Pregenerated sensors for MME (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027820Ensembl transcript IDs: ENSMUST00000029400.7, ENSMUST00000191633.6, ENSMUST00000192002.3, ENSMUST00000194134.6, ENSMUST00000194150.6, ENSMUST00000194324.6, ENSMUST00000194836.6
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTCTTTGGGAGAGTTTGGAAGGAGCATGAATGTTGCAAACAAAAGTaGGTGCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTG | + |
Preference number: 1 (lower is better) Translates to: FFGRVWKEHECCKQK*VLRGKSVLWCPAVL Trigger: CAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGCACTCACTTTTGTTTGCAACATTCATGCTCCTTCCAAACTCTCCCAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCATTAAGGAAAATCATAAGCCAGGTCTTGGATGAATTT | + |
Preference number: 1 (lower is better) Translates to: LGHIKFACPMGLSFQ*WPLRKIISQVLDEF Trigger: AAATTCATCCAAGACCTGGCTTATGATTTTCCTTAATGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR GCA 90 bp | AACAGAGGTTTTTCTAGAGCAGGACAGTTGGCTTTTCTTAACATGTaGTGGGTATGTGGTGCAGTTATAAGTCTATCCTTTACCGACCTG | + |
Preference number: 1 (lower is better) Translates to: NRGFSRAGQLAFLNM*WVCGAVISLSFTDL Trigger: CAGGTCGGTAAAGGATAGACTTATAACTGCACCACATACCCAGCACATGTTAAGAAAAGCCAACTGTCCTGCTCTAGAAAAACCTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CCA 90 bp | TTTGGTCCTTGTTTCCTGGGTAACAGGTTAAAGGGAAGGCAGCATTaGTATGAACTGCTGGAATCTTACTGTCTTCTTTTTGGAGTAAAA | + |
Preference number: 1 (lower is better) Translates to: FGPCFLGNRLKGRQH*YELLESYCLLFGVK Trigger: TTTTACTCCAAAAAGAAGACAGTAAGATTCCAGCAGTTCATACCAATGCTGCCTTCCCTTTAACCTGTTACCCAGGAAACAAGGACCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR TCA 90 bp | CTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTaGACGGTAGTACTACCGTTGGAAAGTAATCATTATTTACACAGT | + |
Preference number: 1 (lower is better) Translates to: LYRQHESCSLCEKQK*TVVLPLESNHYLHS Trigger: ACTGTGTAAATAATGATTACTTTCCAACGGTAGTACTACCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR GCA 90 bp | AAACTATTCAACTCTGTAGTGTTTTCTTGGGGAAACCCTTCTACATaGTTCTTTCTCCTAGAGATATTGGGAACAGTGAAGAGGAAGATG | + |
Preference number: 1 (lower is better) Translates to: KLFNSVVFSWGNPST*FFLLEILGTVKRKM Trigger: CATCTTCCTCTTCACTGTTCCCAATATCTCTAGGAGAAAGAAGCATGTAGAAGGGTTTCCCCAAGAAAACACTACAGAGTTGAATAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR GCA 90 bp | CTTTCTAAACTGACAGATGCCTTCTACTCTAAGAGCTCCATCTATTaGTATAGGAATTATGAACACTTAAGAAAGTTTGCAAGTGTCTGT | + |
Preference number: 1 (lower is better) Translates to: LSKLTDAFYSKSSIY*YRNYEHLRKFASVC Trigger: ACAGACACTTGCAAACTTTCTTAAGTGTTCATAATTCCTATAGCAATAGATGGAGCTCTTAGAGTAGAAGGCATCTGTCAGTTTAGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR TCA 90 bp | AGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGACAATaGACAGTTTATGACTGTGTTGTACTATGTCTTGAACCTTTGACT | + |
Preference number: 1 (lower is better) Translates to: RLITYLLGRAFESGQ*TVYDCVVLCLEPLT Trigger: AGTCAAAGGTTCAAGACATAGTACAACACAGTCATAAACTGTTCATTGTCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATGGGGCCCAGTTTCTCTaGGGGAAGAGTTCCTGTTTC | + |
Preference number: 2 (lower is better) Translates to: GQICALVPCCTEHRPPFDGAQFL*GKSSCF Trigger: GAAACAGGAACTCTTCCCTCAGAGAAACTGGGCCCC...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCGGGGCCCAGTTTCTCTaGGGGAAGAGTTCCTGTTTC | + |
Preference number: 2 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGGAQFL*GKSSCF Trigger: GAAACAGGAACTCTTCCCTCAGAGAAACTGGGCCCC...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATGGGGCCCAGTTTCTCTaGGGGAAGAGTTCCTGTTTC | + |
Preference number: 2 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNGAQFL*GKSSCF Trigger: GAAACAGGAACTCTTCCCTCAGAGAAACTGGGCCCC...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTAACAAAAGTGAGTGCTaGGGGGCAAATCTGTGCTTT | + |
Preference number: 2 (lower is better) Translates to: QNCTSLKATVCMGVLWESNKSEC*GANLCF Trigger: AAAGCACAGATTTGCCCCTCAGCACTCACTTTTGTT...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTGTTGCAAACAAAAGTaGGTGCTGAGGGGCAAATCT | + |
Preference number: 2 (lower is better) Translates to: QNCTSLKATVCMGVLWESCCKQK*VLRGKS Trigger: AGATTTGCCCCTCAGCACTCACTTTTGTTTGCAACA...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR CAA 90 bp | GCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGGAGCATCCTTTaGCCTTGCACACAGACACTATGTTATGGAAGCAGACTCCTTGCC | + |
Preference number: 2 (lower is better) Translates to: AVELEQILNFLGSIL*PCTQTLCYGSRLLA Trigger: GGCAAGGAGTCTGCTTCCATAACATAGTGTCTGTGTGCAAGGCAAAAGGATGCTCCCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | TGTGCCCAAGGTCACTTTGGCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGAAGCTGCAGTCTGTGTaGGAAACAGAAGTGAACGGT | + |
Preference number: 2 (lower is better) Translates to: CAQGHFGSRTRTNPQLPGKLQSV*ETEVNG Trigger: ACCGTTCACTTCTGTTTCTCACACAGACTGCAGCTT...CCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGCCAAAGTGACCTTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGAAGAACATAGGGTTCTaGGTACCAGCTACAACCACT | + |
Preference number: 2 (lower is better) Translates to: LEHKLRARTPAFPDPLFLKNIGF*VPATTT Trigger: AGTGGTTGTAGCTGGTACTCAGAACCCTATGTTCTT...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CAA 90 bp | AGAACTAGAACAAATCCTCAACTTCCTGGGGAGCATCCTTTTGCCTaGCACACAGACACTATGTTATGGAAGCAGACTCCTTGCCAACAC | + |
Preference number: 2 (lower is better) Translates to: RTRTNPQLPGEHPFA*HTDTMLWKQTPCQH Trigger: GTGTTGGCAAGGAGTCTGCTTCCATAACATAGTGTCTGTGTGCAAGGCAAAAGGATGCTCCCCAGGAAGTTGAGGATTTGTTCTAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CCA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGTTCTTTGGGAGAGTTTaGAAGGAGCATGAATGTTGC | + |
Preference number: 2 (lower is better) Translates to: LEHKLRARTPAFPDPLFLFFGRV*KEHECC Trigger: GCAACATTCATGCTCCTTCCAAACTCTCCCAAAGAA...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGAGTTCCTGTTTCCGTaGCTTTGGCAAATCTTGCCG | + |
Preference number: 2 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYEFLFP*LWQILP Trigger: CGGCAAGATTTGCCAAAGCCACGGAAACAGGAACTC...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGATAGGTTTGGAAGCTTaGTCCTTTAATGAACTACCA | + |
Preference number: 2 (lower is better) Translates to: LEHKLRARTPAFPDPLFLIGLEA*SFNELP Trigger: TGGTAGTTCATTAAAGGATCAAGCTTCCAAACCTAT...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGATGTCACCAAGTCACCTaGGTGGTCCAGCTCTTCACA | + |
Preference number: 2 (lower is better) Translates to: SLNPRLITYLLGRAFESGCHQVT*VVQLFT Trigger: TGTGAAGAGCTGGACCACTCAGGTGACTTGGTGACA...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCAGGTCAGGAGAAATaGAGGATTAGGATGTATCAG | + |
Preference number: 2 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTPGQEK*RIRMYQ Trigger: CTGATACATCCTAATCCTTCATTTCTCCTGACCTGG...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGTTCCTGTTTCCGTaGCTTTGGCAAATCTTGCCG | + |
Preference number: 2 (lower is better) Translates to: ALSVNTVLYRQHESCSLCEFLFP*LWQILP Trigger: CGGCAAGATTTGCCAAAGCCACGGAAACAGGAACTC...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | TGTGCCCAAGGTCACTTTGGCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGTTATGTATGGTAAAATaGGTTCAAAACTGCACGAGC | + |
Preference number: 2 (lower is better) Translates to: CAQGHFGSRTRTNPQLPGLCMVK*VQNCTS Trigger: GCTCGTGCAGTTTTGAACTCATTTTACCATACATAA...CCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGCCAAAGTGACCTTGGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAGCAAGTGCTAAGGTCTaGCTTGGGCAAAATGCCAGA | + |
Preference number: 2 (lower is better) Translates to: SLNPRLITYLLGRAFESGASAKV*LGQNAR Trigger: TCTGGCATTTTGCCCAAGTCAGACCTTAGCACTTGC...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATAAGCTGCAGTCTGTGTaGGAAACAGAAGTGAACGGT | + |
Preference number: 2 (lower is better) Translates to: QIQLDPFLATRDRLNLENKLQSV*ETEVNG Trigger: ACCGTTCACTTCTGTTTCTCACACAGACTGCAGCTT...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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3UTR-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCAACAAAAGTGAGTGCTaGGGGGCAAATCTGTGCTTT | + |
Preference number: 2 (lower is better) Translates to: KNLNITKVGEIGEPFQILNKSEC*GANLCF Trigger: AAAGCACAGATTTGCCCCTCAGCACTCACTTTTGTT...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR TCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAGGCCTCTCTTTCCAGTaGTGGCCATTAAGGAAAATC | + |
Preference number: 2 (lower is better) Translates to: SLNPRLITYLLGRAFESGGLSFQ*WPLRKI Trigger: GATTTTCCTTAATGGCCATCACTGGAAAGAGAGGCC...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTTCTTTGGGAGAGTTTaGAAGGAGCATGAATGTTGC | + |
Preference number: 2 (lower is better) Translates to: KNLNITKVGEIGEPFQILFFGRV*KEHECC Trigger: GCAACATTCATGCTCCTTCCAAACTCTCCCAAAGAA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR-3UTR CCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAACAGACACTATGTTATaGAAGCAGACTCCTTGCCAA | + |
Preference number: 2 (lower is better) Translates to: SLNPRLITYLLGRAFESGTDTML*KQTPCQ Trigger: TTGGCAAGGAGTCTGCTTCCATAACATAGTGTCTGT...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CAA 90 bp | CTCTCTGGTACCACACTACTCCATGAACATTGCAGTAATACATACTaGATTCTATGTTTTGGGGGATCCACAATGTTCTTAGTATGTGAT | + |
Preference number: 2 (lower is better) Translates to: LSGTTLLHEHCSNTY*ILCFGGSTMFLVCD Trigger: ATCACATACTAAGAACATTGTGGATCCCCCAAAACATAGAATCAAGTATGTATTACTGCAATGTTCATGGAGTAGTGTGGTACCAGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CAA 90 bp | TTTTCTTGGGGAAACCCTTCTACATGCTTCTTTCTCCTAGAGATATaGGGAACAGTGAAGAGGAAGATGAAATTACTCTTCTCTGTACTA | + |
Preference number: 2 (lower is better) Translates to: FSWGNPSTCFFLLEI*GTVKRKMKLLFSVL Trigger: TAGTACAGAGAAGAGTAATTTCATCTTCCTCTTCACTGTTCCCAATATCTCTAGGAGAAAGAAGCATGTAGAAGGGTTTCCCCAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CAA 90 bp | TTTGTTTTGTTGCTGTTGAGGCAATATCTCATTGGAGAACCAGTCTaGCTTAAAACACTATATGTTCCAAGTTGCCTTTCAAGTTGGTCT | + |
Preference number: 2 (lower is better) Translates to: FVLLLLRQYLIGEPV*LKTLYVPSCLSSWS Trigger: AGACCAACTTGAAAGGCAACTTGGAACATATAGTGTTTTAAGCAAGACTGGTTCTCCAATGAGATATTGCCTCAACAGCAACAAAACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CAA 90 bp | CTGAAGAGTTTGTTTCATACTCTGGTTTATTATAGGGGATTATATTaGATTTGTAGCCATTTCCCCCATTTCCTGCCATCTACATTCCTT | + |
Preference number: 2 (lower is better) Translates to: LKSLFHTLVYYRGLY*ICSHFPHFLPSTFL Trigger: AAGGAATGTAGATGGCAGGAAATGGGGGAAATGGCTACAAATCAAATATAATCCCCTATAATAAACCAGAGTATGAAACAAACTCTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR GCA 72 bp | GCCCTGGCGTTCTCCTGTACTGGGGCATATAAAGTTTaGGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCC | + |
Preference number: 3 (lower is better) Translates to: ALAFSCTGAYKV*VSNGPLFPVMA Trigger: GGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGAGAACGCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR TCA 72 bp | CAGGAAGCTGAAGAAACTTCCGGGGCCCAGTTTCTCTaGGGGAAGAGTTCCTGTTTCCGTGGCTTTGGCAAA | + |
Preference number: 3 (lower is better) Translates to: QEAEETSGAQFL*GKSSCFRGFGK Trigger: TTTGCCAAAGCCACGGAAACAGGAACTCTTCCCTCAGAGAAACTGGGCCCCGGAAGTTTCTTCAGCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR GCA 72 bp | GTGAGTGCTGAGGGGCAAATCTGTGCTTTGGTGCCCTaGTGTACTGAGCATCGTCCTCCTTTTGATCAGAAG | + |
Preference number: 3 (lower is better) Translates to: VSAEGQICALVP*CTEHRPPFDQK Trigger: CTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGCACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR CCA 72 bp | GGCCCAGTTTCTCTGAGGGAAGAGTTCCTGTTTCCGTaGCTTTGGCAAATCTTGCCGTGGATGTTCAGTATC | + |
Preference number: 3 (lower is better) Translates to: GPVSLREEFLFP*LWQILPWMFSI Trigger: GATACTGAACATCCACGGCAAGATTTGCCAAAGCCACGGAAACAGGAACTCTTCCCTCAGAGAAACTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR CCA 72 bp | GTCACATGTGGCTCCTCTGTCACCAAGTCACCTGAGTaGTCCAGCTCTTCACATTTGCACATTTGGCTTCAG | + |
Preference number: 3 (lower is better) Translates to: VTCGSSVTKSPE*SSSSHLHIWLQ Trigger: CTGAAGCCAAATGTGCAAATGTGAAGAGCTGGACCACTCAGGTGACTTGGTGACAGAGGAGCCACATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR CCA 72 bp | GAGCATCCTTTTGCCTTGCACACAGACACTATGTTATaGAAGCAGACTCCTTGCCAACACATACTGCCAGGA | + |
Preference number: 3 (lower is better) Translates to: EHPFALHTDTML*KQTPCQHILPG Trigger: TCCTGGCAGTATGTGTTGGCAAGGAGTCTGCTTCCATAACATAGTGTCTGTGTGCAAGGCAAAAGGATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CAA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGTTCACTTCTGTCTCTTaGGCTGCTATGACAGGACAT | + |
Preference number: 3 (lower is better) Translates to: LEHKLRARTPAFPDPLFLFTSVS*AAMTGH Trigger: ATGTCCTGTCATAGCAGCCAAAGAGACAGAAGTGAA...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CAA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGAATAAACATGCTATTTaGACAACAGTCACATGTGGC | + |
Preference number: 3 (lower is better) Translates to: LEHKLRARTPAFPDPLFLNKHAI*TTVTCG Trigger: GCCACATGTGACTGTTGTCAAAATAGCATGTTTATT...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR TCA 72 bp | AGGCACCAGAGTTGCTGTTACATAGGTTTGGAAGCTTaGTCCTTTAATGAACTACCAGTGGAGATGCTAGTG | + |
Preference number: 3 (lower is better) Translates to: RHQSCCYIGLEA*SFNELPVEMLV Trigger: CACTAGCATCTCCACTGGTAGTTCATTAAAGGATCAAGCTTCCAAACCTATGTAACAGCAACTCTGGTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR TCA 72 bp | ATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCATTAAGGAAAATCATAAGCCAGGTCTTG | + |
Preference number: 3 (lower is better) Translates to: IKFACPMGLSFQ*WPLRKIISQVL Trigger: CAAGACCTGGCTTATGATTTTCCTTAATGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR-3UTR CAA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATCTGTATGGGAGTTCTTaGGGAGAGTTTGGAAGGAGC | + |
Preference number: 3 (lower is better) Translates to: QIQLDPFLATRDRLNLENLYGSS*GEFGRS Trigger: GCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAG...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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3UTR TCA 72 bp | CGAACACCAGCCTTTCCAGACCCTTTGTTTCTGAGTTaGGAACCCATGATTATTGCTTGCAAGAAACAATAC | + |
Preference number: 3 (lower is better) Translates to: RTPAFPDPLFLS*EPMIIACKKQY Trigger: GTATTGTTTCTTGCAAGCAATAATCATGGGTTCTCAACTCAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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3UTR GCA 72 bp | GAACCAGTCTTGCTTAAAACACTATATGTTCCAAGTTaGCTTTCAAGTTGGTCTGAAGCCCCCAGTAATCCT | + |
Preference number: 3 (lower is better) Translates to: EPVLLKTLYVPS*LSSWSEAPSNP Trigger: AGGATTACTGGGGGCTTCAGACCAACTTGAAAGGCAACTTGGAACATATAGTGTTTTAAGCAAGACTGGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR GCA 72 bp | AACTCTGTAGTGTTTTCTTGGGGAAACCCTTCTACATaGTTCTTTCTCCTAGAGATATTGGGAACAGTGAAG | + |
Preference number: 3 (lower is better) Translates to: NSVVFSWGNPST*FFLLEILGTVK Trigger: CTTCACTGTTCCCAATATCTCTAGGAGAAAGAAGCATGTAGAAGGGTTTCCCCAAGAAAACACTACAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR CCA 72 bp | TGTTTCCTGGGTAACAGGTTAAAGGGAAGGCAGCATTaGTATGAACTGCTGGAATCTTACTGTCTTCTTTTT | + |
Preference number: 3 (lower is better) Translates to: CFLGNRLKGRQH*YELLESYCLLF Trigger: AAAAAGAAGACAGTAAGATTCCAGCAGTTCATACCAATGCTGCCTTCCCTTTAACCTGTTACCCAGGAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR CCA 72 bp | TCACCTGAGTGGTCCAGCTCTTCACATTTGCACATTTaGCTTCAGCATAATCCAATTATAATTGTGACTCCT | + |
Preference number: 3 (lower is better) Translates to: SPEWSSSSHLHI*LQHNPIIIVTP Trigger: AGGAGTCACAATTATAATTGGATTATGCTGAAGCCAAATGTGCAAATGTGAAGAGCTGGACCACTCAGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR-3UTR CAA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAGAGCATCCTTTTGCCTaGCACACAGACACTATGTTA | + |
Preference number: 3 (lower is better) Translates to: SLNPRLITYLLGRAFESGEHPFA*HTDTML Trigger: TAACATAGTGTCTGTGTGCAAGGCAAAAGGATGCTC...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR-3UTR CAA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGACTCTGTAGTGTTTTCTaGGGGAAACCCTTCTACATG | + |
Preference number: 3 (lower is better) Translates to: SLNPRLITYLLGRAFESGLCSVF*GKPFYM Trigger: CATGTAGAAGGGTTTCCCCAAGAAAACACTACAGAG...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR TCA 72 bp | CAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTaGACGGTAGTACTACCGTTGGAAAGTAATCATTAT | + |
Preference number: 3 (lower is better) Translates to: QHESCSLCEKQK*TVVLPLESNHY Trigger: ATAATGATTACTTTCCAACGGTAGTACTACCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
3UTR GCA 72 bp | TTTTCTAGAGCAGGACAGTTGGCTTTTCTTAACATGTaGTGGGTATGTGGTGCAGTTATAAGTCTATCCTTT | + |
Preference number: 3 (lower is better) Translates to: FSRAGQLAFLNM*WVCGAVISLSF Trigger: AAAGGATAGACTTATAACTGCACCACATACCCAGCACATGTTAAGAAAAGCCAACTGTCCTGCTCTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR TCA 72 bp | GTCTTGGATGAATTTGTCTTTCCAGGTCAGGAGAAATaGAGGATTAGGATGTATCAGATTAGAGATATTGTC | + |
Preference number: 3 (lower is better) Translates to: VLDEFVFPGQEK*RIRMYQIRDIV Trigger: GACAATATCTCTAATCTGATACATCCTAATCCTTCATTTCTCCTGACCTGGAAAGACAAATTCATCCAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR TCA 72 bp | TGTTTCATACTCTGGTTTATTATAGGGGATTATATTTaGTTTGTAGCCATTTCCCCCATTTCCTGCCATCTA | + |
Preference number: 3 (lower is better) Translates to: CFILWFIIGDYI*FVAISPISCHL Trigger: TAGATGGCAGGAAATGGGGGAAATGGCTACAAATCAAATATAATCCCCTATAATAAACCAGAGTATGAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR TCA 72 bp | ACATATCTACTAGGTAGAGCCTTTGAATCTGGACAATaGACAGTTTATGACTGTGTTGTACTATGTCTTGAA | + |
Preference number: 3 (lower is better) Translates to: TYLLGRAFESGQ*TVYDCVVLCLE Trigger: TTCAAGACATAGTACAACACAGTCATAAACTGTTCATTGTCCAGATTCAAAGGCTCTACCTAGTAGATATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR TCA 72 bp | CTTGACCAAAACCTTAATCTGTCTAAAACACCAAACTaGAGAGTTTGTTTCATACTCTGGTTTATTATAGGG | + |
Preference number: 3 (lower is better) Translates to: LDQNLNLSKTPN*RVCFILWFIIG Trigger: CCCTATAATAAACCAGAGTATGAAACAAACTCTTCAGTTTGGTGTTTTAGACAGATTAAGGTTTTGGTCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR TCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAAGCACAGAGAGGCTaGTCTCCAGGGGAGTCCATC | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDQAQRG*SPGESI Trigger: GATGGACTCCCCTGGAGATCAGCCTCTCTGTGCTTG...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTGCCCCCATAGTTCAATaGGTTGGATTGCTGAGCACT | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPAPIVQ*VGLLST Trigger: AGTGCTCAGCAATCCAACTCATTGAACTATGGGGGC...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTAACTCGGCAGAGTTCTaGAAAGTCCCAATGATCCTG | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPNSAEF*KVPMIL Trigger: CAGGATCATTGGGACTTTGCAGAACTCTGCCGAGTT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAAACTGGTCTCGGGAATaGCGTTGCGTTTCAACCAGC | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSNWSRE*RCVSTS Trigger: GCTGGTTGAAACGCAACGTCATTCCCGAGACCAGTT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGTTATTTGCCGACTGCTaGGTCCACCAGTCAACGAGG | + |
Preference number: 4 (lower is better) Translates to: LEHKLRARTPAFPDPLFLLFADC*VHQSTR Trigger: CCTCGTTGACTGGTGGACGCAGCAGTCGGCAAATAA...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATTATTTGCCGACTGCTaGGTCCACCAGTCAACGAGG | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSLFADC*VHQSTR Trigger: CCTCGTTGACTGGTGGACGCAGCAGTCGGCAAATAA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATGAGGCATCCATATTCTaGATCAGTCGAGCAGCTGAT | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDEASIF*ISRAAD Trigger: ATCAGCTGCTCGACTGATTCAGAATATGGATGCCTC...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCACCTTGTAGTTTCGGCTaGGGCTGCTTACAAGATCCA | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSPCSFG*GCLQDP Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAAACTACAAGG...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATGAATTCTTGCGGCAATaGAAGGCATCTGCAAACTCG | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDEFLRQ*KASANS Trigger: CGAGTTTGCAGATGCCTTTCATTGCCGCAAGAATTC...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTGCAGTCTGATGATTTaGAAATGCCATCATCATAGG | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPCSLMI*KCHHHR Trigger: CCTATGATGATGGCATTTGCAAATCATCAGACTGCA...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTTATTTGCCGACTGCTaGGTCCACCAGTCAACGAGG | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNLFADC*VHQSTR Trigger: CCTCGTTGACTGGTGGACGCAGCAGTCGGCAAATAA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTAATAGAATTGACTaGATACTCTGGCCGGTAGGT | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPFNRID*ILWPVG Trigger: ACCTACCGGCCAGAGTATGCAGTCAATTCTATTAAA...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTAACTCGGCAGAGTTCTaGAAAGTCCCAATGATCCTG | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESNSAEF*KVPMIL Trigger: CAGGATCATTGGGACTTTGCAGAACTCTGCCGAGTT...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTCATGTATGAATTCTTaGGGCAATGAAAGGCATCTG | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPSCMNS*GNERHL Trigger: CAGATGCCTTTCATTGCCGCAAGAATTCATACATGA...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTAATTCAGTTGTGCAATaGATTTCTCAGCTGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPNSVVQ*ISQLSK Trigger: CTTGGACAGCTGAGAAATCCATTGCACAACTGAATT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTCTCCACAAGCATACTTaGAGAAGTCTGTACATGGCT | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESLHKHT*RSLYMA Trigger: AGCCATGTACAGACTTCTTCAAGTATGCTTGTGGAG...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCTTGATCCCAGTTATCTaGTGCTACTGGCCACCCATA | + |
Preference number: 4 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGLIPVI*CYWPPI Trigger: TATGGGTGGCCAGTAGCATCAGATAACTGGGATCAA...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTCTGGATTCATGTATaGATTCTTGCGGCAATGAAA | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPFWIHV*ILAAMK Trigger: TTTCATTGCCGCAAGAATTCATACATGAATCCAGAA...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTCTTTATATATTCCAGTaGACTCATAGTAGTCTCTGG | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPLYIFQ*THSSLW Trigger: CCAGAGACTACTATGAGTGCACTGGAATATATAAAG...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTAATCCTTTCTTTAATTaGCAAGGCCTTTTCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPNPFFN*QGLFFS Trigger: GCTGAAGAAAAGGCCTTGGCAATTAAAGAAAGGATT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAAAATTATTTGCCGACTaGTGCGTCCACCAGTCAACG | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSKLFAD*CVHQST Trigger: CGTTGACTGGTGGACGCAGCAGTCGGCAAATAATTT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTGAAGAAGTCTGTACATaGCTCAACAGAGGCATCCAT | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESEEVCT*LNRGIH Trigger: ATGGATGCCTCTGTTGAGCCATGTACAGACTTCTTC...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTAGTTGTTCTGCAGCTTaGCCAATGTCATTTTGTTAT | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPSCSAA*PMSFCY Trigger: ATAACAAAATGACATTGGCCAAGCTGCAGAACAACT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGCAAGCACAGAGAGGCTaGTCTCCAGGGGAGTCCATC | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLQAQRG*SPGESI Trigger: GATGGACTCCCCTGGAGATCAGCCTCTCTGTGCTTG...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATGAGGCATCCATATTCTaGATCAGTCGAGCAGCTGAT | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNEASIF*ISRAAD Trigger: ATCAGCTGCTCGACTGATTCAGAATATGGATGCCTC...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTATCTGGTAACAGTTTaGGTAGAGGTTGTCCGCCTC | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNYLVTV*VEVVRL Trigger: GAGGCGGACAACCTCTACTCAAACTGTTACCAGATA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATGCCATCATCATAGGTTaGATAGAGAGCGATCATTGT | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDAIIIG*IESDHC Trigger: ACAATGATCGCTCTCTATGCAACCTATGATGATGGC...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGCTTCAACCACGTGCTTaGTCTCTCCAGCAAAAGCCG | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERLQPRA*SLQQKP Trigger: CGGCTTTTGCTGGAGAGAGCAAGCACGTGGTTGAAG...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTATTTCCAAAGAGAGCTaGTTTTCATCAATAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: AEGQICALVPCCTEHRPPISKES*FSSIGK Trigger: TTTGCCTATTGATGAAAACCAGCTCTCTTTGGAAAT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTGTCATTTCGGTCTTCTaGTTTAGTTGTAGCATTGGC | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESVISVF*FSCSIG Trigger: GCCAATGCTACAACTAAACCAGAAGACCGAAATGAC...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATCTCCACAAGCATACTTaGAGAAGTCTGTACATGGCT | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNLHKHT*RSLYMA Trigger: AGCCATGTACAGACTTCTTCAAGTATGCTTGTGGAG...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATAGGAATAAAATGCATTaGCTACAGCTGCTCCACTTA | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDRNKMH*LQLLHL Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTATTCCT...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTAGGAATAAAATGCATTaGCTACAGCTGCTCCACTTA | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESRNKMH*LQLLHL Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTATTCCT...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGTGGATTGCTGAGCACTaGAGAATGGGGGCTGCAAAA | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERWIAEH*RMGAAK Trigger: TTTTGCAGCCCCCATTCTTCAGTGCTCAGCAATCCA...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCAATGAGTTGGATTGCTaGGCACTGAAGAATGGGGGC | + |
Preference number: 4 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTNELDC*ALKNGG Trigger: GCCCCCATTCTTCAGTGCTCAGCAATCCAACTCATT...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR TCA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCATAGTTGTTTGTGATTaGGGTCAAGTCCAGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGIVVCD*GQVQGV Trigger: TACTCCCTGGACTTGACCTCAATCACAAACAACTAT...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR CCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTAATTCAGTTGTGCAATaGATTTCTCAGCTGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESNSVVQ*ISQLSK Trigger: CTTGGACAGCTGAGAAATCCATTGCACAACTGAATT...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCAACTGGTCTCGGGAATaGCGTTGCGTTTCAACCAGC | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILNWSRE*RCVSTS Trigger: GCTGGTTGAAACGCAACGTCATTCCCGAGACCAGTT...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCTATCTGGTAACAGTTTaGGTAGAGGTTGTCCGCCTC | + |
Preference number: 4 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTYLVTV*VEVVRL Trigger: GAGGCGGACAACCTCTACTCAAACTGTTACCAGATA...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATCCTTGTAGTTTCGGCTaGGGCTGCTTACAAGATCCA | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYPCSFG*GCLQDP Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAAACTACAAGG...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATGTTCTCATTGGAAATaGTGTCATCAGGATAGCCAA | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSCSHWK*CHQDSQ Trigger: TTGGCTATCCTGATGACATCATTTCCAATGAGAACA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATATCTGATTTCGGCCTaGGGAATAAAATGCATTGAC | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSYLISA*GIKCID Trigger: GTCAATGCATTTTATTCCTCAGGCCGAAATCAGATA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATTGGATTGCTGAGCACTaGAGAATGGGGGCTGCAAAA | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYWIAEH*RMGAAK Trigger: TTTTGCAGCCCCCATTCTTCAGTGCTCAGCAATCCA...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGCCCCCATAGTTCAATaGGTTGGATTGCTGAGCACT | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYAPIVQ*VGLLST Trigger: AGTGCTCAGCAATCCAACTCATTGAACTATGGGGGC...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR GCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTGAGCAGCTGATTTTATaGAGTCTGATGATTTGCAAA | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESEQLIL*SLMICK Trigger: TTTGCAAATCATCAGACTGCATAAAATCAGCTGCTC...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATAAGGTTTTTGCTTTCTaGACTGCTACTATGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDKVFAF*TATMSS Trigger: TGAAGACATAGTAGCAGTGCAGAAAGCAAAAACCTT...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATTCTGTACAAGGTTTTTaGTTTCTGCACTGCTACTAT | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDSVQGF*FLHCYY Trigger: ATAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGA...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTCTTTATATATTCCAGTaGACTCATAGTAGTCTCTGG | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESLYIFQ*THSSLW Trigger: CCAGAGACTACTATGAGTGCACTGGAATATATAAAG...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGTCCCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERSHKGP*GKHFWT Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGGA...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGCTTCAACCACGTGCTTaGTCTCTCCAGCAAAAGCCG | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLLQPRA*SLQQKP Trigger: CGGCTTTTGCTGGAGAGAGCAAGCACGTGGTTGAAG...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGAAATTATTTGCCGACTaGTGCGTCCACCAGTCAACG | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERKLFAD*CVHQST Trigger: CGTTGACTGGTGGACGCAGCAGTCGGCAAATAATTT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATCATGTATGAATTCTTaGGGCAATGAAAGGCATCTG | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSSCMNS*GNERHL Trigger: CAGATGCCTTTCATTGCCGCAAGAATTCATACATGA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTCTATGTCTTCAGTTTTaGGTTCTTGAAGGACATCTT | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESLCLQF*VLEGHL Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGACATAG...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCAATTCAGTTGTGCAATaGATTTCTCAGCTGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGNSVVQ*ISQLSK Trigger: CTTGGACAGCTGAGAAATCCATTGCACAACTGAATT...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATACTCATAGTAGTCTCTaGAAGGGAGGCCAAGTCGAG | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYTHSSL*KGGQVE Trigger: CTCGACTTGGCCTCCCTTCCAGAGACTACTATGAGT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGAACTCATAGTAGTCTCTaGAAGGGAGGCCAAGTCGAG | + |
Preference number: 4 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRTHSSL*KGGQVE Trigger: CTCGACTTGGCCTCCCTTCCAGAGACTACTATGAGT...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATAGTTGTTCTGCAGCTTaGCCAATGTCATTTTGTTAT | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDSCSAA*PMSFCY Trigger: ATAACAAAATGACATTGGCCAAGCTGCAGAACAACT...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTGAAAAGTTTCCATACTaGTATACCATACACTGGGAT | + |
Preference number: 4 (lower is better) Translates to: QNCTSLKATVCMGVLWESEKFPY*YTIHWD Trigger: ATCCCAGTGTATGGTATACCAGTATGGAAACTTTTC...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATTGGCTTTGGAGCATTaGTATCAGTTATATCCATCT | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSLALEH*YQLYPS Trigger: AGATGGATATAACTGATATCAATGCTCCAAAGCCAA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAAACTGGTCTCGGGAATaGCGTTGCGTTTCAACCAGC | + |
Preference number: 4 (lower is better) Translates to: SLNPRLITYLLGRAFESGNWSRE*RCVSTS Trigger: GCTGGTTGAAACGCAACGTCATTCCCGAGACCAGTT...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTATCTGATTTCGGCCTaGGGAATAAAATGCATTGAC | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNYLISA*GIKCID Trigger: GTCAATGCATTTTATTCCTCAGGCCGAAATCAGATA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTGGATTGCTGAGCACTaGAGAATGGGGGCTGCAAAA | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILWIAEH*RMGAAK Trigger: TTTTGCAGCCCCCATTCTTCAGTGCTCAGCAATCCA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGAATGAGTTGGATTGCTaGGCACTGAAGAATGGGGGC | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLNELDC*ALKNGG Trigger: GCCCCCATTCTTCAGTGCTCAGCAATCCAACTCATT...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTAATGAGTTGGATTGCTaGGCACTGAAGAATGGGGGC | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCNELDC*ALKNGG Trigger: GCCCCCATTCTTCAGTGCTCAGCAATCCAACTCATT...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGGCCCCCATAGTTCAATaGGTTGGATTGCTGAGCACT | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLAPIVQ*VGLLST Trigger: AGTGCTCAGCAATCCAACTCATTGAACTATGGGGGC...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TGTGCCCAAGGTCACTTTGGCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGTGCAGTCTGATGATTTaGAAATGCCATCATCATAGG | + |
Preference number: 4 (lower is better) Translates to: CAQGHFGSRTRTNPQLPGCSLMI*KCHHHR Trigger: CCTATGATGATGGCATTTGCAAATCATCAGACTGCA...CCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGCCAAAGTGACCTTGGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR GCA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATTTTTGCTTTCTGCACTaGTACTATGTCTTCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: GQICALVPCCTEHRPPFDFCFLH*YYVFSF Trigger: AAAACTGAAGACATAGTAGCAGTGCAGAAAGCAAAA...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCAAGGTTTTTGCTTTCTaGACTGCTACTATGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGKVFAF*TATMSS Trigger: TGAAGACATAGTAGCAGTGCAGAAAGCAAAAACCTT...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCATCTGTACAAGGTTTTTaGTTTCTGCACTGCTACTAT | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSSVQGF*FLHCYY Trigger: ATAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGA...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR GCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATTCCCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYSHKGP*GKHFWT Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGGA...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR GCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGACTTCAACCACGTGCTTaGTCTCTCCAGCAAAAGCCG | + |
Preference number: 4 (lower is better) Translates to: SLNPRLITYLLGRAFESGLQPRA*SLQQKP Trigger: CGGCTTTTGCTGGAGAGAGCAAGCACGTGGTTGAAG...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTTTAATAGAATTGACTaGATACTCTGGCCGGTAGGT | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNFNRID*ILWPVG Trigger: ACCTACCGGCCAGAGTATGCAGTCAATTCTATTAAA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR GCA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGAAACTCGGCAGAGTTCTaGAAAGTCCCAATGATCCTG | + |
Preference number: 4 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRNSAEF*KVPMIL Trigger: CAGGATCATTGGGACTTTGCAGAACTCTGCCGAGTT...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTCATGTATGAATTCTTaGGGCAATGAAAGGCATCTG | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNSCMNS*GNERHL Trigger: CAGATGCCTTTCATTGCCGCAAGAATTCATACATGA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTCGCTGTTTCTTCTTTaGCTTTGGAGCATTGATATC | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNSLFLL*LWSIDI Trigger: GATATCAATGCTCCAAAGCCAAAGAAGAAACAGCGA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CCA 90 bp | CTGGAGCATAAACTTCGAGCACGAACACCAGCCTTTCCAGACCCTTTGTTTCTGCTATGTCTTCAGTTTTaGGTTCTTGAAGGACATCTT | + |
Preference number: 4 (lower is better) Translates to: LEHKLRARTPAFPDPLFLLCLQF*VLEGHL Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGACATAG...CAGAAACAAAGGGTCTGGAAAGGCTGGTGTTCGTGCTCGAAGTTTATGCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR CCA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAGAAAAGTTTCCATACTaGTATACCATACACTGGGAT | + |
Preference number: 4 (lower is better) Translates to: CALVPCCTEHRPPFDQKSEKFPY*YTIHWD Trigger: ATCCCAGTGTATGGTATACCAGTATGGAAACTTTTC...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TGTGCCCAAGGTCACTTTGGCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGTTGGCTTTGGAGCATTaGTATCAGTTATATCCATCT | + |
Preference number: 4 (lower is better) Translates to: CAQGHFGSRTRTNPQLPGLALEH*YQLYPS Trigger: AGATGGATATAACTGATATCAATGCTCCAAAGCCAA...CCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGCCAAAGTGACCTTGGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTTGGCTTTGGAGCATTaGTATCAGTTATATCCATCT | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNLALEH*YQLYPS Trigger: AGATGGATATAACTGATATCAATGCTCCAAAGCCAA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGGAGGCATCCATATTCTaGATCAGTCGAGCAGCTGAT | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLEASIF*ISRAAD Trigger: ATCAGCTGCTCGACTGATTCAGAATATGGATGCCTC...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATCTCCACAAGCATACTTaGAGAAGTCTGTACATGGCT | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYLHKHT*RSLYMA Trigger: AGCCATGTACAGACTTCTTCAAGTATGCTTGTGGAG...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATGGACATCTTTCAAAATaGCTTCTAGCTCATCTCTTA | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNGHLSK*LLAHLL Trigger: TAAGAGATGAGCTAGAAGTCATTTTGAAAGATGTCC...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTATCTGGTAACAGTTTaGGTAGAGGTTGTCCGCCTC | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILYLVTV*VEVVRL Trigger: GAGGCGGACAACCTCTACTCAAACTGTTACCAGATA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTTTGATCCCAGTTATCTaGTGCTACTGGCCACCCATA | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCLIPVI*CYWPPI Trigger: TATGGGTGGCCAGTAGCATCAGATAACTGGGATCAA...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTTGATCCCAGTTATCTaGTGCTACTGGCCACCCATA | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILLIPVI*CYWPPI Trigger: TATGGGTGGCCAGTAGCATCAGATAACTGGGATCAA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGGAATTCTTGCGGCAATaGAAGGCATCTGCAAACTCG | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLEFLRQ*KASANS Trigger: CGAGTTTGCAGATGCCTTTCATTGCCGCAAGAATTC...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCGAATTCTTGCGGCAATaGAAGGCATCTGCAAACTCG | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILEFLRQ*KASANS Trigger: CGAGTTTGCAGATGCCTTTCATTGCCGCAAGAATTC...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATTTCTGGATTCATGTATaGATTCTTGCGGCAATGAAA | + |
Preference number: 4 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNFWIHV*ILAAMK Trigger: TTTCATTGCCGCAAGAATTCATACATGAATCCAGAA...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTCCCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLSHKGP*GKHFWT Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGGA...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATTGCATTGACTACAGCTaGTCCACTTATCCACTCATC | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYCIDYS*STYPLI Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGAAATTATTTGCCGACTaGTGCGTCCACCAGTCAACG | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLKLFAD*CVHQST Trigger: CGTTGACTGGTGGACGCAGCAGTCGGCAAATAATTT...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGAGAAGTGCCATATGTTTaGTCCCAGTTATCTGATGCT | + |
Preference number: 4 (lower is better) Translates to: LMTNLKAKHSWSNTDTVREVPYV*SQLSDA Trigger: AGCATCAGATAACTGGGATCAAACATATGGCACTTC...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGAGGTCATCCAAAGTCTaGATAAAAACTTCCCGGATT | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERRSSKV*IKTSRI Trigger: AATCCGGGAAGTTTTTATTCAGACTTTGGATGACCT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATATAGTTGTTTGTGATTaGGGTCAAGTCCAGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYIVVCD*GQVQGV Trigger: TACTCCCTGGACTTGACCTCAATCACAAACAACTAT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTCGGAGCTTCTTTAGCTaGTTGCTTTGGCTGAATTTC | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCRSFFS*LLWLNF Trigger: GAAATTCAGCCAAAGCAAGCAGCTAAAGAAGCTCCG...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTTGCATTGACTACAGCTaGTCCACTTATCCACTCATC | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCCIDYS*STYPLI Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGTCGCTGTTTCTTCTTTaGCTTTGGAGCATTGATATC | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERSLFLL*LWSIDI Trigger: GATATCAATGCTCCAAAGCCAAAGAAGAAACAGCGA...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCGAAGAAGTCTGTACATaGCTCAACAGAGGCATCCAT | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILEEVCT*LNRGIH Trigger: ATGGATGCCTCTGTTGAGCCATGTACAGACTTCTTC...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR CAA 72 bp | GTCACCAAGTCACCTGAGTGGTCCAGCTCTTCACATTaGCACATTTGGCTTCAGCATAATCCAATTATAATT | + |
Preference number: 4 (lower is better) Translates to: VTKSPEWSSSSH*HIWLQHNPIII Trigger: AATTATAATTGGATTATGCTGAAGCCAAATGTGCAAATGTGAAGAGCTGGACCACTCAGGTGACTTGGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAAGTGCCATATGTTTaGTCCCAGTTATCTGATGCT | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCEVPYV*SQLSDA Trigger: AGCATCAGATAACTGGGATCAAACATATGGCACTTC...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCGAAGTGCCATATGTTTaGTCCCAGTTATCTGATGCT | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILEVPYV*SQLSDA Trigger: AGCATCAGATAACTGGGATCAAACATATGGCACTTC...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATAGGTCATCCAAAGTCTaGATAAAAACTTCCCGGATT | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYRSSKV*IKTSRI Trigger: AATCCGGGAAGTTTTTATTCAGACTTTGGATGACCT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGATGTTCTCATTGGAAATaGTGTCATCAGGATAGCCAA | + |
Preference number: 4 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRCSHWK*CHQDSQ Trigger: TTGGCTATCCTGATGACATCATTTCCAATGAGAACA...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTATAGTTGTTTGTGATTaGGGTCAAGTCCAGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCIVVCD*GQVQGV Trigger: TACTCCCTGGACTTGACCTCAATCACAAACAACTAT...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGCCATCATCATAGGTTaGATAGAGAGCGATCATTGT | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCAIIIG*IESDHC Trigger: ACAATGATCGCTCTCTATGCAACCTATGATGATGGC...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGAAGGTTTTTGCTTTCTaGACTGCTACTATGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERKVFAF*TATMSS Trigger: TGAAGACATAGTAGCAGTGCAGAAAGCAAAAACCTT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGCTTTATATATTCCAGTaGACTCATAGTAGTCTCTGG | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERLYIFQ*THSSLW Trigger: CCAGAGACTACTATGAGTGCACTGGAATATATAAAG...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGAATCCTTTCTTTAATTaGCAAGGCCTTTTCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERNPFFN*QGLFFS Trigger: GCTGAAGAAAAGGCCTTGGCAATTAAAGAAAGGATT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATCGGAGCTTCTTTAGCTaGTTGCTTTGGCTGAATTTC | + |
Preference number: 4 (lower is better) Translates to: QIQLDPFLATRDRLNLENRSFFS*LLWLNF Trigger: GAAATTCAGCCAAAGCAAGCAGCTAAAGAAGCTCCG...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGGTCATTTCGGTCTTCTaGTTTAGTTGTAGCATTGGC | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLVISVF*FSCSIG Trigger: GCCAATGCTACAACTAAACCAGAAGACCGAAATGAC...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGGAAAAGTTTCCATACTaGTATACCATACACTGGGAT | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSEREKFPY*YTIHWD Trigger: ATCCCAGTGTATGGTATACCAGTATGGAAACTTTTC...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTAGGTCATCCAAAGTCTaGATAAAAACTTCCCGGATT | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCRSSKV*IKTSRI Trigger: AATCCGGGAAGTTTTTATTCAGACTTTGGATGACCT...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTGTTCTCATTGGAAATaGTGTCATCAGGATAGCCAA | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILCSHWK*CHQDSQ Trigger: TTGGCTATCCTGATGACATCATTTCCAATGAGAACA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR TCA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGATTCTGGATTCATGTATaGATTCTTGCGGCAATGAAA | + |
Preference number: 4 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRFWIHV*ILAAMK Trigger: TTTCATTGCCGCAAGAATTCATACATGAATCCAGAA...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR GCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATGCCATCATCATAGGTTaGATAGAGAGCGATCATTGT | + |
Preference number: 4 (lower is better) Translates to: QIQLDPFLATRDRLNLENAIIIG*IESDHC Trigger: ACAATGATCGCTCTCTATGCAACCTATGATGATGGC...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR GCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGAGCAGCTGATTTTATaGAGTCTGATGATTTGCAAA | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYEQLIL*SLMICK Trigger: TTTGCAAATCATCAGACTGCATAAAATCAGCTGCTC...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGTTTAGAATTCAGTTGTaGAATGGATTTCTCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERFRIQL*NGFLSC Trigger: ACAGCTGAGAAATCCATTGCACAACTGAATTCTAAA...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCTTTAGAATTCAGTTGTaGAATGGATTTCTCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTFRIQL*NGFLSC Trigger: ACAGCTGAGAAATCCATTGCACAACTGAATTCTAAA...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR GCA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGAATCCACATATGCTGTaGAAGCCTCTTTATATATTC | + |
Preference number: 4 (lower is better) Translates to: FSTDNMKAAVCVRNRSERNPHML*KPLYIF Trigger: GAATATATAAAGAGGCTTGCACAGCATATGTGGATT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCGGACATCTTTCAAAATaGCTTCTAGCTCATCTCTTA | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILGHLSK*LLAHLL Trigger: TAAGAGATGAGCTAGAAGTCATTTTGAAAGATGTCC...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGGACATCTTTCAAAATaGCTTCTAGCTCATCTCTTA | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCGHLSK*LLAHLL Trigger: TAAGAGATGAGCTAGAAGTCATTTTGAAAGATGTCC...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR TCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATAGGAATAAAATGCATTaGCTACAGCTGCTCCACTTA | + |
Preference number: 4 (lower is better) Translates to: QIQLDPFLATRDRLNLENRNKMH*LQLLHL Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTATTCCT...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR TCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATTATCTGATTTCGGCCTaGGGAATAAAATGCATTGAC | + |
Preference number: 4 (lower is better) Translates to: QIQLDPFLATRDRLNLENYLISA*GIKCID Trigger: GTCAATGCATTTTATTCCTCAGGCCGAAATCAGATA...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTCTGTACAAGGTTTTTaGTTTCTGCACTGCTACTAT | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILSVQGF*FLHCYY Trigger: ATAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR GCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATTTTAGAATTCAGTTGTaGAATGGATTTCTCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYFRIQL*NGFLSC Trigger: ACAGCTGAGAAATCCATTGCACAACTGAATTCTAAA...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR GCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATAATCCACATATGCTGTaGAAGCCTCTTTATATATTC | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYNPHML*KPLYIF Trigger: GAATATATAAAGAGGCTTGCACAGCATATGTGGATT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGATCGCTGTTTCTTCTTTaGCTTTGGAGCATTGATATC | + |
Preference number: 4 (lower is better) Translates to: SLNPRLITYLLGRAFESGSLFLL*LWSIDI Trigger: GATATCAATGCTCCAAAGCCAAAGAAGAAACAGCGA...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR CCA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGCTATGTCTTCAGTTTTaGGTTCTTGAAGGACATCTT | + |
Preference number: 4 (lower is better) Translates to: SALSVNTVLYRQHESCSLLCLQF*VLEGHL Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGACATAG...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CCA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATATTTCCAAAGAGAGCTaGTTTTCATCAATAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYISKES*FSSIGK Trigger: TTTGCCTATTGATGAAAACCAGCTCTCTTTGGAAAT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CCA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCAGTTGTTCTGCAGCTTaGCCAATGTCATTTTGTTAT | + |
Preference number: 4 (lower is better) Translates to: KNLNITKVGEIGEPFQILSCSAA*PMSFCY Trigger: ATAACAAAATGACATTGGCCAAGCTGCAGAACAACT...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
3UTR CAA 72 bp | TTGCTGTTGAGGCAATATCTCATTGGAGAACCAGTCTaGCTTAAAACACTATATGTTCCAAGTTGCCTTTCA | + |
Preference number: 4 (lower is better) Translates to: LLLRQYLIGEPV*LKTLYVPSCLS Trigger: TGAAAGGCAACTTGGAACATATAGTGTTTTAAGCAAGACTGGTTCTCCAATGAGATATTGCCTCAACAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | GCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTAATCCACATATGCTGTaGAAGCCTCTTTATATATTC | + |
Preference number: 4 (lower is better) Translates to: ALSVNTVLYRQHESCSLCNPHML*KPLYIF Trigger: GAATATATAAAGAGGCTTGCACAGCATATGTGGATT...ACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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3UTR CAA 72 bp | ACCACACTACTCCATGAACATTGCAGTAATACATACTaGATTCTATGTTTTGGGGGATCCACAATGTTCTTA | + |
Preference number: 4 (lower is better) Translates to: TTLLHEHCSNTY*ILCFGGSTMFL Trigger: TAAGAACATTGTGGATCCCCCAAAACATAGAATCAAGTATGTATTACTGCAATGTTCATGGAGTAGTGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR GCA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATTTTTGCTTTCTGCACTaGTACTATGTCTTCAGTTTT | + |
Preference number: 4 (lower is better) Translates to: QIQLDPFLATRDRLNLENFCFLH*YYVFSF Trigger: AAAACTGAAGACATAGTAGCAGTGCAGAAAGCAAAA...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR CCA 90 bp | AGCCTAAACCCAAGGTTAATAACATATCTACTAGGTAGAGCCTTTGAATCTGGAATTTCCAAAGAGAGCTaGTTTTCATCAATAGGCAAA | + |
Preference number: 4 (lower is better) Translates to: SLNPRLITYLLGRAFESGISKES*FSSIGK Trigger: TTTGCCTATTGATGAAAACCAGCTCTCTTTGGAAAT...TCCAGATTCAAAGGCTCTACCTAGTAGATATGTTATTAACCTTGGGTTTAGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
3UTR CAA 72 bp | TTGTTTCATACTCTGGTTTATTATAGGGGATTATATTaGATTTGTAGCCATTTCCCCCATTTCCTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: LFHTLVYYRGLY*ICSHFPHFLPS Trigger: AGATGGCAGGAAATGGGGGAAATGGCTACAAATCAAATATAATCCCCTATAATAAACCAGAGTATGAAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
||
CDS-3UTR CAA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTCCTCCACAAGCATACTaGAAGAAGTCTGTACATGGC | + |
Preference number: 5 (lower is better) Translates to: AEGQICALVPCCTEHRPPPPQAY*KKSVHG Trigger: GCCATGTACAGACTTCTTCAAGTATGCTTGTGGAGG...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CAA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTCTGAATGACTTCCCATaGACCTCCAGGGAAAAGTTG | + |
Preference number: 5 (lower is better) Translates to: AEGQICALVPCCTEHRPPLNDFP*TSREKL Trigger: CAACTTTTCCCTGGAGGTCAATGGGAAGTCATTCAG...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CAA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCGTCTCGGGAATGACGTaGCGTTTCAACCAGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGVSGMT*RFNQPP Trigger: TGGAGGCTGGTTGAAACGCAACGTCATTCCCGAGAC...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
||
CDS-3UTR CAA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTATATCTGGTAACAGTTaGAGTAGAGGTTGTCCGCCT | + |
Preference number: 5 (lower is better) Translates to: AEGQICALVPCCTEHRPPISGNS*SRGCPP Trigger: AGGCGGACAACCTCTACTCAAACTGTTACCAGATAT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTAGTGTATTAATTCCATaGAGATGCTGTCCACCTGCT | + |
Preference number: 5 (lower is better) Translates to: AEGQICALVPCCTEHRPPSVLIP*RCCPPA Trigger: AGCAGGTGGACAGCATCTCAATGGAATTAATACACT...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | GGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCCTCCACAAGCATACTaGAAGAAGTCTGTACATGGC | + |
Preference number: 5 (lower is better) Translates to: GQICALVPCCTEHRPPFDPPQAY*KKSVHG Trigger: GCCATGTACAGACTTCTTCAAGTATGCTTGTGGAGG...ATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAACCTCCAGGGAAAAGTaGTTCTGCAGCTTGGCCAAT | + |
Preference number: 5 (lower is better) Translates to: CALVPCCTEHRPPFDQKSTSREK*FCSLAN Trigger: ATTGGCCAAGCTGCAGAACAACTTTTCCCTGGAGGT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGGTCTCGGGAATGACGTaGCGTTTCAACCAGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: FSTDNMKAAVCVRNRSERVSGMT*RFNQPP Trigger: TGGAGGCTGGTTGAAACGCAACGTCATTCCCGAGAC...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCCTGAATGACTTCCCATaGACCTCCAGGGAAAAGTTG | + |
Preference number: 5 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGLNDFP*TSREKL Trigger: CAACTTTTCCCTGGAGGTCAATGGGAAGTCATTCAG...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | GCTGAGGGGCAAATCTGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTCTCTGGGAGAATATTaGGTAAGAATAGGCTTAAGT | + |
Preference number: 5 (lower is better) Translates to: AEGQICALVPCCTEHRPPSLGEY*VRIGLS Trigger: ACTTAAGCCTATTCTTACCAAATATTCTCCCAGAGA...AGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACAGATTTGCCCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAATATCTGGTAACAGTTaGAGTAGAGGTTGTCCGCCT | + |
Preference number: 5 (lower is better) Translates to: CALVPCCTEHRPPFDQKSISGNS*SRGCPP Trigger: AGGCGGACAACCTCTACTCAAACTGTTACCAGATAT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCATATCTGGTAACAGTTaGAGTAGAGGTTGTCCGCCT | + |
Preference number: 5 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGISGNS*SRGCPP Trigger: AGGCGGACAACCTCTACTCAAACTGTTACCAGATAT...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | GAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTTTGGAAGGAGCATGAATCTGAATGACTTCCCATaGACCTCCAGGGAAAAGTTG | + |
Preference number: 5 (lower is better) Translates to: EGHSLYGSSLGEFGRSMNLNDFP*TSREKL Trigger: CAACTTTTCCCTGGAGGTCAATGGGAAGTCATTCAG...ATTCATGCTCCTTCCAAACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTCTTCAGCTTTCTTTTTaGTCTCAGCATCCATCCAAG | + |
Preference number: 5 (lower is better) Translates to: QNCTSLKATVCMGVLWESLQLSF*SQHPSK Trigger: CTTGGATGGATGCTGAGACAAAAAAGAAAGCTGAAG...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | CAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATGGGAGTTCTTTGGGAGAGTAGTGTATTAATTCCATaGAGATGCTGTCCACCTGCT | + |
Preference number: 5 (lower is better) Translates to: QNCTSLKATVCMGVLWESSVLIP*RCCPPA Trigger: AGCAGGTGGACAGCATCTCAATGGAATTAATACACT...ACTCTCCCAAAGAACTCCCATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | AGAATTCAAGAAGCAGGTACAGTGGAGGCTGCCCATCTCGATTCAGACATAGGCATAGGCTCTGTATGCTaGGCCAATACCTCCATTATC | + |
Preference number: 5 (lower is better) Translates to: RIQEAGTVEAAHLDSDIGIGSVC*ANTSII Trigger: GATAATGGAGGTATTGGCCAAGCATACAGAGCCTAT...GCCTATGTCTGAATCGAGATGGGCAGCCTCCACTGTACCTGCTTCTTGAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAATAGGCTCTGTATGCTaGGCCAATACCTCCATTATC | + |
Preference number: 5 (lower is better) Translates to: CALVPCCTEHRPPFDQKSIGSVC*ANTSII Trigger: GATAATGGAGGTATTGGCCAAGCATACAGAGCCTAT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGACCTCCAGGGAAAAGTaGTTCTGCAGCTTGGCCAAT | + |
Preference number: 5 (lower is better) Translates to: FSTDNMKAAVCVRNRSERTSREK*FCSLAN Trigger: ATTGGCCAAGCTGCAGAACAACTTTTCCCTGGAGGT...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 90 bp | ACCCGACATTTCCTTTCTGGATTCATGTATGAATTCTTGCGGCAATaGAAGGCATCTGCAAACTCGGCAGAGTTCTGCAAAGTCCCAATG | + |
Preference number: 5 (lower is better) Translates to: TRHFLSGFMYEFLRQ*KASANSAEFCKVPM Trigger: CATTGGGACTTTGCAGAACTCTGCCGAGTTTGCAGATGCCTTTCATTGCCGCAAGAATTCATACATGAATCCAGAAAGGAAATGTCGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAATCTGTACAAGGTTTTaGCTTTCTGCACTGCTACTA | + |
Preference number: 5 (lower is better) Translates to: CALVPCCTEHRPPFDQKSICTRF*LSALLL Trigger: TAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGAT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CAA 90 bp | TGTGCTTTGGTGCCCTGCTGTACTGAGCATCGTCCTCCTTTTGATCAGAAGTCAATCAATAGGCAAACTTaGTTCCTGACGAATCAGTCT | + |
Preference number: 5 (lower is better) Translates to: CALVPCCTEHRPPFDQKSINRQT*FLTNQS Trigger: AGACTGATTCGTCAGGAACAAAGTTTGCCTATTGAT...TGACTTCTGATCAAAAGGAGGACGATGCTCAGTACAGCAGGGCACCAAAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CAA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATACCTCCAGGGAAAAGTaGTTCTGCAGCTTGGCCAAT | + |
Preference number: 5 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYTSREK*FCSLAN Trigger: ATTGGCCAAGCTGCAGAACAACTTTTCCCTGGAGGT...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
||
CDS-3UTR CAA 90 bp | TGTGCCCAAGGTCACTTTGGCAGTAGAACTAGAACAAATCCTCAACTTCCTGGGCTTCAGCTTTCTTTTTaGTCTCAGCATCCATCCAAG | + |
Preference number: 5 (lower is better) Translates to: CAQGHFGSRTRTNPQLPGLQLSF*SQHPSK Trigger: CTTGGATGGATGCTGAGACAAAAAAGAAAGCTGAAG...CCCAGGAAGTTGAGGATTTGTTCTAGTTCTACTGCCAAAGTGACCTTGGGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS TCA 90 bp | CAGCGGGGAAGACTATCTGATTTCGGCCTGAGGAATAAAATGCATTaGCTACAGCTGCTCCACTTATCCACTCATCTTTGTCCACTTTTT | + |
Preference number: 5 (lower is better) Translates to: QRGRLSDFGLRNKMH*LQLLHLSTHLCPLF Trigger: AAAAAGTGGACAAAGATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCATTTTATTCCTCAGGCCGAAATCAGATAGTCTTCCCCGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 90 bp | CCAAGTAAGGTCATCCAAAGTCTGAATAAAAACTTCCCGGATTTGTaGAATCAAGTCTTCAACCACGTGCTTGCTCTCTCCAGCAAAAGC | + |
Preference number: 5 (lower is better) Translates to: PSKVIQSLNKNFPDL*NQVFNHVLALSSKS Trigger: GCTTTTGCTGGAGAGAGCAAGCACGTGGTTGAAGACTTGATTGCACAAATCCGGGAAGTTTTTATTCAGACTTTGGATGACCTTACTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGACCTCCACAAGCATACTaGAAGAAGTCTGTACATGGC | + |
Preference number: 5 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRPPQAY*KKSVHG Trigger: GCCATGTACAGACTTCTTCAAGTATGCTTGTGGAGG...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS GCA 90 bp | GAATCAGTCGAGCAGCTGATTTTATGCAGTCTGATGATTTGCAAATaGCATCATCATAGGTTGCATAGAGAGCGATCATTGTCACCGCTA | + |
Preference number: 5 (lower is better) Translates to: ESVEQLILCSLMICK*HHHRLHRERSLSPL Trigger: TAGCGGTGACAATGATCGCTCTCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGCTGCTCGACTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS-3UTR CAA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATCTTATCCACTCATCTTaGTCCACTTTTTCTCGGAGC | + |
Preference number: 5 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYLIHSS*STFSRS Trigger: GCTCCGAGAAAAAGTGGACAAAGATGAGTGGATAAG...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCTCTGTTTTAATAGAATaGACTGCATACTCTGGCCGG | + |
Preference number: 5 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTSVLIE*TAYSGR Trigger: CCGGCCAGAGTATGCAGTCAATTCTATTAAAACAGA...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | TTCTCTACAGACAACATGAAAGCTGCAGTCTGTGTGAGAAACAGAAGTGAACGGTCTGTTTTAATAGAATaGACTGCATACTCTGGCCGG | + |
Preference number: 5 (lower is better) Translates to: FSTDNMKAAVCVRNRSERSVLIE*TAYSGR Trigger: CCGGCCAGAGTATGCAGTCAATTCTATTAAAACAGA...CCGTTCACTTCTGTTTCTCACACAGACTGCAGCTTTCATGTTGTCTGTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 90 bp | GTCCCACACCACACCTGGGCAAAGTTCAGGAAAAATAGTTGTTTGTaGTTGAGGTCAAGTCCAGGGAGTAATTTTTCTTCACCATTCTTT | + |
Preference number: 5 (lower is better) Translates to: VPHHTWAKFRKNSCL*LRSSPGSNFSSPFF Trigger: AAAGAATGGTGAAGAAAAATTACTCCCTGGACTTGACCTCAATCACAAACAACTATTTTTCCTGAACTTTGCCCAGGTGTGGTGTGGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCATCAATAGGCAAACTTaGTTCCTGACGAATCAGTCT | + |
Preference number: 5 (lower is better) Translates to: LAHLHFQCYTKSPPYPPTINRQT*FLTNQS Trigger: AGACTGATTCGTCAGGAACAAAGTTTGCCTATTGAT...GGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATCTTCAGCTTTCTTTTTaGTCTCAGCATCCATCCAAG | + |
Preference number: 5 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYLQLSF*SQHPSK Trigger: CTTGGATGGATGCTGAGACAAAAAAGAAAGCTGAAG...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGCTTATCCACTCATCTTaGTCCACTTTTTCTCGGAGC | + |
Preference number: 5 (lower is better) Translates to: SALSVNTVLYRQHESCSLLIHSS*STFSRS Trigger: GCTCCGAGAAAAAGTGGACAAAGATGAGTGGATAAG...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGATAGGCTCTGTATGCTaGGCCAATACCTCCATTATC | + |
Preference number: 5 (lower is better) Translates to: SALSVNTVLYRQHESCSLIGSVC*ANTSII Trigger: GATAATGGAGGTATTGGCCAAGCATACAGAGCCTAT...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | ATGTATGGTAAAATGAGTTCAAAACTGCACGAGCCTGAAGGCCACAGTCTGTATTCTGTTTTAATAGAATaGACTGCATACTCTGGCCGG | + |
Preference number: 5 (lower is better) Translates to: MYGKMSSKLHEPEGHSLYSVLIE*TAYSGR Trigger: CCGGCCAGAGTATGCAGTCAATTCTATTAAAACAGA...ATACAGACTGTGGCCTTCAGGCTCGTGCAGTTTTGAACTCATTTTACCATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 90 bp | TACTTGAAGAAGTCTGTACATGGCTCAACAGAGGCATCCATATTCTaGATCAGTCGAGCAGCTGATTTTATGCAGTCTGATGATTTGCAA | + |
Preference number: 5 (lower is better) Translates to: YLKKSVHGSTEASIF*ISRAADFMQSDDLQ Trigger: TTGCAAATCATCAGACTGCATAAAATCAGCTGCTCGACTGATTCAGAATATGGATGCCTCTGTTGAGCCATGTACAGACTTCTTCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS GCA 90 bp | GTTCTTGAAGGACATCTGATTTTATGCAGTCTGATGATTTGCAAATaGCATCATCATAGGTTGCATAGAGAGCGATCATTGTCACCGCTA | + |
Preference number: 5 (lower is better) Translates to: VLEGHLILCSLMICK*HHHRLHRERSLSPL Trigger: TAGCGGTGACAATGATCGCTCTCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGATGTCCTTCAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191633.6 |
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CDS CCA 90 bp | GTTGTTCTGCAGCTTGGCCAATGTCATTTTGTTATAAAGCAGCATTaGGTCATTTCGGTCTTCTGGTTTAGTTGTAGCATTGGCAATTTC | + |
Preference number: 5 (lower is better) Translates to: VVLQLGQCHFVIKQH*VISVFWFSCSIGNF Trigger: GAAATTGCCAATGCTACAACTAAACCAGAAGACCGAAATGACCCAATGCTGCTTTATAACAAAATGACATTGGCCAAGCTGCAGAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGAGTGTATTAATTCCATaGAGATGCTGTCCACCTGCT | + |
Preference number: 5 (lower is better) Translates to: SALSVNTVLYRQHESCSLSVLIP*RCCPPA Trigger: AGCAGGTGGACAGCATCTCAATGGAATTAATACACT...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 90 bp | TATTCTGAATCAGTCGAGCAGCTGATTTTATGCAGTCTGATGATTTaGAAATGCCATCATCATAGGTTGCATAGAGAGCGATCATTGTCA | + |
Preference number: 5 (lower is better) Translates to: YSESVEQLILCSLMI*KCHHHRLHRERSLS Trigger: TGACAATGATCGCTCTCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGCTGCTCGACTGATTCAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS-3UTR CAA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCATCTGTACAAGGTTTTaGCTTTCTGCACTGCTACTA | + |
Preference number: 5 (lower is better) Translates to: KNLNITKVGEIGEPFQILICTRF*LSALLL Trigger: TAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGAT...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | TCTGCTTTAAGTGTTAACACTGTTCTCTACAGACAACATGAAAGCTGCAGTCTGATCAATAGGCAAACTTaGTTCCTGACGAATCAGTCT | + |
Preference number: 5 (lower is better) Translates to: SALSVNTVLYRQHESCSLINRQT*FLTNQS Trigger: AGACTGATTCGTCAGGAACAAAGTTTGCCTATTGAT...CAGACTGCAGCTTTCATGTTGTCTGTAGAGAACAGTGTTAACACTTAAAGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS-3UTR CAA 90 bp | CTGATGACAAACCTGAAGGCTAAGCATTCATGGAGCAACACAGATACAGTTAGATCTCTGGGAGAATATTaGGTAAGAATAGGCTTAAGT | + |
Preference number: 5 (lower is better) Translates to: LMTNLKAKHSWSNTDTVRSLGEY*VRIGLS Trigger: ACTTAAGCCTATTCTTACCAAATATTCTCCCAGAGA...TCTAACTGTATCTGTGTTGCTCCATGAATGCTTAGCCTTCAGGTTTGTCATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS TCA 90 bp | ATTTCCAAAGAGAGCTGGTTTTCATCAATAGGCAAACTTTGTTCCTaGCGAATCAGTCTGGCCACAGAAATCATAAAATCCACATATGCT | + |
Preference number: 5 (lower is better) Translates to: ISKESWFSSIGKLCS*RISLATEIIKSTYA Trigger: AGCATATGTGGATTTTATGATTTCTGTGGCCAGACTGATTCGTCAGGAACAAAGTTTGCCTATTGATGAAAACCAGCTCTCTTTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 90 bp | GCTATCAATAGCAGACTCATTTATACACGATCTGTACAAGGTTTTTaGTTTCTGCACTGCTACTATGTCTTCAGTTTTGGGTTCTTGAAG | + |
Preference number: 5 (lower is better) Translates to: AINSRLIYTRSVQGF*FLHCYYVFSFGFLK Trigger: CTTCAAGAACCCAAAACTGAAGACATAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGATCGTGTATAAATGAGTCTGCTATTGATAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000191633.6 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194836.6 |
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CDS-3UTR CAA 90 bp | CAGATACAGTTAGACCCTTTCTTAGCCACTAGGGACAGACTTAATCTTGAAAATATCTGTACAAGGTTTTaGCTTTCTGCACTGCTACTA | + |
Preference number: 5 (lower is better) Translates to: QIQLDPFLATRDRLNLENICTRF*LSALLL Trigger: TAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGAT...ATTTTCAAGATTAAGTCTGTCCCTAGTGGCTAAGAAAGGGTCTAACTGTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 |
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CDS-3UTR CAA 90 bp | AAGAATCTCAACATCACTAAAGTGGGTGAAATAGGGGAACCGTTTCAGATACTCTCTCTGGGAGAATATTaGGTAAGAATAGGCTTAAGT | + |
Preference number: 5 (lower is better) Translates to: KNLNITKVGEIGEPFQILSLGEY*VRIGLS Trigger: ACTTAAGCCTATTCTTACCAAATATTCTCCCAGAGA...GAGTATCTGAAACGGTTCCCCTATTTCACCCACTTTAGTGATGTTGAGATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 90 bp | AGACTCATTTATACACGATCTGTACAAGGTTTTTGCTTTCTGCACTaGTACTATGTCTTCAGTTTTGGGTTCTTGAAGGACATCTTTCAA | + |
Preference number: 5 (lower is better) Translates to: RLIYTRSVQGFCFLH*YYVFSFGFLKDIFQ Trigger: TTGAAAGATGTCCTTCAAGAACCCAAAACTGAAGACATAGTAGCAGTGCAGAAAGCAAAAACCTTGTACAGATCGTGTATAAATGAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194836.6 |
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CDS GCA 90 bp | CTACTATGTCTTCAGTTTTGGGTTCTTGAAGGACATCTGATTTTATaGAGTCTGATGATTTGCAAATGCCATCATCATAGGTTGCATAGA | + |
Preference number: 5 (lower is better) Translates to: LLCLQFWVLEGHLIL*SLMICKCHHHRLHR Trigger: TCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGATGTCCTTCAAGAACCCAAAACTGAAGACATAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191633.6 |
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CDS GCA 72 bp | CCCGGATTTGTGCAATCAAGTCTTCAACCACGTGCTTaGTCTCTCCAGCAAAAGCCGCTTCCACATAAAGCC | + |
Preference number: 6 (lower is better) Translates to: PGFVQSSLQPRA*SLQQKPLPHKA Trigger: GGCTTTATGTGGAAGCGGCTTTTGCTGGAGAGAGCAAGCACGTGGTTGAAGACTTGATTGCACAAATCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | GACGTAGTTAGCACACCGTCTCCATGTTGCAGTTTCTaGTGTAGTCCCATAAAGGGCCTTGCGGAAAGCATT | + |
Preference number: 6 (lower is better) Translates to: DVVSTPSPCCSF*CSPIKGLAESI Trigger: AATGCTTTCCGCAAGGCCCTTTATGGGACTACATCAGAAACTGCAACATGGAGACGGTGTGCTAACTACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | TGTCAAAATTACTGTATCGGGAACTGGTCTCGGGAATaGCGTTGCGTTTCAACCAGCCTCCACAAGCATACT | + |
Preference number: 6 (lower is better) Translates to: CQNYCIGNWSRE*RCVSTSLHKHT Trigger: AGTATGCTTGTGGAGGCTGGTTGAAACGCAACGTCATTCCCGAGACCAGTTCCCGATACAGTAATTTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS GCA 72 bp | CCACATATGCTGTGCAAGCCTCTTTATATATTCCAGTaGACTCATAGTAGTCTCTGGAAGGGAGGCCAAGTC | + |
Preference number: 6 (lower is better) Translates to: PHMLCKPLYIFQ*THSSLWKGGQV Trigger: GACTTGGCCTCCCTTCCAGAGACTACTATGAGTGCACTGGAATATATAAAGAGGCTTGCACAGCATATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS CCA 72 bp | GCTGATCTCCAGGGGAGTCCATCGCTGTTTCTTCTTTaGCTTTGGAGCATTGATATCAGTTATATCCATCTG | + |
Preference number: 6 (lower is better) Translates to: ADLQGSPSLFLL*LWSIDISYIHL Trigger: CAGATGGATATAACTGATATCAATGCTCCAAAGCCAAAGAAGAAACAGCGATGGACTCCCCTGGAGATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029400.7 ENSMUST00000191633.6 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS CAA 72 bp | GATGCTACTGGCCACCCATATATATCTGGTAACAGTTaGAGTAGAGGTTGTCCGCCTCTGCTATCAATAGCA | + |
Preference number: 6 (lower is better) Translates to: DATGHPYISGNS*SRGCPPLLSIA Trigger: TGCTATTGATAGCAGAGGCGGACAACCTCTACTCAAACTGTTACCAGATATATATGGGTGGCCAGTAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000191633.6 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194836.6 |
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CDS TCA 72 bp | ATGGATTTCTCAGCTGTCCAAGAAGTGCCATATGTTTaGTCCCAGTTATCTGATGCTACTGGCCACCCATAT | + |
Preference number: 6 (lower is better) Translates to: MDFSAVQEVPYV*SQLSDATGHPY Trigger: ATATGGGTGGCCAGTAGCATCAGATAACTGGGATCAAACATATGGCACTTCTTGGACAGCTGAGAAATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | TCTCTGGAAGGGAGGCCAAGTCGAGGCTGGTCAAAATaGATTATATGCTGGGTAGAATTCTTATCATCAGTG | + |
Preference number: 6 (lower is better) Translates to: SLEGRPSRGWSK*IICWVEFLSSV Trigger: CACTGATGATAAGAATTCTACCCAGCATATAATTCATTTTGACCAGCCTCGACTTGGCCTCCCTTCCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS CCA 72 bp | CTCCAGGGGAGTCCATCGCTGTTTCTTCTTTGGCTTTaGAGCATTGATATCAGTTATATCCATCTGACTTTC | + |
Preference number: 6 (lower is better) Translates to: LQGSPSLFLLWL*SIDISYIHLTF Trigger: GAAAGTCAGATGGATATAACTGATATCAATGCTCCAAAGCCAAAGAAGAAACAGCGATGGACTCCCCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029400.7 ENSMUST00000191633.6 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS CAA 90 bp | AAAATGTCAAAATTACTGTATCGGGAACTGGTCTCGGGAATGACGTaGCGTTTCAACCAGCCTCCACAAGCATACTTGAAGAAGTCTGTA | + |
Preference number: 6 (lower is better) Translates to: KMSKLLYRELVSGMT*RFNQPPQAYLKKSV Trigger: TACAGACTTCTTCAAGTATGCTTGTGGAGGCTGGTTGAAACGCAACGTCATTCCCGAGACCAGTTCCCGATACAGTAATTTTGACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS CAA 90 bp | CAGTTATCTGATGCTACTGGCCACCCATATATATCTGGTAACAGTTaGAGTAGAGGTTGTCCGCCTCTGCTATCAATAGCAGACTCATTT | + |
Preference number: 6 (lower is better) Translates to: QLSDATGHPYISGNS*SRGCPPLLSIADSF Trigger: AAATGAGTCTGCTATTGATAGCAGAGGCGGACAACCTCTACTCAAACTGTTACCAGATATATATGGGTGGCCAGTAGCATCAGATAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000191633.6 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194836.6 |
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CDS CAA 90 bp | CATCCAAGTAAGGTCATCCAAAGTCTGAATAAAAACTTCCCGGATTaGTGCAATCAAGTCTTCAACCACGTGCTTGCTCTCTCCAGCAAA | + |
Preference number: 6 (lower is better) Translates to: HPSKVIQSLNKNFPD*CNQVFNHVLALSSK Trigger: TTTGCTGGAGAGAGCAAGCACGTGGTTGAAGACTTGATTGCACAAATCCGGGAAGTTTTTATTCAGACTTTGGATGACCTTACTTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | AAGTCTGTACATGGCTCAACAGAGGCATCCATATTCTaGATCAGTCGAGCAGCTGATTTTATGCAGTCTGAT | + |
Preference number: 6 (lower is better) Translates to: KSVHGSTEASIF*ISRAADFMQSD Trigger: ATCAGACTGCATAAAATCAGCTGCTCGACTGATTCAGAATATGGATGCCTCTGTTGAGCCATGTACAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS GCA 72 bp | TCAGTCGAGCAGCTGATTTTATGCAGTCTGATGATTTaGAAATGCCATCATCATAGGTTGCATAGAGAGCGA | + |
Preference number: 6 (lower is better) Translates to: SVEQLILCSLMI*KCHHHRLHRER Trigger: TCGCTCTCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGCTGCTCGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029400.7 ENSMUST00000192002.3 ENSMUST00000194134.6 ENSMUST00000194150.6 ENSMUST00000194324.6 ENSMUST00000194836.6 |
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CDS CAA 72 bp | AAGGTCATCCAAAGTCTGAATAAAAACTTCCCGGATTaGTGCAATCAAGTCTTCAACCACGTGCTTGCTCTC | + |
Preference number: 6 (lower is better) Translates to: KVIQSLNKNFPD*CNQVFNHVLAL Trigger: GAGAGCAAGCACGTGGTTGAAGACTTGATTGCACAAATCCGGGAAGTTTTTATTCAGACTTTGGATGACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | GAGAGCTGGTTTTCATCAATAGGCAAACTTTGTTCCTaGCGAATCAGTCTGGCCACAGAAATCATAAAATCC | + |
Preference number: 6 (lower is better) Translates to: ESWFSSIGKLCS*RISLATEIIKS Trigger: GGATTTTATGATTTCTGTGGCCAGACTGATTCGTCAGGAACAAAGTTTGCCTATTGATGAAAACCAGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS TCA 72 bp | GTCTCAGCATCCATCCAAGTAAGGTCATCCAAAGTCTaGATAAAAACTTCCCGGATTTGTGCAATCAAGTCT | + |
Preference number: 6 (lower is better) Translates to: VSASIQVRSSKV*IKTSRICAIKS Trigger: AGACTTGATTGCACAAATCCGGGAAGTTTTTATTCAGACTTTGGATGACCTTACTTGGATGGATGCTGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS CAA 72 bp | TTCCAAAGAGAGCTGGTTTTCATCAATAGGCAAACTTaGTTCCTGACGAATCAGTCTGGCCACAGAAATCAT | + |
Preference number: 6 (lower is better) Translates to: FQRELVFINRQT*FLTNQSGHRNH Trigger: ATGATTTCTGTGGCCAGACTGATTCGTCAGGAACAAAGTTTGCCTATTGATGAAAACCAGCTCTCTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 72 bp | CTTGAAGGACATCTGATTTTATGCAGTCTGATGATTTaGAAATGCCATCATCATAGGTTGCATAGAGAGCGA | + |
Preference number: 6 (lower is better) Translates to: LEGHLILCSLMI*KCHHHRLHRER Trigger: TCGCTCTCTATGCAACCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGATGTCCTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191633.6 |
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CDS CCA 72 bp | CAGCTTGGCCAATGTCATTTTGTTATAAAGCAGCATTaGGTCATTTCGGTCTTCTGGTTTAGTTGTAGCATT | + |
Preference number: 6 (lower is better) Translates to: QLGQCHFVIKQH*VISVFWFSCSI Trigger: AATGCTACAACTAAACCAGAAGACCGAAATGACCCAATGCTGCTTTATAACAAAATGACATTGGCCAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |
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CDS GCA 72 bp | CTTCAGTTTTGGGTTCTTGAAGGACATCTGATTTTATaGAGTCTGATGATTTGCAAATGCCATCATCATAGG | + |
Preference number: 6 (lower is better) Translates to: LQFWVLEGHLIL*SLMICKCHHHR Trigger: CCTATGATGATGGCATTTGCAAATCATCAGACTGCATAAAATCAGATGTCCTTCAAGAACCCAAAACTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191633.6 |
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CDS CAA 90 bp | TTTATTCATTTCCAAAGAGAGCTGGTTTTCATCAATAGGCAAACTTaGTTCCTGACGAATCAGTCTGGCCACAGAAATCATAAAATCCAC | + |
Preference number: 6 (lower is better) Translates to: FIHFQRELVFINRQT*FLTNQSGHRNHKIH Trigger: GTGGATTTTATGATTTCTGTGGCCAGACTGATTCGTCAGGAACAAAGTTTGCCTATTGATGAAAACCAGCTCTCTTTGGAAATGAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029400.7 ENSMUST00000194134.6 ENSMUST00000194150.6 |