCTTTTCTGCCATACTCCTCGACTATTACTTGACTGAAGAGCCTCTTGTTTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | GCTTCCTACCAGATTTACAAACCCAGACACTTTCTGTCACTGTACTaGGTTCTGAGTTCTCAGAATGAGCATTTATCCCACGTAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: ASYQIYKPRHFLSLY*VLSSQNEHLSHVGN Trigger: GTTTCCTACGTGGGATAAATGCTCATTCTGAGAACTCAGAACCCAGTACAGTGACAGAAAGTGTCTGGGTTTGTAAATCTGGTAGGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | AGACAAGAAGACATTTTAATATCCATTGTAGAAACGAGAATGGGCTaGGCACTGATGGTGCACGCCTTTAATCCCAACACTTGGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RQEDILISIVETRMG*ALMVHAFNPNTWKA Trigger: TGCCTTCCAAGTGTTGGGATTAAAGGCGTGCACCATCAGTGCCCAGCCCATTCTCGTTTCTACAATGGATATTAAAATGTCTTCTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | GAAATCATGTCAGCTATAGGTTTACCTAGCACTAGCTCAGATCACTaGTTTTCAACTACCCTAGGCAGTAATGGACTATCACACAGTACT | + |
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Preference number: 1 (lower is better) Translates to: EIMSAIGLPSTSSDH*FSTTLGSNGLSHST Trigger: AGTACTGTGTGATAGTCCATTACTGCCTAGGGTAGTTGAAAACCAGTGATCTGAGCTAGTGCTAGGTAAACCTATAGCTGACATGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 90 bp | AAGATAAGGTCTCACTGTGTATCTAATTCTGGTCTTGAACCTGTGTaGAAACTTTCCTGCCTTAGCCTCCTGAGTGTTAGTATTATAGGC | + |
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Preference number: 1 (lower is better) Translates to: KIRSHCVSNSGLEPV*KLSCLSLLSVSIIG Trigger: GCCTATAATACTAACACTCAGGAGGCTAAGGCAGGAAAGTTTTCACACAGGTTCAAGACCAGAATTAGATACACAGTGAGACCTTATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | TGTTACAGGCATCAAGGCTCACAAACAACAGTATTCAATACATCATaGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTC | + |
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Preference number: 1 (lower is better) Translates to: CYRHQGSQTTVFNTS*KPVMYSQENAVMSL Trigger: GAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCATGATGTATTGAATACTGTTGTTTGTGAGCCTTGATGCCTGTAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 90 bp | GAGGTGACTACTAAAGAATACAGGGCTTCTTGGAGAGGAGTGAAATaGCCTAGATTTATCAAGTGGTTGCATAATTTTGTGAGTATATTT | + |
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Preference number: 1 (lower is better) Translates to: EVTTKEYRASWRGVK*PRFIKWLHNFVSIF Trigger: AAATATACTCACAAAATTATGCAACCACTTGATAAATCTAGGCCATTTCACTCCTCTCCAAGAAGCCCTGTATTCTTTAGTAGTCACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 90 bp | CTTAGTCGTATAGTACCATATTTCAAGAAGATAGCAGAAATTCAATaGAGTCGATTTAAAAACCTGGGGCTATTTACCTGGTCTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LSRIVPYFKKIAEIQ*SRFKNLGLFTWSEV Trigger: TACCTCAGACCAGGTAAATAGCCCCAGGTTTTTAAATCGACTTCATTGAATTTCTGCTATCTTCTTGAAATATGGTACTATACGACTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR GCA 90 bp | GTAATCAGCAGATTTCCAAGTTTGTTCTCATTAGAGAACAGTCAATaGTCCATAGACTTAGTTAGCAAAACAGAGCTCAAGAATCATAAT | + |
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Preference number: 1 (lower is better) Translates to: VISRFPSLFSLENSQ*SIDLVSKTELKNHN Trigger: ATTATGATTCTTGAGCTCTGTTTTGCTAACTAAGTCTATGGAGCATTGACTGTTCTCTAATGAGAACAAACTTGGAAATCTGCTGATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR GCA 90 bp | GCTAGGAGGAAAAGTACTCTATTTAATAAGATTAACTCTAGAGTCTaGCAGGTATCTGGCTTTCCCTCTTTAAATCCATTGATTTATCAA | + |
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Preference number: 1 (lower is better) Translates to: ARRKSTLFNKINSRV*QVSGFPSLNPLIYQ Trigger: TTGATAAATCAATGGATTTAAAGAGGGAAAGCCAGATACCTGGCAGACTCTAGAGTTAATCTTATTAAATAGAGTACTTTTCCTCCTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCTACACAGAGAAACCCTGTCTTGGCAAAACCAAAGCAGAGCTGGGAGGCAGACTTATAATGAGTaGGACTGGCTAATGACGATC | + |
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Preference number: 2 (lower is better) Translates to: PGLHRETLSWQNQSRAGRQTYNE*DWLMTI Trigger: GATCGTCATTAGCCAGTCTCACTCATTATAAGTCTG...CCTCCCAGCTCTGCTTTGGTTTTGCCAAGACAGGGTTTCTCTGTGTAGCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | TACGTGGGACAAACTGGGAGGAAATCAGAGGTGACTACTAAAGAATACAGGGCTGGTCTTGAACCTGTGTaGAAACTTTCCTGCCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: YVGQTGRKSEVTTKEYRAGLEPV*KLSCLS Trigger: GCTAAGGCAGGAAAGTTTTCACACAGGTTCAAGACC...AGCCCTGTATTCTTTAGTAGTCACCTCTGATTTCCTCCCAGTTTGTCCCACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCAGAATAGCCAGGGCTACACAGAGAAACCCTGTCTTGGCAAAACCAAAGCACTGTACTGGGTTCTaGGTTCTCAGAATGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: SSRIARATQRNPVLAKPKHCTGF*VLRMSI Trigger: AATGCTCATTCTGAGAACTCAGAACCCAGTACAGTG...CTTTGGTTTTGCCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTATTCTGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGAGCTGGTATAGTGCTTaGCTAGCATGCATGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: WKPVMYSQENAVMSLKSMSWYSA*LACMRP Trigger: GGGCCTCATGCATGCTAGGCAAGCACTATACCAGCT...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGGAGGCTCTGTATGACTaGGCAGAAAGGCTGAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: WKPVMYSQENAVMSLKSMEALYD*AERLRF Trigger: GAACCTCAGCCTTTCTGCCCAGTCATACAGAGCCTC...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACAGTCTCCAAGGAGAAGAAAACAAGAGGCTCTTCAGTCAAGTAATAGTCCACCACACCTGGCTTaGCTTCACACTTTTAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: GKQSPRRRKQEALQSSNSPPHLA*LHTFSL Trigger: TAGGCTAAAAGTGTGAAGTCAAGCCAGGTGTGGTGG...ACTATTACTTGACTGAAGAGCCTCTTGTTTTCTTCTCCTTGGAGACTGTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CAA 90 bp | GCTAGTTCCCTGGTTATGAAGTGTGTTCCTGCATTCTGGAGAACTTaGCTGGGTACATGTCTCCTATTTTTGAGTGTGACTGAAATCATG | + |
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Preference number: 2 (lower is better) Translates to: ASSLVMKCVPAFWRT*LGTCLLFLSVTEIM Trigger: CATGATTTCAGTCACACTCAAAAATAGGAGACATGTACCCAGCAAAGTTCTCCAGAATGCAGGAACACACTTCATAACCAGGGAACTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | TACGTGGGACAAACTGGGAGGAAATCAGAGGTGACTACTAAAGAATACAGGGCTGCTGCAAAACACAGATaGTATATGGTATTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YVGQTGRKSEVTTKEYRAAAKHR*YMVFPG Trigger: TCCTGGAAATACCATATACCATCTGTGTTTTGCAGC...AGCCCTGTATTCTTTAGTAGTCACCTCTGATTTCCTCCCAGTTTGTCCCACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGGATCTCTGTGAGTTaGAGTCTAGCCTGGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: HGNRSCTAKKMLLCHSKVWISVS*SLAWST Trigger: TGTAGACCAGGCTAGACTCCAACTCACAGAGATCCA...TACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACAGTCTCCAAGGAGAAGAAAACAAGAGGCTCTTCAGTCAAGTAATAGTTCCTGCACGCCATTTTaGTTTAGCTATCGCATTAGT | + |
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Preference number: 2 (lower is better) Translates to: GKQSPRRRKQEALQSSNSSCTPF*FSYRIS Trigger: ACTAATGCGATAGCTAAATCAAAATGGCGTGCAGGA...ACTATTACTTGACTGAAGAGCCTCTTGTTTTCTTCTCCTTGGAGACTGTTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR GCA 90 bp | CATGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTACATTCTGGAGAACTTTaGTGGGTACATGTCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: HGNRSCTAKKMLLCHSKVHSGEL*WVHVSY Trigger: ATAGGAGACATGTACCCAGCAAAGTTCTCCAGAATG...TACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | TACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGCCACAAGTGCTTAGGGTCGATTTAAAAACCTaGGGCTATTTACCTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YSQENAVMSLKSMPQVLRVDLKT*GYLPGL Trigger: CAGACCAGGTAAATAGCCCCAGGTTTTTAAATCGAC...CCTAAGCACTTGTGGCATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR GCA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGTTAGAGAACAGTCAATaGTCCATAGACTTAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: WKPVMYSQENAVMSLKSMLENSQ*SIDLVS Trigger: GCTAACTAAGTCTATGGAGCATTGACTGTTCTCTAA...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGACATGCCACCACACCTaGCTTGACTTCACACTTTTA | + |
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Preference number: 2 (lower is better) Translates to: GFSWLRRQEDILISIVETTCHHT*LDFTLL Trigger: TAAAAGTGTGAAGTCAAGCCAGGTGTGGTGGCATGT...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGTATGAAGACCCTGCCTaGAACAAACCAAAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: GFSWLRRQEDILISIVETYEDPA*NKPKSI Trigger: GATGCTTTTTGGTTTGTTTCAGGCAGGGTCTTCATA...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAAACAGTCTCCAAGGAGAAGAAAACAAGAGGCTCTTCAGTCAAGTAATAGTACAAAAATTGCTCACTaGACACAGAATCCTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: GKQSPRRRKQEALQSSNSTKIAH*TQNPRN Trigger: ATTTCTAGGATTCTGTGTGCAGTGAGCAATTTTTGT...ACTATTACTTGACTGAAGAGCCTCTTGTTTTCTTCTCCTTGGAGACTGTTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGAATAGTCGAGGAGTATaGCAGAAAAGCCTGATGTAC | + |
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Preference number: 2 (lower is better) Translates to: GFSWLRRQEDILISIVETNSRGV*QKSLMY Trigger: GTACATCAGGCTTTTCTGCCATACTCCTCGACTATT...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CCA 90 bp | TACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGCCACAAGTGCTTAGGCATATAATAAACTATTaGTTTCCTAGGACCTACGTG | + |
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Preference number: 2 (lower is better) Translates to: YSQENAVMSLKSMPQVLRHIINY*FPRTYV Trigger: CACGTAGGTCCTAGGAAACCAATAGTTTATTATATG...CCTAAGCACTTGTGGCATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CAA 90 bp | TTTGGTCTTCTTAAAGAAGTTGGTCTGATAAGAACTGAAGACCATTaGATTCTTGTGCTGCAAAACACAGATGGTATATGGTATTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FGLLKEVGLIRTEDH*ILVLQNTDGIWYFQ Trigger: CTGGAAATACCATATACCATCTGTGTTTTGCAGCACAAGAATCAAATGGTCTTCAGTTCTTATCAGACCAACTTCTTTAAGAAGACCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGCAATTATACATCCTTTAAAGAATGGAAGTACAAAACACGCAGATTCTGAACTGAAGACCATTTaGTTCTTGTGCTGCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: HLAIIHPLKNGSTKHADSELKTI*FLCCKT Trigger: TGTTTTGCAGCACAAGAATCAAATGGTCTTCAGTTC...AGAATCTGCGTGTTTTGTACTTCCATTCTTTAAAGGATGTATAATTGCCAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGCAATTATACATCCTTTAAAGAATGGAAGTACAAAACACGCAGATTCTGTAAACTACTGTTTCTaGAAAGCATCCAATGGCATG | + |
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Preference number: 2 (lower is better) Translates to: HLAIIHPLKNGSTKHADSVNYCF*KASNGM Trigger: CATGCCATTGGATGCTTTTCAGAAACAGTAGTTTAC...AGAATCTGCGTGTTTTGTACTTCCATTCTTTAAAGGATGTATAATTGCCAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGCAATTATACATCCTTTAAAGAATGGAAGTACAAAACACGCAGATTCTCAAGTAATGTGTTCATaGTCGTGGGAAGCAATAATC | + |
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Preference number: 2 (lower is better) Translates to: HLAIIHPLKNGSTKHADSQVMCS*SWEAII Trigger: GATTATTGCTTCCCACGAGCATGAACACATTACTTG...AGAATCTGCGTGTTTTGTACTTCCATTCTTTAAAGGATGTATAATTGCCAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR TCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGTGGTCTGATAAGAACTaGAGACCATTTGATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GFSWLRRQEDILISIVETWSDKN*RPFDSC Trigger: ACAAGAATCAAATGGTCTTCAGTTCTTATCAGACCA...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | CAATGGCATGTCATCCTCCCCCTCAGCACCGCAGAGTaGAGATGGGAAGCTCCAGGCCAGCTCTCAGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QWHVILPLSTAE*RWEAPGQLSVR Trigger: TCTGACTGAGAGCTGGCCTGGAGCTTCCCATCTTCACTCTGCGGTGCTGAGGGGGAGGATGACATGCCATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | GGACCTACGTGGGACAAACTGGGAGGAAATCAGAGGTaGCTACTAAAGAATACAGGGCTTCTTGGAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: GPTWDKLGGNQR*LLKNTGLLGEE Trigger: CTCCTCTCCAAGAAGCCCTGTATTCTTTAGTAGTCACCTCTGATTTCCTCCCAGTTTGTCCCACGTAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | CTATTAGCCCATAGGATTTGGCTAGTTCCCTGGTTATaGAGTGTGTTCCTGCATTCTGGAGAACTTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLAHRIWLVPWL*SVFLHSGELCW Trigger: CCAGCAAAGTTCTCCAGAATGCAGGAACACACTTCATAACCAGGGAACTAGCCAAATCCTATGGGCTAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CAA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGAGAATACAGGGCTTCTaGGAGAGGAGTGAAATGGCC | + |
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Preference number: 3 (lower is better) Translates to: WKPVMYSQENAVMSLKSMRIQGF*ERSEMA Trigger: GGCCATTTCACTCCTCTCCAAGAAGCCCTGTATTCT...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | AGCTACTCCAATGTTGTCAGAGTAAACTACTGTTTCTaGAAAGCATCCAATGGCATGTCATCCTCCCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SYSNVVRVNYCF*KASNGMSSSPS Trigger: TGAGGGGGAGGATGACATGCCATTGGATGCTTTTCAGAAACAGTAGTTTACTCTGACAACATTGGAGTAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | CAGAGAAACCCTGTCTTGGCAAAACCAAAGCAGAGCTaGGAGGAACTAGAATGTAAGTTAGAAGCAGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: QRNPVLAKPKQS*EELECKLEAVV Trigger: TACTACTGCTTCTAACTTACATTCTAGTTCCTCCCAGCTCTGCTTTGGTTTTGCCAAGACAGGGTTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | GACATTTTAATATCCATTGTAGAAACGAGAATGGGCTaGGCACTGATGGTGCACGCCTTTAATCCCAACACT | + |
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Preference number: 3 (lower is better) Translates to: DILISIVETRMG*ALMVHAFNPNT Trigger: AGTGTTGGGATTAAAGGCGTGCACCATCAGTGCCCAGCCCATTCTCGTTTCTACAATGGATATTAAAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | TCTCACTGTGTATCTAATTCTGGTCTTGAACCTGTGTaGAAACTTTCCTGCCTTAGCCTCCTGAGTGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: SHCVSNSGLEPV*KLSCLSLLSVS Trigger: ACTAACACTCAGGAGGCTAAGGCAGGAAAGTTTTCACACAGGTTCAAGACCAGAATTAGATACACAGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | GACAAAATAACCTTGGCCTTTGAGGCTCTGTATGACTaGGCAGAAAGGCTGAGGTTCATTCCTAATCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: DKITLAFEALYD*AERLRFIPNQK Trigger: TTTTTGATTAGGAATGAACCTCAGCCTTTCTGCCCAGTCATACAGAGCCTCAAAGGCCAAGGTTATTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | CAGATTTACAAACCCAGACACTTTCTGTCACTGTACTaGGTTCTGAGTTCTCAGAATGAGCATTTATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QIYKPRHFLSLY*VLSSQNEHLSH Trigger: GTGGGATAAATGCTCATTCTGAGAACTCAGAACCCAGTACAGTGACAGAAAGTGTCTGGGTTTGTAAATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR GCA 72 bp | TACATCATGGAAACCGGTCATGTACAGCCAAGAAAATaGTGTTATGTCACTCAAAAGTATGCCACAAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: YIMETGHVQPRK*CYVTQKYATSA Trigger: AGCACTTGTGGCATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCATGATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | AAATCAGAGGTGACTACTAAAGAATACAGGGCTTCTTaGAGAGGAGTGAAATGGCCTAGATTTATCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: KSEVTTKEYRAS*RGVKWPRFIKW Trigger: CCACTTGATAAATCTAGGCCATTTCACTCCTCTCCAAGAAGCCCTGTATTCTTTAGTAGTCACCTCTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CCA 72 bp | CATCAAGGCTCACAAACAACAGTATTCAATACATCATaGAAACCGGTCATGTACAGCCAAGAAAATGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: HQGSQTTVFNTS*KPVMYSQENAV Trigger: AACAGCATTTTCTTGGCTGTACATGACCGGTTTCCATGATGTATTGAATACTGTTGTTTGTGAGCCTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CAA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGACATGTCTCCTATTTTaGAGTGTGACTGAAATCATG | + |
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Preference number: 3 (lower is better) Translates to: WKPVMYSQENAVMSLKSMTCLLF*SVTEIM Trigger: CATGATTTCAGTCACACTCAAAAATAGGAGACATGT...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCCACATCTGGCAATTATACATCCTTTAAAGAATGGAAGTACAAAACACGCAAGCAGATTTCCAAGTTaGTTCTCATTAGAGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: EPHLAIIHPLKNGSTKHASRFPS*FSLENS Trigger: ACTGTTCTCTAATGAGAACAAACTTGGAAATCTGCT...TGCGTGTTTTGTACTTCCATTCTTTAAAGGATGTATAATTGCCAGATGTGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR GCA 72 bp | AGATTTCCAAGTTTGTTCTCATTAGAGAACAGTCAATaGTCCATAGACTTAGTTAGCAAAACAGAGCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: RFPSLFSLENSQ*SIDLVSKTELK Trigger: CTTGAGCTCTGTTTTGCTAACTAAGTCTATGGAGCATTGACTGTTCTCTAATGAGAACAAACTTGGAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | AGCTCTCAGTCAGAAGCTGAGAACCAACTTCCTAAATaGCCTGAATTTTCTAAGAGAATTCAAATAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: SSQSEAENQLPK*PEFSKRIQIDE Trigger: TTCATCTATTTGAATTCTCTTAGAAAATTCAGGTCATTTAGGAAGTTGGTTCTCAGCTTCTGACTGAGAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR TCA 72 bp | ATAGTACCATATTTCAAGAAGATAGCAGAAATTCAATaGAGTCGATTTAAAAACCTGGGGCTATTTACCTGG | + |
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Preference number: 3 (lower is better) Translates to: IVPYFKKIAEIQ*SRFKNLGLFTW Trigger: CCAGGTAAATAGCCCCAGGTTTTTAAATCGACTTCATTGAATTTCTGCTATCTTCTTGAAATATGGTACTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR GCA 72 bp | AAAAGTACTCTATTTAATAAGATTAACTCTAGAGTCTaGCAGGTATCTGGCTTTCCCTCTTTAAATCCATTG | + |
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Preference number: 3 (lower is better) Translates to: KSTLFNKINSRV*QVSGFPSLNPL Trigger: CAATGGATTTAAAGAGGGAAAGCCAGATACCTGGCAGACTCTAGAGTTAATCTTATTAAATAGAGTACTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR TCA 90 bp | TACGTGGGACAAACTGGGAGGAAATCAGAGGTGACTACTAAAGAATACAGGGCTAAGGCCAGAAGTGTCTaGAGAACTATATCTATTGGT | + |
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Preference number: 4 (lower is better) Translates to: YVGQTGRKSEVTTKEYRAKARSV*RTISIG Trigger: ACCAATAGATATAGTTCTTCAGACACTTCTGGCCTT...AGCCCTGTATTCTTTAGTAGTCACCTCTGATTTCCTCCCAGTTTGTCCCACGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR TCA 90 bp | AATGTTGAGCTTCTTAGCTTTCTAGCTGAAAAAGCTACTCCAATGTTGTCAGAGAGAATTTGTTGCATCTaGAGGCCGGAACAGCACTCG | + |
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Preference number: 4 (lower is better) Translates to: NVELLSFLAEKATPMLSERICCI*RPEQHS Trigger: CGAGTGCTGTTCCGGCCTTCAGATGCAACAAATTCT...CTCTGACAACATTGGAGTAGCTTTTTCAGCTAGAAAGCTAAGAAGCTCAACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CAA 72 bp | CTGGTTATGAAGTGTGTTCCTGCATTCTGGAGAACTTaGCTGGGTACATGTCTCCTATTTTTGAGTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: LVMKCVPAFWRT*LGTCLLFLSVT Trigger: AGTCACACTCAAAAATAGGAGACATGTACCCAGCAAAGTTCTCCAGAATGCAGGAACACACTTCATAACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR TCA 90 bp | GAGCCACATCTGGCAATTATACATCCTTTAAAGAATGGAAGTACAAAACACGCATGGCATCCATGTCTTTaGACTCCCCTGCGATATGAA | + |
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Preference number: 4 (lower is better) Translates to: EPHLAIIHPLKNGSTKHAWHPCL*TPLRYE Trigger: TTCATATCGCAGGGGAGTTCAAAGACATGGATGCCA...TGCGTGTTTTGTACTTCCATTCTTTAAAGGATGTATAATTGCCAGATGTGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR GCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGGCCATAACAGGTAACTaGAAAGGCCAGAAGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GFSWLRRQEDILISIVETAITGN*KGQKCL Trigger: CAGACACTTCTGGCCTTTGCAGTTACCTGTTATGGC...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CAA 72 bp | CTTAGGAAGCAATTATTAGGGAGTTATTGTGCATACTaGCCACCAATTCACAATCTTTATTCCCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRKQLLGSYCAY*PPIHNLYSLQL Trigger: CAGCTGCAGGGAATAAAGATTGTGAATTGGTGGCAAGTATGCACAATAACTCCCTAATAATTGCTTCCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR GCA 90 bp | GGATTTTCTTGGCTGAGAAGACAAGAAGACATTTTAATATCCATTGTAGAAACGGTCTTTGAACTCCCCTaGGATATGAACTATGCCATA | + |
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Preference number: 4 (lower is better) Translates to: GFSWLRRQEDILISIVETVFELP*DMNYAI Trigger: TATGGCATAGTTCATATCGCAGGGGAGTTCAAAGAC...CGTTTCTACAATGGATATTAAAATGTCTTCTTGTCTTCTCAGCCAAGAAAATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| 3UTR CAA 72 bp | CTTAAAGAAGTTGGTCTGATAAGAACTGAAGACCATTaGATTCTTGTGCTGCAAAACACAGATGGTATATGG | + |
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Preference number: 4 (lower is better) Translates to: LKEVGLIRTEDH*ILVLQNTDGIW Trigger: CCATATACCATCTGTGTTTTGCAGCACAAGAATCAAATGGTCTTCAGTTCTTATCAGACCAACTTCTTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR CAA 90 bp | ACGAGAATGGGCTGGGCACTGATGGTGCACGCCTTTAATCCCAACACTTGGAAGACAATGCATCTAGGTTaGAAGAATTTGTTGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: TRMGWALMVHAFNPNTWKTMHLG*KNLLHL Trigger: CAGATGCAACAAATTCTTCAAACCTAGATGCATTGT...CTTCCAAGTGTTGGGATTAAAGGCGTGCACCATCAGTGCCCAGCCCATTCTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR CAA 90 bp | TGGAAACCGGTCATGTACAGCCAAGAAAATGCTGTTATGTCACTCAAAAGTATGCTAGGTTTGAAGAATTaGTTGCATCTGAAGGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: WKPVMYSQENAVMSLKSMLGLKN*LHLKAG Trigger: TCCGGCCTTCAGATGCAACAAATTCTTCAAACCTAG...CATACTTTTGAGTGACATAACAGCATTTTCTTGGCTGTACATGACCGGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS-3UTR CAA 90 bp | AATGTTGAGCTTCTTAGCTTTCTAGCTGAAAAAGCTACTCCAATGTTGTCAGAGGGTTTGAAGAATTTGTaGCATCTGAAGGCCGGAACA | + |
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Preference number: 5 (lower is better) Translates to: NVELLSFLAEKATPMLSEGLKNL*HLKAGT Trigger: TGTTCCGGCCTTCAGATGCAACAAATTCTTCAAACC...CTCTGACAACATTGGAGTAGCTTTTTCAGCTAGAAAGCTAAGAAGCTCAACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS GCA 72 bp | CTCCCCTGCGATATGAACTATGCCATAACAGGTAACTaGAAAGGCCAGAAGTGTCTGAAGAACTATATCTAT | + |
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Preference number: 6 (lower is better) Translates to: LPCDMNYAITGN*KGQKCLKNYIY Trigger: ATAGATATAGTTCTTCAGACACTTCTGGCCTTTGCAGTTACCTGTTATGGCATAGTTCATATCGCAGGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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| CDS TCA 72 bp | TCTTATTCTTTAATTCTGAAGTGGCATCCATGTCTTTaGACTCCCCTGCGATATGAACTATGCCATAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SYSLILKWHPCL*TPLRYELCHNR Trigger: CCTGTTATGGCATAGTTCATATCGCAGGGGAGTTCAAAGACATGGATGCCACTTCAGAATTAAAGAATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059899.3 |
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