Pregenerated sensors for MMD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039533Ensembl transcript IDs: ENSMUST00000037048.9
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCCACCCATTCTGATAGAGGAAGACCCTGCTCCTAGGGCCATCTaGGGGGCCTCCGAGAGCCGTTTCCTGACACTGAGGAAAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: IPPILIEEDPAPRAI*GASESRFLTLRKSP Trigger: GGGGCTTTTCCTCAGTGTCAGGAAACGGCTCTCGGAGGCCCCTCAGATGGCCCTAGGAGCAGGGTCTTCCTCTATCAGAATGGGTGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 90 bp | AGAGCTCAGCAGAGGCCATGTGATCTCTTTGAAGTGCCAAGCCAGTaGCTTAGGCTCCATCACTGTTGCTGGGAACCTCCCTGGTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: RAQQRPCDLFEVPSQ*LRLHHCCWEPPWSP Trigger: TGGGGACCAGGGAGGTTCCCAGCAACAGTGATGGAGCCTAAGTCACTGGCTTGGCACTTCAAAGAGATCACATGGCCTCTGCTGAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 90 bp | GACTTAGGCTCCATCACTGTTGCTGGGAACCTCCCTGGTCCCCATTaGCATCCTAACAGCAGATGCTTTTCTTGGTCTGGACTGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: DLGSITVAGNLPGPH*HPNSRCFSWSGLHH Trigger: GTGGTGCAGTCCAGACCAAGAAAAGCATCTGCTGTTAGGATGCCAATGGGGACCAGGGAGGTTCCCAGCAACAGTGATGGAGCCTAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 90 bp | ATAAGGCACCCTGTCTTGGCACACCCTTGCCCACACCCATCTGGCTaGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: IRHPVLAHPCPHPSG*QLLNKTLDFQQTLA Trigger: TGCAAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGGCAAGGGTGTGCCAAGACAGGGTGCCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR GCA 90 bp | GATCTCCTGAAAAGGGAATTAGAAACGGTTATGAGCTGCCATGGGTaGTGGGAATCAAACCCGGGTCCTCTGGAAGAGCAGGAAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: DLLKRELETVMSCHG*WESNPGPLEEQEVL Trigger: AAGCACTTCCTGCTCTTCCAGAGGACCCGGGTTTGATTCCCAGCACCCATGGCAGCTCATAACCGTTTCTAATTCCCTTTTCAGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR GCA 90 bp | GAGTGTCAGGACCTGTTTGGAATGTATGCCTTGGTCTCCCTGCACTaGCTCCAAAGAGCTCACTTAAAGAACTTCCTCAAATATGGACAG | + |
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Preference number: 1 (lower is better) Translates to: ECQDLFGMYALVSLH*LQRAHLKNFLKYGQ Trigger: CTGTCCATATTTGAGGAAGTTCTTTAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 90 bp | CTAAGGACAATTCAAATAAATGCCCAGCCCAAAGTCACAAAGAAATaGAGCTGTTCAACTCAAGAGCTCAGCAGAGGCCATGTGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: LRTIQINAQPKVTKK*SCSTQELSRGHVIS Trigger: AGAGATCACATGGCCTCTGCTGAGCTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTTGGGCTGGGCATTTATTTGAATTGTCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 90 bp | AGGGATATTCCCCATAGATCATCTATAATGCTAATCACTTTCTCCTaGAGCAGAAAGGGAGGCCCTCAGAACTTTAAAAATTACCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RDIPHRSSIMLITFS*SRKGGPQNFKNYLL Trigger: CAGAAGGTAATTTTTAAAGTTCTGAGGGCCTCCCTTTCTGCTTCAGGAGAAAGTGATTAGCATTATAGATGATCTATGGGGAATATCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCCCAGATGCATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATCTCCATCACTGTTGCTaGGAACCTCCCTGGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LCPRCMPGTRRGQKRVSDLHHCC*EPPWSP Trigger: TGGGGACCAGGGAGGTTCCCAGCAACAGTGATGGAG...ATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATGCATCTGGGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAACCTCCCTGGTCCCCATTGGCATCCTAACAGCAGATGCTTTTCTTGGTAGGAATAGAGGTGGCTaGGGACAGGCCCCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LGTSLVPIGILTADAFLGRNRGG*GQAPGS Trigger: GCTCCCAGGGGCCTGTCCTCAGCCACCTCTATTCCT...ACCAAGAAAAGCATCTGCTGTTAGGATGCCAATGGGGACCAGGGAGGTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCCCAGATGCATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATTTGGAATGTATGCCTTaGTCTCCCTGCACTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LCPRCMPGTRRGQKRVSDLECMP*SPCTAS Trigger: GGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAA...ATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATGCATCTGGGGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATCTCCTGAAAAGGGAGAAAAGCCCCTCTGGTaGACACAGCATCCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HAWHPQRPKEGVRSPEKGEKPLW*TQHPFS Trigger: GGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTC...TCCCTTTTCAGGAGATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | AAATGCCCAGCCCAAAGTCACAAAGAAATGGAGCTGTTCAACTCAAGAGCTCAGGCTCCTAGGGCCATCTaGGGGGCCTCCGAGAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: KCPAQSHKEMELFNSRAQAPRAI*GASESR Trigger: ACGGCTCTCGGAGGCCCCTCAGATGGCCCTAGGAGC...CTGAGCTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTTGGGCTGGGCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CAA 90 bp | AGCTGGGGACACCTGCCACAGAGAGCAGGGGCCTGGCCTAAATCCTaGCCAATGGGAAAGGCCAGATTTGATGCCAGATCTAGCAAGATA | + |
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Preference number: 2 (lower is better) Translates to: SWGHLPQRAGAWPKS*PMGKARFDARSSKI Trigger: TATCTTGCTAGATCTGGCATCAAATCTGGCCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTGGCAGGTGTCCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGTCTGAGATGTCAGTTCAGGTCAGGAGCCAGGCCAGCTGCTCAATACTCATGCCTTGGTCTCCCTaGACTGCCTCCAAAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RESEMSVQVRSQASCSILMPWSP*TASKEL Trigger: GAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCAT...GAGTATTGAGCAGCTGGCCTGGCTCCTGACCTGAACTGACATCTCAGACTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CAA 90 bp | AGGCCCCTGGGAGCCATGCTCTTAGCTGACAGGTCACTTCAGAGGTaGAGGGATGAAGATATTCCACCCATTCTGATAGAGGAAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: RPLGAMLLADRSLQR*RDEDIPPILIEEDP Trigger: AGGGTCTTCCTCTATCAGAATGGGTGGAATATCTTCATCCCTCAACCTCTGAAGTGACCTGTCAGCTAAGAGCATGGCTCCCAGGGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGGAATCAAACCCGGGTCCTCTGGAAGAGCAGGAAGTGCTTTTAACTGCTCTAATCACTTTCTCCTaGAGCAGAAAGGGAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: CWESNPGPLEEQEVLLTALITFS*SRKGGP Trigger: AGGGCCTCCCTTTCTGCTTCAGGAGAAAGTGATTAG...AGCAGTTAAAAGCACTTCCTGCTCTTCCAGAGGACCCGGGTTTGATTCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACGGTCACTTCAGAGGTTaGGGGATGAAGATATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PTPIWLAVVEQDLGFPADGHFRG*GMKIFH Trigger: GTGGAATATCTTCATCCCTCAACCTCTGAAGTGACC...GTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR GCA 90 bp | AAATGCCCAGCCCAAAGTCACAAAGAAATGGAGCTGTTCAACTCAAGAGCTCAGAGGCTCCATCACTGTTaGTGGGAACCTCCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: KCPAQSHKEMELFNSRAQRLHHC*WEPPWS Trigger: GGACCAGGGAGGTTCCCAGCAACAGTGATGGAGCCT...CTGAGCTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTTGGGCTGGGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTTTGCCGTCACGTATGTCTGTGCCCCAGATGCATGCCTGGCACCCGCAGGACAATTCAAATAAATaGCCAGCCCAAAGTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: SALPSRMSVPQMHAWHPQDNSNK*PAQSHK Trigger: TTTGTGACTTTGGGCTGGGCATTTATTTGAATTGTC...CTGCGGGTGCCAGGCATGCATCTGGGGCACAGACATACGTGACGGCAAAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CAA 90 bp | AACCATGGCGGAACAGAGTGTCAGGACCTGTTTGGAATGTATGCCTaGGTCTCCCTGCACTGCCTCCAAAGAGCTCACTTAAAGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: NHGGTECQDLFGMYA*VSLHCLQRAHLKNF Trigger: GAAGTTCTTTAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTCTGTTCCGCCATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGAATGCACTAGAACAAAGTATAAGGCACCCTGTCTTGGCACACCCTTGCCTGGCTGGCAGTTGTTaGACAAGACCTTGGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: PWNALEQSIRHPVLAHPCLAGSC*TRPWIS Trigger: GGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAG...GCAAGGGTGTGCCAAGACAGGGTGCCTTATACTTTGTTCTAGTGCATTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGGAATGCACTAGAACAAAGTATAAGGCACCCTGTCTTGGCACACCCTTGCCACACCCATCTGGCTaGCAGTTGTTGAACAAGACC | + |
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Preference number: 2 (lower is better) Translates to: TLECTRTKYKAPCLGTPLPHPSG*QLLNKT Trigger: GGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGG...CAAGGGTGTGCCAAGACAGGGTGCCTTATACTTTGTTCTAGTGCATTCCAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAACACACCAGGCCAGCCAAAAGGTTCCATCATGAGCACAGAATCAATTAGTGCTGCAATTGATTGGTaGTGCCTACCATGGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PNTPGQPKGSIMSTESISAAIDW*CLPWSG Trigger: CCCTGACCATGGTAGGCATCACCAATCAATTGCAGC...ACTAATTGATTCTGTGCTCATGATGGAACCTTTTGGCTGGCCTGGTGTGTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGATCCTGTCTCCTAACACACCAGGCCAGCCAAAAGGTTCCATCATGAGCAAATTACCTTCTGGATaGTCATTCCCTGTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SVILSPNTPGQPKGSIMSKLPSG*SFPVWP Trigger: GGGCCAAACAGGGAATGACCATCCAGAAGGTAATTT...GCTCATGATGGAACCTTTTGGCTGGCCTGGTGTGTTAGGAGACAGGATCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATCTTCCCATGTTGCTTTaGTCCCAAAGTCCAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: FLTLRKSPSGEHSILSPDLPMLL*SQSPND Trigger: GTCATTTGGACTTTGGGATCAAAGCAACATGGGAAG...ATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGTCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACCTAATAGTTATTCTGTaGTCCTGTCTCCTAACACAC | + |
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Preference number: 2 (lower is better) Translates to: PTPIWLAVVEQDLGFPADLIVIL*SCLLTH Trigger: GTGTGTTAGGAGACAGGATCACAGAATAACTATTAG...GTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAACCTCCCTGGTCCCCATTGGCATCCTAACAGCAGATGCTTTTCTTGGTAATTCTACTGCTACATaGGTGCTGCAATTGATTGGT | + |
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Preference number: 2 (lower is better) Translates to: LGTSLVPIGILTADAFLGNSTAT*VLQLIG Trigger: ACCAATCAATTGCAGCACGCATGTAGCAGTAGAATT...ACCAAGAAAAGCATCTGCTGTTAGGATGCCAATGGGGACCAGGGAGGTTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAGTTATGAGGGTCCCATCCCAGTCAGCAGCCACCACTCTCCAATATGGTTAGTAATGTCTGCATaGGACACTATGTTGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: EASYEGPIPVSSHHSPIWLVMSA*DTMLNS Trigger: AGAATTCAACATAGTGTCCCATGCAGACATTACTAA...CCATATTGGAGAGTGGTGGCTGCTGACTGGGATGGGACCCTCATAACTGGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGAATGCACTAGAACAAAGTATAAGGCACCCTGTCTTGGCACACCCTTGGGTTCCTTAGACCCATaGAGAATTCCATCCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TLECTRTKYKAPCLGTPLGSLDP*RIPSRK Trigger: TTTCCTGGATGGAATTCTTCATGGGTCTAAGGAACC...CAAGGGTGTGCCAAGACAGGGTGCCTTATACTTTGTTCTAGTGCATTCCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGGTATCAGCATCTTCATCCCAGATCTCAGCTCCTCTAGAACCAAGAGCTTAAAAATTACCTTCTaGATGGTCATTCCCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: WPGISIFIPDLSSSRTKSLKITF*MVIPCL Trigger: CAAACAGGGAATGACCATCCAGAAGGTAATTTTTAA...GCTCTTGGTTCTAGAGGAGCTGAGATCTGGGATGAAGATGCTGATACCTGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAATATTACAAAGTCCTCAGCGTGTATTTGGGCTTTGAAGGATGAAATGCTTTTCTTGGTCTaGACTGCACCACACCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SQTNITKSSACIWALKDEMLFLV*TAPHLG Trigger: CCCCAGGTGTGGTGCAGTCCAGACCAAGAAAAGCAT...TTCATCCTTCAAAGCCCAAATACACGCTGAGGACTTTGTAATATTTGTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAATATTACAAAGTCCTCAGCGTGTATTTGGGCTTTGAAGGATGAATACAGGGGAAATCCATaGGGCAGGGTTACCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SQTNITKSSACIWALKDEYRGNP*GRVTQD Trigger: ATCTTGGGTAACCCTGCCCCATGGATTTCCCCTGTA...TTCATCCTTCAAAGCCCAAATACACGCTGAGGACTTTGTAATATTTGTTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | TATTTCTTTATCTTTATTTGTGTGAGTGCTTTGCCGTCACGTATGTCTGTGCCCTGTTTTCTTCCTTGTTaGGGATTCAAAAGGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: YFFIFICVSALPSRMSVPCFLPC*GFKRWS Trigger: AGACCACCTTTTGAATCCCCAACAAGGAAGAAAACA...GGGCACAGACATACGTGACGGCAAAGCACTCACACAAATAAAGATAAAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAACAAATATTACAAAGTCCTCAGCGTGTATTTGGGCTTTGAAGGATGAAAAAGTCACAAAGAAATaGAGCTGTTCAACTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQTNITKSSACIWALKDEKVTKK*SCSTQE Trigger: CTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTT...TTCATCCTTCAAAGCCCAAATACACGCTGAGGACTTTGTAATATTTGTTTGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR GCA 72 bp | TGCTTTGCCGTCACGTATGTCTGTGCCCCAGATGCATaGCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: CFAVTYVCAPDA*LAPAEAKRGCQ Trigger: CTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATGCATCTGGGGCACAGACATACGTGACGGCAAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 72 bp | GGTCCCATCCCAGTCAGCAGCCACCACTCTCCAATATaGTCCTCTTCTCTGAACCCTGACCCCGAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GPIPVSSHHSPI*SSSLNPDPELE Trigger: CTCCAGCTCGGGGTCAGGGTTCAGAGAAGAGGACCATATTGGAGAGTGGTGGCTGCTGACTGGGATGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 72 bp | ATTCTGATAGAGGAAGACCCTGCTCCTAGGGCCATCTaGGGGGCCTCCGAGAGCCGTTTCCTGACACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: ILIEEDPAPRAI*GASESRFLTLR Trigger: CCTCAGTGTCAGGAAACGGCTCTCGGAGGCCCCTCAGATGGCCCTAGGAGCAGGGTCTTCCTCTATCAGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 72 bp | TCCAGGGGCAGCATATGTACCCGAGTGACAGGTACCTaGGTGACAGACAGGGCTCTGAGCTGTGGTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: SRGSICTRVTGT*VTDRALSCGAD Trigger: ATCAGCACCACAGCTCAGAGCCCTGTCTGTCACTCAGGTACCTGTCACTCGGGTACATATGCTGCCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCCCCAGATGCATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATTCTGGCTGGCAGTTGTaGAACAAGACCTTGGATTTC | + |
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Preference number: 3 (lower is better) Translates to: LCPRCMPGTRRGQKRVSDSGWQL*NKTLDF Trigger: GAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGA...ATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATGCATCTGGGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 72 bp | AGCCAACCATGGCGGAACAGAGTGTCAGGACCTGTTTaGAATGTATGCCTTGGTCTCCCTGCACTGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQPWRNRVSGPV*NVCLGLPALPP Trigger: TGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTCTGTTCCGCCATGGTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR CCA 72 bp | TATAGCTGGGGACACCTGCCACAGAGAGCAGGGGCCTaGCCTAAATCCTTGCCAATGGGAAAGGCCAGATTT | + |
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Preference number: 3 (lower is better) Translates to: YSWGHLPQRAGA*PKSLPMGKARF Trigger: AAATCTGGCCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTGGCAGGTGTCCCCAGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGCAGAGAGTCTGAGATGTCAGTTCAGGTCAGGAGCCAGGCCAGCTGCTCAATTTGGAATGTATGCCTaGGTCTCCCTGCACTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LAESLRCQFRSGARPAAQFGMYA*VSLHCL Trigger: GAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAA...TTGAGCAGCTGGCCTGGCTCCTGACCTGAACTGACATCTCAGACTCTCTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 72 bp | AGACCTTGGATTTCCAGCAGACTCTTGCAGAGAGTCTaGGATGTCAGTTCAGGTCAGGAGCCAGGCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: RPWISSRLLQRV*DVSSGQEPGQL Trigger: CAGCTGGCCTGGCTCCTGACCTGAACTGACATCTCAGACTCTCTGCAAGAGTCTGCTGGAAATCCAAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 72 bp | CACACCCTTGCCCACACCCATCTGGCTGGCAGTTGTTaGACAAGACCTTGGATTTCCAGCAGACTCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: HTLAHTHLAGSC*TRPWISSRLLQ Trigger: CTGCAAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGGCAAGGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR TCA 72 bp | CAGAGGCCATGTGATCTCTTTGAAGTGCCAAGCCAGTaGCTTAGGCTCCATCACTGTTGCTGGGAACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QRPCDLFEVPSQ*LRLHHCCWEPP Trigger: GGGAGGTTCCCAGCAACAGTGATGGAGCCTAAGTCACTGGCTTGGCACTTCAAAGAGATCACATGGCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR GCA 72 bp | TGGCGGAACAGAGTGTCAGGACCTGTTTGGAATGTATaGCTTGGTCTCCCTGCACTGCCTCCAAAGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: WRNRVSGPVWNV*LGLPALPPKSS Trigger: TGAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTCTGTTCCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| 3UTR GCA 72 bp | ACCTGCCACAGAGAGCAGGGGCCTGGCCTAAATCCTTaGCAATGGGAAAGGCCAGATTTGATGCCAGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: TCHREQGPGLNP*QWERPDLMPDL Trigger: TAGATCTGGCATCAAATCTGGCCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTGGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CCA 72 bp | ATACAGGGGAAATCCATGGGGCAGGGTTACCCAAGATaGTTATCAGGGTCCGGAAGTCCTGCACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: IQGKSMGQGYPR*LSGSGSPAHTH Trigger: GTGTGTGTGTGCAGGACTTCCGGACCCTGATAACCATCTTGGGTAACCCTGCCCCATGGATTTCCCCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | CCACCACTCTCCAATATGGTCCTCTTCTCTGAACCCTaGCCCCGAGCTGGAGGAAATACAGGGGAAATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PPLSNMVLFSEP*PRAGGNTGEIH Trigger: ATGGATTTCCCCTGTATTTCCTCCAGCTCGGGGTCAGGGTTCAGAGAAGAGGACCATATTGGAGAGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CCA 72 bp | TCCATCACTGTTGCTGGGAACCTCCCTGGTCCCCATTaGCATCCTAACAGCAGATGCTTTTCTTGGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SITVAGNLPGPH*HPNSRCFSWSG Trigger: TCCAGACCAAGAAAAGCATCTGCTGTTAGGATGCCAATGGGGACCAGGGAGGTTCCCAGCAACAGTGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CCA 72 bp | CACAGAGAGCAGGGGCCTGGCCTAAATCCTTGCCAATaGGAAAGGCCAGATTTGATGCCAGATCTAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HREQGPGLNPCQ*ERPDLMPDLAR Trigger: TCTTGCTAGATCTGGCATCAAATCTGGCCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | GGCAGATCTTGGCACAGTTCACTTCCCATGTTGCTTTaGTCCCAAAGTCCAAATGACCCATGGAGTCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GRSWHSSLPMLL*SQSPNDPWSLG Trigger: GCCCAGACTCCATGGGTCATTTGGACTTTGGGATCAAAGCAACATGGGAAGTGAACTGTGCCAAGATCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR GCA 72 bp | AAAAGGGAATTAGAAACGGTTATGAGCTGCCATGGGTaGTGGGAATCAAACCCGGGTCCTCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KRELETVMSCHG*WESNPGPLEEQ Trigger: CTGCTCTTCCAGAGGACCCGGGTTTGATTCCCAGCACCCATGGCAGCTCATAACCGTTTCTAATTCCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | GAGCCGTTTCCTGACACTGAGGAAAAGCCCCTCTGGTaGACACAGCATCCTTTCTCCAGATTCTTTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: EPFPDTEEKPLW*TQHPFSRFFEM Trigger: CATCTCAAAGAATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGTCAGGAAACGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | AATAGGAGTTGGGTAGGAGAGAGACCCCCTGTGGGGTaGCTGTCTAAGGACAATTCAAATAAATGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NRSWVGERPPVG*LSKDNSNKCPA Trigger: GGCTGGGCATTTATTTGAATTGTCCTTAGACAGTCACCCCACAGGGGGTCTCTCTCCTACCCAACTCCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR GCA 72 bp | AGACAGGCAGATCTTGGCACAGTTCACTTCCCATGTTaGTTTGATCCCAAAGTCCAAATGACCCATGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RQADLGTVHFPC*FDPKVQMTHGV Trigger: GACTCCATGGGTCATTTGGACTTTGGGATCAAAGCAACATGGGAAGTGAACTGTGCCAAGATCTGCCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR GCA 72 bp | GTTGTTGAACAAGACCTTGGATTTCCAGCAGACTCTTaGAGAGAGTCTGAGATGTCAGTTCAGGTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVEQDLGFPADS*RESEMSVQVRS Trigger: GCTCCTGACCTGAACTGACATCTCAGACTCTCTGCAAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATGCCCAGCCCAAAGTCACAAAGAAATGGAGCTGTTCAACTCAAGAGCTCAGCCATCTGGCTGGCAGTaGTTGAACAAGACCTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KCPAQSHKEMELFNSRAQPSGWQ*LNKTLD Trigger: ATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGG...CTGAGCTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTTGGGCTGGGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGAATGCACTAGAACAAAGTATAAGGCACCCTGTCTTGGCACACCCTTGCATTCAAAAGGTGGTCTaGTTGTCACTGAAAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PWNALEQSIRHPVLAHPCIQKVV*LSLKGS Trigger: GGAACCTTTCAGTGACAACAAGACCACCTTTTGAAT...GCAAGGGTGTGCCAAGACAGGGTGCCTTATACTTTGTTCTAGTGCATTCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | CTCCTAACACACCAGGCCAGCCAAAAGGTTCCATCATaGGCACAGAATCAATTAGTAATGTCTGCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLTHQASQKVPS*AQNQLVMSAWD Trigger: GTCCCATGCAGACATTACTAATTGATTCTGTGCTCATGATGGAACCTTTTGGCTGGCCTGGTGTGTTAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR GCA 72 bp | GACCTGTTTGGAATGTATGCCTTGGTCTCCCTGCACTaGCTCCAAAGAGCTCACTTAAAGAACTTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLFGMYALVSLH*LQRAHLKNFLK Trigger: TTTGAGGAAGTTCTTTAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | GAATTCTACTGCTACATGCGTGCTGCAATTGATTGGTaGTGCCTACCATGGTCAGGGATATTCCCCATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EFYCYMRAAIDW*CLPWSGIFPID Trigger: ATCTATGGGGAATATCCCTGACCATGGTAGGCATCACCAATCAATTGCAGCACGCATGTAGCAGTAGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | GTGGTCTTGTTGTCACTGAAAGGTTCCTTAGACCCATaGAGAATTCCATCCAGGAAAAGACAGGCAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VVLLSLKGSLDP*RIPSRKRQADL Trigger: AAGATCTGCCTGTCTTTTCCTGGATGGAATTCTTCATGGGTCTAAGGAACCTTTCAGTGACAACAAGACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | TTTAATACTGGCTTTGACATATGGGATTCCAGGTGCTaGAGCCCTGAAACACCTTGGAATGCACTAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: FNTGFDIWDSRC*SPETPWNALEQ Trigger: TTGTTCTAGTGCATTCCAAGGTGTTTCAGGGCTTCAGCACCTGGAATCCCATATGTCAAAGCCAGTATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR TCA 72 bp | CCCCATAGATCATCTATAATGCTAATCACTTTCTCCTaGAGCAGAAAGGGAGGCCCTCAGAACTTTAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PHRSSIMLITFS*SRKGGPQNFKN Trigger: ATTTTTAAAGTTCTGAGGGCCTCCCTTTCTGCTTCAGGAGAAAGTGATTAGCATTATAGATGATCTATGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR GCA 72 bp | GGTTCCATCATGAGCACAGAATCAATTAGTAATGTCTaGATGGGACACTATGTTGAATTCTACTGCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: GSIMSTESISNV*MGHYVEFYCYM Trigger: CATGTAGCAGTAGAATTCAACATAGTGTCCCATGCAGACATTACTAATTGATTCTGTGCTCATGATGGAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCCCAGATGCATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATCAAGGATGCTGGGAATaGTCCAGAAAGCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCPRCMPGTRRGQKRVSDQGCWE*SRKHGW Trigger: CCACCCATGCTTTCTGGATCATTCCCAGCATCCTTG...ATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATGCATCTGGGGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTGCCGTCACGTATGTCTGTGCCCCAGATGCATGCCTGGCACCCGCAGCGTGTTCATACTCAGTaGGCTGGTACCTCTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SALPSRMSVPQMHAWHPQRVHTQ*AGTSCA Trigger: CGCACAAGAGGTACCAGCCCACTGAGTATGAACACG...CTGCGGGTGCCAGGCATGCATCTGGGGCACAGACATACGTGACGGCAAAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | GACACCTGCCACAGAGAGCAGGGGCCTGGCCTAAATCCTTGCCAATGGGAAAGGTCATCAGCTCCCAGATaGCATCAGTGTTGGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DTCHREQGPGLNPCQWERSSAPR*HQCWAW Trigger: CCATGCCCAACACTGATGGCATCTGGGAGCTGATGA...CCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTGGCAGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | GAGCCAACCATGGCGGAACAGAGTGTCAGGACCTGTTaGGAATGTATGCCTTGGTCTCCCTGCACTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPTMAEQSVRTC*ECMPWSPCTAS Trigger: GGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTCTGTTCCGCCATGGTTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCAGGTATCAGCATCTTCATCCCAGATCTCAGCTCCTCTAGAACCAAGAGCGGCTGGTACCTCTTGTaGGCCGGGACTCGGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: WPGISIFIPDLSSSRTKSGWYLL*AGTRSF Trigger: GAATGACCGAGTCCCGGCGCACAAGAGGTACCAGCC...GCTCTTGGTTCTAGAGGAGCTGAGATCTGGGATGAAGATGCTGATACCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | CACCTGCCACAGAGAGCAGGGGCCTGGCCTAAATCCTaGCCAATGGGAAAGGCCAGATTTGATGCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPQRAGAWPKS*PMGKARFDARS Trigger: AGATCTGGCATCAAATCTGGCCTTTCCCATTGGCAAGGATTTAGGCCAGGCCCCTGCTCTCTGTGGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATCTCCTGAAAAGGGAAGAGGTACCTCCAGATaGCATAGTAGTGGGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAWHPQRPKEGVRSPEKGRGTSR*HSSGYQ Trigger: CTGGTACCCACTACTATGCCATCTGGAGGTACCTCT...TCCCTTTTCAGGAGATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | GCACACCCTTGCCCACACCCATCTGGCTGGCAGTTGTaGAACAAGACCTTGGATTTCCAGCAGACTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPCPHPSGWQL*NKTLDFQQTLA Trigger: TGCAAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGGCAAGGGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR TCA 90 bp | ACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATTCTTTGTACCGATGGAGGCCATaGTCCACACCAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRKSPSGEHSILSPDSLYRWRP*STPASA Trigger: TGCGCTGGCTGGTGTGGATCATGGCCTCCATCGGTA...CAAAGAATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATTCATACTCAGTGGGCTaGTACCTCTTGTGCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLRKSPSGEHSILSPDSYSVG*YLLCAG Trigger: CCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGA...ATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGAACCTCCCTGGTCCCCATTGGCATCCTAACAGCAGATGCTTTTCTTGGTACAGGAAGTAGAGGTTaGAGCTGCCAAGGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTSLVPIGILTADAFLGTGSRG*SCQGCW Trigger: CCAGCATCCTTGGCAGCTCCAACCTCTACTTCCTGT...ACCAAGAAAAGCATCTGCTGTTAGGATGCCAATGGGGACCAGGGAGGTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | TTGGCACACCCTTGCCCACACCCATCTGGCTGGCAGTaGTTGAACAAGACCTTGGATTTCCAGCAGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAHPCPHPSGWQ*LNKTLDFQQTL Trigger: AAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGGCAAGGGTGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | CCCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACGGTACCAGCACCAAATaGCACAAAGAGGTGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIWLAVVEQDLGFPADGTSTK*HKEVPD Trigger: ATCTGGCACCTCTTTGTGGCATTTGGTGCTGGTACC...GTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGAATCAAACCCGGGTCCTCTGGAAGAGCAGGAAGTGCTTTTAACTGCTCATAGGAGGCGGCAATaGAGAAGTAGATCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CWESNPGPLEEQEVLLTAHRRRQ*RSRSPS Trigger: GGATGGTGATCTACTTCTTCATTGCCGCCTCCTATG...AGCAGTTAAAAGCACTTCCTGCTCTTCCAGAGGACCCGGGTTTGATTCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | TTCCTGACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATAGATCCAGGCAGATATaGTCTCCCAGTCGTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLRKSPSGEHSILSPDRSRQI*SPSRHR Trigger: CCGATGACGACTGGGAGACCATATCTGCCTGGATCT...ATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGTCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | ACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATTCTTTGTGGTTTGCAGTGTGCTaGGCAGGTAGAGGTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLRKSPSGEHSILSPDSLWFAVC*AGRGTS Trigger: GGAGGTACCTCTACCTGCCCAGCACACTGCAAACCA...CAAAGAATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | GGAACAGAGTGTCAGGACCTGTTTGGAATGTATGCCTaGGTCTCCCTGCACTGCCTCCAAAGAGCTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTECQDLFGMYA*VSLHCLQRAHL Trigger: TAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACCAAGGCATACATTCCAAACAGGTCCTGACACTCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | CCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTaGGATTTCCAGCAGACTCTTGCAGAGAGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHPSGWQLLNKT*DFQQTLAESLR Trigger: TCTCAGACTCTCTGCAAGAGTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR TCA 90 bp | CCCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACGTGGCTCTTTTTCCATaGGACTGTGTGGAAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIWLAVVEQDLGFPADVALFP*DCVENG Trigger: ACCATTTTCCACACAGTCTCATGGAAAAAGAGCCAC...GTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | ACACTGAGGAAAAGCCCCTCTGGTGAACACAGCATCCTTTCTCCAGATTCTTTGATCATGTGCAGGCAGTaGTCTACCATCCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRKSPSGEHSILSPDSLIMCRQ*STILRW Trigger: CCACCTCAGGATGGTAGAGCACTGCCTGCACATGAT...CAAAGAATCTGGAGAAAGGATGCTGTGTTCACCAGAGGGGCTTTTCCTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| 3UTR CAA 72 bp | TCAACTCAAGAGCTCAGCAGAGGCCATGTGATCTCTTaGAAGTGCCAAGCCAGTGACTTAGGCTCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: STQELSRGHVIS*KCQASDLGSIT Trigger: AGTGATGGAGCCTAAGTCACTGGCTTGGCACTTCAAAGAGATCACATGGCCTCTGCTGAGCTCTTGAGTTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCCTGCACTGCCTCCAAAGAGCTCACTTAAAGAACTTCCTCAAATATGGAATGCCACAAAGAGGTaGCAGATGGCATGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPALPPKSSLKELPQIWNATKR*QMAWAK Trigger: CTTTGCCCATGCCATCTGGCACCTCTTTGTGGCATT...CCATATTTGAGGAAGTTCTTTAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAAAGACAGGCAGATCTTGGCACAGTTCACTTCCCATGTTGCTTTGATCTCCAGAAAGCATGGGTaGCACAGTTTGCTGCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGKDRQILAQFTSHVALISRKHG*HSLLRV Trigger: AACACGCAGCAAACTGTGCCACCCATGCTTTCTGGA...GATCAAAGCAACATGGGAAGTGAACTGTGCCAAGATCTGCCTGTCTTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAATCAAACCCGGGTCCTCTGGAAGAGCAGGAAGTGCTTTTAACTGCTTCTACCATCCTGAGGTaGCTCTTTTTCCATGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CWESNPGPLEEQEVLLTASTILR*LFFHET Trigger: AGTCTCATGGAAAAAGAGCCACCTCAGGATGGTAGA...AGCAGTTAAAAGCACTTCCTGCTCTTCCAGAGGACCCGGGTTTGATTCCCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAAGACAGGCAGATCTTGGCACAGTTCACTTCCCATGTTGCTTTGATCATGGGTGGCACAGTTTaGTGCGTGTTCATACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGKDRQILAQFTSHVALIMGGTV*CVFILS Trigger: ACTGAGTATGAACACGCAGCAAACTGTGCCACCCAT...GATCAAAGCAACATGGGAAGTGAACTGTGCCAAGATCTGCCTGTCTTTTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | AAATGCCCAGCCCAAAGTCACAAAGAAATGGAGCTGTTCAACTCAAGAGCTCAGATGATCCAGAAAGCATaGGTGGCACAGTTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCPAQSHKEMELFNSRAQMIQKA*VAQFAA Trigger: CGCAGCAAACTGTGCCACCCATGCTTTCTGGATCAT...CTGAGCTCTTGAGTTGAACAGCTCCATTTCTTTGTGACTTTGGGCTGGGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR GCA 90 bp | TATTTCTTTATCTTTATTTGTGTGAGTGCTTTGCCGTCACGTATGTCTGTGCCCCCTTGGTTTGCAGTGTaGTGGGCAGGTAGAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: YFFIFICVSALPSRMSVPPWFAV*WAGRGT Trigger: GGTACCTCTACCTGCCCAGCACACTGCAAACCAAGG...GGGCACAGACATACGTGACGGCAAAGCACTCACACAAATAAAGATAAAGAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTCCCTGCACTGCCTCCAAAGAGCTCACTTAAAGAACTTCCTCAAATATGGAGACTGTGTGGAAAATaGTGGATACCACAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLPALPPKSSLKELPQIWRLCGK*WIPQRG Trigger: GCCTCTTTGTGGTATCCACCATTTTCCACACAGTCT...CCATATTTGAGGAAGTTCTTTAAGTGAGCTCTTTGGAGGCAGTGCAGGGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTCAGGGATATTCCCCATAGATCATCTATAATGCTAATCACTTTCTCCTTCCATGAGACTGTGTaGAAAATGGTGGATACCACA | + |
|
Preference number: 4 (lower is better) Translates to: TMVRDIPHRSSIMLITFSFHETV*KMVDTT Trigger: TGTGGTATCCACCATTTTCCACACAGTCTCATGGAA...GGAGAAAGTGATTAGCATTATAGATGATCTATGGGGAATATCCCTGACCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCAGTCAGCAGCCACCACTCTCCAATATGGTCCTCTTCTCTGAACCCTGTGGGCTGGTACCTCTaGTGCGCCGGGACTCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PIPVSSHHSPIWSSSLNPVGWYL*CAGTRS Trigger: TGACCGAGTCCCGGCGCACAAGAGGTACCAGCCCAC...AGGGTTCAGAGAAGAGGACCATATTGGAGAGTGGTGGCTGCTGACTGGGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CCA 90 bp | CCACAAAGAGGCCACAGAGGCCAAGGCCGTAGATCCAGGCAGATATaGTCTCCCAGTCGTCATCGGACAGGAAGTAGAGGTTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PQRGHRGQGRRSRQI*SPSRHRTGSRGWSC Trigger: GCAGCTCCAACCTCTACTTCCTGTCCGATGACGACTGGGAGACCATATCTGCCTGGATCTACGGCCTTGGCCTCTGTGGCCTCTTTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS TCA 90 bp | GGCCCAGCTCCCGAAGGTTCAGCCAAGGAGCATAGGAGGCGGCAATaGAGAAGTAGATCACCATCCTGTCGATCATGTGCAGGCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GPAPEGSAKEHRRRQ*RSRSPSCRSCAGSA Trigger: AGCACTGCCTGCACATGATCGACAGGATGGTGATCTACTTCTTCATTGCCGCCTCCTATGCTCCTTGGCTGAACCTTCGGGAGCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS GCA 90 bp | AAGGATGCTGGGAATGATCCAGAAAGCATGGGTGGCACAGTTTGCTaGGTGTTCATACTCAGTGGGCTGGTACCTCTTGTGCGCCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: KDAGNDPESMGGTVC*VFILSGLVPLVRRD Trigger: GTCCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGAACACGCAGCAAACTGTGCCACCCATGCTTTCTGGATCATTCCCAGCATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS-3UTR CAA 90 bp | CATGCCTGGCACCCGCAGAGGCCAAAAGAGGGTGTCAGATCTCCTGAAAAGGGACATGGGTGGCACAGTTaGCTGCGTGTTCATACTCAG | + |
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Preference number: 5 (lower is better) Translates to: HAWHPQRPKEGVRSPEKGHGWHS*LRVHTQ Trigger: CTGAGTATGAACACGCAGCAAACTGTGCCACCCATG...TCCCTTTTCAGGAGATCTGACACCCTCTTTTGGCCTCTGCGGGTGCCAGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CCA 90 bp | AAAGCATGGGTGGCACAGTTTGCTGCGTGTTCATACTCAGTGGGCTaGTACCTCTTGTGCGCCGGGACTCGGTCATTCATAAACCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: KAWVAQFAACSYSVG*YLLCAGTRSFINLA Trigger: TGCAAGGTTTATGAATGACCGAGTCCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGAACACGCAGCAAACTGTGCCACCCATGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS TCA 90 bp | AGATCACCATCCTGTCGATCATGTGCAGGCAGTGCTCTACCATCCTaGGGTGGCTCTTTTTCCATGAGACTGTGTGGAAAATGGTGGATA | + |
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Preference number: 5 (lower is better) Translates to: RSPSCRSCAGSALPS*GGSFSMRLCGKWWI Trigger: TATCCACCATTTTCCACACAGTCTCATGGAAAAAGAGCCACCTCAGGATGGTAGAGCACTGCCTGCACATGATCGACAGGATGGTGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS-3UTR CAA 90 bp | CCCACACCCATCTGGCTGGCAGTTGTTGAACAAGACCTTGGATTTCCAGCAGACATAAACCTTGCATATTaGGTTTTCTGGAAATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PTPIWLAVVEQDLGFPADINLAY*VFWKSS Trigger: GCTGGATTTCCAGAAAACCAAATATGCAAGGTTTAT...GTCTGCTGGAAATCCAAGGTCTTGTTCAACAACTGCCAGCCAGATGGGTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CCA 72 bp | GGCCACAGAGGCCAAGGCCGTAGATCCAGGCAGATATaGTCTCCCAGTCGTCATCGGACAGGAAGTAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GHRGQGRRSRQI*SPSRHRTGSRG Trigger: ACCTCTACTTCCTGTCCGATGACGACTGGGAGACCATATCTGCCTGGATCTACGGCCTTGGCCTCTGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS TCA 72 bp | CCCGAAGGTTCAGCCAAGGAGCATAGGAGGCGGCAATaGAGAAGTAGATCACCATCCTGTCGATCATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PEGSAKEHRRRQ*RSRSPSCRSCA Trigger: TGCACATGATCGACAGGATGGTGATCTACTTCTTCATTGCCGCCTCCTATGCTCCTTGGCTGAACCTTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS GCA 72 bp | GCTGCGTGTTCATACTCAGTGGGCTGGTACCTCTTGTaGGCCGGGACTCGGTCATTCATAAACCTTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: AACSYSVGWYLL*AGTRSFINLAY Trigger: ATATGCAAGGTTTATGAATGACCGAGTCCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGAACACGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS GCA 72 bp | GCTGGGAATGATCCAGAAAGCATGGGTGGCACAGTTTaGTGCGTGTTCATACTCAGTGGGCTGGTACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AGNDPESMGGTV*CVFILSGLVPL Trigger: AAGAGGTACCAGCCCACTGAGTATGAACACGCAGCAAACTGTGCCACCCATGCTTTCTGGATCATTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CCA 72 bp | TTTGCAGTGTGCTGGGCAGGTAGAGGTACCTCCAGATaGCATAGTAGTGGGTACCAGCACCAAATGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: FAVCWAGRGTSR*HSSGYQHQMPQ Trigger: TTGTGGCATTTGGTGCTGGTACCCACTACTATGCCATCTGGAGGTACCTCTACCTGCCCAGCACACTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CAA 72 bp | TTTGCTGCGTGTTCATACTCAGTGGGCTGGTACCTCTaGTGCGCCGGGACTCGGTCATTCATAAACCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FAACSYSVGWYL*CAGTRSFINLA Trigger: TGCAAGGTTTATGAATGACCGAGTCCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGAACACGCAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS CAA 90 bp | GTGGCACAGTTTGCTGCGTGTTCATACTCAGTGGGCTGGTACCTCTaGTGCGCCGGGACTCGGTCATTCATAAACCTTGCATATTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VAQFAACSYSVGWYL*CAGTRSFINLAYLV Trigger: AACCAAATATGCAAGGTTTATGAATGACCGAGTCCCGGCGCACAAGAGGTACCAGCCCACTGAGTATGAACACGCAGCAAACTGTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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| CDS TCA 72 bp | GCAGTGCTCTACCATCCTGAGGTGGCTCTTTTTCCATaGGACTGTGTGGAAAATGGTGGATACCACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: AVLYHPEVALFP*DCVENGGYHKE Trigger: CTCTTTGTGGTATCCACCATTTTCCACACAGTCTCATGGAAAAAGAGCCACCTCAGGATGGTAGAGCACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037048.9 |
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